HEADER TRANSCRIPTION 30-APR-06 2GUH TITLE CRYSTAL STRUCTURE OF THE PUTATIVE TETR-FAMILY TRANSCRIPTIONAL TITLE 2 REGULATOR FROM RHODOCOCCUS SP. RHA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS SP.; SOURCE 3 ORGANISM_TAXID: 101510; SOURCE 4 STRAIN: RHA1; SOURCE 5 GENE: RHA6424; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET11A KEYWDS HELIX-TURN-HELIX, TETR FOLD, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,A.JOACHIMIAK,T.SKARINA,H.ZHENG,A.EDWARDS,A.SAVCHENKO,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 2GUH 1 VERSN REVDAT 2 24-FEB-09 2GUH 1 VERSN REVDAT 1 30-MAY-06 2GUH 0 JRNL AUTH Y.KIM,A.JOACHIMIAK,T.SKARINA,H.ZHENG,A.EDWARDS,A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF THE PUTATIVE TETR-FAMILY JRNL TITL 2 TRANSCRIPTIONAL REGULATOR FROM RHODOCOCCUS SP. RHA1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0000 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 57196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6421 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4093 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 437 REMARK 3 BIN FREE R VALUE : 0.2290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2753 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 450 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : 0.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.175 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3194 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4340 ; 1.406 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 427 ; 5.152 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 147 ;32.964 ;22.313 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 585 ;14.873 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;18.901 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2514 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1837 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 372 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.129 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 64 ; 0.201 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 63 ; 0.182 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2007 ; 0.874 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3252 ; 1.488 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1187 ; 2.179 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1088 ; 3.320 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 37.8980 17.1650 21.9180 REMARK 3 T TENSOR REMARK 3 T11: -0.0138 T22: -0.0204 REMARK 3 T33: -0.0103 T12: 0.0003 REMARK 3 T13: -0.0177 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.7271 L22: 0.9682 REMARK 3 L33: 0.7767 L12: -0.0133 REMARK 3 L13: 0.0334 L23: 0.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: 0.0798 S13: -0.0735 REMARK 3 S21: -0.1464 S22: 0.0063 S23: 0.0857 REMARK 3 S31: 0.0600 S32: -0.0636 S33: -0.0309 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 191 REMARK 3 ORIGIN FOR THE GROUP (A): 51.2190 35.1860 24.7110 REMARK 3 T TENSOR REMARK 3 T11: -0.0307 T22: -0.0386 REMARK 3 T33: -0.0256 T12: -0.0071 REMARK 3 T13: 0.0013 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.8897 L22: 1.0853 REMARK 3 L33: 1.0769 L12: 0.2326 REMARK 3 L13: 0.0901 L23: 0.0458 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.0791 S13: 0.0443 REMARK 3 S21: -0.1180 S22: 0.0169 S23: -0.1135 REMARK 3 S31: -0.1241 S32: 0.1124 S33: 0.0096 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 SI111 REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63688 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 23.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, RESOLVE, SHELXE, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG3350, 0.2M MGCL2, 0.1M BIS- REMARK 280 TRIS, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.12950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.93750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.06500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.93750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.12950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.06500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 VAL A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 ASP A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 PRO A 10 REMARK 465 VAL A 11 REMARK 465 LYS A 12 REMARK 465 SER A 192 REMARK 465 MSE B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 ARG B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 VAL B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 ASP B 4 REMARK 465 PRO B 5 REMARK 465 GLY B 6 REMARK 465 THR B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 VAL B 11 REMARK 465 LYS B 12 REMARK 465 ARG B 13 REMARK 465 SER B 192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 564 O HOH A 734 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 114 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 114 67.88 -47.22 REMARK 500 MSE A 130 -68.20 -105.62 REMARK 500 GLN A 166 -120.52 53.62 REMARK 500 MSE B 130 -63.69 -102.71 REMARK 500 GLN B 166 -123.33 49.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 599 DISTANCE = 5.64 ANGSTROMS REMARK 525 HOH A 670 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 671 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 5.12 ANGSTROMS REMARK 525 HOH A 705 DISTANCE = 5.61 ANGSTROMS REMARK 525 HOH A 718 DISTANCE = 5.62 ANGSTROMS REMARK 525 HOH B 638 DISTANCE = 5.52 ANGSTROMS REMARK 525 HOH B 684 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B 686 DISTANCE = 5.63 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 723 O REMARK 620 2 HOH A 720 O 83.2 REMARK 620 3 HOH A 715 O 81.7 91.8 REMARK 620 4 HOH A 729 O 79.4 162.4 88.5 REMARK 620 5 LEU A 138 O 93.9 83.2 173.7 95.1 REMARK 620 6 HOH A 708 O 171.2 96.5 89.6 101.0 94.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 EDO A 506 O1 REMARK 620 2 SER A 105 OG 94.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 507 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5898 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THE PROTEIN HAS NOT BEEN DEPOSITED REMARK 999 INTO ANY SEQUENCE DATABASE AT THE TIME OF PROCESSING. DBREF 2GUH A 2 190 UNP Q0S8Y3 Q0S8Y3_RHOSR 2 190 DBREF 2GUH B 2 190 UNP Q0S8Y3 Q0S8Y3_RHOSR 2 190 SEQRES 1 A 214 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 214 ARG GLU ASN LEU TYR PHE GLN GLY HIS VAL THR SER ASP SEQRES 3 A 214 PRO GLY THR ALA ALA PRO VAL LYS ARG THR ALA GLU GLN SEQRES 4 A 214 SER ARG SER LEU ILE VAL ASP ALA ALA GLY ARG ALA PHE SEQRES 5 A 214 ALA THR ARG PRO TYR ARG GLU ILE THR LEU LYS ASP ILE SEQRES 6 A 214 ALA GLU ASP ALA GLY VAL SER ALA PRO LEU ILE ILE LYS SEQRES 7 A 214 TYR PHE GLY SER LYS GLU GLN LEU PHE ASP ALA LEU VAL SEQRES 8 A 214 ASP PHE ARG ALA ALA ALA GLU ILE VAL PHE SER GLY PRO SEQRES 9 A 214 LEU ASP GLY LEU GLY GLU ARG MSE VAL SER MSE PHE ALA SEQRES 10 A 214 ARG PRO LEU GLU PRO TYR LYS PRO LEU SER LEU ASN ILE SEQRES 11 A 214 LEU PHE MSE SER GLY PRO SER GLU GLU SER SER ARG LYS SEQRES 12 A 214 LEU ARG ALA ASN TYR SER ALA GLN MSE ILE ASP ALA LEU SEQRES 13 A 214 ALA GLU ARG LEU PRO GLY ARG ASP ALA ARG LEU ARG ALA SEQRES 14 A 214 GLU LEU VAL MSE SER MSE LEU THR GLY LEU ALA VAL MSE SEQRES 15 A 214 ARG ARG LYS MSE MSE GLN GLU HIS ALA THR GLY THR PRO SEQRES 16 A 214 GLU GLU VAL VAL ALA HIS TYR ALA PRO LEU VAL GLN GLU SEQRES 17 A 214 LEU LEU ASP GLY GLY SER SEQRES 1 B 214 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 214 ARG GLU ASN LEU TYR PHE GLN GLY HIS VAL THR SER ASP SEQRES 3 B 214 PRO GLY THR ALA ALA PRO VAL LYS ARG THR ALA GLU GLN SEQRES 4 B 214 SER ARG SER LEU ILE VAL ASP ALA ALA GLY ARG ALA PHE SEQRES 5 B 214 ALA THR ARG PRO TYR ARG GLU ILE THR LEU LYS ASP ILE SEQRES 6 B 214 ALA GLU ASP ALA GLY VAL SER ALA PRO LEU ILE ILE LYS SEQRES 7 B 214 TYR PHE GLY SER LYS GLU GLN LEU PHE ASP ALA LEU VAL SEQRES 8 B 214 ASP PHE ARG ALA ALA ALA GLU ILE VAL PHE SER GLY PRO SEQRES 9 B 214 LEU ASP GLY LEU GLY GLU ARG MSE VAL SER MSE PHE ALA SEQRES 10 B 214 ARG PRO LEU GLU PRO TYR LYS PRO LEU SER LEU ASN ILE SEQRES 11 B 214 LEU PHE MSE SER GLY PRO SER GLU GLU SER SER ARG LYS SEQRES 12 B 214 LEU ARG ALA ASN TYR SER ALA GLN MSE ILE ASP ALA LEU SEQRES 13 B 214 ALA GLU ARG LEU PRO GLY ARG ASP ALA ARG LEU ARG ALA SEQRES 14 B 214 GLU LEU VAL MSE SER MSE LEU THR GLY LEU ALA VAL MSE SEQRES 15 B 214 ARG ARG LYS MSE MSE GLN GLU HIS ALA THR GLY THR PRO SEQRES 16 B 214 GLU GLU VAL VAL ALA HIS TYR ALA PRO LEU VAL GLN GLU SEQRES 17 B 214 LEU LEU ASP GLY GLY SER MODRES 2GUH MSE A 90 MET SELENOMETHIONINE MODRES 2GUH MSE A 93 MET SELENOMETHIONINE MODRES 2GUH MSE A 111 MET SELENOMETHIONINE MODRES 2GUH MSE A 130 MET SELENOMETHIONINE MODRES 2GUH MSE A 151 MET SELENOMETHIONINE MODRES 2GUH MSE A 153 MET SELENOMETHIONINE MODRES 2GUH MSE A 160 MET SELENOMETHIONINE MODRES 2GUH MSE A 164 MET SELENOMETHIONINE MODRES 2GUH MSE A 165 MET SELENOMETHIONINE MODRES 2GUH MSE B 90 MET SELENOMETHIONINE MODRES 2GUH MSE B 93 MET SELENOMETHIONINE MODRES 2GUH MSE B 111 MET SELENOMETHIONINE MODRES 2GUH MSE B 130 MET SELENOMETHIONINE MODRES 2GUH MSE B 151 MET SELENOMETHIONINE MODRES 2GUH MSE B 153 MET SELENOMETHIONINE MODRES 2GUH MSE B 160 MET SELENOMETHIONINE MODRES 2GUH MSE B 164 MET SELENOMETHIONINE MODRES 2GUH MSE B 165 MET SELENOMETHIONINE HET MSE A 90 16 HET MSE A 93 16 HET MSE A 111 8 HET MSE A 130 8 HET MSE A 151 8 HET MSE A 153 8 HET MSE A 160 8 HET MSE A 164 8 HET MSE A 165 16 HET MSE B 90 8 HET MSE B 93 16 HET MSE B 111 8 HET MSE B 130 8 HET MSE B 151 8 HET MSE B 153 8 HET MSE B 160 8 HET MSE B 164 8 HET MSE B 165 8 HET MG A 501 1 HET MG A 502 1 HET MG B 503 1 HET EDO B 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO B 507 4 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 MG 3(MG 2+) FORMUL 6 EDO 4(C2 H6 O2) FORMUL 10 HOH *450(H2 O) HELIX 1 1 THR A 14 ARG A 33 1 20 HELIX 2 2 PRO A 34 ILE A 38 5 5 HELIX 3 3 THR A 39 GLY A 48 1 10 HELIX 4 4 SER A 50 GLY A 59 1 10 HELIX 5 5 SER A 60 VAL A 69 1 10 HELIX 6 6 PHE A 71 PHE A 79 1 9 HELIX 7 7 GLY A 85 ALA A 95 1 11 HELIX 8 8 PRO A 103 MSE A 111 1 9 HELIX 9 9 GLU A 116 MSE A 130 1 15 HELIX 10 10 MSE A 130 LEU A 138 1 9 HELIX 11 11 ASP A 142 LYS A 163 1 22 HELIX 12 12 MSE A 165 ALA A 169 5 5 HELIX 13 13 THR A 172 GLY A 190 1 19 HELIX 14 14 THR B 14 ARG B 33 1 20 HELIX 15 15 PRO B 34 ILE B 38 5 5 HELIX 16 16 THR B 39 GLY B 48 1 10 HELIX 17 17 SER B 50 GLY B 59 1 10 HELIX 18 18 SER B 60 VAL B 69 1 10 HELIX 19 19 PHE B 71 PHE B 79 1 9 HELIX 20 20 GLY B 85 ARG B 96 1 12 HELIX 21 21 PRO B 103 MSE B 111 1 9 HELIX 22 22 SER B 115 MSE B 130 1 16 HELIX 23 23 MSE B 130 GLU B 136 1 7 HELIX 24 24 ASP B 142 LYS B 163 1 22 HELIX 25 25 MSE B 165 ALA B 169 5 5 HELIX 26 26 THR B 172 GLY B 190 1 19 LINK C ARG A 89 N AMSE A 90 1555 1555 1.32 LINK C ARG A 89 N BMSE A 90 1555 1555 1.34 LINK C AMSE A 90 N VAL A 91 1555 1555 1.33 LINK C BMSE A 90 N VAL A 91 1555 1555 1.33 LINK C ASER A 92 N AMSE A 93 1555 1555 1.34 LINK C BSER A 92 N BMSE A 93 1555 1555 1.34 LINK C AMSE A 93 N PHE A 94 1555 1555 1.34 LINK C BMSE A 93 N PHE A 94 1555 1555 1.33 LINK C PHE A 110 N MSE A 111 1555 1555 1.33 LINK C MSE A 111 N ASER A 112 1555 1555 1.33 LINK C MSE A 111 N BSER A 112 1555 1555 1.34 LINK C GLN A 129 N MSE A 130 1555 1555 1.34 LINK C MSE A 130 N ILE A 131 1555 1555 1.34 LINK C VAL A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N SER A 152 1555 1555 1.33 LINK C SER A 152 N MSE A 153 1555 1555 1.33 LINK C MSE A 153 N LEU A 154 1555 1555 1.32 LINK C VAL A 159 N MSE A 160 1555 1555 1.33 LINK C MSE A 160 N ARG A 161 1555 1555 1.33 LINK C LYS A 163 N MSE A 164 1555 1555 1.31 LINK C MSE A 164 N AMSE A 165 1555 1555 1.33 LINK C MSE A 164 N BMSE A 165 1555 1555 1.32 LINK C AMSE A 165 N GLN A 166 1555 1555 1.32 LINK C BMSE A 165 N GLN A 166 1555 1555 1.33 LINK CE BMSE A 165 ND1BHIS A 168 1555 1555 1.81 LINK CE BMSE A 165 CE1BHIS A 168 1555 1555 1.73 LINK MG MG A 501 O HOH A 723 1555 1555 2.21 LINK MG MG A 501 O HOH A 720 1555 1555 2.15 LINK MG MG A 501 O HOH A 715 1555 1555 2.22 LINK MG MG A 501 O HOH A 729 1555 1555 1.98 LINK MG MG A 501 O LEU A 138 1555 1555 2.09 LINK MG MG A 501 O HOH A 708 1555 1555 1.81 LINK MG MG A 502 O1 EDO A 506 1555 1555 3.06 LINK MG MG A 502 OG SER A 105 1555 1555 3.07 LINK C ARG B 89 N MSE B 90 1555 1555 1.32 LINK C MSE B 90 N VAL B 91 1555 1555 1.33 LINK C BSER B 92 N BMSE B 93 1555 1555 1.33 LINK C ASER B 92 N AMSE B 93 1555 1555 1.33 LINK C BMSE B 93 N PHE B 94 1555 1555 1.33 LINK C AMSE B 93 N PHE B 94 1555 1555 1.33 LINK C PHE B 110 N MSE B 111 1555 1555 1.34 LINK C MSE B 111 N BSER B 112 1555 1555 1.33 LINK C MSE B 111 N ASER B 112 1555 1555 1.33 LINK C GLN B 129 N MSE B 130 1555 1555 1.33 LINK C MSE B 130 N ILE B 131 1555 1555 1.33 LINK C VAL B 150 N MSE B 151 1555 1555 1.34 LINK C MSE B 151 N SER B 152 1555 1555 1.36 LINK C SER B 152 N MSE B 153 1555 1555 1.34 LINK C MSE B 153 N LEU B 154 1555 1555 1.34 LINK C VAL B 159 N MSE B 160 1555 1555 1.34 LINK C MSE B 160 N ARG B 161 1555 1555 1.33 LINK C LYS B 163 N MSE B 164 1555 1555 1.33 LINK C MSE B 164 N MSE B 165 1555 1555 1.33 LINK C MSE B 165 N GLN B 166 1555 1555 1.32 LINK MG MG B 503 OG SER B 105 1555 1555 3.08 CISPEP 1 LYS A 102 PRO A 103 0 7.33 CISPEP 2 LYS B 102 PRO B 103 0 7.38 SITE 1 AC1 6 LEU A 138 HOH A 708 HOH A 715 HOH A 720 SITE 2 AC1 6 HOH A 723 HOH A 729 SITE 1 AC2 4 SER A 105 TYR A 126 THR A 155 EDO A 506 SITE 1 AC3 3 SER B 105 TYR B 126 EDO B 507 SITE 1 AC4 5 MSE B 93 PHE B 94 PRO B 103 ARG B 162 SITE 2 AC4 5 HOH B 546 SITE 1 AC5 5 MSE A 93 PHE A 94 PRO A 103 ARG A 162 SITE 2 AC5 5 HOH A 589 SITE 1 AC6 2 PRO A 103 MG A 502 SITE 1 AC7 1 MG B 503 CRYST1 42.259 72.130 133.875 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023664 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007470 0.00000