HEADER CONTRACTILE PROTEIN 21-APR-06 2GQH TITLE SOLUTION STRUCTURE OF THE 15TH IG-LIKE DOMAIN OF HUMAN KIAA1556 TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA1556 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG-LIKE DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1556; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051025-01; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS BETA-SANDWICH, IG-FOLD, OBSCURIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, CONTRACTILE KEYWDS 4 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2GQH 1 REMARK SEQADV REVDAT 2 24-FEB-09 2GQH 1 VERSN REVDAT 1 21-OCT-06 2GQH 0 JRNL AUTH C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 15TH IG-LIKE DOMAIN OF HUMAN JRNL TITL 2 KIAA1556 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DELTA NMR 4.3.2, CYANA 2.0.17 REMARK 3 AUTHORS : JEOL (DELTA NMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GQH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037429. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.18MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3, 10% REMARK 210 D2O; 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.934, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 98.66 -61.55 REMARK 500 1 ALA A 23 -178.32 -67.44 REMARK 500 1 ALA A 34 128.21 -36.72 REMARK 500 1 ALA A 35 147.12 -174.08 REMARK 500 1 ASN A 73 146.26 -37.04 REMARK 500 2 PHE A 10 105.01 -58.38 REMARK 500 2 LYS A 41 37.88 -83.15 REMARK 500 2 ALA A 45 79.09 -104.99 REMARK 500 3 PHE A 10 95.30 -64.60 REMARK 500 3 ARG A 97 33.61 -91.42 REMARK 500 3 SER A 106 109.45 -54.08 REMARK 500 4 SER A 5 -54.80 -121.58 REMARK 500 4 LYS A 33 149.92 -174.59 REMARK 500 4 ARG A 55 75.98 -111.74 REMARK 500 4 ASN A 73 142.52 -36.27 REMARK 500 4 GLN A 82 -74.96 -51.62 REMARK 500 4 PHE A 98 94.48 -67.83 REMARK 500 5 ALA A 8 136.88 -173.27 REMARK 500 5 ASN A 16 -176.23 -65.96 REMARK 500 5 CYS A 29 128.63 -172.26 REMARK 500 5 ALA A 34 125.76 -34.20 REMARK 500 5 ALA A 96 108.59 -55.05 REMARK 500 5 PRO A 104 85.11 -69.77 REMARK 500 6 LEU A 14 161.96 -45.99 REMARK 500 6 ALA A 25 173.56 -59.49 REMARK 500 6 THR A 26 118.01 -165.26 REMARK 500 6 LYS A 33 144.11 -174.57 REMARK 500 6 ALA A 34 123.56 -38.08 REMARK 500 6 GLN A 56 118.03 -161.50 REMARK 500 7 PHE A 10 97.54 -65.27 REMARK 500 7 GLU A 18 128.73 -175.23 REMARK 500 8 SER A 3 -45.61 -132.32 REMARK 500 8 ALA A 25 176.04 -54.91 REMARK 500 8 THR A 26 112.85 -168.13 REMARK 500 8 ASP A 101 103.27 -48.38 REMARK 500 9 ASN A 16 153.18 -49.69 REMARK 500 9 LYS A 33 148.56 -170.01 REMARK 500 9 CYS A 80 46.54 -108.61 REMARK 500 10 THR A 26 113.38 -160.64 REMARK 500 10 CYS A 80 -67.19 -99.06 REMARK 500 11 ALA A 34 119.18 -36.54 REMARK 500 11 ALA A 69 -179.70 -172.29 REMARK 500 11 ARG A 97 115.59 -164.38 REMARK 500 12 ALA A 23 167.05 -48.24 REMARK 500 12 ALA A 34 116.40 -37.28 REMARK 500 12 LYS A 41 41.26 -81.45 REMARK 500 12 LEU A 43 41.60 -88.51 REMARK 500 12 ALA A 69 -175.28 -172.61 REMARK 500 12 GLN A 82 -61.78 -98.40 REMARK 500 13 SER A 32 -30.62 -37.33 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001528.3 RELATED DB: TARGETDB DBREF 2GQH A 8 101 GB 10047177 BAB13382 1253 1346 SEQADV 2GQH GLY A 1 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 2 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 3 GB 10047177 CLONING ARTIFACT SEQADV 2GQH GLY A 4 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 5 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 6 GB 10047177 CLONING ARTIFACT SEQADV 2GQH GLY A 7 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 102 GB 10047177 CLONING ARTIFACT SEQADV 2GQH GLY A 103 GB 10047177 CLONING ARTIFACT SEQADV 2GQH PRO A 104 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 105 GB 10047177 CLONING ARTIFACT SEQADV 2GQH SER A 106 GB 10047177 CLONING ARTIFACT SEQADV 2GQH GLY A 107 GB 10047177 CLONING ARTIFACT SEQRES 1 A 107 GLY SER SER GLY SER SER GLY ALA ARG PHE THR GLU GLY SEQRES 2 A 107 LEU ARG ASN GLU GLU ALA MET GLU GLY ALA THR ALA THR SEQRES 3 A 107 LEU GLN CYS GLU LEU SER LYS ALA ALA PRO VAL GLU TRP SEQRES 4 A 107 ARG LYS GLY LEU GLU ALA LEU ARG ASP GLY ASP LYS TYR SEQRES 5 A 107 SER LEU ARG GLN ASP GLY ALA VAL CYS GLU LEU GLN ILE SEQRES 6 A 107 HIS GLY LEU ALA MET ALA ASP ASN GLY VAL TYR SER CYS SEQRES 7 A 107 VAL CYS GLY GLN GLU ARG THR SER ALA THR LEU THR VAL SEQRES 8 A 107 ARG ALA LEU PRO ALA ARG PHE ILE GLU ASP SER GLY PRO SEQRES 9 A 107 SER SER GLY SHEET 1 A 5 GLU A 17 MET A 20 0 SHEET 2 A 5 ARG A 84 ARG A 92 1 O THR A 90 N ALA A 19 SHEET 3 A 5 GLY A 74 VAL A 79 -1 N CYS A 78 O THR A 85 SHEET 4 A 5 GLU A 38 LYS A 41 -1 N ARG A 40 O SER A 77 SHEET 5 A 5 GLU A 44 ALA A 45 -1 O GLU A 44 N LYS A 41 SHEET 1 B 3 THR A 24 CYS A 29 0 SHEET 2 B 3 VAL A 60 HIS A 66 -1 O CYS A 61 N CYS A 29 SHEET 3 B 3 TYR A 52 ASP A 57 -1 N SER A 53 O GLN A 64 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1