HEADER VIRAL PROTEIN 06-JUN-06 2H85 TITLE CRYSTAL STRUCTURE OF NSP 15 FROM SARS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ORF1AB POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 227859; SOURCE 4 STRAIN: FRANKFURT-1; SOURCE 5 GENE: NSP15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: GATEWAY KEYWDS ENDORIBONUCLEASE, SARS, RNA, NSP, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.RICAGNO,M.P.EGLOFF,R.ULFERTS,B.COUTARD,D.NURIZZO,V.CAMPANACCI, AUTHOR 2 C.CAMBILLAU,J.ZIEBUHR,B.CANARD REVDAT 6 14-FEB-24 2H85 1 REMARK REVDAT 5 20-OCT-21 2H85 1 SEQADV REVDAT 4 13-JUL-11 2H85 1 VERSN REVDAT 3 24-FEB-09 2H85 1 VERSN REVDAT 2 22-AUG-06 2H85 1 JRNL REVDAT 1 15-AUG-06 2H85 0 JRNL AUTH S.RICAGNO,M.P.EGLOFF,R.ULFERTS,B.COUTARD,D.NURIZZO, JRNL AUTH 2 V.CAMPANACCI,C.CAMBILLAU,J.ZIEBUHR,B.CANARD JRNL TITL CRYSTAL STRUCTURE AND MECHANISTIC DETERMINANTS OF SARS JRNL TITL 2 CORONAVIRUS NONSTRUCTURAL PROTEIN 15 DEFINE AN JRNL TITL 3 ENDORIBONUCLEASE FAMILY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 11892 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16882730 JRNL DOI 10.1073/PNAS.0601708103 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 23625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1266 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1699 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2714 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 88 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.261 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.219 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.679 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2769 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2503 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3753 ; 1.301 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5851 ; 0.772 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 6.135 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;38.372 ;25.285 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 483 ;18.392 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;22.562 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 429 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3072 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 534 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 550 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2552 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1388 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1637 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 102 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.114 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.229 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2197 ; 0.712 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 708 ; 0.082 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2798 ; 0.826 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1212 ; 1.330 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 955 ; 2.066 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2H85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97938 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL-CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : MOSFLM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24505 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 52.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.16900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5-20% PEG 10000, 0.2M IMIDAZOLE MALATE REMARK 280 PH 9.0-10.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.29200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 83.29200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.29200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 83.29200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 83.29200 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 83.29200 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 83.29200 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 83.29200 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 83.29200 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 83.29200 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 83.29200 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 83.29200 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 83.29200 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 41.64600 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 124.93800 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 41.64600 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 41.64600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 41.64600 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 124.93800 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 41.64600 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 124.93800 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 41.64600 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 124.93800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 41.64600 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 124.93800 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 124.93800 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 41.64600 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 124.93800 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 41.64600 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 41.64600 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 41.64600 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 124.93800 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 41.64600 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 41.64600 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 124.93800 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 124.93800 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 124.93800 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 41.64600 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 124.93800 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 41.64600 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 124.93800 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 41.64600 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 41.64600 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 41.64600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 18010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 84530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 208.23000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 208.23000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 208.23000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 208.23000 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 208.23000 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 208.23000 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 208.23000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 208.23000 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 208.23000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 14 O HOH A 433 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 61 132.74 -27.42 REMARK 500 VAL A 101 -48.16 -131.77 REMARK 500 TYR A 324 -2.50 70.63 REMARK 500 REMARK 500 REMARK: NULL DBREF 2H85 A 0 345 UNP Q6VA80 Q6VA80_CVHSA 6429 6774 SEQADV 2H85 HIS A -1 UNP Q6VA80 CLONING ARTIFACT SEQADV 2H85 GLY A 291 UNP Q6VA80 VAL 6720 ENGINEERED MUTATION SEQADV 2H85 GLY A 300 UNP Q6VA80 ASP 6729 ENGINEERED MUTATION SEQRES 1 A 347 HIS GLN SER LEU GLU ASN VAL ALA TYR ASN VAL VAL ASN SEQRES 2 A 347 LYS GLY HIS PHE ASP GLY HIS ALA GLY GLU ALA PRO VAL SEQRES 3 A 347 SER ILE ILE ASN ASN ALA VAL TYR THR LYS VAL ASP GLY SEQRES 4 A 347 ILE ASP VAL GLU ILE PHE GLU ASN LYS THR THR LEU PRO SEQRES 5 A 347 VAL ASN VAL ALA PHE GLU LEU TRP ALA LYS ARG ASN ILE SEQRES 6 A 347 LYS PRO VAL PRO GLU ILE LYS ILE LEU ASN ASN LEU GLY SEQRES 7 A 347 VAL ASP ILE ALA ALA ASN THR VAL ILE TRP ASP TYR LYS SEQRES 8 A 347 ARG GLU ALA PRO ALA HIS VAL SER THR ILE GLY VAL CYS SEQRES 9 A 347 THR MET THR ASP ILE ALA LYS LYS PRO THR GLU SER ALA SEQRES 10 A 347 CYS SER SER LEU THR VAL LEU PHE ASP GLY ARG VAL GLU SEQRES 11 A 347 GLY GLN VAL ASP LEU PHE ARG ASN ALA ARG ASN GLY VAL SEQRES 12 A 347 LEU ILE THR GLU GLY SER VAL LYS GLY LEU THR PRO SER SEQRES 13 A 347 LYS GLY PRO ALA GLN ALA SER VAL ASN GLY VAL THR LEU SEQRES 14 A 347 ILE GLY GLU SER VAL LYS THR GLN PHE ASN TYR PHE LYS SEQRES 15 A 347 LYS VAL ASP GLY ILE ILE GLN GLN LEU PRO GLU THR TYR SEQRES 16 A 347 PHE THR GLN SER ARG ASP LEU GLU ASP PHE LYS PRO ARG SEQRES 17 A 347 SER GLN MET GLU THR ASP PHE LEU GLU LEU ALA MET ASP SEQRES 18 A 347 GLU PHE ILE GLN ARG TYR LYS LEU GLU GLY TYR ALA PHE SEQRES 19 A 347 GLU HIS ILE VAL TYR GLY ASP PHE SER HIS GLY GLN LEU SEQRES 20 A 347 GLY GLY LEU HIS LEU MET ILE GLY LEU ALA LYS ARG SER SEQRES 21 A 347 GLN ASP SER PRO LEU LYS LEU GLU ASP PHE ILE PRO MET SEQRES 22 A 347 ASP SER THR VAL LYS ASN TYR PHE ILE THR ASP ALA GLN SEQRES 23 A 347 THR GLY SER SER LYS CYS GLY CYS SER VAL ILE ASP LEU SEQRES 24 A 347 LEU LEU GLY ASP PHE VAL GLU ILE ILE LYS SER GLN ASP SEQRES 25 A 347 LEU SER VAL ILE SER LYS VAL VAL LYS VAL THR ILE ASP SEQRES 26 A 347 TYR ALA GLU ILE SER PHE MET LEU TRP CYS LYS ASP GLY SEQRES 27 A 347 HIS VAL GLU THR PHE TYR PRO LYS LEU FORMUL 2 HOH *88(H2 O) HELIX 1 1 SER A 1 GLY A 13 1 13 HELIX 2 2 PRO A 50 LYS A 60 1 11 HELIX 3 3 GLU A 68 LEU A 75 1 8 HELIX 4 4 GLU A 113 SER A 117 5 5 HELIX 5 5 GLY A 129 ALA A 137 1 9 HELIX 6 6 ASP A 199 PHE A 203 5 5 HELIX 7 7 SER A 207 LEU A 216 1 10 HELIX 8 8 ALA A 217 TYR A 225 1 9 HELIX 9 9 ALA A 231 VAL A 236 1 6 HELIX 10 10 LEU A 250 SER A 261 1 12 HELIX 11 11 LEU A 298 SER A 308 1 11 SHEET 1 A 3 VAL A 24 ILE A 27 0 SHEET 2 A 3 ALA A 30 VAL A 35 -1 O TYR A 32 N SER A 25 SHEET 3 A 3 ILE A 38 GLU A 44 -1 O ILE A 38 N VAL A 35 SHEET 1 B 5 ILE A 79 ALA A 80 0 SHEET 2 B 5 VAL A 121 ASP A 124 1 O LEU A 122 N ILE A 79 SHEET 3 B 5 GLY A 140 THR A 144 1 O VAL A 141 N PHE A 123 SHEET 4 B 5 ASN A 177 VAL A 182 -1 O PHE A 179 N LEU A 142 SHEET 5 B 5 SER A 154 LYS A 155 -1 N SER A 154 O TYR A 178 SHEET 1 C 5 ILE A 79 ALA A 80 0 SHEET 2 C 5 VAL A 121 ASP A 124 1 O LEU A 122 N ILE A 79 SHEET 3 C 5 GLY A 140 THR A 144 1 O VAL A 141 N PHE A 123 SHEET 4 C 5 ASN A 177 VAL A 182 -1 O PHE A 179 N LEU A 142 SHEET 5 C 5 ILE A 185 ILE A 186 -1 O ILE A 185 N VAL A 182 SHEET 1 D 2 TRP A 86 ASP A 87 0 SHEET 2 D 2 ALA A 92 PRO A 93 -1 O ALA A 92 N ASP A 87 SHEET 1 E 2 THR A 98 ILE A 99 0 SHEET 2 E 2 ASP A 106 ALA A 108 1 O ILE A 107 N THR A 98 SHEET 1 F 2 ALA A 160 VAL A 162 0 SHEET 2 F 2 VAL A 165 LEU A 167 -1 O VAL A 165 N VAL A 162 SHEET 1 G 3 LEU A 263 ASP A 267 0 SHEET 2 G 3 LYS A 276 ASP A 282 -1 O PHE A 279 N GLU A 266 SHEET 3 G 3 SER A 288 VAL A 294 -1 O LYS A 289 N ILE A 280 SHEET 1 H 3 SER A 315 ILE A 322 0 SHEET 2 H 3 ALA A 325 LYS A 334 -1 O ILE A 327 N VAL A 320 SHEET 3 H 3 HIS A 337 PRO A 343 -1 O GLU A 339 N TRP A 332 CRYST1 166.584 166.584 166.584 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006003 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006003 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006003 0.00000