HEADER VIRUS 29-JUN-06 2HI5 TITLE MODEL FOR BACTERIOPHAGE FD FROM CRYO-EM COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAT PROTEIN B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAJOR COAT PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE FD; SOURCE 3 ORGANISM_TAXID: 10864; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELIX, HELICAL VIRUS, STRUCTURAL PROTEIN, DNA BINDING PROTEIN, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR Y.A.WANG,X.YU,S.OVERMAN,M.TSUBOI,G.J.THOMAS,E.H.EGELMAN REVDAT 6 14-FEB-24 2HI5 1 REMARK REVDAT 5 18-DEC-19 2HI5 1 REMARK CRYST1 SCALE REVDAT 4 18-JUL-18 2HI5 1 REMARK REVDAT 3 11-AUG-09 2HI5 1 REMARK REVDAT 2 24-FEB-09 2HI5 1 VERSN REVDAT 1 07-AUG-07 2HI5 0 JRNL AUTH Y.A.WANG,X.YU,S.OVERMAN,M.TSUBOI,G.J.THOMAS,E.H.EGELMAN JRNL TITL THE STRUCTURE OF A FILAMENTOUS BACTERIOPHAGE JRNL REF J.MOL.BIOL. V. 361 209 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16843489 JRNL DOI 10.1016/J.JMB.2006.06.027 REMARK 2 REMARK 2 RESOLUTION. 8.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : IHRSR REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.400 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 8.000 REMARK 3 NUMBER OF PARTICLES : 16367 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: TMV REMARK 3 REMARK 3 OTHER DETAILS: THE C-N BOND DISTANCE IS 0.09 A BETWEEN GLN15 AND REMARK 3 ALA16, 0.12 A BETWEEN ALA35 AND THR36 AND 0.44 A BETWEEN ALA25 REMARK 3 AND TRP26 REMARK 4 REMARK 4 2HI5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038373. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : BACTERIOPHAGE FD; COAT PROTEIN REMARK 245 B REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : NULL REMARK 245 SAMPLE DETAILS : VIRAL CAPSID REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 1400.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HELICAL POLYMER REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = -34.62 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 17.40 ANGSTROMS REMARK 300 IN ADDITION, THERE IS 5-FOLD CIRCULAR REMARK 300 SYMMETRY AROUND THE HELIX AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -0.992715 -0.120483 0.000000 0.00000 REMARK 350 BIOMT2 1 0.120483 -0.992715 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -87.00000 REMARK 350 BIOMT1 2 -0.421352 0.906897 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.906897 -0.421352 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -87.00000 REMARK 350 BIOMT1 3 0.732305 0.680977 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.680977 0.732305 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -87.00000 REMARK 350 BIOMT1 4 0.873942 -0.486030 0.000000 0.00000 REMARK 350 BIOMT2 4 0.486030 0.873942 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -87.00000 REMARK 350 BIOMT1 5 -0.192179 -0.981360 0.000000 0.00000 REMARK 350 BIOMT2 5 0.981360 -0.192179 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -87.00000 REMARK 350 BIOMT1 6 -0.748539 -0.663091 0.000000 0.00000 REMARK 350 BIOMT2 6 0.663091 -0.748539 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -69.60000 REMARK 350 BIOMT1 7 -0.861948 0.506997 0.000000 0.00000 REMARK 350 BIOMT2 7 -0.506997 -0.861948 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 -69.60000 REMARK 350 BIOMT1 8 0.215826 0.976432 0.000000 0.00000 REMARK 350 BIOMT2 8 -0.976432 0.215826 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 -69.60000 REMARK 350 BIOMT1 9 0.995336 0.096471 0.000000 0.00000 REMARK 350 BIOMT2 9 -0.096471 0.995336 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 -69.60000 REMARK 350 BIOMT1 10 0.399325 -0.916809 0.000000 0.00000 REMARK 350 BIOMT2 10 0.916809 0.399325 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 -69.60000 REMARK 350 BIOMT1 11 -0.239347 -0.970934 0.000000 0.00000 REMARK 350 BIOMT2 11 0.970934 -0.239347 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 1.000000 -52.20000 REMARK 350 BIOMT1 12 -0.997375 -0.072403 0.000000 0.00000 REMARK 350 BIOMT2 12 0.072403 -0.997375 0.000000 0.00000 REMARK 350 BIOMT3 12 0.000000 0.000000 1.000000 -52.20000 REMARK 350 BIOMT1 13 -0.377065 0.926187 0.000000 0.00000 REMARK 350 BIOMT2 13 -0.926187 -0.377065 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 -52.20000 REMARK 350 BIOMT1 14 0.764336 0.644818 0.000000 0.00000 REMARK 350 BIOMT2 14 -0.644818 0.764336 0.000000 0.00000 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 -52.20000 REMARK 350 BIOMT1 15 0.849451 -0.527668 0.000000 0.00000 REMARK 350 BIOMT2 15 0.527668 0.849451 0.000000 0.00000 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 -52.20000 REMARK 350 BIOMT1 16 0.354585 -0.935024 0.000000 0.00000 REMARK 350 BIOMT2 16 0.935024 0.354585 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 -34.80000 REMARK 350 BIOMT1 17 -0.779688 -0.626168 0.000000 0.00000 REMARK 350 BIOMT2 17 0.626168 -0.779688 0.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 0.000000 1.000000 -34.80000 REMARK 350 BIOMT1 18 -0.836458 0.548030 0.000000 0.00000 REMARK 350 BIOMT2 18 -0.548030 -0.836458 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 0.000000 1.000000 -34.80000 REMARK 350 BIOMT1 19 0.262728 0.964870 0.000000 0.00000 REMARK 350 BIOMT2 19 -0.964870 0.262728 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 1.000000 -34.80000 REMARK 350 BIOMT1 20 0.998833 0.048292 0.000000 0.00000 REMARK 350 BIOMT2 20 -0.048292 0.998833 0.000000 0.00000 REMARK 350 BIOMT3 20 0.000000 0.000000 1.000000 -34.80000 REMARK 350 BIOMT1 21 0.822978 -0.568074 0.000000 0.00000 REMARK 350 BIOMT2 21 0.568074 0.822978 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 0.000000 1.000000 -17.40000 REMARK 350 BIOMT1 22 -0.285956 -0.958243 0.000000 0.00000 REMARK 350 BIOMT2 22 0.958243 -0.285956 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 -17.40000 REMARK 350 BIOMT1 23 -0.999708 -0.024153 0.000000 0.00000 REMARK 350 BIOMT2 23 0.024153 -0.999708 0.000000 0.00000 REMARK 350 BIOMT3 23 0.000000 0.000000 1.000000 -17.40000 REMARK 350 BIOMT1 24 -0.331898 0.943315 0.000000 0.00000 REMARK 350 BIOMT2 24 -0.943315 -0.331898 0.000000 0.00000 REMARK 350 BIOMT3 24 0.000000 0.000000 1.000000 -17.40000 REMARK 350 BIOMT1 25 0.794584 0.607154 0.000000 0.00000 REMARK 350 BIOMT2 25 -0.607154 0.794584 0.000000 0.00000 REMARK 350 BIOMT3 25 0.000000 0.000000 1.000000 -17.40000 REMARK 350 BIOMT1 26 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 27 0.309017 -0.951057 0.000000 0.00000 REMARK 350 BIOMT2 27 0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 28 -0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 28 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 28 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 29 -0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 29 -0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 29 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 30 0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 30 -0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 31 0.822978 0.568074 0.000000 0.00000 REMARK 350 BIOMT2 31 -0.568074 0.822978 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 1.000000 17.40000 REMARK 350 BIOMT1 32 0.794584 -0.607154 0.000000 0.00000 REMARK 350 BIOMT2 32 0.607154 0.794584 0.000000 0.00000 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 17.40000 REMARK 350 BIOMT1 33 -0.331898 -0.943315 0.000000 0.00000 REMARK 350 BIOMT2 33 0.943315 -0.331898 0.000000 0.00000 REMARK 350 BIOMT3 33 0.000000 0.000000 1.000000 17.40000 REMARK 350 BIOMT1 34 -0.999708 0.024153 0.000000 0.00000 REMARK 350 BIOMT2 34 -0.024153 -0.999708 0.000000 0.00000 REMARK 350 BIOMT3 34 0.000000 0.000000 1.000000 17.40000 REMARK 350 BIOMT1 35 -0.285956 0.958243 0.000000 0.00000 REMARK 350 BIOMT2 35 -0.958243 -0.285956 0.000000 0.00000 REMARK 350 BIOMT3 35 0.000000 0.000000 1.000000 17.40000 REMARK 350 BIOMT1 36 0.354585 0.935024 0.000000 0.00000 REMARK 350 BIOMT2 36 -0.935024 0.354585 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 0.000000 1.000000 34.80000 REMARK 350 BIOMT1 37 0.998833 -0.048292 0.000000 0.00000 REMARK 350 BIOMT2 37 0.048292 0.998833 0.000000 0.00000 REMARK 350 BIOMT3 37 0.000000 0.000000 1.000000 34.80000 REMARK 350 BIOMT1 38 0.262728 -0.964870 0.000000 0.00000 REMARK 350 BIOMT2 38 0.964870 0.262728 0.000000 0.00000 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 34.80000 REMARK 350 BIOMT1 39 -0.836458 -0.548030 0.000000 0.00000 REMARK 350 BIOMT2 39 0.548030 -0.836458 0.000000 0.00000 REMARK 350 BIOMT3 39 0.000000 0.000000 1.000000 34.80000 REMARK 350 BIOMT1 40 -0.779688 0.626168 0.000000 0.00000 REMARK 350 BIOMT2 40 -0.626168 -0.779688 0.000000 0.00000 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 34.80000 REMARK 350 BIOMT1 41 -0.239347 0.970934 0.000000 0.00000 REMARK 350 BIOMT2 41 -0.970934 -0.239347 0.000000 0.00000 REMARK 350 BIOMT3 41 0.000000 0.000000 1.000000 52.20000 REMARK 350 BIOMT1 42 0.849451 0.527668 0.000000 0.00000 REMARK 350 BIOMT2 42 -0.527668 0.849451 0.000000 0.00000 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 52.20000 REMARK 350 BIOMT1 43 0.764336 -0.644818 0.000000 0.00000 REMARK 350 BIOMT2 43 0.644818 0.764336 0.000000 0.00000 REMARK 350 BIOMT3 43 0.000000 0.000000 1.000000 52.20000 REMARK 350 BIOMT1 44 -0.377065 -0.926187 0.000000 0.00000 REMARK 350 BIOMT2 44 0.926187 -0.377065 0.000000 0.00000 REMARK 350 BIOMT3 44 0.000000 0.000000 1.000000 52.20000 REMARK 350 BIOMT1 45 -0.997375 0.072403 0.000000 0.00000 REMARK 350 BIOMT2 45 -0.072403 -0.997375 0.000000 0.00000 REMARK 350 BIOMT3 45 0.000000 0.000000 1.000000 52.20000 REMARK 350 BIOMT1 46 -0.748539 0.663091 0.000000 0.00000 REMARK 350 BIOMT2 46 -0.663091 -0.748539 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 0.000000 1.000000 69.60000 REMARK 350 BIOMT1 47 0.399325 0.916809 0.000000 0.00000 REMARK 350 BIOMT2 47 -0.916809 0.399325 0.000000 0.00000 REMARK 350 BIOMT3 47 0.000000 0.000000 1.000000 69.60000 REMARK 350 BIOMT1 48 0.995336 -0.096471 0.000000 0.00000 REMARK 350 BIOMT2 48 0.096471 0.995336 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 0.000000 1.000000 69.60000 REMARK 350 BIOMT1 49 0.215826 -0.976432 0.000000 0.00000 REMARK 350 BIOMT2 49 0.976432 0.215826 0.000000 0.00000 REMARK 350 BIOMT3 49 0.000000 0.000000 1.000000 69.60000 REMARK 350 BIOMT1 50 -0.861948 -0.506997 0.000000 0.00000 REMARK 350 BIOMT2 50 0.506997 -0.861948 0.000000 0.00000 REMARK 350 BIOMT3 50 0.000000 0.000000 1.000000 69.60000 REMARK 350 BIOMT1 51 -0.992715 0.120483 0.000000 0.00000 REMARK 350 BIOMT2 51 -0.120483 -0.992715 0.000000 0.00000 REMARK 350 BIOMT3 51 0.000000 0.000000 1.000000 87.00000 REMARK 350 BIOMT1 52 -0.192179 0.981360 0.000000 0.00000 REMARK 350 BIOMT2 52 -0.981360 -0.192179 0.000000 0.00000 REMARK 350 BIOMT3 52 0.000000 0.000000 1.000000 87.00000 REMARK 350 BIOMT1 53 0.873942 0.486030 0.000000 0.00000 REMARK 350 BIOMT2 53 -0.486030 0.873942 0.000000 0.00000 REMARK 350 BIOMT3 53 0.000000 0.000000 1.000000 87.00000 REMARK 350 BIOMT1 54 0.732305 -0.680977 0.000000 0.00000 REMARK 350 BIOMT2 54 0.680977 0.732305 0.000000 0.00000 REMARK 350 BIOMT3 54 0.000000 0.000000 1.000000 87.00000 REMARK 350 BIOMT1 55 -0.421352 -0.906897 0.000000 0.00000 REMARK 350 BIOMT2 55 0.906897 -0.421352 0.000000 0.00000 REMARK 350 BIOMT3 55 0.000000 0.000000 1.000000 87.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 ASP A 4 REMARK 465 ASP A 5 REMARK 465 LYS A 48 REMARK 465 ALA A 49 REMARK 465 SER A 50 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 35 N THR A 36 1.20 REMARK 500 O GLN A 15 N ALA A 16 1.22 REMARK 500 O ALA A 35 CA THR A 36 1.26 REMARK 500 C ALA A 35 CA THR A 36 1.43 REMARK 500 C ALA A 25 CA TRP A 26 1.43 REMARK 500 O GLN A 15 CA ALA A 16 1.43 REMARK 500 CA ALA A 35 N THR A 36 1.50 REMARK 500 O ALA A 25 N TRP A 26 1.50 REMARK 500 O LEU A 14 N SER A 17 1.52 REMARK 500 CA ALA A 25 N TRP A 26 1.54 REMARK 500 C GLN A 15 CA ALA A 16 1.55 REMARK 500 O ALA A 25 CA TRP A 26 1.57 REMARK 500 CA GLN A 15 N ALA A 16 1.61 REMARK 500 O LEU A 14 CB SER A 17 1.83 REMARK 500 O LEU A 14 CA SER A 17 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 15 C ALA A 16 N -1.247 REMARK 500 ALA A 25 C TRP A 26 N -0.896 REMARK 500 TRP A 26 NE1 TRP A 26 CE2 -0.093 REMARK 500 ALA A 35 C THR A 36 N -1.212 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 15 CA - C - N ANGL. DEV. = 43.6 DEGREES REMARK 500 GLN A 15 O - C - N ANGL. DEV. = -57.2 DEGREES REMARK 500 ALA A 16 C - N - CA ANGL. DEV. = 45.2 DEGREES REMARK 500 ALA A 25 CA - C - N ANGL. DEV. = -33.1 DEGREES REMARK 500 TRP A 26 C - N - CA ANGL. DEV. = -45.5 DEGREES REMARK 500 ALA A 35 CA - C - N ANGL. DEV. = -40.0 DEGREES REMARK 500 ALA A 35 O - C - N ANGL. DEV. = -62.0 DEGREES REMARK 500 THR A 36 C - N - CA ANGL. DEV. = -51.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 15 32.93 -70.42 REMARK 500 ALA A 16 -40.26 -12.24 REMARK 500 ALA A 25 10.41 -67.59 REMARK 500 ALA A 35 88.39 -65.33 REMARK 500 THR A 36 -34.97 140.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 15 ALA A 16 52.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN A 15 -74.17 REMARK 500 ALA A 25 -42.01 REMARK 500 ALA A 35 -127.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-1240 RELATED DB: EMDB DBREF 2HI5 A 1 50 UNP P69539 COATB_BPFD 24 73 SEQRES 1 A 50 ALA GLU GLY ASP ASP PRO ALA LYS ALA ALA PHE ASP SER SEQRES 2 A 50 LEU GLN ALA SER ALA THR GLU TYR ILE GLY TYR ALA TRP SEQRES 3 A 50 ALA MET VAL VAL VAL ILE VAL GLY ALA THR ILE GLY ILE SEQRES 4 A 50 LYS LEU PHE LYS LYS PHE THR SER LYS ALA SER HELIX 1 1 PRO A 6 SER A 47 1 42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000