data_2H49 # _entry.id 2H49 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2H49 pdb_00002h49 10.2210/pdb2h49/pdb RCSB RCSB037910 ? ? WWPDB D_1000037910 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2H49 _pdbx_database_status.recvd_initial_deposition_date 2006-05-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Shankar, N.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'The NMR structure of an internal loop from 23S ribosomal RNA differs from its structure in crystals of 50s ribosomal subunits.' _citation.journal_abbrev Biochemistry _citation.journal_volume 45 _citation.page_first 11776 _citation.page_last 11789 _citation.year 2006 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17002278 _citation.pdbx_database_id_DOI 10.1021/bi0605787 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shankar, N.' 1 ? primary 'Kennedy, S.D.' 2 ? primary 'Chen, G.' 3 ? primary 'Krugh, T.R.' 4 ? primary 'Turner, D.H.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*GP*CP*UP*AP*AP*GP*AP*C)-3'" 2894.807 1 ? ? ? ? 2 polymer syn "5'-R(*GP*UP*CP*GP*AP*AP*GP*CP*C)-3'" 2870.783 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGCUAAGAC GGCUAAGAC A ? 2 polyribonucleotide no no GUCGAAGCC GUCGAAGCC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 U n 1 5 A n 1 6 A n 1 7 G n 1 8 A n 1 9 C n 2 1 G n 2 2 U n 2 3 C n 2 4 G n 2 5 A n 2 6 A n 2 7 G n 2 8 C n 2 9 C n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Synthesized on a DNA/RNA synthesizer' 2 1 sample ? ? ? ? ? 'Synthesized on a DNA/RNA synthesizer' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 2H49 2H49 ? ? ? 2 2 PDB 2H49 2H49 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H49 A 1 ? 9 ? 2H49 1 ? 9 ? 1 9 2 2 2H49 B 1 ? 9 ? 2H49 10 ? 18 ? 10 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 ;2mM TOTAL DUPLEX CONCENTRATION; 80MM NACL, 10MM SODIUM PHOSPHATE, 0.5MM NA2EDTA, 90% H2O, 10% D2O ; '90% H2O/10% D2O' 2 ;2mM TOTAL DUPLEX CONCENTRATION; 80MM NACL, 10MM SODIUM PHOSPHATE, 0.5MM NA2EDTA, 100% D2O ; '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 500 ? 2 INOVA Varian 600 ? # _pdbx_nmr_refine.entry_id 2H49 _pdbx_nmr_refine.method 'DISTANCE GEOMETRY, SIMULATED ANNEALING, RESTRAINED MOLECULAR DYNAMICS' _pdbx_nmr_refine.details 'SILICON GRAPHICS OCTANE COMPUTER,AMBER 95 FORCE FIELD' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2H49 _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations,structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2H49 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal 'data analysis' Sparky 3.110 'T. D. Goddard and D. G. Kneller' 1 processing NMRDraw 2.3 'F. Delaglio' 2 refinement Discover 98 'Molecular Simulations Inc.' 3 # _exptl.entry_id 2H49 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 2H49 _struct.title ;The NMR Structure of an Internal Loop from 23S Ribosomal RNA of Deinococcus radiodurans Differs from the Structure in the Crystal of the Ribosomal Subunit ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H49 _struct_keywords.pdbx_keywords RNA _struct_keywords.text ;RNA INTERNAL LOOP 5'cUAAg3'/3'gAAGc5', COMPARISON BETWEEN CRYSTAL STRUCTURE AND NMR STRUCTURE, THERMODYNAMICS OF INTERNAL LOOP, RNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 1 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 1 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 1 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B C 8 N3 ? ? A G 2 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B C 8 O2 ? ? A G 2 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B C 8 N4 ? ? A G 2 B C 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 7 N1 ? ? A C 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 7 O6 ? ? A C 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 7 N2 ? ? A C 3 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O2 ? ? ? 1_555 B A 6 N6 ? ? A U 4 B A 15 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog11 hydrog ? ? A A 5 N3 ? ? ? 1_555 B A 5 N6 ? ? A A 5 B A 14 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog12 hydrog ? ? A A 6 N6 ? ? ? 1_555 B G 4 N3 ? ? A A 6 B G 13 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? A A 6 N7 ? ? ? 1_555 B G 4 N2 ? ? A A 6 B G 13 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 3 N3 ? ? A G 7 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 3 O2 ? ? A G 7 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 3 N4 ? ? A G 7 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 8 N1 ? ? ? 1_555 B U 2 N3 ? ? A A 8 B U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 8 N6 ? ? ? 1_555 B U 2 O4 ? ? A A 8 B U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 9 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2H49 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2H49 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 U 4 4 4 U U A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 C 9 9 9 C C A . n B 2 1 G 1 10 10 G G B . n B 2 2 U 2 11 11 U U B . n B 2 3 C 3 12 12 C C B . n B 2 4 G 4 13 13 G G B . n B 2 5 A 5 14 14 A A B . n B 2 6 A 6 15 15 A A B . n B 2 7 G 7 16 16 G G B . n B 2 8 C 8 17 17 C C B . n B 2 9 C 9 18 18 C C B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-21 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.46 108.50 4.96 0.70 N 2 1 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.31 108.50 4.81 0.70 N 3 1 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.37 108.50 4.87 0.70 N 4 1 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.00 108.50 5.50 0.70 N 5 1 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.19 108.50 4.69 0.70 N 6 2 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.54 108.50 5.04 0.70 N 7 2 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.56 108.50 5.06 0.70 N 8 2 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.35 108.50 4.85 0.70 N 9 2 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.02 108.50 5.52 0.70 N 10 2 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.12 108.50 4.62 0.70 N 11 3 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.65 108.50 5.15 0.70 N 12 3 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.38 108.50 4.88 0.70 N 13 3 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.49 108.50 4.99 0.70 N 14 3 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.03 108.50 5.53 0.70 N 15 3 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.18 108.50 4.68 0.70 N 16 4 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.71 108.50 5.21 0.70 N 17 4 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.27 108.50 4.77 0.70 N 18 4 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.15 108.50 4.65 0.70 N 19 4 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.51 108.50 5.01 0.70 N 20 4 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.98 108.50 5.48 0.70 N 21 4 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.31 108.50 4.81 0.70 N 22 5 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.46 108.50 4.96 0.70 N 23 5 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.24 108.50 4.74 0.70 N 24 5 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.15 108.50 4.65 0.70 N 25 5 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.41 108.50 4.91 0.70 N 26 5 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.91 108.50 5.41 0.70 N 27 5 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.13 108.50 4.63 0.70 N 28 6 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.92 108.50 4.42 0.70 N 29 6 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 112.79 108.50 4.29 0.70 N 30 6 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.60 108.50 5.10 0.70 N 31 6 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.88 108.50 5.38 0.70 N 32 6 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.11 108.50 4.61 0.70 N 33 7 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.41 108.50 4.91 0.70 N 34 7 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 114.55 108.50 6.05 0.70 N 35 7 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.21 108.50 4.71 0.70 N 36 7 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.39 108.50 4.89 0.70 N 37 7 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.71 108.50 5.21 0.70 N 38 7 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.49 108.50 4.99 0.70 N 39 7 "O4'" B C 18 ? ? "C1'" B C 18 ? ? N1 B C 18 ? ? 113.63 108.50 5.13 0.70 N 40 8 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.37 108.50 4.87 0.70 N 41 8 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.41 108.50 4.91 0.70 N 42 8 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.13 108.50 4.63 0.70 N 43 8 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.46 108.50 4.96 0.70 N 44 8 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.95 108.50 5.45 0.70 N 45 8 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.44 108.50 4.94 0.70 N 46 8 "O4'" B C 18 ? ? "C1'" B C 18 ? ? N1 B C 18 ? ? 113.42 108.50 4.92 0.70 N 47 9 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.52 108.50 5.02 0.70 N 48 9 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.05 108.50 4.55 0.70 N 49 9 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.15 108.50 4.65 0.70 N 50 9 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.40 108.50 4.90 0.70 N 51 9 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.90 108.50 5.40 0.70 N 52 9 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.18 108.50 4.68 0.70 N 53 10 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.65 108.50 5.15 0.70 N 54 10 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.04 108.50 4.54 0.70 N 55 10 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.25 108.50 4.75 0.70 N 56 10 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.78 108.50 5.28 0.70 N 57 10 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.56 108.50 5.06 0.70 N 58 10 "O4'" B C 18 ? ? "C1'" B C 18 ? ? N1 B C 18 ? ? 113.59 108.50 5.09 0.70 N 59 11 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.52 108.50 5.02 0.70 N 60 11 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.27 108.50 4.77 0.70 N 61 11 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.31 108.50 4.81 0.70 N 62 11 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.95 108.50 5.45 0.70 N 63 11 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.11 108.50 4.61 0.70 N 64 12 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.62 108.50 5.12 0.70 N 65 12 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 112.79 108.50 4.29 0.70 N 66 12 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.38 108.50 4.88 0.70 N 67 12 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.93 108.50 5.43 0.70 N 68 12 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.13 108.50 4.63 0.70 N 69 13 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.44 108.50 4.94 0.70 N 70 13 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.15 108.50 4.65 0.70 N 71 13 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.33 108.50 4.83 0.70 N 72 13 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.51 108.50 6.01 0.70 N 73 13 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.06 108.50 4.56 0.70 N 74 14 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.61 108.50 5.11 0.70 N 75 14 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.88 108.50 5.38 0.70 N 76 14 "O4'" A C 9 ? ? "C1'" A C 9 ? ? N1 A C 9 ? ? 113.16 108.50 4.66 0.70 N 77 14 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.34 108.50 4.84 0.70 N 78 14 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.73 108.50 5.23 0.70 N 79 14 "C3'" B G 13 ? ? "O3'" B G 13 ? ? P B A 14 ? ? 127.34 119.70 7.64 1.20 Y 80 14 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.13 108.50 4.63 0.70 N 81 15 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.46 108.50 4.96 0.70 N 82 15 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.18 108.50 4.68 0.70 N 83 15 "C3'" A A 5 ? ? "O3'" A A 5 ? ? P A A 6 ? ? 127.15 119.70 7.45 1.20 Y 84 15 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.41 108.50 4.91 0.70 N 85 15 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.03 108.50 5.53 0.70 N 86 15 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.53 108.50 5.03 0.70 N 87 15 "O4'" B C 18 ? ? "C1'" B C 18 ? ? N1 B C 18 ? ? 113.61 108.50 5.11 0.70 N 88 16 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.53 108.50 5.03 0.70 N 89 16 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.40 108.50 4.90 0.70 N 90 16 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.38 108.50 4.88 0.70 N 91 16 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.88 108.50 5.38 0.70 N 92 16 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.26 108.50 4.76 0.70 N 93 17 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 112.96 108.50 4.46 0.70 N 94 17 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.13 108.50 4.63 0.70 N 95 17 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.52 108.50 5.02 0.70 N 96 17 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.92 108.50 5.42 0.70 N 97 17 "C3'" B G 13 ? ? "O3'" B G 13 ? ? P B A 14 ? ? 127.35 119.70 7.65 1.20 Y 98 17 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.10 108.50 4.60 0.70 N 99 18 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.61 108.50 5.11 0.70 N 100 18 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.22 108.50 4.72 0.70 N 101 18 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.40 108.50 4.90 0.70 N 102 18 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 114.03 108.50 5.53 0.70 N 103 18 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.61 108.50 5.11 0.70 N 104 19 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.49 108.50 4.99 0.70 N 105 19 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.29 108.50 4.79 0.70 N 106 19 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.27 108.50 4.77 0.70 N 107 19 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.84 108.50 5.34 0.70 N 108 19 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.13 108.50 4.63 0.70 N 109 20 "O4'" A C 3 ? ? "C1'" A C 3 ? ? N1 A C 3 ? ? 113.54 108.50 5.04 0.70 N 110 20 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 113.02 108.50 4.52 0.70 N 111 20 "C3'" A A 5 ? ? "O3'" A A 5 ? ? P A A 6 ? ? 127.20 119.70 7.50 1.20 Y 112 20 "O4'" B U 11 ? ? "C1'" B U 11 ? ? N1 B U 11 ? ? 113.21 108.50 4.71 0.70 N 113 20 "O4'" B C 12 ? ? "C1'" B C 12 ? ? N1 B C 12 ? ? 113.84 108.50 5.34 0.70 N 114 20 "O4'" B C 17 ? ? "C1'" B C 17 ? ? N1 B C 17 ? ? 113.05 108.50 4.55 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 A A 8 ? ? 0.070 'SIDE CHAIN' 2 1 G B 10 ? ? 0.056 'SIDE CHAIN' 3 2 A A 8 ? ? 0.068 'SIDE CHAIN' 4 2 G B 10 ? ? 0.058 'SIDE CHAIN' 5 3 A A 8 ? ? 0.074 'SIDE CHAIN' 6 3 G B 10 ? ? 0.057 'SIDE CHAIN' 7 4 A A 8 ? ? 0.084 'SIDE CHAIN' 8 4 G B 10 ? ? 0.060 'SIDE CHAIN' 9 5 A A 8 ? ? 0.078 'SIDE CHAIN' 10 5 G B 10 ? ? 0.061 'SIDE CHAIN' 11 6 A A 8 ? ? 0.054 'SIDE CHAIN' 12 7 A A 8 ? ? 0.079 'SIDE CHAIN' 13 7 G B 10 ? ? 0.056 'SIDE CHAIN' 14 7 C B 17 ? ? 0.064 'SIDE CHAIN' 15 8 A A 8 ? ? 0.082 'SIDE CHAIN' 16 8 G B 10 ? ? 0.060 'SIDE CHAIN' 17 8 C B 17 ? ? 0.069 'SIDE CHAIN' 18 9 A A 5 ? ? 0.055 'SIDE CHAIN' 19 9 A A 8 ? ? 0.076 'SIDE CHAIN' 20 9 G B 10 ? ? 0.061 'SIDE CHAIN' 21 10 A A 5 ? ? 0.056 'SIDE CHAIN' 22 10 A A 8 ? ? 0.062 'SIDE CHAIN' 23 10 G B 10 ? ? 0.059 'SIDE CHAIN' 24 10 C B 17 ? ? 0.069 'SIDE CHAIN' 25 11 A A 8 ? ? 0.061 'SIDE CHAIN' 26 11 G B 10 ? ? 0.056 'SIDE CHAIN' 27 12 A A 8 ? ? 0.064 'SIDE CHAIN' 28 12 G B 10 ? ? 0.057 'SIDE CHAIN' 29 13 A A 8 ? ? 0.063 'SIDE CHAIN' 30 13 G B 10 ? ? 0.058 'SIDE CHAIN' 31 14 A A 8 ? ? 0.075 'SIDE CHAIN' 32 14 G B 10 ? ? 0.060 'SIDE CHAIN' 33 14 A B 15 ? ? 0.056 'SIDE CHAIN' 34 15 A A 8 ? ? 0.070 'SIDE CHAIN' 35 15 G B 10 ? ? 0.057 'SIDE CHAIN' 36 16 A A 8 ? ? 0.068 'SIDE CHAIN' 37 16 G B 10 ? ? 0.058 'SIDE CHAIN' 38 17 A A 8 ? ? 0.057 'SIDE CHAIN' 39 18 A A 8 ? ? 0.076 'SIDE CHAIN' 40 18 G B 10 ? ? 0.058 'SIDE CHAIN' 41 19 A A 8 ? ? 0.064 'SIDE CHAIN' 42 19 G B 10 ? ? 0.059 'SIDE CHAIN' 43 20 A A 8 ? ? 0.061 'SIDE CHAIN' 44 20 G B 10 ? ? 0.059 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2H49 'double helix' 2H49 'a-form double helix' 2H49 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 9 1_555 -0.592 -0.144 -0.128 -1.075 -3.793 -0.659 1 A_G1:C18_B A 1 ? B 18 ? 19 1 1 A G 2 1_555 B C 8 1_555 -0.414 -0.070 -0.182 -4.276 -12.869 1.486 2 A_G2:C17_B A 2 ? B 17 ? 19 1 1 A C 3 1_555 B G 7 1_555 0.345 -0.071 -0.067 -5.460 -10.066 -1.006 3 A_C3:G16_B A 3 ? B 16 ? 19 1 1 A U 4 1_555 B A 6 1_555 4.672 -0.543 -0.071 -8.359 -5.238 7.063 4 A_U4:A15_B A 4 ? B 15 ? ? ? 1 A A 5 1_555 B A 5 1_555 6.481 -4.278 -0.403 1.799 -1.789 -10.599 5 A_A5:A14_B A 5 ? B 14 ? ? 6 1 A A 6 1_555 B G 4 1_555 -6.789 -4.211 -0.089 4.935 -9.425 -2.569 6 A_A6:G13_B A 6 ? B 13 ? 11 9 1 A G 7 1_555 B C 3 1_555 -0.794 -0.212 0.025 2.658 -12.921 0.415 7 A_G7:C12_B A 7 ? B 12 ? 19 1 1 A A 8 1_555 B U 2 1_555 -0.158 0.011 0.193 -0.376 -12.741 2.387 8 A_A8:U11_B A 8 ? B 11 ? 20 1 1 A C 9 1_555 B G 1 1_555 0.643 -0.171 0.242 -3.697 -13.657 -0.466 9 A_C9:G10_B A 9 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 9 1_555 A G 2 1_555 B C 8 1_555 0.274 -1.837 3.334 0.363 6.655 32.727 -4.264 -0.419 2.918 11.660 -0.636 33.380 1 AA_G1G2:C17C18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A G 2 1_555 B C 8 1_555 A C 3 1_555 B G 7 1_555 -0.086 -1.897 3.263 -0.241 2.604 35.618 -3.462 0.106 3.122 4.251 0.393 35.711 2 AA_G2C3:G16C17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A C 3 1_555 B G 7 1_555 A U 4 1_555 B A 6 1_555 0.553 -1.388 3.380 3.047 2.425 46.603 -1.957 -0.436 3.336 3.059 -3.843 46.756 3 AA_C3U4:A15G16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A U 4 1_555 B A 6 1_555 A A 5 1_555 B A 5 1_555 -0.778 -1.428 3.041 6.485 -0.194 44.036 -1.870 1.575 2.910 -0.257 -8.593 44.488 4 AA_U4A5:A14A15_BB A 4 ? B 15 ? A 5 ? B 14 ? 1 A A 5 1_555 B A 5 1_555 A A 6 1_555 B G 4 1_555 0.388 -2.780 3.074 -2.894 7.782 -24.749 3.872 0.010 3.778 -17.538 -6.523 -26.084 5 AA_A5A6:G13A14_BB A 5 ? B 14 ? A 6 ? B 13 ? 1 A A 6 1_555 B G 4 1_555 A G 7 1_555 B C 3 1_555 0.355 -0.727 3.491 -4.166 2.848 63.042 -0.827 -0.534 3.432 2.719 3.978 63.223 6 AA_A6G7:C12G13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A G 7 1_555 B C 3 1_555 A A 8 1_555 B U 2 1_555 0.050 -1.884 3.220 -1.557 5.465 34.056 -3.972 -0.311 2.887 9.251 2.635 34.513 7 AA_G7A8:U11C12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A A 8 1_555 B U 2 1_555 A C 9 1_555 B G 1 1_555 -0.164 -1.241 3.266 0.638 3.894 39.204 -2.293 0.318 3.130 5.785 -0.948 39.395 8 AA_A8C9:G10U11_BB A 8 ? B 11 ? A 9 ? B 10 ? #