data_2GQ5 # _entry.id 2GQ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GQ5 pdb_00002gq5 10.2210/pdb2gq5/pdb NDB UR0087 ? ? RCSB RCSB037417 ? ? WWPDB D_1000037417 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-27 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-03-28 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Structure summary' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' Other 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' diffrn_source 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site 8 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.value' 22 5 'Structure model' '_struct_conn.pdbx_dist_value' 23 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2GQ5 _pdbx_database_status.recvd_initial_deposition_date 2006-04-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2g32 'another crystal of similar type' unspecified PDB 2gpm 'another crystal of similar type' unspecified PDB 2gq4 'another crystal of similar type' unspecified PDB 2GQ6 . unspecified PDB 2GQ7 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rypniewski, W.' 1 'Vallazza, M.' 2 'Perbandt, M.' 3 'Klussmann, S.' 4 'Betzel, C.' 5 'Erdmann, V.A.' 6 # _citation.id primary _citation.title 'The first crystal structure of an RNA racemate.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 62 _citation.page_first 659 _citation.page_last 664 _citation.year 2006 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16699193 _citation.pdbx_database_id_DOI 10.1107/S090744490601359X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rypniewski, W.' 1 ? primary 'Vallazza, M.' 2 ? primary 'Perbandt, M.' 3 ? primary 'Klussmann, S.' 4 ? primary 'Delucas, L.J.' 5 ? primary 'Betzel, C.' 6 ? primary 'Erdmann, V.A.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3') ; 2597.601 2 ? ? ? ? 2 polymer syn ;RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3') ; 2517.553 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 6 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 225 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(0C)(0U)(0G)(0G)(0G)(0C)(0G)(0G)' CUGGGCGG K,M ? 2 polyribonucleotide no yes '(0C)(0C)(0G)(0C)(0C)(0U)(0G)(0G)' CCGCCUGG L,N ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 0C n 1 2 0U n 1 3 0G n 1 4 0G n 1 5 0G n 1 6 0C n 1 7 0G n 1 8 0G n 2 1 0C n 2 2 0C n 2 3 0G n 2 4 0C n 2 5 0C n 2 6 0U n 2 7 0G n 2 8 0G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? ;This sequence is a 'Spiegelmer' and occurs in 5S RNA FROM THERMUS FLAVUS ; 2 1 sample ? ? ? ? ? ;This sequence is a 'Spiegelmer' and occurs in 5S RNA FROM THERMUS FLAVUS ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0C 'L-RNA linking' . "L-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 0G 'L-RNA linking' . "L-GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 0U 'L-RNA linking' . "L-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 0C 1 79 79 0C 0C K . n A 1 2 0U 2 80 80 0U 0U K . n A 1 3 0G 3 81 81 0G 0G K . n A 1 4 0G 4 82 82 0G 0G K . n A 1 5 0G 5 83 83 0G 0G K . n A 1 6 0C 6 84 84 0C 0C K . n A 1 7 0G 7 85 85 0G 0G K . n A 1 8 0G 8 86 86 0G 0G K . n B 2 1 0C 1 90 90 0C 0C L . n B 2 2 0C 2 91 91 0C 0C L . n B 2 3 0G 3 92 92 0G 0G L . n B 2 4 0C 4 93 93 0C 0C L . n B 2 5 0C 5 94 94 0C 0C L . n B 2 6 0U 6 95 95 0U 0U L . n B 2 7 0G 7 96 96 0G 0G L . n B 2 8 0G 8 97 97 0G 0G L . n C 1 1 0C 1 79 79 0C 0C M . n C 1 2 0U 2 80 80 0U 0U M . n C 1 3 0G 3 81 81 0G 0G M . n C 1 4 0G 4 82 82 0G 0G M . n C 1 5 0G 5 83 83 0G 0G M . n C 1 6 0C 6 84 84 0C 0C M . n C 1 7 0G 7 85 85 0G 0G M . n C 1 8 0G 8 86 86 0G 0G M . n D 2 1 0C 1 90 90 0C 0C N . n D 2 2 0C 2 91 91 0C 0C N . n D 2 3 0G 3 92 92 0G 0G N . n D 2 4 0C 4 93 93 0C 0C N . n D 2 5 0C 5 94 94 0C 0C N . n D 2 6 0U 6 95 95 0U 0U N . n D 2 7 0G 7 96 96 0G 0G N . n D 2 8 0G 8 97 97 0G 0G N . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CA 1 310 310 CA CA L . F 3 CA 1 308 308 CA CA M . G 3 CA 1 311 311 CA CA M . H 3 CA 1 302 302 CA CA N . I 3 CA 1 304 304 CA CA N . J 3 CA 1 306 306 CA CA N . K 4 GOL 1 301 301 GOL GOL N . L 5 HOH 1 3 3 HOH HOH K . L 5 HOH 2 6 6 HOH HOH K . L 5 HOH 3 8 8 HOH HOH K . L 5 HOH 4 11 11 HOH HOH K . L 5 HOH 5 12 12 HOH HOH K . L 5 HOH 6 15 15 HOH HOH K . L 5 HOH 7 25 25 HOH HOH K . L 5 HOH 8 27 27 HOH HOH K . L 5 HOH 9 28 28 HOH HOH K . L 5 HOH 10 36 36 HOH HOH K . L 5 HOH 11 38 38 HOH HOH K . L 5 HOH 12 39 39 HOH HOH K . L 5 HOH 13 43 43 HOH HOH K . L 5 HOH 14 45 45 HOH HOH K . L 5 HOH 15 46 46 HOH HOH K . L 5 HOH 16 51 51 HOH HOH K . L 5 HOH 17 52 52 HOH HOH K . L 5 HOH 18 53 53 HOH HOH K . L 5 HOH 19 56 56 HOH HOH K . L 5 HOH 20 68 68 HOH HOH K . L 5 HOH 21 69 69 HOH HOH K . L 5 HOH 22 73 73 HOH HOH K . L 5 HOH 23 75 75 HOH HOH K . L 5 HOH 24 87 82 HOH HOH K . L 5 HOH 25 88 84 HOH HOH K . L 5 HOH 26 89 85 HOH HOH K . L 5 HOH 27 91 91 HOH HOH K . L 5 HOH 28 104 104 HOH HOH K . L 5 HOH 29 108 108 HOH HOH K . L 5 HOH 30 109 109 HOH HOH K . L 5 HOH 31 119 119 HOH HOH K . L 5 HOH 32 124 124 HOH HOH K . L 5 HOH 33 125 125 HOH HOH K . L 5 HOH 34 131 131 HOH HOH K . L 5 HOH 35 134 134 HOH HOH K . L 5 HOH 36 144 144 HOH HOH K . L 5 HOH 37 147 147 HOH HOH K . L 5 HOH 38 154 154 HOH HOH K . L 5 HOH 39 156 156 HOH HOH K . L 5 HOH 40 157 157 HOH HOH K . L 5 HOH 41 159 159 HOH HOH K . L 5 HOH 42 162 162 HOH HOH K . L 5 HOH 43 167 167 HOH HOH K . L 5 HOH 44 168 168 HOH HOH K . L 5 HOH 45 171 171 HOH HOH K . L 5 HOH 46 175 175 HOH HOH K . L 5 HOH 47 176 176 HOH HOH K . L 5 HOH 48 177 177 HOH HOH K . L 5 HOH 49 183 183 HOH HOH K . L 5 HOH 50 187 187 HOH HOH K . L 5 HOH 51 189 189 HOH HOH K . L 5 HOH 52 194 194 HOH HOH K . L 5 HOH 53 205 205 HOH HOH K . L 5 HOH 54 206 206 HOH HOH K . L 5 HOH 55 208 208 HOH HOH K . L 5 HOH 56 219 219 HOH HOH K . L 5 HOH 57 220 220 HOH HOH K . L 5 HOH 58 222 222 HOH HOH K . M 5 HOH 1 9 9 HOH HOH L . M 5 HOH 2 13 13 HOH HOH L . M 5 HOH 3 24 24 HOH HOH L . M 5 HOH 4 26 26 HOH HOH L . M 5 HOH 5 31 31 HOH HOH L . M 5 HOH 6 34 34 HOH HOH L . M 5 HOH 7 60 60 HOH HOH L . M 5 HOH 8 62 62 HOH HOH L . M 5 HOH 9 67 67 HOH HOH L . M 5 HOH 10 72 72 HOH HOH L . M 5 HOH 11 74 74 HOH HOH L . M 5 HOH 12 80 80 HOH HOH L . M 5 HOH 13 88 88 HOH HOH L . M 5 HOH 14 89 89 HOH HOH L . M 5 HOH 15 98 92 HOH HOH L . M 5 HOH 16 99 99 HOH HOH L . M 5 HOH 17 100 93 HOH HOH L . M 5 HOH 18 101 101 HOH HOH L . M 5 HOH 19 102 94 HOH HOH L . M 5 HOH 20 103 96 HOH HOH L . M 5 HOH 21 105 105 HOH HOH L . M 5 HOH 22 112 112 HOH HOH L . M 5 HOH 23 116 116 HOH HOH L . M 5 HOH 24 128 128 HOH HOH L . M 5 HOH 25 130 130 HOH HOH L . M 5 HOH 26 137 137 HOH HOH L . M 5 HOH 27 141 141 HOH HOH L . M 5 HOH 28 142 142 HOH HOH L . M 5 HOH 29 143 143 HOH HOH L . M 5 HOH 30 145 145 HOH HOH L . M 5 HOH 31 150 150 HOH HOH L . M 5 HOH 32 151 151 HOH HOH L . M 5 HOH 33 152 152 HOH HOH L . M 5 HOH 34 153 153 HOH HOH L . M 5 HOH 35 155 155 HOH HOH L . M 5 HOH 36 158 158 HOH HOH L . M 5 HOH 37 160 160 HOH HOH L . M 5 HOH 38 165 165 HOH HOH L . M 5 HOH 39 166 166 HOH HOH L . M 5 HOH 40 169 169 HOH HOH L . M 5 HOH 41 172 172 HOH HOH L . M 5 HOH 42 173 173 HOH HOH L . M 5 HOH 43 174 174 HOH HOH L . M 5 HOH 44 179 179 HOH HOH L . M 5 HOH 45 184 184 HOH HOH L . M 5 HOH 46 185 185 HOH HOH L . M 5 HOH 47 192 192 HOH HOH L . M 5 HOH 48 193 193 HOH HOH L . M 5 HOH 49 195 195 HOH HOH L . M 5 HOH 50 197 197 HOH HOH L . M 5 HOH 51 204 204 HOH HOH L . M 5 HOH 52 207 207 HOH HOH L . M 5 HOH 53 209 209 HOH HOH L . M 5 HOH 54 211 211 HOH HOH L . M 5 HOH 55 213 213 HOH HOH L . M 5 HOH 56 214 214 HOH HOH L . M 5 HOH 57 215 215 HOH HOH L . M 5 HOH 58 217 217 HOH HOH L . M 5 HOH 59 218 218 HOH HOH L . M 5 HOH 60 221 221 HOH HOH L . M 5 HOH 61 223 223 HOH HOH L . M 5 HOH 62 224 224 HOH HOH L . N 5 HOH 1 7 7 HOH HOH M . N 5 HOH 2 10 10 HOH HOH M . N 5 HOH 3 14 14 HOH HOH M . N 5 HOH 4 16 16 HOH HOH M . N 5 HOH 5 18 18 HOH HOH M . N 5 HOH 6 29 29 HOH HOH M . N 5 HOH 7 30 30 HOH HOH M . N 5 HOH 8 35 35 HOH HOH M . N 5 HOH 9 40 40 HOH HOH M . N 5 HOH 10 42 42 HOH HOH M . N 5 HOH 11 44 44 HOH HOH M . N 5 HOH 12 50 50 HOH HOH M . N 5 HOH 13 58 58 HOH HOH M . N 5 HOH 14 61 61 HOH HOH M . N 5 HOH 15 65 65 HOH HOH M . N 5 HOH 16 66 66 HOH HOH M . N 5 HOH 17 70 70 HOH HOH M . N 5 HOH 18 77 77 HOH HOH M . N 5 HOH 19 78 78 HOH HOH M . N 5 HOH 20 87 79 HOH HOH M . N 5 HOH 21 88 83 HOH HOH M . N 5 HOH 22 97 97 HOH HOH M . N 5 HOH 23 103 103 HOH HOH M . N 5 HOH 24 106 106 HOH HOH M . N 5 HOH 25 107 107 HOH HOH M . N 5 HOH 26 110 110 HOH HOH M . N 5 HOH 27 114 114 HOH HOH M . N 5 HOH 28 115 115 HOH HOH M . N 5 HOH 29 120 120 HOH HOH M . N 5 HOH 30 121 121 HOH HOH M . N 5 HOH 31 122 122 HOH HOH M . N 5 HOH 32 126 126 HOH HOH M . N 5 HOH 33 129 129 HOH HOH M . N 5 HOH 34 133 133 HOH HOH M . N 5 HOH 35 135 135 HOH HOH M . N 5 HOH 36 136 136 HOH HOH M . N 5 HOH 37 138 138 HOH HOH M . N 5 HOH 38 139 139 HOH HOH M . N 5 HOH 39 140 140 HOH HOH M . N 5 HOH 40 148 148 HOH HOH M . N 5 HOH 41 149 149 HOH HOH M . N 5 HOH 42 180 180 HOH HOH M . N 5 HOH 43 181 181 HOH HOH M . N 5 HOH 44 182 182 HOH HOH M . N 5 HOH 45 191 191 HOH HOH M . N 5 HOH 46 198 198 HOH HOH M . N 5 HOH 47 199 199 HOH HOH M . N 5 HOH 48 201 201 HOH HOH M . N 5 HOH 49 210 210 HOH HOH M . N 5 HOH 50 212 212 HOH HOH M . O 5 HOH 1 1 1 HOH HOH N . O 5 HOH 2 2 2 HOH HOH N . O 5 HOH 3 4 4 HOH HOH N . O 5 HOH 4 5 5 HOH HOH N . O 5 HOH 5 17 17 HOH HOH N . O 5 HOH 6 19 19 HOH HOH N . O 5 HOH 7 20 20 HOH HOH N . O 5 HOH 8 21 21 HOH HOH N . O 5 HOH 9 22 22 HOH HOH N . O 5 HOH 10 23 23 HOH HOH N . O 5 HOH 11 32 32 HOH HOH N . O 5 HOH 12 33 33 HOH HOH N . O 5 HOH 13 37 37 HOH HOH N . O 5 HOH 14 41 41 HOH HOH N . O 5 HOH 15 47 47 HOH HOH N . O 5 HOH 16 48 48 HOH HOH N . O 5 HOH 17 49 49 HOH HOH N . O 5 HOH 18 54 54 HOH HOH N . O 5 HOH 19 55 55 HOH HOH N . O 5 HOH 20 57 57 HOH HOH N . O 5 HOH 21 59 59 HOH HOH N . O 5 HOH 22 63 63 HOH HOH N . O 5 HOH 23 64 64 HOH HOH N . O 5 HOH 24 71 71 HOH HOH N . O 5 HOH 25 76 76 HOH HOH N . O 5 HOH 26 81 81 HOH HOH N . O 5 HOH 27 86 86 HOH HOH N . O 5 HOH 28 87 87 HOH HOH N . O 5 HOH 29 98 98 HOH HOH N . O 5 HOH 30 99 90 HOH HOH N . O 5 HOH 31 100 100 HOH HOH N . O 5 HOH 32 101 95 HOH HOH N . O 5 HOH 33 102 102 HOH HOH N . O 5 HOH 34 111 111 HOH HOH N . O 5 HOH 35 113 113 HOH HOH N . O 5 HOH 36 117 117 HOH HOH N . O 5 HOH 37 118 118 HOH HOH N . O 5 HOH 38 123 123 HOH HOH N . O 5 HOH 39 127 127 HOH HOH N . O 5 HOH 40 132 132 HOH HOH N . O 5 HOH 41 146 146 HOH HOH N . O 5 HOH 42 161 161 HOH HOH N . O 5 HOH 43 163 163 HOH HOH N . O 5 HOH 44 164 164 HOH HOH N . O 5 HOH 45 170 170 HOH HOH N . O 5 HOH 46 178 178 HOH HOH N . O 5 HOH 47 186 186 HOH HOH N . O 5 HOH 48 188 188 HOH HOH N . O 5 HOH 49 190 190 HOH HOH N . O 5 HOH 50 196 196 HOH HOH N . O 5 HOH 51 200 200 HOH HOH N . O 5 HOH 52 202 202 HOH HOH N . O 5 HOH 53 203 203 HOH HOH N . O 5 HOH 54 216 216 HOH HOH N . O 5 HOH 55 225 225 HOH HOH N . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id K _pdbx_unobs_or_zero_occ_atoms.auth_comp_id 0C _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 79 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id "O5'" _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id 0C _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id "O5'" # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 REFMAC refinement 5.1 ? 4 # _cell.entry_id 2GQ5 _cell.length_a 26.426 _cell.length_b 37.952 _cell.length_c 45.198 _cell.angle_alpha 113.16 _cell.angle_beta 100.27 _cell.angle_gamma 93.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GQ5 _symmetry.space_group_name_H-M 'P -1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 2 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2GQ5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.98 _exptl_crystal.density_percent_sol 37.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 287 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '7% PEG 400, 0.1 M CaCl2, 50 mM HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 287K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 CaCl2 ? ? ? 1 3 1 HEPES ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'PEG 400' ? ? ? 1 6 2 CaCl2 ? ? ? 1 7 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2003-12-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Si _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.803 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.803 # _reflns.entry_id 2GQ5 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 1.4 _reflns.number_obs 28908 _reflns.number_all 28908 _reflns.percent_possible_obs 97 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.065 _reflns.pdbx_netI_over_sigmaI 14 _reflns.B_iso_Wilson_estimate 18 _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.42 _reflns_shell.percent_possible_all 95 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.427 _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1429 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2GQ5 _refine.ls_number_reflns_obs 28908 _refine.ls_number_reflns_all 28908 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.4 _refine.ls_percent_reflns_obs 97 _refine.ls_R_factor_obs 0.252 _refine.ls_R_factor_all 0.252 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.318 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 578 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'NDB entry AR0012' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 675 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 225 _refine_hist.number_atoms_total 912 _refine_hist.d_res_high 1.4 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.472 ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 4.672 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 2GQ5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2GQ5 _struct.title 'Crystal structure of an RNA racemate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GQ5 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'double helix, racemate, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 1 PDB 2GQ5 2GQ5 ? ? ? 2 2 PDB 2GQ5 2GQ5 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2GQ5 K 1 ? 8 ? 2GQ5 79 ? 86 ? 79 86 2 2 2GQ5 L 1 ? 8 ? 2GQ5 90 ? 97 ? 90 97 3 1 2GQ5 M 1 ? 8 ? 2GQ5 79 ? 86 ? 79 86 4 2 2GQ5 N 1 ? 8 ? 2GQ5 90 ? 97 ? 90 97 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,L,M 2 1 C,D,F,G,H,I,J,K,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 'The biologically relevant (although not biological) RNA fragment is the duplex formed by chains M+N, K+L and X+Y' ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A 0C 1 "O3'" A ? ? 1_555 A 0U 2 P A ? K 0C 79 K 0U 80 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? A 0U 2 "O3'" A ? ? 1_555 A 0G 3 P A ? K 0U 80 K 0G 81 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale3 covale both ? A 0G 3 "O3'" A ? ? 1_555 A 0G 4 P A ? K 0G 81 K 0G 82 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale4 covale both ? A 0G 4 "O3'" A ? ? 1_555 A 0G 5 P A ? K 0G 82 K 0G 83 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale5 covale both ? A 0G 5 "O3'" A ? ? 1_555 A 0C 6 P A ? K 0G 83 K 0C 84 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale6 covale both ? A 0C 6 "O3'" A ? ? 1_555 A 0G 7 P A ? K 0C 84 K 0G 85 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale7 covale both ? A 0G 7 "O3'" A ? ? 1_555 A 0G 8 P A ? K 0G 85 K 0G 86 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale8 covale both ? B 0C 1 "O3'" A ? ? 1_555 B 0C 2 P A ? L 0C 90 L 0C 91 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale9 covale both ? B 0C 2 "O3'" A ? ? 1_555 B 0G 3 P A ? L 0C 91 L 0G 92 1_555 ? ? ? ? ? ? ? 1.583 ? ? covale10 covale both ? B 0G 3 "O3'" A ? ? 1_555 B 0C 4 P A ? L 0G 92 L 0C 93 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale11 covale both ? B 0C 4 "O3'" A ? ? 1_555 B 0C 5 P A ? L 0C 93 L 0C 94 1_555 ? ? ? ? ? ? ? 1.581 ? ? covale12 covale both ? B 0C 5 "O3'" A ? ? 1_555 B 0U 6 P A ? L 0C 94 L 0U 95 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale13 covale both ? B 0U 6 "O3'" A ? ? 1_555 B 0G 7 P A ? L 0U 95 L 0G 96 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale14 covale both ? B 0G 7 "O3'" A ? ? 1_555 B 0G 8 P A ? L 0G 96 L 0G 97 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale15 covale both ? C 0C 1 "O3'" A ? ? 1_555 C 0U 2 P A ? M 0C 79 M 0U 80 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale16 covale both ? C 0U 2 "O3'" A ? ? 1_555 C 0G 3 P A ? M 0U 80 M 0G 81 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale17 covale both ? C 0G 3 "O3'" A ? ? 1_555 C 0G 4 P A ? M 0G 81 M 0G 82 1_555 ? ? ? ? ? ? ? 1.557 ? ? covale18 covale both ? C 0G 4 "O3'" A ? ? 1_555 C 0G 5 P A ? M 0G 82 M 0G 83 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale19 covale both ? C 0G 5 "O3'" A ? ? 1_555 C 0C 6 P A ? M 0G 83 M 0C 84 1_555 ? ? ? ? ? ? ? 1.538 ? ? covale20 covale both ? C 0C 6 "O3'" A ? ? 1_555 C 0G 7 P A ? M 0C 84 M 0G 85 1_555 ? ? ? ? ? ? ? 1.582 ? ? covale21 covale both ? C 0G 7 "O3'" A ? ? 1_555 C 0G 8 P A ? M 0G 85 M 0G 86 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale22 covale both ? D 0C 1 "O3'" A ? ? 1_555 D 0C 2 P A ? N 0C 90 N 0C 91 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale23 covale both ? D 0C 2 "O3'" A ? ? 1_555 D 0G 3 P A ? N 0C 91 N 0G 92 1_555 ? ? ? ? ? ? ? 1.558 ? ? covale24 covale both ? D 0G 3 "O3'" A ? ? 1_555 D 0C 4 P A ? N 0G 92 N 0C 93 1_555 ? ? ? ? ? ? ? 1.581 ? ? covale25 covale both ? D 0C 4 "O3'" A ? ? 1_555 D 0C 5 P A ? N 0C 93 N 0C 94 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale26 covale both ? D 0C 5 "O3'" A ? ? 1_555 D 0U 6 P A ? N 0C 94 N 0U 95 1_555 ? ? ? ? ? ? ? 1.527 ? ? covale27 covale both ? D 0U 6 "O3'" A ? ? 1_555 D 0G 7 P A ? N 0U 95 N 0G 96 1_555 ? ? ? ? ? ? ? 1.535 ? ? covale28 covale both ? D 0G 7 "O3'" A ? ? 1_555 D 0G 8 P A ? N 0G 96 N 0G 97 1_555 ? ? ? ? ? ? ? 1.587 ? ? metalc1 metalc ? ? L HOH . O A ? ? 1_555 J CA . CA A ? K HOH 11 N CA 306 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc2 metalc ? ? L HOH . O A ? ? 1_555 J CA . CA A ? K HOH 15 N CA 306 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc3 metalc ? ? B 0G 8 "O3'" A ? ? 1_555 E CA . CA A ? L 0G 97 L CA 310 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc4 metalc ? ? B 0G 8 "O2'" A ? ? 1_555 E CA . CA A ? L 0G 97 L CA 310 1_555 ? ? ? ? ? ? ? 2.643 ? ? metalc5 metalc ? ? M HOH . O A ? ? 1_555 E CA . CA A ? L HOH 112 L CA 310 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc6 metalc ? ? M HOH . O A ? ? 1_555 E CA . CA A ? L HOH 130 L CA 310 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc7 metalc ? ? E CA . CA A ? ? 1_555 N HOH . O A ? L CA 310 M HOH 88 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc8 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 18 M CA 308 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc9 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 65 M CA 308 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc10 metalc ? ? N HOH . O A ? ? 1_555 G CA . CA A ? M HOH 66 M CA 311 1_555 ? ? ? ? ? ? ? 2.723 ? ? metalc11 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 70 M CA 308 1_555 ? ? ? ? ? ? ? 2.253 ? ? metalc12 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 77 M CA 308 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc13 metalc ? ? N HOH . O A ? ? 1_555 G CA . CA A ? M HOH 78 M CA 311 1_555 ? ? ? ? ? ? ? 2.423 ? ? metalc14 metalc ? ? C 0G 4 N7 A ? ? 1_555 G CA . CA A ? M 0G 82 M CA 311 1_555 ? ? ? ? ? ? ? 2.672 ? ? metalc15 metalc ? ? C 0G 8 "O3'" A ? ? 1_555 F CA . CA A ? M 0G 86 M CA 308 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc16 metalc ? ? C 0G 8 "O2'" A ? ? 1_555 F CA . CA A ? M 0G 86 M CA 308 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc17 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 87 M CA 308 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc18 metalc ? ? N HOH . O A ? ? 1_555 F CA . CA A ? M HOH 97 M CA 308 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc19 metalc ? ? N HOH . O A ? ? 1_555 G CA . CA A ? M HOH 106 M CA 311 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc20 metalc ? ? N HOH . O A ? ? 1_555 G CA . CA A ? M HOH 212 M CA 311 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc21 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 1 N CA 302 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc22 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 5 N CA 302 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc23 metalc ? ? O HOH . O A ? ? 1_555 I CA . CA A ? N HOH 5 N CA 304 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc24 metalc ? ? O HOH . O A ? ? 1_555 J CA . CA A ? N HOH 20 N CA 306 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc25 metalc ? ? O HOH . O A ? ? 1_555 I CA . CA A ? N HOH 21 N CA 304 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc26 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 22 N CA 302 1_555 ? ? ? ? ? ? ? 2.134 ? ? metalc27 metalc ? ? O HOH . O A ? ? 1_555 I CA . CA A ? N HOH 22 N CA 304 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc28 metalc ? ? O HOH . O A ? ? 1_555 J CA . CA A ? N HOH 33 N CA 306 1_555 ? ? ? ? ? ? ? 2.469 ? ? metalc29 metalc ? ? O HOH . O A ? ? 1_555 J CA . CA A ? N HOH 47 N CA 306 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc30 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 48 N CA 302 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc31 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 55 N CA 302 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc32 metalc ? ? O HOH . O A ? ? 1_555 I CA . CA A ? N HOH 55 N CA 304 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc33 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 59 N CA 302 1_555 ? ? ? ? ? ? ? 2.412 ? ? metalc34 metalc ? ? O HOH . O A ? ? 1_555 J CA . CA A ? N HOH 63 N CA 306 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc35 metalc ? ? D 0G 7 OP1 A ? ? 1_555 I CA . CA A ? N 0G 96 N CA 304 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc36 metalc ? ? D 0G 8 "O3'" A ? ? 1_555 J CA . CA A ? N 0G 97 N CA 306 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc37 metalc ? ? D 0G 8 "O2'" A ? ? 1_555 J CA . CA A ? N 0G 97 N CA 306 1_555 ? ? ? ? ? ? ? 2.511 ? ? metalc38 metalc ? ? O HOH . O A ? ? 1_555 I CA . CA A ? N HOH 98 N CA 304 1_555 ? ? ? ? ? ? ? 3.060 ? ? metalc39 metalc ? ? O HOH . O A ? ? 1_555 H CA . CA A ? N HOH 100 N CA 302 1_555 ? ? ? ? ? ? ? 2.363 ? ? hydrog1 hydrog ? ? A 0C 1 N3 A ? ? 1_555 B 0G 8 N1 A ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A 0C 1 N4 A ? ? 1_555 B 0G 8 O6 A ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A 0C 1 O2 A ? ? 1_555 B 0G 8 N2 A ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 0U 2 N3 A ? ? 1_555 B 0G 7 O6 A ? K 0U 80 L 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A 0U 2 O2 A ? ? 1_555 B 0G 7 N1 A ? K 0U 80 L 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A 0G 3 N1 A ? ? 1_555 B 0U 6 O2 A ? K 0G 81 L 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog7 hydrog ? ? A 0G 3 O6 A ? ? 1_555 B 0U 6 N3 A ? K 0G 81 L 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A 0G 4 N1 A ? ? 1_555 B 0C 5 N3 A ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 0G 4 N2 A ? ? 1_555 B 0C 5 O2 A ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 0G 4 O6 A ? ? 1_555 B 0C 5 N4 A ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 0G 5 N1 A ? ? 1_555 B 0C 4 N3 A ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 0G 5 N2 A ? ? 1_555 B 0C 4 O2 A ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A 0G 5 O6 A ? ? 1_555 B 0C 4 N4 A ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A 0C 6 O2 A ? ? 1_555 B 0G 3 N2 A ? K 0C 84 L 0G 92 1_555 ? ? ? ? ? ? '0C-0G PAIR' ? ? ? hydrog15 hydrog ? ? A 0G 7 N1 A ? ? 1_555 B 0C 2 N3 A ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A 0G 7 N2 A ? ? 1_555 B 0C 2 O2 A ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A 0G 7 O6 A ? ? 1_555 B 0C 2 N4 A ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A 0G 8 N1 A ? ? 1_555 B 0C 1 N3 A ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A 0G 8 N2 A ? ? 1_555 B 0C 1 O2 A ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A 0G 8 O6 A ? ? 1_555 B 0C 1 N4 A ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C 0C 1 N3 A ? ? 1_555 D 0G 8 N1 A ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C 0C 1 N4 A ? ? 1_555 D 0G 8 O6 A ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C 0C 1 O2 A ? ? 1_555 D 0G 8 N2 A ? M 0C 79 N 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C 0U 2 N3 A ? ? 1_555 D 0G 7 O6 A ? M 0U 80 N 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? C 0U 2 O2 A ? ? 1_555 D 0G 7 N1 A ? M 0U 80 N 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? C 0G 3 N1 A ? ? 1_555 D 0U 6 O2 A ? M 0G 81 N 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? C 0G 3 O6 A ? ? 1_555 D 0U 6 N3 A ? M 0G 81 N 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? C 0G 4 N1 A ? ? 1_555 D 0C 5 N3 A ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C 0G 4 N2 A ? ? 1_555 D 0C 5 O2 A ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C 0G 4 O6 A ? ? 1_555 D 0C 5 N4 A ? M 0G 82 N 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C 0G 5 N1 A ? ? 1_555 D 0C 4 N3 A ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C 0G 5 N2 A ? ? 1_555 D 0C 4 O2 A ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C 0G 5 O6 A ? ? 1_555 D 0C 4 N4 A ? M 0G 83 N 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C 0C 6 N3 A ? ? 1_555 D 0G 3 N1 A ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C 0C 6 N4 A ? ? 1_555 D 0G 3 O6 A ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C 0C 6 O2 A ? ? 1_555 D 0G 3 N2 A ? M 0C 84 N 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C 0G 7 N1 A ? ? 1_555 D 0C 2 N3 A ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C 0G 7 N2 A ? ? 1_555 D 0C 2 O2 A ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C 0G 7 O6 A ? ? 1_555 D 0C 2 N4 A ? M 0G 85 N 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C 0G 8 N1 A ? ? 1_555 D 0C 1 N3 A ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C 0G 8 N2 A ? ? 1_555 D 0C 1 O2 A ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C 0G 8 O6 A ? ? 1_555 D 0C 1 N4 A ? M 0G 86 N 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A L HOH . ? K HOH 15 ? 1_555 71.1 ? 2 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 20 ? 1_555 135.4 ? 3 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 20 ? 1_555 71.1 ? 4 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 33 ? 1_555 146.1 ? 5 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 33 ? 1_555 141.3 ? 6 O A O HOH . ? N HOH 20 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 33 ? 1_555 77.2 ? 7 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 47 ? 1_555 75.3 ? 8 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 47 ? 1_555 143.4 ? 9 O A O HOH . ? N HOH 20 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 47 ? 1_555 129.4 ? 10 O A O HOH . ? N HOH 33 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 47 ? 1_555 74.9 ? 11 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 63 ? 1_555 82.1 ? 12 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 63 ? 1_555 84.7 ? 13 O A O HOH . ? N HOH 20 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 63 ? 1_555 71.8 ? 14 O A O HOH . ? N HOH 33 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 63 ? 1_555 106.1 ? 15 O A O HOH . ? N HOH 47 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 O A O HOH . ? N HOH 63 ? 1_555 76.6 ? 16 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 111.0 ? 17 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 71.2 ? 18 O A O HOH . ? N HOH 20 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 77.5 ? 19 O A O HOH . ? N HOH 33 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 80.8 ? 20 O A O HOH . ? N HOH 47 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 136.4 ? 21 O A O HOH . ? N HOH 63 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 145.8 ? 22 O A L HOH . ? K HOH 11 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 79.8 ? 23 O A L HOH . ? K HOH 15 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 111.9 ? 24 O A O HOH . ? N HOH 20 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 136.8 ? 25 O A O HOH . ? N HOH 33 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 77.3 ? 26 O A O HOH . ? N HOH 47 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 75.2 ? 27 O A O HOH . ? N HOH 63 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 149.6 ? 28 "O3'" A D 0G 8 ? N 0G 97 ? 1_555 CA A J CA . ? N CA 306 ? 1_555 "O2'" A D 0G 8 ? N 0G 97 ? 1_555 64.4 ? 29 "O3'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 "O2'" A B 0G 8 ? L 0G 97 ? 1_555 61.2 ? 30 "O3'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A M HOH . ? L HOH 112 ? 1_555 75.4 ? 31 "O2'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A M HOH . ? L HOH 112 ? 1_555 77.4 ? 32 "O3'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A M HOH . ? L HOH 130 ? 1_555 79.5 ? 33 "O2'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A M HOH . ? L HOH 130 ? 1_555 119.4 ? 34 O A M HOH . ? L HOH 112 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A M HOH . ? L HOH 130 ? 1_555 136.7 ? 35 "O3'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A N HOH . ? M HOH 88 ? 1_555 107.6 ? 36 "O2'" A B 0G 8 ? L 0G 97 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A N HOH . ? M HOH 88 ? 1_555 80.8 ? 37 O A M HOH . ? L HOH 112 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A N HOH . ? M HOH 88 ? 1_555 153.0 ? 38 O A M HOH . ? L HOH 130 ? 1_555 CA A E CA . ? L CA 310 ? 1_555 O A N HOH . ? M HOH 88 ? 1_555 68.7 ? 39 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 65 ? 1_555 77.9 ? 40 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 70 ? 1_555 148.2 ? 41 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 70 ? 1_555 74.0 ? 42 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 77 ? 1_555 71.9 ? 43 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 77 ? 1_555 134.7 ? 44 O A N HOH . ? M HOH 70 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 77 ? 1_555 139.6 ? 45 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 84.4 ? 46 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 137.5 ? 47 O A N HOH . ? M HOH 70 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 106.6 ? 48 O A N HOH . ? M HOH 77 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 72.2 ? 49 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 78.1 ? 50 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 74.7 ? 51 O A N HOH . ? M HOH 70 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 80.3 ? 52 O A N HOH . ? M HOH 77 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 128.6 ? 53 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 63.9 ? 54 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 143.8 ? 55 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 136.5 ? 56 O A N HOH . ? M HOH 70 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 67.5 ? 57 O A N HOH . ? M HOH 77 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 73.7 ? 58 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 74.7 ? 59 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 87 ? 1_555 116.4 ? 60 O A N HOH . ? M HOH 18 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 102.5 ? 61 O A N HOH . ? M HOH 65 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 75.9 ? 62 O A N HOH . ? M HOH 70 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 85.0 ? 63 O A N HOH . ? M HOH 77 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 78.5 ? 64 "O3'" A C 0G 8 ? M 0G 86 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 146.2 ? 65 "O2'" A C 0G 8 ? M 0G 86 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 149.7 ? 66 O A N HOH . ? M HOH 87 ? 1_555 CA A F CA . ? M CA 308 ? 1_555 O A N HOH . ? M HOH 97 ? 1_555 81.2 ? 67 O A N HOH . ? M HOH 66 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 78 ? 1_555 55.9 ? 68 O A N HOH . ? M HOH 66 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 N7 A C 0G 4 ? M 0G 82 ? 1_555 80.1 ? 69 O A N HOH . ? M HOH 78 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 N7 A C 0G 4 ? M 0G 82 ? 1_555 99.1 ? 70 O A N HOH . ? M HOH 66 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 106 ? 1_555 115.6 ? 71 O A N HOH . ? M HOH 78 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 106 ? 1_555 153.2 ? 72 N7 A C 0G 4 ? M 0G 82 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 106 ? 1_555 104.4 ? 73 O A N HOH . ? M HOH 66 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 212 ? 1_555 57.3 ? 74 O A N HOH . ? M HOH 78 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 212 ? 1_555 64.9 ? 75 N7 A C 0G 4 ? M 0G 82 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 212 ? 1_555 136.7 ? 76 O A N HOH . ? M HOH 106 ? 1_555 CA A G CA . ? M CA 311 ? 1_555 O A N HOH . ? M HOH 212 ? 1_555 88.9 ? 77 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 5 ? 1_555 84.6 ? 78 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 22 ? 1_555 87.7 ? 79 O A O HOH . ? N HOH 5 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 22 ? 1_555 83.7 ? 80 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 48 ? 1_555 79.8 ? 81 O A O HOH . ? N HOH 5 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 48 ? 1_555 74.9 ? 82 O A O HOH . ? N HOH 22 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 48 ? 1_555 156.1 ? 83 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 160.4 ? 84 O A O HOH . ? N HOH 5 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 80.2 ? 85 O A O HOH . ? N HOH 22 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 102.8 ? 86 O A O HOH . ? N HOH 48 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 84.3 ? 87 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 59 ? 1_555 110.9 ? 88 O A O HOH . ? N HOH 5 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 59 ? 1_555 139.0 ? 89 O A O HOH . ? N HOH 22 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 59 ? 1_555 132.6 ? 90 O A O HOH . ? N HOH 48 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 59 ? 1_555 71.2 ? 91 O A O HOH . ? N HOH 55 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 59 ? 1_555 74.1 ? 92 O A O HOH . ? N HOH 1 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 75.6 ? 93 O A O HOH . ? N HOH 5 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 153.8 ? 94 O A O HOH . ? N HOH 22 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 78.6 ? 95 O A O HOH . ? N HOH 48 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 117.1 ? 96 O A O HOH . ? N HOH 55 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 122.4 ? 97 O A O HOH . ? N HOH 59 ? 1_555 CA A H CA . ? N CA 302 ? 1_555 O A O HOH . ? N HOH 100 ? 1_555 65.7 ? 98 O A O HOH . ? N HOH 5 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 21 ? 1_555 77.9 ? 99 O A O HOH . ? N HOH 5 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 22 ? 1_555 75.6 ? 100 O A O HOH . ? N HOH 21 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 22 ? 1_555 112.7 ? 101 O A O HOH . ? N HOH 5 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 83.4 ? 102 O A O HOH . ? N HOH 21 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 132.1 ? 103 O A O HOH . ? N HOH 22 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 55 ? 1_555 104.5 ? 104 O A O HOH . ? N HOH 5 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 OP1 A D 0G 7 ? N 0G 96 ? 1_555 135.7 ? 105 O A O HOH . ? N HOH 21 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 OP1 A D 0G 7 ? N 0G 96 ? 1_555 79.8 ? 106 O A O HOH . ? N HOH 22 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 OP1 A D 0G 7 ? N 0G 96 ? 1_555 148.7 ? 107 O A O HOH . ? N HOH 55 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 OP1 A D 0G 7 ? N 0G 96 ? 1_555 83.9 ? 108 O A O HOH . ? N HOH 5 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 98 ? 1_555 164.3 ? 109 O A O HOH . ? N HOH 21 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 98 ? 1_555 114.9 ? 110 O A O HOH . ? N HOH 22 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 98 ? 1_555 90.5 ? 111 O A O HOH . ? N HOH 55 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 98 ? 1_555 93.2 ? 112 OP1 A D 0G 7 ? N 0G 96 ? 1_555 CA A I CA . ? N CA 304 ? 1_555 O A O HOH . ? N HOH 98 ? 1_555 58.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software N CA 302 ? 8 'BINDING SITE FOR RESIDUE CA N 302' AC2 Software N CA 304 ? 7 'BINDING SITE FOR RESIDUE CA N 304' AC3 Software N CA 306 ? 7 'BINDING SITE FOR RESIDUE CA N 306' AC4 Software M CA 308 ? 7 'BINDING SITE FOR RESIDUE CA M 308' AC5 Software L CA 310 ? 4 'BINDING SITE FOR RESIDUE CA L 310' AC6 Software M CA 311 ? 5 'BINDING SITE FOR RESIDUE CA M 311' AC7 Software N GOL 301 ? 6 'BINDING SITE FOR RESIDUE GOL N 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 HOH O . ? HOH N 1 . ? 1_555 ? 2 AC1 8 HOH O . ? HOH N 5 . ? 1_555 ? 3 AC1 8 HOH O . ? HOH N 22 . ? 1_555 ? 4 AC1 8 HOH O . ? HOH N 48 . ? 1_555 ? 5 AC1 8 HOH O . ? HOH N 55 . ? 1_555 ? 6 AC1 8 HOH O . ? HOH N 59 . ? 1_555 ? 7 AC1 8 HOH O . ? HOH N 100 . ? 1_555 ? 8 AC1 8 CA I . ? CA N 304 . ? 1_555 ? 9 AC2 7 HOH O . ? HOH N 5 . ? 1_555 ? 10 AC2 7 HOH O . ? HOH N 21 . ? 1_555 ? 11 AC2 7 HOH O . ? HOH N 22 . ? 1_555 ? 12 AC2 7 HOH O . ? HOH N 55 . ? 1_555 ? 13 AC2 7 0G D 7 ? 0G N 96 . ? 1_555 ? 14 AC2 7 HOH O . ? HOH N 98 . ? 1_555 ? 15 AC2 7 CA H . ? CA N 302 . ? 1_555 ? 16 AC3 7 HOH L . ? HOH K 11 . ? 1_555 ? 17 AC3 7 HOH L . ? HOH K 15 . ? 1_555 ? 18 AC3 7 HOH O . ? HOH N 20 . ? 1_555 ? 19 AC3 7 HOH O . ? HOH N 33 . ? 1_555 ? 20 AC3 7 HOH O . ? HOH N 47 . ? 1_555 ? 21 AC3 7 HOH O . ? HOH N 63 . ? 1_555 ? 22 AC3 7 0G D 8 ? 0G N 97 . ? 1_555 ? 23 AC4 7 HOH N . ? HOH M 18 . ? 1_555 ? 24 AC4 7 HOH N . ? HOH M 65 . ? 1_555 ? 25 AC4 7 HOH N . ? HOH M 70 . ? 1_555 ? 26 AC4 7 HOH N . ? HOH M 77 . ? 1_555 ? 27 AC4 7 0G C 8 ? 0G M 86 . ? 1_555 ? 28 AC4 7 HOH N . ? HOH M 87 . ? 1_555 ? 29 AC4 7 HOH N . ? HOH M 97 . ? 1_555 ? 30 AC5 4 0G B 8 ? 0G L 97 . ? 1_555 ? 31 AC5 4 HOH M . ? HOH L 112 . ? 1_555 ? 32 AC5 4 HOH M . ? HOH L 130 . ? 1_555 ? 33 AC5 4 HOH N . ? HOH M 88 . ? 1_555 ? 34 AC6 5 HOH N . ? HOH M 66 . ? 1_555 ? 35 AC6 5 HOH N . ? HOH M 78 . ? 1_555 ? 36 AC6 5 0G C 4 ? 0G M 82 . ? 1_555 ? 37 AC6 5 HOH N . ? HOH M 106 . ? 1_555 ? 38 AC6 5 HOH N . ? HOH M 212 . ? 1_555 ? 39 AC7 6 0G A 7 ? 0G K 85 . ? 1_554 ? 40 AC7 6 HOH L . ? HOH K 89 . ? 1_554 ? 41 AC7 6 0C B 2 ? 0C L 91 . ? 1_554 ? 42 AC7 6 0G B 3 ? 0G L 92 . ? 1_554 ? 43 AC7 6 0G D 3 ? 0G N 92 . ? 1_555 ? 44 AC7 6 0C D 4 ? 0C N 93 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O5'" L 0G 92 ? A "C5'" L 0G 92 ? A 1.355 1.420 -0.065 0.009 N 2 1 N1 M 0G 81 ? A C2 M 0G 81 ? A 1.324 1.373 -0.049 0.008 N 3 1 N7 M 0G 81 ? A C8 M 0G 81 ? A 1.347 1.305 0.042 0.006 N 4 1 C2 M 0G 82 ? A N3 M 0G 82 ? A 1.387 1.323 0.064 0.008 N 5 1 C5 M 0G 82 ? A N7 M 0G 82 ? A 1.432 1.388 0.044 0.006 N 6 1 N7 M 0G 82 ? A C8 M 0G 82 ? A 1.353 1.305 0.048 0.006 N 7 1 "O3'" N 0C 94 ? A P N 0U 95 ? A 1.527 1.607 -0.080 0.012 Y 8 1 C2 N 0U 95 ? A O2 N 0U 95 ? A 1.164 1.219 -0.055 0.009 N 9 1 N7 N 0G 96 ? A C8 N 0G 96 ? A 1.345 1.305 0.040 0.006 N 10 2 "O3'" L 0C 93 ? B "C3'" L 0C 93 ? B 1.328 1.417 -0.089 0.014 N 11 2 "O3'" L 0U 95 ? B "C3'" L 0U 95 ? B 1.510 1.427 0.083 0.012 N 12 2 N1 M 0G 81 ? B C2 M 0G 81 ? B 1.324 1.373 -0.049 0.008 N 13 2 N7 M 0G 81 ? B C8 M 0G 81 ? B 1.347 1.305 0.042 0.006 N 14 2 C2 M 0G 82 ? B N3 M 0G 82 ? B 1.387 1.323 0.064 0.008 N 15 2 C5 M 0G 82 ? B N7 M 0G 82 ? B 1.432 1.388 0.044 0.006 N 16 2 N7 M 0G 82 ? B C8 M 0G 82 ? B 1.353 1.305 0.048 0.006 N 17 2 "O3'" N 0C 94 ? B P N 0U 95 ? B 1.527 1.607 -0.080 0.012 Y 18 2 C2 N 0U 95 ? B O2 N 0U 95 ? B 1.164 1.219 -0.055 0.009 N 19 2 N7 N 0G 96 ? B C8 N 0G 96 ? B 1.345 1.305 0.040 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C4'" K 0U 80 ? A "C3'" K 0U 80 ? A "C2'" K 0U 80 ? A 94.73 102.60 -7.87 1.00 N 2 1 "C4'" K 0G 82 ? A "C3'" K 0G 82 ? A "C2'" K 0G 82 ? A 96.35 102.60 -6.25 1.00 N 3 1 "C3'" K 0G 82 ? A "O3'" K 0G 82 ? A P K 0G 83 ? A 127.08 119.70 7.38 1.20 Y 4 1 N9 K 0G 83 ? A "C1'" K 0G 83 ? A "C2'" K 0G 83 ? A 104.88 112.00 -7.12 1.10 N 5 1 "O5'" K 0C 84 ? A P K 0C 84 ? A OP1 K 0C 84 ? A 97.49 105.70 -8.21 0.90 N 6 1 "O4'" K 0C 84 ? A "C4'" K 0C 84 ? A "C3'" K 0C 84 ? A 97.36 104.00 -6.64 1.00 N 7 1 N1 K 0C 84 ? A C2 K 0C 84 ? A O2 K 0C 84 ? A 114.70 118.90 -4.20 0.60 N 8 1 N3 K 0C 84 ? A C2 K 0C 84 ? A O2 K 0C 84 ? A 127.76 121.90 5.86 0.70 N 9 1 "C3'" K 0C 84 ? A "O3'" K 0C 84 ? A P K 0G 85 ? A 112.37 119.70 -7.33 1.20 Y 10 1 "O3'" L 0C 91 ? A P L 0G 92 ? A "O5'" L 0G 92 ? A 90.71 104.00 -13.29 1.90 Y 11 1 "O5'" L 0G 96 ? A P L 0G 96 ? A OP1 L 0G 96 ? A 99.60 105.70 -6.10 0.90 N 12 1 "C4'" L 0G 97 ? A "C3'" L 0G 97 ? A "C2'" L 0G 97 ? A 95.30 102.60 -7.30 1.00 N 13 1 N1 M 0U 80 ? A C2 M 0U 80 ? A O2 M 0U 80 ? A 116.34 122.80 -6.46 0.70 N 14 1 N3 M 0U 80 ? A C2 M 0U 80 ? A O2 M 0U 80 ? A 127.85 122.20 5.65 0.70 N 15 1 C5 M 0G 81 ? A C6 M 0G 81 ? A O6 M 0G 81 ? A 124.94 128.60 -3.66 0.60 N 16 1 C6 M 0G 83 ? A N1 M 0G 83 ? A C2 M 0G 83 ? A 121.40 125.10 -3.70 0.60 N 17 1 C5 M 0G 83 ? A C6 M 0G 83 ? A O6 M 0G 83 ? A 124.46 128.60 -4.14 0.60 N 18 1 C4 M 0C 84 ? A C5 M 0C 84 ? A C6 M 0C 84 ? A 113.76 117.40 -3.64 0.50 N 19 1 C5 M 0C 84 ? A C4 M 0C 84 ? A N4 M 0C 84 ? A 115.16 120.20 -5.04 0.70 N 20 1 C6 M 0G 85 ? A N1 M 0G 85 ? A C2 M 0G 85 ? A 120.64 125.10 -4.46 0.60 N 21 1 N1 M 0G 85 ? A C2 M 0G 85 ? A N3 M 0G 85 ? A 129.07 123.90 5.17 0.60 N 22 1 C8 N 0G 92 ? A N9 N 0G 92 ? A C4 N 0G 92 ? A 103.28 106.40 -3.12 0.40 N 23 1 N9 N 0G 92 ? A C4 N 0G 92 ? A C5 N 0G 92 ? A 108.51 105.40 3.11 0.40 N 24 1 C2 N 0C 94 ? A N3 N 0C 94 ? A C4 N 0C 94 ? A 124.84 119.90 4.94 0.50 N 25 1 N3 N 0C 94 ? A C4 N 0C 94 ? A C5 N 0C 94 ? A 118.52 121.90 -3.38 0.40 N 26 1 "C4'" N 0U 95 ? A "C3'" N 0U 95 ? A "C2'" N 0U 95 ? A 95.70 102.60 -6.90 1.00 N 27 1 N7 N 0G 96 ? A C8 N 0G 96 ? A N9 N 0G 96 ? A 109.90 113.10 -3.20 0.50 N 28 1 C8 N 0G 96 ? A N9 N 0G 96 ? A C4 N 0G 96 ? A 109.97 106.40 3.57 0.40 N 29 1 N9 N 0G 96 ? A C4 N 0G 96 ? A C5 N 0G 96 ? A 102.99 105.40 -2.41 0.40 N 30 1 N1 N 0G 96 ? A C2 N 0G 96 ? A N2 N 0G 96 ? A 123.22 116.20 7.02 0.90 N 31 1 C5 N 0G 96 ? A C6 N 0G 96 ? A O6 N 0G 96 ? A 123.87 128.60 -4.73 0.60 N 32 2 "O5'" K 0G 82 ? B "C5'" K 0G 82 ? B "C4'" K 0G 82 ? B 102.16 109.40 -7.24 0.80 N 33 2 "C1'" K 0G 82 ? B "O4'" K 0G 82 ? B "C4'" K 0G 82 ? B 104.39 109.70 -5.31 0.70 N 34 2 "C4'" K 0G 82 ? B "C3'" K 0G 82 ? B "C2'" K 0G 82 ? B 95.37 102.60 -7.23 1.00 N 35 2 N3 K 0G 82 ? B C2 K 0G 82 ? B N2 K 0G 82 ? B 126.89 119.90 6.99 0.70 N 36 2 N1 K 0G 82 ? B C6 K 0G 82 ? B O6 K 0G 82 ? B 124.05 119.90 4.15 0.60 N 37 2 C5 K 0G 82 ? B C6 K 0G 82 ? B O6 K 0G 82 ? B 124.70 128.60 -3.90 0.60 N 38 2 "O5'" L 0G 92 ? B "C5'" L 0G 92 ? B "C4'" L 0G 92 ? B 104.20 109.40 -5.20 0.80 N 39 2 "C3'" L 0C 93 ? B "C2'" L 0C 93 ? B "C1'" L 0C 93 ? B 96.36 101.30 -4.94 0.70 N 40 2 "C3'" L 0C 93 ? B "O3'" L 0C 93 ? B P L 0C 94 ? B 112.04 119.70 -7.66 1.20 Y 41 2 "O3'" L 0C 93 ? B P L 0C 94 ? B OP1 L 0C 94 ? B 117.13 110.50 6.63 1.10 Y 42 2 N1 M 0U 80 ? B C2 M 0U 80 ? B O2 M 0U 80 ? B 116.34 122.80 -6.46 0.70 N 43 2 N3 M 0U 80 ? B C2 M 0U 80 ? B O2 M 0U 80 ? B 127.85 122.20 5.65 0.70 N 44 2 C5 M 0G 81 ? B C6 M 0G 81 ? B O6 M 0G 81 ? B 124.94 128.60 -3.66 0.60 N 45 2 C6 M 0G 83 ? B N1 M 0G 83 ? B C2 M 0G 83 ? B 121.40 125.10 -3.70 0.60 N 46 2 C5 M 0G 83 ? B C6 M 0G 83 ? B O6 M 0G 83 ? B 124.46 128.60 -4.14 0.60 N 47 2 C4 M 0C 84 ? B C5 M 0C 84 ? B C6 M 0C 84 ? B 113.76 117.40 -3.64 0.50 N 48 2 C5 M 0C 84 ? B C4 M 0C 84 ? B N4 M 0C 84 ? B 115.16 120.20 -5.04 0.70 N 49 2 C6 M 0G 85 ? B N1 M 0G 85 ? B C2 M 0G 85 ? B 120.64 125.10 -4.46 0.60 N 50 2 N1 M 0G 85 ? B C2 M 0G 85 ? B N3 M 0G 85 ? B 129.07 123.90 5.17 0.60 N 51 2 C8 N 0G 92 ? B N9 N 0G 92 ? B C4 N 0G 92 ? B 103.28 106.40 -3.12 0.40 N 52 2 N9 N 0G 92 ? B C4 N 0G 92 ? B C5 N 0G 92 ? B 108.51 105.40 3.11 0.40 N 53 2 C2 N 0C 94 ? B N3 N 0C 94 ? B C4 N 0C 94 ? B 124.84 119.90 4.94 0.50 N 54 2 N3 N 0C 94 ? B C4 N 0C 94 ? B C5 N 0C 94 ? B 118.52 121.90 -3.38 0.40 N 55 2 "C4'" N 0U 95 ? B "C3'" N 0U 95 ? B "C2'" N 0U 95 ? B 95.70 102.60 -6.90 1.00 N 56 2 N7 N 0G 96 ? B C8 N 0G 96 ? B N9 N 0G 96 ? B 109.90 113.10 -3.20 0.50 N 57 2 C8 N 0G 96 ? B N9 N 0G 96 ? B C4 N 0G 96 ? B 109.97 106.40 3.57 0.40 N 58 2 N9 N 0G 96 ? B C4 N 0G 96 ? B C5 N 0G 96 ? B 102.99 105.40 -2.41 0.40 N 59 2 N1 N 0G 96 ? B C2 N 0G 96 ? B N2 N 0G 96 ? B 123.22 116.20 7.02 0.90 N 60 2 C5 N 0G 96 ? B C6 N 0G 96 ? B O6 N 0G 96 ? B 123.87 128.60 -4.73 0.60 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0C OP3 O N N 1 0C P P N N 2 0C OP1 O N N 3 0C OP2 O N N 4 0C "O5'" O N N 5 0C "C5'" C N N 6 0C "C4'" C N S 7 0C "O4'" O N N 8 0C "C3'" C N R 9 0C "O3'" O N N 10 0C "C2'" C N S 11 0C "O2'" O N N 12 0C "C1'" C N S 13 0C N1 N N N 14 0C C2 C N N 15 0C O2 O N N 16 0C N3 N N N 17 0C C4 C N N 18 0C N4 N N N 19 0C C5 C N N 20 0C C6 C N N 21 0C HOP3 H N N 22 0C HOP2 H N N 23 0C "H5'" H N N 24 0C "H5''" H N N 25 0C "H4'" H N N 26 0C "H3'" H N N 27 0C "HO3'" H N N 28 0C "H2'" H N N 29 0C "HO2'" H N N 30 0C "H1'" H N N 31 0C H41 H N N 32 0C H42 H N N 33 0C H5 H N N 34 0C H6 H N N 35 0G OP3 O N N 36 0G P P N N 37 0G OP1 O N N 38 0G OP2 O N N 39 0G "O5'" O N N 40 0G "C5'" C N N 41 0G "C4'" C N S 42 0G "O4'" O N N 43 0G "C3'" C N R 44 0G "O3'" O N N 45 0G "C2'" C N S 46 0G "O2'" O N N 47 0G "C1'" C N S 48 0G N9 N Y N 49 0G C8 C Y N 50 0G N7 N Y N 51 0G C6 C N N 52 0G O6 O N N 53 0G C5 C Y N 54 0G N1 N N N 55 0G C2 C N N 56 0G N2 N N N 57 0G N3 N N N 58 0G C4 C Y N 59 0G HOP3 H N N 60 0G HOP2 H N N 61 0G "H5'" H N N 62 0G "H5''" H N N 63 0G "H4'" H N N 64 0G "H3'" H N N 65 0G "HO3'" H N N 66 0G "H2'" H N N 67 0G "HO2'" H N N 68 0G "H1'" H N N 69 0G H8 H N N 70 0G H1 H N N 71 0G H21 H N N 72 0G H22 H N N 73 0U OP3 O N N 74 0U P P N N 75 0U OP1 O N N 76 0U OP2 O N N 77 0U "O5'" O N N 78 0U "C5'" C N N 79 0U "C4'" C N S 80 0U "O4'" O N N 81 0U "C3'" C N R 82 0U "O3'" O N N 83 0U "C2'" C N S 84 0U "O2'" O N N 85 0U "C1'" C N S 86 0U N1 N N N 87 0U C2 C N N 88 0U O2 O N N 89 0U N3 N N N 90 0U C4 C N N 91 0U O4 O N N 92 0U C5 C N N 93 0U C6 C N N 94 0U HOP3 H N N 95 0U HOP2 H N N 96 0U "H5'" H N N 97 0U "H5''" H N N 98 0U "H4'" H N N 99 0U "H3'" H N N 100 0U "HO3'" H N N 101 0U "H2'" H N N 102 0U "HO2'" H N N 103 0U "H1'" H N N 104 0U H3 H N N 105 0U H5 H N N 106 0U H6 H N N 107 CA CA CA N N 108 GOL C1 C N N 109 GOL O1 O N N 110 GOL C2 C N N 111 GOL O2 O N N 112 GOL C3 C N N 113 GOL O3 O N N 114 GOL H11 H N N 115 GOL H12 H N N 116 GOL HO1 H N N 117 GOL H2 H N N 118 GOL HO2 H N N 119 GOL H31 H N N 120 GOL H32 H N N 121 GOL HO3 H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0C OP3 P sing N N 1 0C OP3 HOP3 sing N N 2 0C P OP1 doub N N 3 0C P OP2 sing N N 4 0C P "O5'" sing N N 5 0C OP2 HOP2 sing N N 6 0C "O5'" "C5'" sing N N 7 0C "C5'" "C4'" sing N N 8 0C "C5'" "H5'" sing N N 9 0C "C5'" "H5''" sing N N 10 0C "C4'" "O4'" sing N N 11 0C "C4'" "C3'" sing N N 12 0C "C4'" "H4'" sing N N 13 0C "O4'" "C1'" sing N N 14 0C "C3'" "O3'" sing N N 15 0C "C3'" "C2'" sing N N 16 0C "C3'" "H3'" sing N N 17 0C "O3'" "HO3'" sing N N 18 0C "C2'" "O2'" sing N N 19 0C "C2'" "C1'" sing N N 20 0C "C2'" "H2'" sing N N 21 0C "O2'" "HO2'" sing N N 22 0C "C1'" N1 sing N N 23 0C "C1'" "H1'" sing N N 24 0C N1 C2 sing N N 25 0C N1 C6 sing N N 26 0C C2 O2 doub N N 27 0C C2 N3 sing N N 28 0C N3 C4 doub N N 29 0C C4 N4 sing N N 30 0C C4 C5 sing N N 31 0C N4 H41 sing N N 32 0C N4 H42 sing N N 33 0C C5 C6 doub N N 34 0C C5 H5 sing N N 35 0C C6 H6 sing N N 36 0G OP3 P sing N N 37 0G OP3 HOP3 sing N N 38 0G P OP1 doub N N 39 0G P OP2 sing N N 40 0G P "O5'" sing N N 41 0G OP2 HOP2 sing N N 42 0G "O5'" "C5'" sing N N 43 0G "C5'" "C4'" sing N N 44 0G "C5'" "H5'" sing N N 45 0G "C5'" "H5''" sing N N 46 0G "C4'" "O4'" sing N N 47 0G "C4'" "C3'" sing N N 48 0G "C4'" "H4'" sing N N 49 0G "O4'" "C1'" sing N N 50 0G "C3'" "O3'" sing N N 51 0G "C3'" "C2'" sing N N 52 0G "C3'" "H3'" sing N N 53 0G "O3'" "HO3'" sing N N 54 0G "C2'" "O2'" sing N N 55 0G "C2'" "C1'" sing N N 56 0G "C2'" "H2'" sing N N 57 0G "O2'" "HO2'" sing N N 58 0G "C1'" N9 sing N N 59 0G "C1'" "H1'" sing N N 60 0G N9 C8 sing Y N 61 0G N9 C4 sing Y N 62 0G C8 N7 doub Y N 63 0G C8 H8 sing N N 64 0G N7 C5 sing Y N 65 0G C6 O6 doub N N 66 0G C6 C5 sing N N 67 0G C6 N1 sing N N 68 0G C5 C4 doub Y N 69 0G N1 C2 sing N N 70 0G N1 H1 sing N N 71 0G C2 N2 sing N N 72 0G C2 N3 doub N N 73 0G N2 H21 sing N N 74 0G N2 H22 sing N N 75 0G N3 C4 sing N N 76 0U OP3 P sing N N 77 0U OP3 HOP3 sing N N 78 0U P OP1 doub N N 79 0U P OP2 sing N N 80 0U P "O5'" sing N N 81 0U OP2 HOP2 sing N N 82 0U "O5'" "C5'" sing N N 83 0U "C5'" "C4'" sing N N 84 0U "C5'" "H5'" sing N N 85 0U "C5'" "H5''" sing N N 86 0U "C4'" "O4'" sing N N 87 0U "C4'" "C3'" sing N N 88 0U "C4'" "H4'" sing N N 89 0U "O4'" "C1'" sing N N 90 0U "C3'" "O3'" sing N N 91 0U "C3'" "C2'" sing N N 92 0U "C3'" "H3'" sing N N 93 0U "O3'" "HO3'" sing N N 94 0U "C2'" "O2'" sing N N 95 0U "C2'" "C1'" sing N N 96 0U "C2'" "H2'" sing N N 97 0U "O2'" "HO2'" sing N N 98 0U "C1'" N1 sing N N 99 0U "C1'" "H1'" sing N N 100 0U N1 C2 sing N N 101 0U N1 C6 sing N N 102 0U C2 O2 doub N N 103 0U C2 N3 sing N N 104 0U N3 C4 sing N N 105 0U N3 H3 sing N N 106 0U C4 O4 doub N N 107 0U C4 C5 sing N N 108 0U C5 C6 doub N N 109 0U C5 H5 sing N N 110 0U C6 H6 sing N N 111 GOL C1 O1 sing N N 112 GOL C1 C2 sing N N 113 GOL C1 H11 sing N N 114 GOL C1 H12 sing N N 115 GOL O1 HO1 sing N N 116 GOL C2 O2 sing N N 117 GOL C2 C3 sing N N 118 GOL C2 H2 sing N N 119 GOL O2 HO2 sing N N 120 GOL C3 O3 sing N N 121 GOL C3 H31 sing N N 122 GOL C3 H32 sing N N 123 GOL O3 HO3 sing N N 124 HOH O H1 sing N N 125 HOH O H2 sing N N 126 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2GQ5 'z-form double helix' 2GQ5 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A 0C 1 1_555 B 0G 8 1_555 -0.529 -0.212 0.033 9.407 5.485 5.020 1 K_0C79:0G97_L K 79 ? L 97 ? 19 1 1 A 0U 2 1_555 B 0G 7 1_555 -2.415 -0.654 -0.103 14.575 17.281 1.305 2 K_0U80:0G96_L K 80 ? L 96 ? 28 1 1 A 0G 3 1_555 B 0U 6 1_555 2.129 -0.559 0.012 -8.230 11.699 1.661 3 K_0G81:0U95_L K 81 ? L 95 ? 28 1 1 A 0G 4 1_555 B 0C 5 1_555 0.149 -0.205 0.247 0.669 10.794 1.239 4 K_0G82:0C94_L K 82 ? L 94 ? 19 1 1 A 0G 5 1_555 B 0C 4 1_555 0.270 -0.246 0.029 -6.263 17.987 -2.299 5 K_0G83:0C93_L K 83 ? L 93 ? 19 1 1 A 0C 6 1_555 B 0G 3 1_555 -0.767 0.170 0.286 -4.587 8.993 -8.809 6 K_0C84:0G92_L K 84 ? L 92 ? ? 1 1 A 0G 7 1_555 B 0C 2 1_555 0.441 -0.059 0.324 -2.161 15.463 -3.486 7 K_0G85:0C91_L K 85 ? L 91 ? 19 1 1 A 0G 8 1_555 B 0C 1 1_555 -0.016 -0.116 -0.001 -9.057 16.107 5.853 8 K_0G86:0C90_L K 86 ? L 90 ? 19 1 1 C 0C 1 1_555 D 0G 8 1_555 -0.139 -0.167 0.057 -2.497 -4.882 3.478 9 M_0C79:0G97_N M 79 ? N 97 ? 19 1 1 C 0U 2 1_555 D 0G 7 1_555 -2.293 -0.617 -0.226 12.567 10.647 1.451 10 M_0U80:0G96_N M 80 ? N 96 ? 28 1 1 C 0G 3 1_555 D 0U 6 1_555 2.238 -0.705 -0.146 -5.145 10.223 1.993 11 M_0G81:0U95_N M 81 ? N 95 ? 28 1 1 C 0G 4 1_555 D 0C 5 1_555 0.254 -0.159 0.045 -1.514 8.992 3.560 12 M_0G82:0C94_N M 82 ? N 94 ? 19 1 1 C 0G 5 1_555 D 0C 4 1_555 0.295 -0.204 -0.023 -2.279 13.107 0.679 13 M_0G83:0C93_N M 83 ? N 93 ? 19 1 1 C 0C 6 1_555 D 0G 3 1_555 -0.264 -0.205 -0.029 2.092 12.922 1.720 14 M_0C84:0G92_N M 84 ? N 92 ? 19 1 1 C 0G 7 1_555 D 0C 2 1_555 0.226 -0.079 0.139 -7.779 19.834 -3.361 15 M_0G85:0C91_N M 85 ? N 91 ? 19 1 1 C 0G 8 1_555 D 0C 1 1_555 0.136 -0.211 0.130 -6.990 8.580 2.348 16 M_0G86:0C90_N M 86 ? N 90 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A 0C 1 1_555 B 0G 8 1_555 A 0U 2 1_555 B 0G 7 1_555 0.147 -1.372 3.155 -1.633 -5.544 -35.654 2.947 0.021 2.920 8.982 -2.646 -36.104 1 KK_0C790U80:0G960G97_LL K 79 ? L 97 ? K 80 ? L 96 ? 1 A 0U 2 1_555 B 0G 7 1_555 A 0G 3 1_555 B 0U 6 1_555 0.266 -2.762 3.304 -3.261 -18.037 -19.039 9.378 -0.017 0.556 43.584 -7.880 -26.370 2 KK_0U800G81:0U950G96_LL K 80 ? L 96 ? K 81 ? L 95 ? 1 A 0G 3 1_555 B 0U 6 1_555 A 0G 4 1_555 B 0C 5 1_555 0.257 -1.585 3.009 -2.044 -1.675 -35.038 2.854 0.148 2.942 2.778 -3.389 -35.135 3 KK_0G810G82:0C940U95_LL K 81 ? L 95 ? K 82 ? L 94 ? 1 A 0G 4 1_555 B 0C 5 1_555 A 0G 5 1_555 B 0C 4 1_555 -0.451 -1.829 3.285 2.030 -4.876 -32.746 3.999 -0.460 3.011 8.578 3.572 -33.157 4 KK_0G820G83:0C930C94_LL K 82 ? L 94 ? K 83 ? L 93 ? 1 A 0G 5 1_555 B 0C 4 1_555 A 0C 6 1_555 B 0G 3 1_555 -0.865 -1.339 3.208 4.802 -4.809 -38.080 2.599 -0.732 3.105 7.299 7.288 -38.660 5 KK_0G830C84:0G920C93_LL K 83 ? L 93 ? K 84 ? L 92 ? 1 A 0C 6 1_555 B 0G 3 1_555 A 0G 7 1_555 B 0C 2 1_555 0.239 -1.936 2.998 -0.254 -8.389 -22.458 6.875 0.508 2.146 20.637 -0.625 -23.956 6 KK_0C840G85:0C910G92_LL K 84 ? L 92 ? K 85 ? L 91 ? 1 A 0G 7 1_555 B 0C 2 1_555 A 0G 8 1_555 B 0C 1 1_555 0.771 -1.513 3.489 0.836 -8.332 -35.499 3.590 1.351 3.049 13.436 1.348 -36.442 7 KK_0G850G86:0C900C91_LL K 85 ? L 91 ? K 86 ? L 90 ? 1 C 0C 1 1_555 D 0G 8 1_555 C 0U 2 1_555 D 0G 7 1_555 0.111 -1.263 2.952 0.719 -1.691 -36.966 2.193 0.261 2.890 2.665 1.134 -37.010 8 MM_0C790U80:0G960G97_NN M 79 ? N 97 ? M 80 ? N 96 ? 1 C 0U 2 1_555 D 0G 7 1_555 C 0G 3 1_555 D 0U 6 1_555 0.302 -2.584 3.464 -3.104 -14.001 -20.401 9.474 -0.070 1.445 34.551 -7.659 -24.893 9 MM_0U800G81:0U950G96_NN M 80 ? N 96 ? M 81 ? N 95 ? 1 C 0G 3 1_555 D 0U 6 1_555 C 0G 4 1_555 D 0C 5 1_555 0.378 -1.479 3.252 -1.348 -1.729 -34.395 2.762 0.431 3.188 2.921 -2.276 -34.463 10 MM_0G810G82:0C940U95_NN M 81 ? N 95 ? M 82 ? N 94 ? 1 C 0G 4 1_555 D 0C 5 1_555 C 0G 5 1_555 D 0C 4 1_555 -0.407 -1.707 3.230 0.488 -7.113 -32.569 4.083 -0.634 2.811 12.496 0.857 -33.320 11 MM_0G820G83:0C930C94_NN M 82 ? N 94 ? M 83 ? N 93 ? 1 C 0G 5 1_555 D 0C 4 1_555 C 0C 6 1_555 D 0G 3 1_555 0.284 -1.311 3.148 -0.597 -4.366 -34.710 2.799 0.388 2.970 7.282 -0.996 -34.980 12 MM_0G830C84:0G920C93_NN M 83 ? N 93 ? M 84 ? N 92 ? 1 C 0C 6 1_555 D 0G 3 1_555 C 0G 7 1_555 D 0C 2 1_555 -0.902 -1.677 3.264 1.236 -15.527 -30.994 4.950 -1.348 2.230 27.022 2.150 -34.602 13 MM_0C840G85:0C910G92_NN M 84 ? N 92 ? M 85 ? N 91 ? 1 C 0G 7 1_555 D 0C 2 1_555 C 0G 8 1_555 D 0C 1 1_555 0.980 -1.376 3.128 -0.726 -5.735 -35.586 2.978 1.488 2.898 9.307 -1.178 -36.037 14 MM_0G850G86:0C900C91_NN M 85 ? N 91 ? M 86 ? N 90 ? # _pdbx_initial_refinement_model.accession_code 439D _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'NDB entry AR0012' # _atom_sites.entry_id 2GQ5 _atom_sites.fract_transf_matrix[1][1] 0.037842 _atom_sites.fract_transf_matrix[1][2] 0.002328 _atom_sites.fract_transf_matrix[1][3] 0.008575 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026399 _atom_sites.fract_transf_matrix[2][3] 0.011923 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024672 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P # loop_