HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-APR-06 2GQF TITLE CRYSTAL STRUCTURE OF FLAVOPROTEIN HI0933 FROM HAEMOPHILUS INFLUENZAE TITLE 2 RD COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HI0933; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: HI0933; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, FAD-UTILIZING PROTEIN, FLAVOPROTEIN, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, NYSGXRC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.M.MULICHAK,Y.PATSKOVSKY,L.J.KEEFE,S.C.ALMO,S.K.BURLEY,NEW YORK SGX AUTHOR 2 RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 30-OCT-24 2GQF 1 REMARK REVDAT 5 03-FEB-21 2GQF 1 AUTHOR REMARK SEQADV LINK REVDAT 4 18-OCT-17 2GQF 1 REMARK REVDAT 3 13-JUL-11 2GQF 1 VERSN REVDAT 2 24-FEB-09 2GQF 1 VERSN REVDAT 1 30-MAY-06 2GQF 0 JRNL AUTH A.M.MULICHAK,Y.PATSKOVSKY,L.J.KEEFE,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL FLAVOPROTEIN HI0933 FROM JRNL TITL 2 HAEMOPHILUS INFLUENZAE RD. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 38390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1952 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3104 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 196 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : LIGAND.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GQF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979228 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40093 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, 0.1M BIS-TRIS, PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.19333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.59667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 67.19333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.59667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.19333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 33.59667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 67.19333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.59667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 160.73000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 80.36500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 139.19626 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -33.59667 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 80.36500 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 139.19626 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -33.59667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 441 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 506 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 556 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A 1 CG SE CE REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 ASN A 140 CG OD1 ND2 REMARK 470 GLU A 142 CG CD OE1 OE2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 GLN A 273 CG CD OE1 NE2 REMARK 470 GLN A 276 CG CD OE1 NE2 REMARK 470 LYS A 293 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 12 54.80 -101.68 REMARK 500 CYS A 51 100.33 67.22 REMARK 500 THR A 54 -176.45 -177.13 REMARK 500 ASN A 151 -118.97 66.01 REMARK 500 SER A 212 129.20 -39.54 REMARK 500 ASN A 230 -173.27 -172.69 REMARK 500 SER A 240 -155.44 -136.20 REMARK 500 THR A 254 -14.91 86.00 REMARK 500 ASN A 264 -76.43 -56.82 REMARK 500 SER A 278 58.71 -155.87 REMARK 500 ASN A 312 42.36 -83.08 REMARK 500 MSE A 358 4.24 85.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TNYSGXRC-T1138 RELATED DB: TARGETDB REMARK 900 RELATED ID: NYSGXRC-T1138 RELATED DB: TARGETDB DBREF 2GQF A 1 401 UNP P44941 Y933_HAEIN 1 401 SEQADV 2GQF MSE A 1 UNP P44941 MET 1 MODIFIED RESIDUE SEQADV 2GQF MSE A 45 UNP P44941 MET 45 MODIFIED RESIDUE SEQADV 2GQF MSE A 114 UNP P44941 MET 114 MODIFIED RESIDUE SEQADV 2GQF MSE A 169 UNP P44941 MET 169 MODIFIED RESIDUE SEQADV 2GQF MSE A 282 UNP P44941 MET 282 MODIFIED RESIDUE SEQADV 2GQF MSE A 345 UNP P44941 MET 345 MODIFIED RESIDUE SEQADV 2GQF MSE A 358 UNP P44941 MET 358 MODIFIED RESIDUE SEQRES 1 A 401 MSE SER GLN TYR SER GLU ASN ILE ILE ILE GLY ALA GLY SEQRES 2 A 401 ALA ALA GLY LEU PHE CYS ALA ALA GLN LEU ALA LYS LEU SEQRES 3 A 401 GLY LYS SER VAL THR VAL PHE ASP ASN GLY LYS LYS ILE SEQRES 4 A 401 GLY ARG LYS ILE LEU MSE SER GLY GLY GLY PHE CYS ASN SEQRES 5 A 401 PHE THR ASN LEU GLU VAL THR PRO ALA HIS TYR LEU SER SEQRES 6 A 401 GLN ASN PRO HIS PHE VAL LYS SER ALA LEU ALA ARG TYR SEQRES 7 A 401 THR ASN TRP ASP PHE ILE SER LEU VAL ALA GLU GLN GLY SEQRES 8 A 401 ILE THR TYR HIS GLU LYS GLU LEU GLY GLN LEU PHE CYS SEQRES 9 A 401 ASP GLU GLY ALA GLU GLN ILE VAL GLU MSE LEU LYS SER SEQRES 10 A 401 GLU CYS ASP LYS TYR GLY ALA LYS ILE LEU LEU ARG SER SEQRES 11 A 401 GLU VAL SER GLN VAL GLU ARG ILE GLN ASN ASP GLU LYS SEQRES 12 A 401 VAL ARG PHE VAL LEU GLN VAL ASN SER THR GLN TRP GLN SEQRES 13 A 401 CYS LYS ASN LEU ILE VAL ALA THR GLY GLY LEU SER MSE SEQRES 14 A 401 PRO GLY LEU GLY ALA THR PRO PHE GLY TYR GLN ILE ALA SEQRES 15 A 401 GLU GLN PHE GLY ILE PRO VAL ILE PRO PRO ARG ALA SER SEQRES 16 A 401 LEU VAL PRO PHE THR TYR ARG GLU THR ASP LYS PHE LEU SEQRES 17 A 401 THR ALA LEU SER GLY ILE SER LEU PRO VAL THR ILE THR SEQRES 18 A 401 ALA LEU CYS GLY LYS SER PHE TYR ASN GLN LEU LEU PHE SEQRES 19 A 401 THR HIS ARG GLY ILE SER GLY PRO ALA VAL LEU GLN ILE SEQRES 20 A 401 SER ASN TYR TRP GLN PRO THR GLU SER VAL GLU ILE ASP SEQRES 21 A 401 LEU LEU PRO ASN HIS ASN VAL GLU GLU GLU ILE ASN GLN SEQRES 22 A 401 ALA LYS GLN SER SER PRO LYS GLN MSE LEU LYS THR ILE SEQRES 23 A 401 LEU VAL ARG LEU LEU PRO LYS LYS LEU VAL GLU LEU TRP SEQRES 24 A 401 ILE GLU GLN GLY ILE VAL GLN ASP GLU VAL ILE ALA ASN SEQRES 25 A 401 ILE SER LYS VAL ARG VAL LYS ASN LEU VAL ASP PHE ILE SEQRES 26 A 401 HIS HIS TRP GLU PHE THR PRO ASN GLY THR GLU GLY TYR SEQRES 27 A 401 ARG THR ALA GLU VAL THR MSE GLY GLY VAL ASP THR LYS SEQRES 28 A 401 VAL ILE SER SER LYS THR MSE GLU SER ASN GLN VAL SER SEQRES 29 A 401 GLY LEU TYR PHE ILE GLY GLU VAL LEU ASP VAL THR GLY SEQRES 30 A 401 TRP LEU GLY GLY TYR ASN PHE GLN TRP ALA TRP SER SER SEQRES 31 A 401 ALA TYR ALA CYS ALA LEU SER ILE SER ARG GLN MODRES 2GQF MSE A 1 MET SELENOMETHIONINE MODRES 2GQF MSE A 45 MET SELENOMETHIONINE MODRES 2GQF MSE A 114 MET SELENOMETHIONINE MODRES 2GQF MSE A 169 MET SELENOMETHIONINE MODRES 2GQF MSE A 282 MET SELENOMETHIONINE MODRES 2GQF MSE A 345 MET SELENOMETHIONINE MODRES 2GQF MSE A 358 MET SELENOMETHIONINE HET MSE A 1 5 HET MSE A 45 8 HET MSE A 114 8 HET MSE A 169 8 HET MSE A 282 8 HET MSE A 345 8 HET MSE A 358 8 HET SO4 A 402 5 HET FAD A 403 53 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 SO4 O4 S 2- FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 HOH *196(H2 O) HELIX 1 1 GLY A 13 LEU A 26 1 14 HELIX 2 2 GLY A 40 SER A 46 1 7 HELIX 3 3 GLY A 47 PHE A 50 5 4 HELIX 4 4 THR A 59 ALA A 61 5 3 HELIX 5 5 VAL A 71 TYR A 78 1 8 HELIX 6 6 THR A 79 GLN A 90 1 12 HELIX 7 7 ALA A 108 GLY A 123 1 16 HELIX 8 8 MSE A 169 GLY A 173 5 5 HELIX 9 9 PRO A 176 PHE A 185 1 10 HELIX 10 10 ARG A 202 SER A 212 5 11 HELIX 11 11 GLY A 241 SER A 248 1 8 HELIX 12 12 ASN A 266 SER A 278 1 13 HELIX 13 13 MSE A 282 VAL A 288 1 7 HELIX 14 14 PRO A 292 GLN A 302 1 11 HELIX 15 15 VAL A 309 ILE A 313 5 5 HELIX 16 16 SER A 314 HIS A 327 1 14 HELIX 17 17 THR A 350 ILE A 353 5 4 HELIX 18 18 GLY A 370 LEU A 373 5 4 HELIX 19 19 GLY A 381 ARG A 400 1 20 SHEET 1 A 4 SER A 2 TYR A 4 0 SHEET 2 A 4 THR A 153 CYS A 157 1 O GLN A 156 N GLN A 3 SHEET 3 A 4 PHE A 146 VAL A 150 -1 N LEU A 148 O TRP A 155 SHEET 4 A 4 VAL A 132 ARG A 137 -1 N GLU A 136 O VAL A 147 SHEET 1 B 5 LYS A 125 LEU A 127 0 SHEET 2 B 5 VAL A 30 PHE A 33 1 N VAL A 32 O LEU A 127 SHEET 3 B 5 ASN A 7 ILE A 10 1 N ILE A 9 O PHE A 33 SHEET 4 B 5 ASN A 159 VAL A 162 1 O ILE A 161 N ILE A 8 SHEET 5 B 5 LEU A 366 PHE A 368 1 O TYR A 367 N VAL A 162 SHEET 1 C 3 THR A 54 ASN A 55 0 SHEET 2 C 3 GLN A 101 CYS A 104 -1 O LEU A 102 N THR A 54 SHEET 3 C 3 TYR A 94 GLU A 96 -1 N HIS A 95 O PHE A 103 SHEET 1 D 2 TYR A 63 LEU A 64 0 SHEET 2 D 2 THR A 376 GLY A 377 -1 O THR A 376 N LEU A 64 SHEET 1 E 2 VAL A 189 SER A 195 0 SHEET 2 E 2 VAL A 343 VAL A 348 -1 O GLY A 347 N ILE A 190 SHEET 1 F 7 TRP A 328 PHE A 330 0 SHEET 2 F 7 VAL A 257 ASP A 260 -1 N VAL A 257 O PHE A 330 SHEET 3 F 7 SER A 215 ALA A 222 -1 N THR A 221 O GLU A 258 SHEET 4 F 7 SER A 227 PHE A 234 -1 O ASN A 230 N VAL A 218 SHEET 5 F 7 GLY A 238 SER A 240 -1 O SER A 240 N LEU A 233 SHEET 6 F 7 PHE A 199 THR A 200 -1 N PHE A 199 O ILE A 239 SHEET 7 F 7 GLY A 334 THR A 335 -1 O GLY A 334 N THR A 200 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C LEU A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N SER A 46 1555 1555 1.33 LINK C GLU A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N LEU A 115 1555 1555 1.33 LINK C SER A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N PRO A 170 1555 1555 1.34 LINK C GLN A 281 N MSE A 282 1555 1555 1.33 LINK C MSE A 282 N LEU A 283 1555 1555 1.33 LINK C THR A 344 N MSE A 345 1555 1555 1.33 LINK C MSE A 345 N GLY A 346 1555 1555 1.32 LINK C THR A 357 N MSE A 358 1555 1555 1.33 LINK C MSE A 358 N GLU A 359 1555 1555 1.33 SITE 1 AC1 3 SER A 278 GLN A 281 ARG A 289 SITE 1 AC2 36 ILE A 10 GLY A 11 GLY A 13 ALA A 14 SITE 2 AC2 36 ALA A 15 ASP A 34 ASN A 35 ARG A 41 SITE 3 AC2 36 LYS A 42 MSE A 45 SER A 46 GLY A 47 SITE 4 AC2 36 ASN A 52 GLU A 131 VAL A 132 ALA A 163 SITE 5 AC2 36 THR A 164 GLY A 165 SER A 168 MSE A 169 SITE 6 AC2 36 THR A 175 PHE A 177 GLU A 342 GLY A 370 SITE 7 AC2 36 GLU A 371 GLY A 381 ASN A 383 PHE A 384 SITE 8 AC2 36 HOH A 408 HOH A 421 HOH A 426 HOH A 427 SITE 9 AC2 36 HOH A 429 HOH A 449 HOH A 543 HOH A 546 CRYST1 160.730 160.730 100.790 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006222 0.003592 0.000000 0.00000 SCALE2 0.000000 0.007184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009922 0.00000 HETATM 1 N MSE A 1 40.882 99.907 14.972 1.00 63.30 N HETATM 2 CA MSE A 1 42.259 99.687 14.439 1.00 63.11 C HETATM 3 C MSE A 1 42.211 99.299 12.963 1.00 63.11 C HETATM 4 O MSE A 1 41.451 98.409 12.563 1.00 64.02 O HETATM 5 CB MSE A 1 42.966 98.595 15.247 1.00 62.19 C