HEADER SURFACE ACTIVE PROTEIN 03-MAY-06 2GVM TITLE CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITH DETERGENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROPHOBIN-1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HYDROPHOBIN I, HFBI SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOCREA JECORINA; SOURCE 3 ORGANISM_TAXID: 51453 KEYWDS HYDROPHOBIN, AMPHIPHILE, SURFACTANT, HIGH SOLVENT CONTENT, SURFACE KEYWDS 2 ACTIVE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.HAKANPAA,J.ROUVINEN REVDAT 5 30-AUG-23 2GVM 1 REMARK LINK REVDAT 4 13-JUL-11 2GVM 1 VERSN REVDAT 3 24-FEB-09 2GVM 1 VERSN REVDAT 2 12-SEP-06 2GVM 1 JRNL REVDAT 1 15-AUG-06 2GVM 0 JRNL AUTH J.M.HAKANPAA,G.R.SZILVAY,H.KALJUNEN,M.MAKSIMAINEN,M.LINDER, JRNL AUTH 2 J.ROUVINEN JRNL TITL TWO CRYSTAL STRUCTURES OF TRICHODERMA REESEI HYDROPHOBIN JRNL TITL 2 HFBI--THE STRUCTURE OF A PROTEIN AMPHIPHILE WITH AND WITHOUT JRNL TITL 3 DETERGENT INTERACTION. JRNL REF PROTEIN SCI. V. 15 2129 2006 JRNL REFN ISSN 0961-8368 JRNL PMID 16882996 JRNL DOI 10.1110/PS.062326706 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 28109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1406 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 162 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.61100 REMARK 3 B22 (A**2) : 0.58200 REMARK 3 B33 (A**2) : 1.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.493 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.573 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.128 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.282 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 42.29 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:ACT.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 5 : CNS_TOPPAR:LDA.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : CNS_TOPPAR:PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CNS_TOPPAR:ACT.TOP REMARK 3 TOPOLOGY FILE 3 : CNS_TOPPAR:WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : CNS_TOPPAR:LDA.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000037602. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.84230 REMARK 200 MONOCHROMATOR : SI 111, HORIZONTALLY FOCUSSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28109 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.31800 REMARK 200 R SYM FOR SHELL (I) : 0.41900 REMARK 200 FOR SHELL : 4.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2FZ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M ZINC ACETATE, 0.1 HEPES (PH 7) REMARK 280 LDAO-DETERGENT AS AN ADDITIVE, CONCENTRATION IN THE DROP 2 MM, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.80000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.80000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.60000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.80000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.60000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.95000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.80000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 4 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 THE BIOLOGICAL ASSEMBLY IS AN OCTAMER FORMED IN THE REMARK 300 PRESENCE OF DETERGENT BY 8 HFBI-MOLECULES AND 20 REMARK 300 LDAO-MOLECULES. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -91.90000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 60.60000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -60.80000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 60.60000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -45.95000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 60.80000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -121.20000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 -91.90000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -60.60000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 SER B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 5 REMARK 465 SER C 1 REMARK 465 ASN C 2 REMARK 465 GLY C 3 REMARK 465 ASN C 4 REMARK 465 GLY C 5 REMARK 465 SER D 1 REMARK 465 ASN D 2 REMARK 465 GLY D 3 REMARK 465 ASN D 4 REMARK 465 GLY D 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 43 O HOH A 307 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C12 LDA B 308 C12 LDA B 308 3454 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 21 -175.77 -173.81 REMARK 500 LEU A 24 11.44 55.65 REMARK 500 LEU A 26 -0.09 -148.20 REMARK 500 LEU B 24 12.40 58.07 REMARK 500 LEU B 26 -18.38 -148.23 REMARK 500 ASP B 30 74.81 55.04 REMARK 500 ALA B 63 153.10 -48.34 REMARK 500 LEU C 24 8.16 59.66 REMARK 500 LEU C 26 9.18 -164.20 REMARK 500 LEU D 24 19.72 57.31 REMARK 500 LEU D 26 6.02 -164.94 REMARK 500 ASP D 30 66.94 60.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 43 OD1 REMARK 620 2 ASP A 43 OD2 57.0 REMARK 620 3 HOH A 305 O 106.0 111.4 REMARK 620 4 ASP D 40 OD1 93.8 81.0 160.1 REMARK 620 5 ASP D 40 OD2 131.8 82.1 112.5 52.1 REMARK 620 6 ASP D 43 OD2 82.7 135.1 97.2 82.9 118.7 REMARK 620 7 ASP D 43 OD1 133.9 162.1 80.9 83.8 81.1 51.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 40 OD1 REMARK 620 2 ASP B 43 OD1 77.4 REMARK 620 3 ASP B 43 OD2 117.4 50.6 REMARK 620 4 HOH B 328 O 116.8 78.5 87.5 REMARK 620 5 ASP C 43 OD1 150.6 130.6 83.7 82.3 REMARK 620 6 ASP C 43 OD2 97.0 161.1 120.4 119.6 53.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA C 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FZ6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITHOUT DETERGENT REMARK 900 RELATED ID: 1R2M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBII REMARK 900 RELATED ID: 2B97 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYDROPHOBIN HFBII AT ULTRA-HIGH RESOLUTION DBREF 2GVM A 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM B 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM C 1 75 UNP P52754 HYP1_TRIRE 23 97 DBREF 2GVM D 1 75 UNP P52754 HYP1_TRIRE 23 97 SEQRES 1 A 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 A 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 A 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 A 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 A 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 A 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 B 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 B 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 B 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 B 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 B 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 B 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 C 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 C 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 C 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 C 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 C 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 C 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA SEQRES 1 D 75 SER ASN GLY ASN GLY ASN VAL CYS PRO PRO GLY LEU PHE SEQRES 2 D 75 SER ASN PRO GLN CYS CYS ALA THR GLN VAL LEU GLY LEU SEQRES 3 D 75 ILE GLY LEU ASP CYS LYS VAL PRO SER GLN ASN VAL TYR SEQRES 4 D 75 ASP GLY THR ASP PHE ARG ASN VAL CYS ALA LYS THR GLY SEQRES 5 D 75 ALA GLN PRO LEU CYS CYS VAL ALA PRO VAL ALA GLY GLN SEQRES 6 D 75 ALA LEU LEU CYS GLN THR ALA VAL GLY ALA HET ZN A 201 1 HET LDA A 303 16 HET LDA A 304 16 HET ZN B 202 1 HET LDA B 302 16 HET LDA B 305 16 HET LDA B 306 16 HET LDA B 307 16 HET LDA B 308 16 HET LDA B 309 16 HET LDA C 301 16 HET LDA C 310 16 HETNAM ZN ZINC ION HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE FORMUL 5 ZN 2(ZN 2+) FORMUL 6 LDA 10(C14 H31 N O) FORMUL 17 HOH *118(H2 O) HELIX 1 1 ASP A 40 LYS A 50 1 11 HELIX 2 2 ASP B 40 LYS B 50 1 11 HELIX 3 3 ASP C 40 LYS C 50 1 11 HELIX 4 4 ASP D 40 LYS D 50 1 11 SHEET 1 A 5 ASN A 15 VAL A 23 0 SHEET 2 A 5 ILE A 27 LYS A 32 -1 O LYS A 32 N CYS A 18 SHEET 3 A 5 GLY A 64 THR A 71 -1 O LEU A 67 N GLY A 28 SHEET 4 A 5 GLN A 54 CYS A 58 -1 N CYS A 57 O GLN A 70 SHEET 5 A 5 ASN A 15 VAL A 23 -1 N ASN A 15 O CYS A 58 SHEET 1 B 5 ASN B 15 VAL B 23 0 SHEET 2 B 5 ILE B 27 LYS B 32 -1 O LYS B 32 N CYS B 18 SHEET 3 B 5 GLY B 64 THR B 71 -1 O GLY B 64 N CYS B 31 SHEET 4 B 5 GLN B 54 CYS B 58 -1 N CYS B 57 O GLN B 70 SHEET 5 B 5 ASN B 15 VAL B 23 -1 N ASN B 15 O CYS B 58 SHEET 1 C 5 ASN C 15 VAL C 23 0 SHEET 2 C 5 ILE C 27 LYS C 32 -1 O LYS C 32 N CYS C 18 SHEET 3 C 5 GLY C 64 THR C 71 -1 O LEU C 67 N GLY C 28 SHEET 4 C 5 GLN C 54 CYS C 58 -1 N CYS C 57 O GLN C 70 SHEET 5 C 5 ASN C 15 VAL C 23 -1 N CYS C 19 O GLN C 54 SHEET 1 D 5 ASN D 15 VAL D 23 0 SHEET 2 D 5 ILE D 27 LYS D 32 -1 O LYS D 32 N CYS D 18 SHEET 3 D 5 GLY D 64 THR D 71 -1 O GLY D 64 N CYS D 31 SHEET 4 D 5 GLN D 54 CYS D 58 -1 N CYS D 57 O GLN D 70 SHEET 5 D 5 ASN D 15 VAL D 23 -1 N CYS D 19 O GLN D 54 SSBOND 1 CYS A 8 CYS A 57 1555 1555 2.04 SSBOND 2 CYS A 18 CYS A 48 1555 1555 2.05 SSBOND 3 CYS A 19 CYS A 31 1555 1555 2.04 SSBOND 4 CYS A 58 CYS A 69 1555 1555 2.04 SSBOND 5 CYS B 8 CYS B 57 1555 1555 2.04 SSBOND 6 CYS B 18 CYS B 48 1555 1555 2.04 SSBOND 7 CYS B 19 CYS B 31 1555 1555 2.04 SSBOND 8 CYS B 58 CYS B 69 1555 1555 2.04 SSBOND 9 CYS C 8 CYS C 57 1555 1555 2.05 SSBOND 10 CYS C 18 CYS C 48 1555 1555 2.05 SSBOND 11 CYS C 19 CYS C 31 1555 1555 2.04 SSBOND 12 CYS C 58 CYS C 69 1555 1555 2.04 SSBOND 13 CYS D 8 CYS D 57 1555 1555 2.04 SSBOND 14 CYS D 18 CYS D 48 1555 1555 2.04 SSBOND 15 CYS D 19 CYS D 31 1555 1555 2.04 SSBOND 16 CYS D 58 CYS D 69 1555 1555 2.04 LINK OD1 ASP A 43 ZN ZN A 201 1555 1555 1.98 LINK OD2 ASP A 43 ZN ZN A 201 1555 1555 2.48 LINK ZN ZN A 201 O HOH A 305 1555 1555 2.25 LINK ZN ZN A 201 OD1 ASP D 40 1555 7444 2.74 LINK ZN ZN A 201 OD2 ASP D 40 1555 7444 2.12 LINK ZN ZN A 201 OD2 ASP D 43 1555 7444 2.23 LINK ZN ZN A 201 OD1 ASP D 43 1555 7444 2.75 LINK OD1 ASP B 40 ZN ZN B 202 1555 1555 2.17 LINK OD1 ASP B 43 ZN ZN B 202 1555 1555 2.77 LINK OD2 ASP B 43 ZN ZN B 202 1555 1555 2.24 LINK ZN ZN B 202 O HOH B 328 1555 1555 2.10 LINK ZN ZN B 202 OD1 ASP C 43 1555 6454 2.62 LINK ZN ZN B 202 OD2 ASP C 43 1555 6454 2.22 SITE 1 AC1 4 ASP A 43 HOH A 305 ASP D 40 ASP D 43 SITE 1 AC2 5 ASP B 40 ASP B 43 HOH B 328 GLN C 36 SITE 2 AC2 5 ASP C 43 SITE 1 AC3 3 LEU B 12 PHE B 13 LDA C 310 SITE 1 AC4 2 ILE A 27 LDA C 310 SITE 1 AC5 2 LDA B 305 LDA B 306 SITE 1 AC6 2 LDA A 304 LDA B 308 SITE 1 AC7 1 LDA A 304 SITE 1 AC8 6 THR B 21 GLN B 22 VAL B 23 LEU B 29 SITE 2 AC8 6 LDA B 309 LEU C 24 SITE 1 AC9 5 ALA A 66 ASP B 30 LDA B 305 HOH B 324 SITE 2 AC9 5 VAL C 23 SITE 1 BC1 1 LDA B 307 SITE 1 BC2 4 LDA A 303 LDA B 302 GLN C 65 VAL D 23 CRYST1 91.900 121.600 121.200 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010881 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008251 0.00000