HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-JUN-06 2H9Z TITLE SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN, HP0495 FROM HELICOBACTER TITLE 2 PYLORI COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0495; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FEREDOXIN-LIKE (BETA-ALPHA-BETA-BETA-ALPHA-BETA), STRUCTURAL KEYWDS 2 GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.D.SEO,S.J.PARK,H.J.KIM,B.J.LEE REVDAT 3 09-MAR-22 2H9Z 1 REMARK REVDAT 2 24-FEB-09 2H9Z 1 VERSN REVDAT 1 01-MAY-07 2H9Z 0 JRNL AUTH M.D.SEO,S.J.PARK,H.J.KIM,B.J.LEE JRNL TITL SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN, HP0495 JRNL TITL 2 (Y495_HELPY) FROM HELICOBACTER PYLORI. JRNL REF PROTEINS V. 67 1189 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17373705 JRNL DOI 10.1002/PROT.21346 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER (CNS), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2H9Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038115. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 150MM SALT REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM HP0495, U-15N, 13C; 50MM REMARK 210 PHOSPHATE BUFFER NA, 150MM REMARK 210 SODIUM CHLORIDE, 1MM EDTA, 1MM REMARK 210 BMD; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; 3D_13C REMARK 210 -SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -47.09 -178.35 REMARK 500 1 SER A 5 -51.84 -121.17 REMARK 500 1 ASP A 26 33.94 -145.76 REMARK 500 1 PRO A 40 74.43 -61.29 REMARK 500 1 SER A 49 31.95 -166.52 REMARK 500 1 LYS A 53 -54.94 -170.32 REMARK 500 1 ASN A 65 -175.02 -177.44 REMARK 500 1 LEU A 79 -175.56 -60.28 REMARK 500 2 SER A 5 -43.33 -168.57 REMARK 500 2 PRO A 40 65.00 -65.11 REMARK 500 2 THR A 48 -46.45 -152.57 REMARK 500 2 SER A 49 32.85 -142.52 REMARK 500 2 ASN A 51 83.45 60.56 REMARK 500 2 ALA A 52 22.16 -143.92 REMARK 500 2 LYS A 53 -6.23 78.52 REMARK 500 2 ASN A 65 -175.00 -177.32 REMARK 500 2 LYS A 81 -63.98 -90.45 REMARK 500 3 SER A 3 75.70 -172.83 REMARK 500 3 SER A 5 -61.37 -122.74 REMARK 500 3 LYS A 6 173.53 59.78 REMARK 500 3 ASP A 26 41.22 -109.87 REMARK 500 3 PRO A 40 63.89 -67.77 REMARK 500 3 THR A 48 -44.80 -130.37 REMARK 500 3 SER A 49 32.42 -158.10 REMARK 500 3 LYS A 53 -36.65 85.77 REMARK 500 3 GLU A 62 99.92 -69.85 REMARK 500 3 ASN A 65 -177.88 -176.67 REMARK 500 4 PRO A 40 79.55 -66.34 REMARK 500 4 THR A 48 -79.42 -74.25 REMARK 500 4 ALA A 52 49.35 -91.70 REMARK 500 4 LYS A 53 -49.17 -162.46 REMARK 500 4 ASN A 65 -166.18 -169.15 REMARK 500 5 SER A 5 -75.48 -137.19 REMARK 500 5 LYS A 6 -166.23 -118.07 REMARK 500 5 PRO A 40 71.81 -64.00 REMARK 500 5 THR A 48 -50.00 -125.40 REMARK 500 5 SER A 49 37.34 -176.79 REMARK 500 5 ASN A 51 60.03 62.22 REMARK 500 5 LYS A 53 -6.13 78.04 REMARK 500 5 ASN A 65 -172.80 -175.82 REMARK 500 6 SER A 3 177.40 177.41 REMARK 500 6 PRO A 8 74.05 -63.14 REMARK 500 6 THR A 9 44.52 -142.42 REMARK 500 6 THR A 23 69.74 -118.21 REMARK 500 6 ASP A 26 39.99 -144.61 REMARK 500 6 PHE A 45 109.98 -59.72 REMARK 500 6 THR A 48 -46.63 -146.78 REMARK 500 6 LYS A 53 -48.40 80.11 REMARK 500 6 ASN A 65 -177.23 -176.74 REMARK 500 6 LEU A 79 -176.27 -61.93 REMARK 500 REMARK 500 THIS ENTRY HAS 160 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2H9Z A 1 86 UNP O25237 Y495_HELPY 1 86 SEQRES 1 A 86 MET PRO SER ASP SER LYS LYS PRO THR ILE ILE TYR PRO SEQRES 2 A 86 CYS LEU TRP ASP TYR ARG VAL ILE MET THR THR LYS ASP SEQRES 3 A 86 THR SER THR LEU LYS GLU LEU LEU GLU THR TYR GLN ARG SEQRES 4 A 86 PRO PHE LYS LEU GLU PHE LYS ASN THR SER LYS ASN ALA SEQRES 5 A 86 LYS PHE TYR SER PHE ASN VAL SER MET GLU VAL SER ASN SEQRES 6 A 86 GLU SER GLU ARG ASN GLU ILE PHE GLN LYS ILE SER GLN SEQRES 7 A 86 LEU ASP LYS VAL VAL GLN THR LEU HELIX 1 1 THR A 27 LEU A 34 1 8 HELIX 2 2 ASN A 65 SER A 77 1 13 SHEET 1 A 4 PHE A 41 LYS A 42 0 SHEET 2 A 4 TYR A 55 GLU A 62 -1 O SER A 60 N LYS A 42 SHEET 3 A 4 LEU A 15 MET A 22 -1 N MET A 22 O TYR A 55 SHEET 4 A 4 VAL A 82 THR A 85 -1 O GLN A 84 N ILE A 21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1