HEADER LYASE 09-APR-06 2GN8 TITLE CRYSTAL STRUCTURE OF UDP-GLCNAC INVERTING 4,6-DEHYDRATASE IN COMPLEX TITLE 2 WITH NADP AND UDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-GLCNAC C6 DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FLAA1 PROTEIN; COMPND 5 EC: 4.2.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 GENE: HP0840; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET23 DERIVATIVE KEYWDS ROSSMANN FOLD, TYK TRIAD, SDR, ENZYME, DEHYDRATASE, UDP-GLCNAC, NADP, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR N.ISHIYAMA,C.CREUZENET,J.S.LAM,A.M.BERGHUIS REVDAT 6 30-AUG-23 2GN8 1 REMARK SEQADV REVDAT 5 18-OCT-17 2GN8 1 REMARK REVDAT 4 13-JUL-11 2GN8 1 VERSN REVDAT 3 24-FEB-09 2GN8 1 VERSN REVDAT 2 05-SEP-06 2GN8 1 JRNL REVDAT 1 09-MAY-06 2GN8 0 JRNL AUTH N.ISHIYAMA,C.CREUZENET,W.L.MILLER,M.DEMENDI,E.M.ANDERSON, JRNL AUTH 2 G.HARAUZ,J.S.LAM,A.M.BERGHUIS JRNL TITL STRUCTURAL STUDIES OF FLAA1 FROM HELICOBACTER PYLORI REVEAL JRNL TITL 2 THE MECHANISM FOR INVERTING 4,6-DEHYDRATASE ACTIVITY. JRNL REF J.BIOL.CHEM. V. 281 24489 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16651261 JRNL DOI 10.1074/JBC.M602393200 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 43145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 4309 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 707 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 90 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5163 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 158 REMARK 3 SOLVENT ATOMS : 288 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.72200 REMARK 3 B22 (A**2) : -1.72200 REMARK 3 B33 (A**2) : 3.44400 REMARK 3 B12 (A**2) : -1.82900 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.14 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.387 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.246 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.019 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.888 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 55.69 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : NAP_NI.PAR REMARK 3 PARAMETER FILE 3 : UDP_NI.PAR REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : MES_NI.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GN8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1SB8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (V/V) PEG-200, 100 MM MES, 5% REMARK 280 (V/W) PEG-3000, 4% (V/V) ACETONE, PH 6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.89500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.89500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.89500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HEXAMER GENERATED FROM THE TWO REMARK 300 PROTOMERS IN THE ASYMMETRIC UNIT BY THE OPERATIONS:(-Y,X-Y,Z) AND (- REMARK 300 X+Y,-X,Z) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 111.05600 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 55.52800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 96.17732 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASN A 3 REMARK 465 HIS A 4 REMARK 465 GLN A 5 REMARK 465 ASN A 6 REMARK 465 MET B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ASN B 3 REMARK 465 HIS B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 9 100.11 -44.11 REMARK 500 PHE A 56 67.87 -108.29 REMARK 500 SER A 130 -161.28 -113.20 REMARK 500 LYS A 159 49.57 -145.94 REMARK 500 SER A 161 -81.66 -59.06 REMARK 500 SER A 180 -175.98 -57.27 REMARK 500 LYS A 192 88.92 -56.60 REMARK 500 SER A 194 -12.93 -169.34 REMARK 500 THR A 199 -74.00 -94.97 REMARK 500 ASP A 200 -155.13 -115.53 REMARK 500 ILE A 201 -34.01 -132.60 REMARK 500 ALA A 245 -53.66 -139.62 REMARK 500 ALA A 247 74.44 -176.44 REMARK 500 PRO A 294 170.30 -53.75 REMARK 500 ASN A 321 36.38 -85.05 REMARK 500 GLN A 322 135.74 -176.46 REMARK 500 LEU A 332 -62.30 -128.81 REMARK 500 ASN B 6 -156.87 -151.91 REMARK 500 ASN B 35 40.90 -106.49 REMARK 500 ASN B 57 46.73 35.92 REMARK 500 SER B 130 -167.94 -118.32 REMARK 500 LYS B 159 86.03 -153.05 REMARK 500 ARG B 178 -35.23 -39.28 REMARK 500 SER B 180 -174.18 -53.07 REMARK 500 ASN B 191 35.55 -86.90 REMARK 500 LYS B 192 83.04 58.04 REMARK 500 GLU B 195 131.06 -175.05 REMARK 500 THR B 199 -65.83 -104.53 REMARK 500 ARG B 202 8.18 -60.25 REMARK 500 ALA B 247 68.62 -178.54 REMARK 500 PRO B 311 -1.30 -54.36 REMARK 500 GLU B 314 111.58 -163.38 REMARK 500 ASP B 327 -72.01 -74.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP B 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 337 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GN4 RELATED DB: PDB REMARK 900 RELATED ID: 2GN9 RELATED DB: PDB REMARK 900 RELATED ID: 2GNA RELATED DB: PDB REMARK 900 RELATED ID: 2GN6 RELATED DB: PDB DBREF 2GN8 A 1 333 UNP O25511 O25511_HELPY 1 333 DBREF 2GN8 B 1 333 UNP O25511 O25511_HELPY 1 333 SEQADV 2GN8 MET A -10 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 HIS A -9 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS A -8 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS A -7 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS A -6 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS A -5 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS A -4 UNP O25511 EXPRESSION TAG SEQADV 2GN8 GLY A -3 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 SER A -2 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 MET A -1 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 SER A 0 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 MET B -10 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 HIS B -9 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS B -8 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS B -7 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS B -6 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS B -5 UNP O25511 EXPRESSION TAG SEQADV 2GN8 HIS B -4 UNP O25511 EXPRESSION TAG SEQADV 2GN8 GLY B -3 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 SER B -2 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 MET B -1 UNP O25511 CLONING ARTIFACT SEQADV 2GN8 SER B 0 UNP O25511 CLONING ARTIFACT SEQRES 1 A 344 MET HIS HIS HIS HIS HIS HIS GLY SER MET SER MET PRO SEQRES 2 A 344 ASN HIS GLN ASN MET LEU ASP ASN GLN THR ILE LEU ILE SEQRES 3 A 344 THR GLY GLY THR GLY SER PHE GLY LYS CYS PHE VAL ARG SEQRES 4 A 344 LYS VAL LEU ASP THR THR ASN ALA LYS LYS ILE ILE VAL SEQRES 5 A 344 TYR SER ARG ASP GLU LEU LYS GLN SER GLU MET ALA MET SEQRES 6 A 344 GLU PHE ASN ASP PRO ARG MET ARG PHE PHE ILE GLY ASP SEQRES 7 A 344 VAL ARG ASP LEU GLU ARG LEU ASN TYR ALA LEU GLU GLY SEQRES 8 A 344 VAL ASP ILE CYS ILE HIS ALA ALA ALA LEU LYS HIS VAL SEQRES 9 A 344 PRO ILE ALA GLU TYR ASN PRO LEU GLU CYS ILE LYS THR SEQRES 10 A 344 ASN ILE MET GLY ALA SER ASN VAL ILE ASN ALA CYS LEU SEQRES 11 A 344 LYS ASN ALA ILE SER GLN VAL ILE ALA LEU SER THR ASP SEQRES 12 A 344 LYS ALA ALA ASN PRO ILE ASN LEU TYR GLY ALA THR LYS SEQRES 13 A 344 LEU CYS SER ASP LYS LEU PHE VAL SER ALA ASN ASN PHE SEQRES 14 A 344 LYS GLY SER SER GLN THR GLN PHE SER VAL VAL ARG TYR SEQRES 15 A 344 GLY ASN VAL VAL GLY SER ARG GLY SER VAL VAL PRO PHE SEQRES 16 A 344 PHE LYS LYS LEU VAL GLN ASN LYS ALA SER GLU ILE PRO SEQRES 17 A 344 ILE THR ASP ILE ARG MET THR ARG PHE TRP ILE THR LEU SEQRES 18 A 344 ASP GLU GLY VAL SER PHE VAL LEU LYS SER LEU LYS ARG SEQRES 19 A 344 MET HIS GLY GLY GLU ILE PHE VAL PRO LYS ILE PRO SER SEQRES 20 A 344 MET LYS MET THR ASP LEU ALA LYS ALA LEU ALA PRO ASN SEQRES 21 A 344 THR PRO THR LYS ILE ILE GLY ILE ARG PRO GLY GLU LYS SEQRES 22 A 344 LEU HIS GLU VAL MET ILE PRO LYS ASP GLU SER HIS LEU SEQRES 23 A 344 ALA LEU GLU PHE GLU ASP PHE PHE ILE ILE GLN PRO THR SEQRES 24 A 344 ILE SER PHE GLN THR PRO LYS ASP TYR THR LEU THR LYS SEQRES 25 A 344 LEU HIS GLU LYS GLY GLN LYS VAL ALA PRO ASP PHE GLU SEQRES 26 A 344 TYR SER SER HIS ASN ASN ASN GLN TRP LEU GLU PRO ASP SEQRES 27 A 344 ASP LEU LEU LYS LEU LEU SEQRES 1 B 344 MET HIS HIS HIS HIS HIS HIS GLY SER MET SER MET PRO SEQRES 2 B 344 ASN HIS GLN ASN MET LEU ASP ASN GLN THR ILE LEU ILE SEQRES 3 B 344 THR GLY GLY THR GLY SER PHE GLY LYS CYS PHE VAL ARG SEQRES 4 B 344 LYS VAL LEU ASP THR THR ASN ALA LYS LYS ILE ILE VAL SEQRES 5 B 344 TYR SER ARG ASP GLU LEU LYS GLN SER GLU MET ALA MET SEQRES 6 B 344 GLU PHE ASN ASP PRO ARG MET ARG PHE PHE ILE GLY ASP SEQRES 7 B 344 VAL ARG ASP LEU GLU ARG LEU ASN TYR ALA LEU GLU GLY SEQRES 8 B 344 VAL ASP ILE CYS ILE HIS ALA ALA ALA LEU LYS HIS VAL SEQRES 9 B 344 PRO ILE ALA GLU TYR ASN PRO LEU GLU CYS ILE LYS THR SEQRES 10 B 344 ASN ILE MET GLY ALA SER ASN VAL ILE ASN ALA CYS LEU SEQRES 11 B 344 LYS ASN ALA ILE SER GLN VAL ILE ALA LEU SER THR ASP SEQRES 12 B 344 LYS ALA ALA ASN PRO ILE ASN LEU TYR GLY ALA THR LYS SEQRES 13 B 344 LEU CYS SER ASP LYS LEU PHE VAL SER ALA ASN ASN PHE SEQRES 14 B 344 LYS GLY SER SER GLN THR GLN PHE SER VAL VAL ARG TYR SEQRES 15 B 344 GLY ASN VAL VAL GLY SER ARG GLY SER VAL VAL PRO PHE SEQRES 16 B 344 PHE LYS LYS LEU VAL GLN ASN LYS ALA SER GLU ILE PRO SEQRES 17 B 344 ILE THR ASP ILE ARG MET THR ARG PHE TRP ILE THR LEU SEQRES 18 B 344 ASP GLU GLY VAL SER PHE VAL LEU LYS SER LEU LYS ARG SEQRES 19 B 344 MET HIS GLY GLY GLU ILE PHE VAL PRO LYS ILE PRO SER SEQRES 20 B 344 MET LYS MET THR ASP LEU ALA LYS ALA LEU ALA PRO ASN SEQRES 21 B 344 THR PRO THR LYS ILE ILE GLY ILE ARG PRO GLY GLU LYS SEQRES 22 B 344 LEU HIS GLU VAL MET ILE PRO LYS ASP GLU SER HIS LEU SEQRES 23 B 344 ALA LEU GLU PHE GLU ASP PHE PHE ILE ILE GLN PRO THR SEQRES 24 B 344 ILE SER PHE GLN THR PRO LYS ASP TYR THR LEU THR LYS SEQRES 25 B 344 LEU HIS GLU LYS GLY GLN LYS VAL ALA PRO ASP PHE GLU SEQRES 26 B 344 TYR SER SER HIS ASN ASN ASN GLN TRP LEU GLU PRO ASP SEQRES 27 B 344 ASP LEU LEU LYS LEU LEU HET NAP A 334 48 HET UDP A 335 25 HET MES A 337 12 HET NAP B 334 48 HET UDP B 335 25 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 UDP 2(C9 H14 N2 O12 P2) FORMUL 5 MES C6 H13 N O4 S FORMUL 8 HOH *288(H2 O) HELIX 1 1 GLY A 20 THR A 34 1 15 HELIX 2 2 ASP A 45 PHE A 56 1 12 HELIX 3 3 ASP A 70 LEU A 78 1 9 HELIX 4 4 HIS A 92 ASN A 99 1 8 HELIX 5 5 ASN A 99 ASN A 121 1 23 HELIX 6 6 THR A 131 ALA A 135 5 5 HELIX 7 7 ASN A 139 ALA A 155 1 17 HELIX 8 8 ASN A 156 PHE A 158 5 3 HELIX 9 9 VAL A 181 GLN A 190 1 10 HELIX 10 10 THR A 209 MET A 224 1 16 HELIX 11 11 LEU A 242 ALA A 247 1 6 HELIX 12 12 PRO A 269 HIS A 274 5 6 HELIX 13 13 GLY B 20 THR B 34 1 15 HELIX 14 14 ASP B 45 ASN B 57 1 13 HELIX 15 15 ASP B 70 LEU B 78 1 9 HELIX 16 16 HIS B 92 ASN B 99 1 8 HELIX 17 17 ASN B 99 ASN B 121 1 23 HELIX 18 18 LYS B 133 ALA B 135 5 3 HELIX 19 19 ASN B 139 ALA B 155 1 17 HELIX 20 20 VAL B 181 ASN B 191 1 11 HELIX 21 21 THR B 209 MET B 224 1 16 HELIX 22 22 LYS B 238 ALA B 245 1 8 HELIX 23 23 PRO B 269 HIS B 274 5 6 HELIX 24 24 GLU B 325 LYS B 331 1 7 SHEET 1 A10 MET A 61 ILE A 65 0 SHEET 2 A10 LYS A 38 SER A 43 1 N VAL A 41 O PHE A 64 SHEET 3 A10 THR A 12 THR A 16 1 N ILE A 13 O ILE A 40 SHEET 4 A10 ILE A 83 HIS A 86 1 O ILE A 85 N LEU A 14 SHEET 5 A10 GLN A 125 LEU A 129 1 O ILE A 127 N HIS A 86 SHEET 6 A10 GLN A 165 VAL A 169 1 O SER A 167 N VAL A 126 SHEET 7 A10 ILE A 229 PRO A 232 1 O PHE A 230 N VAL A 168 SHEET 8 A10 PHE A 282 ILE A 285 -1 O PHE A 283 N VAL A 231 SHEET 9 A10 ALA A 276 GLU A 278 -1 N LEU A 277 O ILE A 284 SHEET 10 A10 GLN A 307 LYS A 308 -1 O GLN A 307 N GLU A 278 SHEET 1 B 3 ASN A 173 VAL A 174 0 SHEET 2 B 3 THR A 204 ILE A 208 1 O ILE A 208 N ASN A 173 SHEET 3 B 3 SER A 236 LYS A 238 -1 O MET A 237 N ARG A 205 SHEET 1 C 2 VAL A 266 ILE A 268 0 SHEET 2 C 2 TYR A 315 SER A 316 -1 O TYR A 315 N MET A 267 SHEET 1 D10 MET B 61 ILE B 65 0 SHEET 2 D10 LYS B 38 SER B 43 1 N VAL B 41 O ARG B 62 SHEET 3 D10 THR B 12 THR B 16 1 N ILE B 13 O ILE B 40 SHEET 4 D10 ILE B 83 HIS B 86 1 O ILE B 85 N LEU B 14 SHEET 5 D10 GLN B 125 THR B 131 1 O ILE B 127 N HIS B 86 SHEET 6 D10 GLN B 165 TYR B 171 1 O VAL B 169 N SER B 130 SHEET 7 D10 ILE B 229 PRO B 232 1 O PHE B 230 N VAL B 168 SHEET 8 D10 PHE B 282 ILE B 285 -1 O PHE B 283 N VAL B 231 SHEET 9 D10 ALA B 276 GLU B 278 -1 N LEU B 277 O ILE B 284 SHEET 10 D10 GLN B 307 LYS B 308 -1 O GLN B 307 N GLU B 278 SHEET 1 E 3 ASN B 173 VAL B 174 0 SHEET 2 E 3 ARG B 205 ILE B 208 1 O ILE B 208 N ASN B 173 SHEET 3 E 3 SER B 236 MET B 237 -1 O MET B 237 N ARG B 205 SHEET 1 F 2 ILE B 196 ILE B 198 0 SHEET 2 F 2 THR B 252 ILE B 254 1 O LYS B 253 N ILE B 198 SHEET 1 G 2 VAL B 266 ILE B 268 0 SHEET 2 G 2 TYR B 315 SER B 316 -1 O TYR B 315 N MET B 267 SITE 1 AC1 34 GLY A 17 THR A 19 GLY A 20 SER A 21 SITE 2 AC1 34 PHE A 22 SER A 43 ARG A 44 ASP A 45 SITE 3 AC1 34 LYS A 48 GLY A 66 ASP A 67 VAL A 68 SITE 4 AC1 34 ALA A 87 ALA A 88 ALA A 89 LYS A 91 SITE 5 AC1 34 THR A 106 LEU A 129 SER A 130 LYS A 145 SITE 6 AC1 34 TYR A 171 GLY A 172 VAL A 174 SER A 177 SITE 7 AC1 34 ARG A 178 HOH A 342 HOH A 343 HOH A 363 SITE 8 AC1 34 HOH A 371 HOH A 381 HOH A 387 HOH A 444 SITE 9 AC1 34 HOH A 464 HOH B 431 SITE 1 AC2 13 LYS A 133 ASN A 173 SER A 180 VAL A 181 SITE 2 AC2 13 PRO A 197 ILE A 198 THR A 199 MET A 203 SITE 3 AC2 13 ARG A 205 MET A 239 ARG A 258 GLU A 261 SITE 4 AC2 13 HOH A 445 SITE 1 AC3 33 HOH A 393 GLY B 17 THR B 19 GLY B 20 SITE 2 AC3 33 SER B 21 PHE B 22 SER B 43 ARG B 44 SITE 3 AC3 33 ASP B 45 LYS B 48 GLY B 66 ASP B 67 SITE 4 AC3 33 VAL B 68 ALA B 87 ALA B 88 ALA B 89 SITE 5 AC3 33 LYS B 91 THR B 106 LEU B 129 SER B 130 SITE 6 AC3 33 TYR B 141 LYS B 145 TYR B 171 GLY B 172 SITE 7 AC3 33 VAL B 174 SER B 177 ARG B 178 HOH B 337 SITE 8 AC3 33 HOH B 346 HOH B 366 HOH B 370 HOH B 426 SITE 9 AC3 33 HOH B 430 SITE 1 AC4 12 LYS B 133 ASN B 173 SER B 180 VAL B 181 SITE 2 AC4 12 PRO B 197 ILE B 198 THR B 199 MET B 203 SITE 3 AC4 12 ARG B 205 ARG B 258 GLU B 261 HOH B 426 SITE 1 AC5 10 ARG A 73 TYR A 76 SER A 112 ASN A 116 SITE 2 AC5 10 SER A 154 HOH A 349 HOH A 458 ASN B 99 SITE 3 AC5 10 PRO B 100 LEU B 101 CRYST1 111.056 111.056 107.790 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009004 0.005199 0.000000 0.00000 SCALE2 0.000000 0.010397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009277 0.00000