HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-JUN-06 2HJ1 TITLE CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF PROTEIN HI0395 FROM TITLE 2 HAEMOPHILUS INFLUENZAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 281310; SOURCE 4 STRAIN: 86-028NP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX KEYWDS 2 RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,Y.V.PATSKOVSKY,R.TORO,S.C.ALMO,S.K.BURLEY,NEW YORK SGX AUTHOR 2 RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 14-FEB-24 2HJ1 1 REMARK REVDAT 6 03-FEB-21 2HJ1 1 AUTHOR REMARK SEQADV REVDAT 5 18-OCT-17 2HJ1 1 REMARK REVDAT 4 13-JUL-11 2HJ1 1 VERSN REVDAT 3 24-FEB-09 2HJ1 1 VERSN REVDAT 2 05-SEP-06 2HJ1 1 JRNL AUTHOR REVDAT 1 29-AUG-06 2HJ1 0 JRNL AUTH U.A.RAMAGOPAL,Y.V.PATSKOVSKY,R.TORO,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF JRNL TITL 2 HYPOTHETICAL PROTEIN FROM HAEMOPHILUS INFLUENZAE (CASP JRNL TITL 3 TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 19244 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 987 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1307 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1269 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.156 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.632 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1369 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1864 ; 1.799 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 167 ;13.882 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 65 ;40.054 ;24.308 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 249 ;16.777 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;23.380 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 211 ; 0.142 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1025 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 557 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 932 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 74 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 71 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.254 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 849 ; 1.322 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1345 ; 2.227 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 588 ; 2.924 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 518 ; 4.528 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HJ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-06; 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X4A; X29A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98; 1.743 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19260 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : 0.38500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.51350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.19050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.19050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.77025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.19050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.19050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.25675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.19050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.19050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 87.77025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.19050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.19050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.25675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.51350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -216.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 SER A 9 REMARK 465 LEU A 10 REMARK 465 ALA A 88 REMARK 465 ASP A 89 REMARK 465 PRO A 90 REMARK 465 LYS A 91 REMARK 465 GLU A 92 REMARK 465 ILE A 93 REMARK 465 ARG A 94 REMARK 465 ARG A 95 REMARK 465 GLU A 96 REMARK 465 GLY A 97 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 SER B 9 REMARK 465 PRO B 90 REMARK 465 LYS B 91 REMARK 465 GLU B 92 REMARK 465 ILE B 93 REMARK 465 ARG B 94 REMARK 465 ARG B 95 REMARK 465 GLU B 96 REMARK 465 GLY B 97 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 24 90.01 -164.94 REMARK 500 ARG B 66 135.60 -171.15 REMARK 500 ALA B 88 -128.92 -150.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 67 ILE A 68 132.80 REMARK 500 GLU B 23 ARG B 24 149.59 REMARK 500 LEU B 87 ALA B 88 77.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-2736C RELATED DB: TARGETDB DBREF 2HJ1 A 11 95 UNP Q4QNE7 Q4QNE7_HAEI8 2 86 DBREF 2HJ1 B 11 95 UNP Q4QNE7 Q4QNE7_HAEI8 2 86 SEQADV 2HJ1 MET A 1 UNP Q4QNE7 INITIATING METHIONINE SEQADV 2HJ1 ALA A 2 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 HIS A 3 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS A 4 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS A 5 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS A 6 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS A 7 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS A 8 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 SER A 9 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 LEU A 10 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 GLU A 96 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 GLY A 97 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 MET B 1 UNP Q4QNE7 INITIATING METHIONINE SEQADV 2HJ1 ALA B 2 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 HIS B 3 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS B 4 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS B 5 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS B 6 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS B 7 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 HIS B 8 UNP Q4QNE7 EXPRESSION TAG SEQADV 2HJ1 SER B 9 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 LEU B 10 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 GLU B 96 UNP Q4QNE7 CLONING ARTIFACT SEQADV 2HJ1 GLY B 97 UNP Q4QNE7 CLONING ARTIFACT SEQRES 1 A 97 MET ALA HIS HIS HIS HIS HIS HIS SER LEU ASN GLN ILE SEQRES 2 A 97 ASN ILE GLU ILE ALA TYR ALA PHE PRO GLU ARG TYR TYR SEQRES 3 A 97 LEU LYS SER PHE GLN VAL ASP GLU GLY ILE THR VAL GLN SEQRES 4 A 97 THR ALA ILE THR GLN SER GLY ILE LEU SER GLN PHE PRO SEQRES 5 A 97 GLU ILE ASP LEU SER THR ASN LYS ILE GLY ILE PHE SER SEQRES 6 A 97 ARG PRO ILE LYS LEU THR ASP VAL LEU LYS GLU GLY ASP SEQRES 7 A 97 ARG ILE GLU ILE TYR ARG PRO LEU LEU ALA ASP PRO LYS SEQRES 8 A 97 GLU ILE ARG ARG GLU GLY SEQRES 1 B 97 MET ALA HIS HIS HIS HIS HIS HIS SER LEU ASN GLN ILE SEQRES 2 B 97 ASN ILE GLU ILE ALA TYR ALA PHE PRO GLU ARG TYR TYR SEQRES 3 B 97 LEU LYS SER PHE GLN VAL ASP GLU GLY ILE THR VAL GLN SEQRES 4 B 97 THR ALA ILE THR GLN SER GLY ILE LEU SER GLN PHE PRO SEQRES 5 B 97 GLU ILE ASP LEU SER THR ASN LYS ILE GLY ILE PHE SER SEQRES 6 B 97 ARG PRO ILE LYS LEU THR ASP VAL LEU LYS GLU GLY ASP SEQRES 7 B 97 ARG ILE GLU ILE TYR ARG PRO LEU LEU ALA ASP PRO LYS SEQRES 8 B 97 GLU ILE ARG ARG GLU GLY HET SO4 A 202 5 HET SO4 B 201 5 HET SO4 B 203 5 HET SO4 B 204 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *75(H2 O) HELIX 1 1 THR A 37 GLY A 46 1 10 HELIX 2 2 GLY A 46 PHE A 51 1 6 HELIX 3 3 THR B 37 GLY B 46 1 10 HELIX 4 4 GLY B 46 PHE B 51 1 6 SHEET 1 A 8 ARG A 24 ASP A 33 0 SHEET 2 A 8 GLN A 12 PHE A 21 -1 N TYR A 19 O TYR A 26 SHEET 3 A 8 ARG B 79 TYR B 83 1 O ILE B 80 N ALA A 18 SHEET 4 A 8 LYS A 60 SER A 65 -1 N PHE A 64 O ARG B 79 SHEET 5 A 8 ILE B 61 SER B 65 -1 O ILE B 63 N SER A 65 SHEET 6 A 8 ARG A 79 ILE A 82 -1 N GLU A 81 O GLY B 62 SHEET 7 A 8 GLN B 12 TYR B 19 1 O GLU B 16 N ILE A 80 SHEET 8 A 8 TYR B 26 ASP B 33 -1 O VAL B 32 N ILE B 13 CISPEP 1 ARG A 66 PRO A 67 0 -5.90 CISPEP 2 ARG A 66 PRO A 67 0 -7.12 CISPEP 3 LEU A 86 LEU A 87 0 5.10 CISPEP 4 ARG B 66 PRO B 67 0 -5.58 SITE 1 AC1 7 LYS A 60 LYS B 28 SER B 29 ARG B 66 SITE 2 AC1 7 TYR B 83 SO4 B 203 HOH B 238 SITE 1 AC2 4 ARG A 66 PRO A 67 HOH A 236 LYS B 60 SITE 1 AC3 6 GLY A 77 ARG A 79 GLU B 16 PHE B 64 SITE 2 AC3 6 ARG B 66 SO4 B 201 SITE 1 AC4 5 TYR A 25 LEU A 27 PHE B 21 GLN B 50 SITE 2 AC4 5 ARG B 79 CRYST1 74.381 74.381 117.027 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013444 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008545 0.00000