HEADER MOTOR PROTEIN 30-MAR-06 2GJG TITLE CRYSTAL STRUCTURE OF A PILZ-CONTAINING PROTEIN (PP4397) FROM TITLE 2 PSEUDOMONAS PUTIDA KT2440 AT 2.25 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PP4397; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: NP_746511.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PILZ-CONTAINING PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 2GJG 1 REMARK SEQADV LINK REVDAT 5 13-JUL-11 2GJG 1 VERSN REVDAT 4 28-JUL-10 2GJG 1 HEADER TITLE KEYWDS REVDAT 3 24-FEB-09 2GJG 1 VERSN REVDAT 2 31-OCT-06 2GJG 1 JRNL KEYWDS SOURCE TITLE REVDAT 2 2 1 REMARK REVDAT 1 25-APR-06 2GJG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN (NP_746511.1) FROM JRNL TITL 2 PSEUDOMONAS PUTIDA KT2440 AT 2.25 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 11212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 564 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 775 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.4110 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.5560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1948 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 33.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.85000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.416 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.274 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.634 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2022 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1810 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2729 ; 1.501 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4182 ; 0.823 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 252 ; 5.905 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;33.900 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 335 ;15.254 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.654 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 290 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2300 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 437 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 364 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1784 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 933 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1288 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 98 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.207 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 74 ; 0.254 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.178 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 0.710 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 508 ; 0.129 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1984 ; 1.051 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 829 ; 1.580 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 743 ; 2.447 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8838 38.6396 15.6758 REMARK 3 T TENSOR REMARK 3 T11: -0.1361 T22: -0.1578 REMARK 3 T33: -0.1192 T12: 0.0316 REMARK 3 T13: -0.0224 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 2.7451 L22: 1.8194 REMARK 3 L33: 2.2138 L12: -0.7583 REMARK 3 L13: -1.0808 L23: 0.6241 REMARK 3 S TENSOR REMARK 3 S11: -0.0193 S12: 0.2036 S13: -0.0462 REMARK 3 S21: -0.0149 S22: -0.0374 S23: 0.2130 REMARK 3 S31: -0.0025 S32: -0.1799 S33: 0.0567 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 247 REMARK 3 ORIGIN FOR THE GROUP (A): 47.1146 34.0825 -13.1528 REMARK 3 T TENSOR REMARK 3 T11: -0.1196 T22: -0.0893 REMARK 3 T33: -0.1223 T12: -0.0441 REMARK 3 T13: -0.0400 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 3.7601 L22: 2.2906 REMARK 3 L33: 2.9950 L12: 0.3279 REMARK 3 L13: -1.6785 L23: -0.5162 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.2707 S13: 0.1262 REMARK 3 S21: -0.0515 S22: 0.0739 S23: 0.1930 REMARK 3 S31: -0.0787 S32: -0.3162 S33: -0.1074 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 2.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION REMARK 3 DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE REMARK 3 RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING REMARK 3 POWER DUE TO PARTIAL S-MET INCORPORATION. REMARK 3 3.ELECTRON DENSITY MAP SUPPORTS THE CONFIGURATION OF RESIDUE 194 REMARK 3 WITH REMARK 3 RAMACHANDRAN OUTLIER IN THIS MODEL. REMARK 3 4.ETHYLENE GLYCOL MOLECULES FROM CRYSTALIZATION CONDITION ARE REMARK 3 BULIT IN THIS REMARK 3 MODEL. REMARK 3 5.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY REMARK 4 REMARK 4 2GJG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97941, 0.97879, 0.91162 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11812 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 28.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : 0.30000 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35.0% 2-PROPANOL, 5.0% PEG-1000, 0.1M REMARK 280 CITRATE PH 5.5 , VAPOR DIFFUSION,SITTING DROP,NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.61200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.40950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.61200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.40950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.22400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 3 CB CG OD1 ND2 REMARK 470 GLN A 9 OE1 NE2 REMARK 470 LEU A 18 CD1 CD2 REMARK 470 ILE A 35 CD1 REMARK 470 THR A 37 CG2 REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 ARG A 67 CD NE CZ NH1 NH2 REMARK 470 LYS A 99 NZ REMARK 470 GLU A 102 OE1 OE2 REMARK 470 GLN A 223 CD OE1 NE2 REMARK 470 LYS A 227 CE NZ REMARK 470 GLU A 229 CG CD OE1 OE2 REMARK 470 GLN A 234 CG CD OE1 NE2 REMARK 470 ARG A 237 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 238 CD OE1 OE2 REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 241 CZ NH1 NH2 REMARK 470 LYS A 244 CE NZ REMARK 470 ASP A 246 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 194 103.66 -19.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 250 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 360827 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. DBREF 2GJG A 1 247 UNP Q88EQ6 Q88EQ6_PSEPK 1 247 SEQADV 2GJG GLY A 0 UNP Q88EQ6 EXPRESSION TAG SEQADV 2GJG MSE A 1 UNP Q88EQ6 MET 1 MODIFIED RESIDUE SEQADV 2GJG MSE A 64 UNP Q88EQ6 MET 64 MODIFIED RESIDUE SEQADV 2GJG MSE A 151 UNP Q88EQ6 MET 151 MODIFIED RESIDUE SEQADV 2GJG MSE A 196 UNP Q88EQ6 MET 196 MODIFIED RESIDUE SEQRES 1 A 248 GLY MSE PHE ASN GLU SER ASP ALA PRO GLN PRO PRO LYS SEQRES 2 A 248 VAL LEU SER THR PRO LEU GLU ILE ALA ALA ASN LEU ARG SEQRES 3 A 248 GLN LEU GLN GLU SER HIS ASP PRO LEU ILE ILE THR PHE SEQRES 4 A 248 HIS ASP ARG SER HIS ARG PHE GLN SER TYR VAL VAL HIS SEQRES 5 A 248 VAL ASP ARG GLU SER ASN THR LEU ALA LEU ASP GLU MSE SEQRES 6 A 248 ILE PRO ARG ASP GLY GLU LYS PHE ILE GLU ASN GLY GLU SEQRES 7 A 248 HIS PHE ARG VAL GLU GLY PHE HIS ASP GLY VAL ARG ILE SEQRES 8 A 248 ALA TRP GLU CYS ASP HIS ALA LEU LYS ILE SER GLU VAL SEQRES 9 A 248 ASP GLY HIS ARG CYS TYR SER GLY PRO LEU PRO GLN GLU SEQRES 10 A 248 VAL THR TYR HIS GLN ARG ARG ASN ALA PHE ARG ALA ALA SEQRES 11 A 248 LEU LYS LEU SER GLN LEU VAL ASP ILE ILE LEU ASP GLY SEQRES 12 A 248 ALA HIS LEU LYS GLY ASN GLY ALA MSE ARG GLY LYS LEU SEQRES 13 A 248 LEU ASP ILE SER ALA THR GLY CYS LYS LEU ARG PHE GLU SEQRES 14 A 248 GLY ASN VAL GLU ASP ARG LEU GLN LEU GLY GLN VAL TYR SEQRES 15 A 248 GLU ARG PHE LYS ALA GLY ASN PRO LEU GLY LEU VAL ASP SEQRES 16 A 248 THR MSE VAL GLU LEU ARG HIS LEU HIS TYR GLU GLU ARG SEQRES 17 A 248 ILE ASN THR THR PHE ALA GLY VAL ARG PHE HIS ASN LEU SEQRES 18 A 248 SER GLY GLN ALA GLN ARG LYS ILE GLU SER PHE VAL TYR SEQRES 19 A 248 GLN LEU GLN ARG GLU ALA ARG ARG PHE ASP LYS ASP ASP SEQRES 20 A 248 TYR MODRES 2GJG MSE A 1 MET SELENOMETHIONINE MODRES 2GJG MSE A 64 MET SELENOMETHIONINE MODRES 2GJG MSE A 151 MET SELENOMETHIONINE MODRES 2GJG MSE A 196 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 64 8 HET MSE A 151 8 HET MSE A 196 8 HET EDO A 248 4 HET EDO A 249 4 HET EDO A 250 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 HOH *137(H2 O) HELIX 1 1 THR A 16 SER A 30 1 15 HELIX 2 2 PRO A 66 ASP A 68 5 3 HELIX 3 3 GLY A 69 ASN A 75 1 7 HELIX 4 4 ARG A 122 LEU A 130 1 9 HELIX 5 5 VAL A 171 LEU A 175 5 5 HELIX 6 6 GLU A 206 ILE A 208 5 3 HELIX 7 7 SER A 221 LYS A 244 1 24 SHEET 1 A 6 LYS A 12 LEU A 14 0 SHEET 2 A 6 VAL A 117 HIS A 120 -1 O VAL A 117 N LEU A 14 SHEET 3 A 6 VAL A 88 CYS A 94 -1 N ALA A 91 O THR A 118 SHEET 4 A 6 PHE A 79 HIS A 85 -1 N PHE A 79 O CYS A 94 SHEET 5 A 6 LEU A 34 PHE A 38 -1 N THR A 37 O ARG A 80 SHEET 6 A 6 PHE A 45 SER A 47 -1 O PHE A 45 N ILE A 36 SHEET 1 B 4 VAL A 49 ASP A 53 0 SHEET 2 B 4 THR A 58 ASP A 62 -1 O THR A 58 N ASP A 53 SHEET 3 B 4 HIS A 106 GLY A 111 -1 O GLY A 111 N LEU A 59 SHEET 4 B 4 LYS A 99 VAL A 103 -1 N LYS A 99 O SER A 110 SHEET 1 C 7 ASP A 137 ASP A 141 0 SHEET 2 C 7 MSE A 151 ILE A 158 -1 O MSE A 151 N LEU A 140 SHEET 3 C 7 GLY A 162 GLU A 168 -1 O LYS A 164 N LEU A 156 SHEET 4 C 7 THR A 210 HIS A 218 -1 O VAL A 215 N CYS A 163 SHEET 5 C 7 LEU A 192 GLU A 205 -1 N HIS A 203 O PHE A 212 SHEET 6 C 7 VAL A 180 ALA A 186 -1 N PHE A 184 O THR A 195 SHEET 7 C 7 ASP A 137 ASP A 141 -1 N ASP A 141 O ARG A 183 LINK C MSE A 1 N PHE A 2 1555 1555 1.33 LINK C GLU A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N ILE A 65 1555 1555 1.33 LINK C ALA A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N ARG A 152 1555 1555 1.33 LINK C THR A 195 N MSE A 196 1555 1555 1.33 LINK C MSE A 196 N VAL A 197 1555 1555 1.32 CISPEP 1 ILE A 65 PRO A 66 0 -1.51 CISPEP 2 ASN A 188 PRO A 189 0 4.73 SITE 1 AC1 6 LEU A 59 LEU A 61 TRP A 92 LEU A 98 SITE 2 AC1 6 HOH A 273 HOH A 278 SITE 1 AC2 6 GLU A 116 HIS A 203 TYR A 204 GLU A 205 SITE 2 AC2 6 GLU A 206 HOH A 269 SITE 1 AC3 6 PRO A 8 GLN A 9 HIS A 120 GLN A 121 SITE 2 AC3 6 ARG A 122 ALA A 125 CRYST1 89.224 48.819 57.476 90.00 93.41 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011210 0.000000 0.000670 0.00000 SCALE2 0.000000 0.020480 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017430 0.00000 HETATM 1 N MSE A 1 17.737 28.461 -13.987 1.00 39.67 N HETATM 2 CA MSE A 1 17.224 27.056 -14.064 1.00 39.65 C HETATM 3 C MSE A 1 17.841 26.183 -12.977 1.00 39.27 C HETATM 4 O MSE A 1 17.230 25.219 -12.519 1.00 39.26 O HETATM 5 CB MSE A 1 17.523 26.448 -15.428 1.00 39.95 C HETATM 6 CG MSE A 1 16.917 27.202 -16.599 1.00 40.86 C HETATM 7 SE MSE A 1 14.970 27.335 -16.582 0.75 43.39 SE HETATM 8 CE MSE A 1 14.705 28.960 -15.442 1.00 42.11 C