HEADER LYASE 17-JUL-06 2HOX TITLE ALLIINASE FROM ALLIUM SATIVUM (GARLIC) CAVEAT 2HOX NAG A 4500 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALLIIN LYASE 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: ALLIIN LYASE 1; COMPND 5 SYNONYM: ALLIINASE 1, CYSTEINE SULPHOXIDE LYASE 1; COMPND 6 EC: 4.4.1.4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALLIUM SATIVUM; SOURCE 3 ORGANISM_COMMON: GARLIC; SOURCE 4 ORGANISM_TAXID: 4682; SOURCE 5 TISSUE: BULBS KEYWDS CYSTEINE SULPHOXIDE LYASE, ALLIINASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.W.SHIMON,A.RABINKOV,M.WILCHECK,D.MIRELMAN,F.FROLOW REVDAT 7 30-AUG-23 2HOX 1 HETSYN LINK REVDAT 6 29-JUL-20 2HOX 1 CAVEAT COMPND REMARK HETNAM REVDAT 6 2 1 SSBOND LINK SITE ATOM REVDAT 5 16-APR-14 2HOX 1 REMARK REVDAT 4 13-JUL-11 2HOX 1 VERSN REVDAT 3 24-FEB-09 2HOX 1 VERSN REVDAT 2 13-FEB-07 2HOX 1 JRNL REVDAT 1 06-FEB-07 2HOX 0 JRNL AUTH L.J.SHIMON,A.RABINKOV,I.SHIN,T.MIRON,D.MIRELMAN,M.WILCHEK, JRNL AUTH 2 F.FROLOW JRNL TITL TWO STRUCTURES OF ALLIINASE FROM ALLIIUM SATIVUM L.: APO JRNL TITL 2 FORM AND TERNARY COMPLEX WITH AMINOACRYLATE REACTION JRNL TITL 3 INTERMEDIATE COVALENTLY BOUND TO THE PLP COFACTOR. JRNL REF J.MOL.BIOL. V. 366 611 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17174334 JRNL DOI 10.1016/J.JMB.2006.11.041 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH L.J.W.SHIMON,A.RABINKOV,T.MIRON,D.MIRELMAN,M.WILCHECK, REMARK 1 AUTH 2 F.FROLOW REMARK 1 TITL ALLIIN LYASE (ALLIINASE FROM GARLIC (ALLIUM SATIVUM) REMARK 1 TITL 2 CRYSTALLIZATION AND PRELIMINARY X-RAY CHARACTERIZATION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 58 1335 2002 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0013 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 310776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 16535 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.43 REMARK 3 REFLECTION IN BIN (WORKING SET) : 17361 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 960 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 408 REMARK 3 SOLVENT ATOMS : 2669 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.44000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.063 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.305 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 14576 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 9951 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19777 ; 1.728 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 24079 ; 0.991 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1708 ; 6.113 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 679 ;29.808 ;24.168 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2444 ;12.538 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 74 ;15.317 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2123 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15861 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2981 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2934 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 10920 ; 0.200 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7287 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 7220 ; 0.093 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1956 ; 0.211 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.241 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 88 ; 0.284 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 83 ; 0.227 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 10909 ; 2.554 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3445 ; 0.529 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 13797 ; 2.860 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7238 ; 4.542 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5977 ; 5.987 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 30843 ; 6.646 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 2178 ;25.393 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 24090 ;10.818 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HOX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9333 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 327315 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 46.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.080 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : 40.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.59800 REMARK 200 R SYM FOR SHELL (I) : 0.59800 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1LK9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM ACETATE, TRI- REMARK 280 SODIUM CITRATE, PH 5.6, PH 5.60, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.44600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 29170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 426 REMARK 465 LYS A 427 REMARK 465 ARG C 426 REMARK 465 LYS C 427 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 6516 O HOH A 6720 1.71 REMARK 500 O HOH C 6008 O HOH C 6677 1.75 REMARK 500 O HOH A 6631 O HOH A 6720 1.80 REMARK 500 O HOH C 6135 O HOH C 6744 1.84 REMARK 500 OH TYR C 277 O HOH C 6486 1.85 REMARK 500 O HOH C 6435 O HOH C 6486 1.88 REMARK 500 O HOH C 6728 O HOH C 6744 1.91 REMARK 500 SG CYS D 41 O HOH D 6250 1.94 REMARK 500 O HOH A 6672 O HOH A 6710 1.94 REMARK 500 CE2 TYR C 277 O HOH C 6486 1.98 REMARK 500 O HOH C 6007 O HOH C 6662 2.00 REMARK 500 O3 NAG B 3500 O HOH B 6270 2.01 REMARK 500 O ASP D 123 O HOH D 6449 2.01 REMARK 500 CZ TYR C 277 O HOH C 6486 2.02 REMARK 500 O HOH C 6101 O HOH C 6493 2.03 REMARK 500 O HOH C 6231 O HOH C 6718 2.03 REMARK 500 O HOH A 6015 O HOH A 6640 2.05 REMARK 500 O HOH A 6672 O HOH A 6718 2.05 REMARK 500 O GLN B 55 O HOH B 6653 2.05 REMARK 500 O HOH D 6010 O HOH D 6420 2.06 REMARK 500 O HOH C 6040 O HOH C 6740 2.06 REMARK 500 O HOH B 6640 O HOH B 6648 2.06 REMARK 500 O HOH A 6682 O HOH A 6709 2.07 REMARK 500 O HOH A 6710 O HOH B 6594 2.08 REMARK 500 O HOH C 6441 O HOH C 6477 2.09 REMARK 500 O HOH C 6240 O HOH C 6412 2.09 REMARK 500 O HOH C 6660 O HOH C 6677 2.11 REMARK 500 O HOH A 6745 O HOH D 6336 2.12 REMARK 500 O HOH D 6412 O HOH D 6430 2.12 REMARK 500 OE1 GLU C 343 O HOH C 6286 2.12 REMARK 500 O HOH A 6280 O HOH A 6450 2.13 REMARK 500 OH TYR D 277 O HOH D 6442 2.14 REMARK 500 O HOH D 6156 O HOH D 6393 2.14 REMARK 500 OD2 ASP A 49 O HOH A 6477 2.15 REMARK 500 O HOH B 6419 O HOH B 6497 2.16 REMARK 500 O2 BMA E 5 O HOH A 6718 2.16 REMARK 500 O HOH B 6497 O HOH B 6643 2.17 REMARK 500 O HOH B 6124 O HOH B 6681 2.18 REMARK 500 OH TYR B 377 O HOH B 6343 2.18 REMARK 500 O HOH D 6128 O HOH D 6315 2.18 REMARK 500 O HOH A 6641 O HOH A 6713 2.18 REMARK 500 O HOH C 6084 O HOH C 6753 2.19 REMARK 500 NZ LYS B 77 O HOH B 6682 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 6436 O HOH C 6361 1455 1.99 REMARK 500 O HOH A 6664 O HOH B 6132 2645 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 277 CE1 TYR A 277 CZ -0.082 REMARK 500 TYR C 277 CE1 TYR C 277 CZ -0.088 REMARK 500 TYR D 224 CZ TYR D 224 CE2 -0.089 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 89 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 259 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG C 89 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 3 -90.88 -120.27 REMARK 500 SER A 21 -159.75 54.15 REMARK 500 ARG A 89 67.05 36.78 REMARK 500 SER A 98 36.20 -148.91 REMARK 500 THR A 282 -2.61 -143.16 REMARK 500 SER A 360 62.76 -156.45 REMARK 500 ARG A 384 34.25 72.06 REMARK 500 THR B 3 -90.44 -127.23 REMARK 500 GLU B 22 11.32 58.85 REMARK 500 ARG B 89 65.28 38.15 REMARK 500 SER B 98 42.98 -153.93 REMARK 500 THR B 282 -1.60 -142.54 REMARK 500 SER B 360 58.86 -151.06 REMARK 500 ARG B 384 32.65 75.82 REMARK 500 THR C 3 -92.12 -121.97 REMARK 500 SER C 21 -147.54 51.26 REMARK 500 ARG C 89 66.19 31.56 REMARK 500 SER C 98 38.61 -152.30 REMARK 500 THR C 282 -4.35 -141.48 REMARK 500 SER C 360 57.68 -152.52 REMARK 500 ARG C 384 35.59 71.38 REMARK 500 THR D 3 -97.06 -120.85 REMARK 500 GLU D 34 68.40 33.50 REMARK 500 ARG D 89 64.86 34.36 REMARK 500 SER D 98 38.56 -154.59 REMARK 500 THR D 282 -1.41 -140.73 REMARK 500 SER D 360 58.39 -154.67 REMARK 500 ARG D 384 30.80 77.60 REMARK 500 LYS D 406 -159.15 -87.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA C 424 LYS C 425 149.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 507 REMARK 610 NAG B 502 REMARK 610 NAG B 503 REMARK 610 NAG C 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HOR RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS A VARIATION IN A SEQUENCE ASSIGNEMENT IN THE REMARK 999 LITERATURE,ONE CONTAINS AN ASP IN POSITION 176 AND ONE REMARK 999 CONTAINS ASN. THE AUTHORS HAVE BUILT AND REFINED THE REMARK 999 STRUCTURE WITH AN ASP PRESENT IN THIS POSITION IN ACCORD REMARK 999 WITH THE RELATED STRUCTURE 1LK9. DBREF 2HOX A 1 427 UNP Q01594 ALLN1_ALLSA 39 465 DBREF 2HOX B 1 427 UNP Q01594 ALLN1_ALLSA 39 465 DBREF 2HOX C 1 427 UNP Q01594 ALLN1_ALLSA 39 465 DBREF 2HOX D 1 427 UNP Q01594 ALLN1_ALLSA 39 465 SEQADV 2HOX ASP A 176 UNP Q01594 ASN 214 SEE REMARK 999 SEQADV 2HOX ASP B 176 UNP Q01594 ASN 214 SEE REMARK 999 SEQADV 2HOX ASP C 176 UNP Q01594 ASN 214 SEE REMARK 999 SEQADV 2HOX ASP D 176 UNP Q01594 ASN 214 SEE REMARK 999 SEQRES 1 A 427 LYS MET THR TRP THR MET LYS ALA ALA GLU GLU ALA GLU SEQRES 2 A 427 ALA VAL ALA ASN ILE ASN CYS SER GLU HIS GLY ARG ALA SEQRES 3 A 427 PHE LEU ASP GLY ILE ILE SER GLU GLY SER PRO LYS CYS SEQRES 4 A 427 GLU CYS ASN THR CYS TYR THR GLY PRO ASP CYS SER GLU SEQRES 5 A 427 LYS ILE GLN GLY CYS SER ALA ASP VAL ALA SER GLY ASP SEQRES 6 A 427 GLY LEU PHE LEU GLU GLU TYR TRP LYS GLN HIS LYS GLU SEQRES 7 A 427 ALA SER ALA VAL LEU VAL SER PRO TRP HIS ARG MET SER SEQRES 8 A 427 TYR PHE PHE ASN PRO VAL SER ASN PHE ILE SER PHE GLU SEQRES 9 A 427 LEU GLU LYS THR ILE LYS GLU LEU HIS GLU VAL VAL GLY SEQRES 10 A 427 ASN ALA ALA ALA LYS ASP ARG TYR ILE VAL PHE GLY VAL SEQRES 11 A 427 GLY VAL THR GLN LEU ILE HIS GLY LEU VAL ILE SER LEU SEQRES 12 A 427 SER PRO ASN MET THR ALA THR PRO ASP ALA PRO GLU SER SEQRES 13 A 427 LYS VAL VAL ALA HIS ALA PRO PHE TYR PRO VAL PHE ARG SEQRES 14 A 427 GLU GLN THR LYS TYR PHE ASP LYS LYS GLY TYR VAL TRP SEQRES 15 A 427 ALA GLY ASN ALA ALA ASN TYR VAL ASN VAL SER ASN PRO SEQRES 16 A 427 GLU GLN TYR ILE GLU MET VAL THR SER PRO ASN ASN PRO SEQRES 17 A 427 GLU GLY LEU LEU ARG HIS ALA VAL ILE LYS GLY CYS LYS SEQRES 18 A 427 SER ILE TYR ASP MET VAL TYR TYR TRP PRO HIS TYR THR SEQRES 19 A 427 PRO ILE LYS TYR LYS ALA ASP GLU ASP ILE LEU LEU PHE SEQRES 20 A 427 THR MET SER LYS PHE THR GLY HIS SER GLY SER ARG PHE SEQRES 21 A 427 GLY TRP ALA LEU ILE LYS ASP GLU SER VAL TYR ASN ASN SEQRES 22 A 427 LEU LEU ASN TYR MET THR LYS ASN THR GLU GLY THR PRO SEQRES 23 A 427 ARG GLU THR GLN LEU ARG SER LEU LYS VAL LEU LYS GLU SEQRES 24 A 427 VAL VAL ALA MET VAL LYS THR GLN LYS GLY THR MET ARG SEQRES 25 A 427 ASP LEU ASN THR PHE GLY PHE LYS LYS LEU ARG GLU ARG SEQRES 26 A 427 TRP VAL ASN ILE THR ALA LEU LEU ASP GLN SER ASP ARG SEQRES 27 A 427 PHE SER TYR GLN GLU LEU PRO GLN SER GLU TYR CYS ASN SEQRES 28 A 427 TYR PHE ARG ARG MET ARG PRO PRO SER PRO SER TYR ALA SEQRES 29 A 427 TRP VAL LYS CYS GLU TRP GLU GLU ASP LYS ASP CYS TYR SEQRES 30 A 427 GLN THR PHE GLN ASN GLY ARG ILE ASN THR GLN ASN GLY SEQRES 31 A 427 VAL GLY PHE GLU ALA SER SER ARG TYR VAL ARG LEU SER SEQRES 32 A 427 LEU ILE LYS THR GLN ASP ASP PHE ASP GLN LEU MET TYR SEQRES 33 A 427 TYR LEU LYS ASP MET VAL LYS ALA LYS ARG LYS SEQRES 1 B 427 LYS MET THR TRP THR MET LYS ALA ALA GLU GLU ALA GLU SEQRES 2 B 427 ALA VAL ALA ASN ILE ASN CYS SER GLU HIS GLY ARG ALA SEQRES 3 B 427 PHE LEU ASP GLY ILE ILE SER GLU GLY SER PRO LYS CYS SEQRES 4 B 427 GLU CYS ASN THR CYS TYR THR GLY PRO ASP CYS SER GLU SEQRES 5 B 427 LYS ILE GLN GLY CYS SER ALA ASP VAL ALA SER GLY ASP SEQRES 6 B 427 GLY LEU PHE LEU GLU GLU TYR TRP LYS GLN HIS LYS GLU SEQRES 7 B 427 ALA SER ALA VAL LEU VAL SER PRO TRP HIS ARG MET SER SEQRES 8 B 427 TYR PHE PHE ASN PRO VAL SER ASN PHE ILE SER PHE GLU SEQRES 9 B 427 LEU GLU LYS THR ILE LYS GLU LEU HIS GLU VAL VAL GLY SEQRES 10 B 427 ASN ALA ALA ALA LYS ASP ARG TYR ILE VAL PHE GLY VAL SEQRES 11 B 427 GLY VAL THR GLN LEU ILE HIS GLY LEU VAL ILE SER LEU SEQRES 12 B 427 SER PRO ASN MET THR ALA THR PRO ASP ALA PRO GLU SER SEQRES 13 B 427 LYS VAL VAL ALA HIS ALA PRO PHE TYR PRO VAL PHE ARG SEQRES 14 B 427 GLU GLN THR LYS TYR PHE ASP LYS LYS GLY TYR VAL TRP SEQRES 15 B 427 ALA GLY ASN ALA ALA ASN TYR VAL ASN VAL SER ASN PRO SEQRES 16 B 427 GLU GLN TYR ILE GLU MET VAL THR SER PRO ASN ASN PRO SEQRES 17 B 427 GLU GLY LEU LEU ARG HIS ALA VAL ILE LYS GLY CYS LYS SEQRES 18 B 427 SER ILE TYR ASP MET VAL TYR TYR TRP PRO HIS TYR THR SEQRES 19 B 427 PRO ILE LYS TYR LYS ALA ASP GLU ASP ILE LEU LEU PHE SEQRES 20 B 427 THR MET SER LYS PHE THR GLY HIS SER GLY SER ARG PHE SEQRES 21 B 427 GLY TRP ALA LEU ILE LYS ASP GLU SER VAL TYR ASN ASN SEQRES 22 B 427 LEU LEU ASN TYR MET THR LYS ASN THR GLU GLY THR PRO SEQRES 23 B 427 ARG GLU THR GLN LEU ARG SER LEU LYS VAL LEU LYS GLU SEQRES 24 B 427 VAL VAL ALA MET VAL LYS THR GLN LYS GLY THR MET ARG SEQRES 25 B 427 ASP LEU ASN THR PHE GLY PHE LYS LYS LEU ARG GLU ARG SEQRES 26 B 427 TRP VAL ASN ILE THR ALA LEU LEU ASP GLN SER ASP ARG SEQRES 27 B 427 PHE SER TYR GLN GLU LEU PRO GLN SER GLU TYR CYS ASN SEQRES 28 B 427 TYR PHE ARG ARG MET ARG PRO PRO SER PRO SER TYR ALA SEQRES 29 B 427 TRP VAL LYS CYS GLU TRP GLU GLU ASP LYS ASP CYS TYR SEQRES 30 B 427 GLN THR PHE GLN ASN GLY ARG ILE ASN THR GLN ASN GLY SEQRES 31 B 427 VAL GLY PHE GLU ALA SER SER ARG TYR VAL ARG LEU SER SEQRES 32 B 427 LEU ILE LYS THR GLN ASP ASP PHE ASP GLN LEU MET TYR SEQRES 33 B 427 TYR LEU LYS ASP MET VAL LYS ALA LYS ARG LYS SEQRES 1 C 427 LYS MET THR TRP THR MET LYS ALA ALA GLU GLU ALA GLU SEQRES 2 C 427 ALA VAL ALA ASN ILE ASN CYS SER GLU HIS GLY ARG ALA SEQRES 3 C 427 PHE LEU ASP GLY ILE ILE SER GLU GLY SER PRO LYS CYS SEQRES 4 C 427 GLU CYS ASN THR CYS TYR THR GLY PRO ASP CYS SER GLU SEQRES 5 C 427 LYS ILE GLN GLY CYS SER ALA ASP VAL ALA SER GLY ASP SEQRES 6 C 427 GLY LEU PHE LEU GLU GLU TYR TRP LYS GLN HIS LYS GLU SEQRES 7 C 427 ALA SER ALA VAL LEU VAL SER PRO TRP HIS ARG MET SER SEQRES 8 C 427 TYR PHE PHE ASN PRO VAL SER ASN PHE ILE SER PHE GLU SEQRES 9 C 427 LEU GLU LYS THR ILE LYS GLU LEU HIS GLU VAL VAL GLY SEQRES 10 C 427 ASN ALA ALA ALA LYS ASP ARG TYR ILE VAL PHE GLY VAL SEQRES 11 C 427 GLY VAL THR GLN LEU ILE HIS GLY LEU VAL ILE SER LEU SEQRES 12 C 427 SER PRO ASN MET THR ALA THR PRO ASP ALA PRO GLU SER SEQRES 13 C 427 LYS VAL VAL ALA HIS ALA PRO PHE TYR PRO VAL PHE ARG SEQRES 14 C 427 GLU GLN THR LYS TYR PHE ASP LYS LYS GLY TYR VAL TRP SEQRES 15 C 427 ALA GLY ASN ALA ALA ASN TYR VAL ASN VAL SER ASN PRO SEQRES 16 C 427 GLU GLN TYR ILE GLU MET VAL THR SER PRO ASN ASN PRO SEQRES 17 C 427 GLU GLY LEU LEU ARG HIS ALA VAL ILE LYS GLY CYS LYS SEQRES 18 C 427 SER ILE TYR ASP MET VAL TYR TYR TRP PRO HIS TYR THR SEQRES 19 C 427 PRO ILE LYS TYR LYS ALA ASP GLU ASP ILE LEU LEU PHE SEQRES 20 C 427 THR MET SER LYS PHE THR GLY HIS SER GLY SER ARG PHE SEQRES 21 C 427 GLY TRP ALA LEU ILE LYS ASP GLU SER VAL TYR ASN ASN SEQRES 22 C 427 LEU LEU ASN TYR MET THR LYS ASN THR GLU GLY THR PRO SEQRES 23 C 427 ARG GLU THR GLN LEU ARG SER LEU LYS VAL LEU LYS GLU SEQRES 24 C 427 VAL VAL ALA MET VAL LYS THR GLN LYS GLY THR MET ARG SEQRES 25 C 427 ASP LEU ASN THR PHE GLY PHE LYS LYS LEU ARG GLU ARG SEQRES 26 C 427 TRP VAL ASN ILE THR ALA LEU LEU ASP GLN SER ASP ARG SEQRES 27 C 427 PHE SER TYR GLN GLU LEU PRO GLN SER GLU TYR CYS ASN SEQRES 28 C 427 TYR PHE ARG ARG MET ARG PRO PRO SER PRO SER TYR ALA SEQRES 29 C 427 TRP VAL LYS CYS GLU TRP GLU GLU ASP LYS ASP CYS TYR SEQRES 30 C 427 GLN THR PHE GLN ASN GLY ARG ILE ASN THR GLN ASN GLY SEQRES 31 C 427 VAL GLY PHE GLU ALA SER SER ARG TYR VAL ARG LEU SER SEQRES 32 C 427 LEU ILE LYS THR GLN ASP ASP PHE ASP GLN LEU MET TYR SEQRES 33 C 427 TYR LEU LYS ASP MET VAL LYS ALA LYS ARG LYS SEQRES 1 D 427 LYS MET THR TRP THR MET LYS ALA ALA GLU GLU ALA GLU SEQRES 2 D 427 ALA VAL ALA ASN ILE ASN CYS SER GLU HIS GLY ARG ALA SEQRES 3 D 427 PHE LEU ASP GLY ILE ILE SER GLU GLY SER PRO LYS CYS SEQRES 4 D 427 GLU CYS ASN THR CYS TYR THR GLY PRO ASP CYS SER GLU SEQRES 5 D 427 LYS ILE GLN GLY CYS SER ALA ASP VAL ALA SER GLY ASP SEQRES 6 D 427 GLY LEU PHE LEU GLU GLU TYR TRP LYS GLN HIS LYS GLU SEQRES 7 D 427 ALA SER ALA VAL LEU VAL SER PRO TRP HIS ARG MET SER SEQRES 8 D 427 TYR PHE PHE ASN PRO VAL SER ASN PHE ILE SER PHE GLU SEQRES 9 D 427 LEU GLU LYS THR ILE LYS GLU LEU HIS GLU VAL VAL GLY SEQRES 10 D 427 ASN ALA ALA ALA LYS ASP ARG TYR ILE VAL PHE GLY VAL SEQRES 11 D 427 GLY VAL THR GLN LEU ILE HIS GLY LEU VAL ILE SER LEU SEQRES 12 D 427 SER PRO ASN MET THR ALA THR PRO ASP ALA PRO GLU SER SEQRES 13 D 427 LYS VAL VAL ALA HIS ALA PRO PHE TYR PRO VAL PHE ARG SEQRES 14 D 427 GLU GLN THR LYS TYR PHE ASP LYS LYS GLY TYR VAL TRP SEQRES 15 D 427 ALA GLY ASN ALA ALA ASN TYR VAL ASN VAL SER ASN PRO SEQRES 16 D 427 GLU GLN TYR ILE GLU MET VAL THR SER PRO ASN ASN PRO SEQRES 17 D 427 GLU GLY LEU LEU ARG HIS ALA VAL ILE LYS GLY CYS LYS SEQRES 18 D 427 SER ILE TYR ASP MET VAL TYR TYR TRP PRO HIS TYR THR SEQRES 19 D 427 PRO ILE LYS TYR LYS ALA ASP GLU ASP ILE LEU LEU PHE SEQRES 20 D 427 THR MET SER LYS PHE THR GLY HIS SER GLY SER ARG PHE SEQRES 21 D 427 GLY TRP ALA LEU ILE LYS ASP GLU SER VAL TYR ASN ASN SEQRES 22 D 427 LEU LEU ASN TYR MET THR LYS ASN THR GLU GLY THR PRO SEQRES 23 D 427 ARG GLU THR GLN LEU ARG SER LEU LYS VAL LEU LYS GLU SEQRES 24 D 427 VAL VAL ALA MET VAL LYS THR GLN LYS GLY THR MET ARG SEQRES 25 D 427 ASP LEU ASN THR PHE GLY PHE LYS LYS LEU ARG GLU ARG SEQRES 26 D 427 TRP VAL ASN ILE THR ALA LEU LEU ASP GLN SER ASP ARG SEQRES 27 D 427 PHE SER TYR GLN GLU LEU PRO GLN SER GLU TYR CYS ASN SEQRES 28 D 427 TYR PHE ARG ARG MET ARG PRO PRO SER PRO SER TYR ALA SEQRES 29 D 427 TRP VAL LYS CYS GLU TRP GLU GLU ASP LYS ASP CYS TYR SEQRES 30 D 427 GLN THR PHE GLN ASN GLY ARG ILE ASN THR GLN ASN GLY SEQRES 31 D 427 VAL GLY PHE GLU ALA SER SER ARG TYR VAL ARG LEU SER SEQRES 32 D 427 LEU ILE LYS THR GLN ASP ASP PHE ASP GLN LEU MET TYR SEQRES 33 D 427 TYR LEU LYS ASP MET VAL LYS ALA LYS ARG LYS MODRES 2HOX ASN A 146 ASN GLYCOSYLATION SITE MODRES 2HOX ASN A 328 ASN GLYCOSYLATION SITE MODRES 2HOX ASN B 146 ASN GLYCOSYLATION SITE MODRES 2HOX ASN C 146 ASN GLYCOSYLATION SITE MODRES 2HOX ASN C 328 ASN GLYCOSYLATION SITE MODRES 2HOX ASN D 146 ASN GLYCOSYLATION SITE MODRES 2HOX ASN D 328 ASN GLYCOSYLATION SITE MODRES 2HOX ASN A 191 ASN GLYCOSYLATION SITE MODRES 2HOX ASN B 191 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET XYP E 4 9 HET BMA E 5 11 HET FUC E 6 10 HET NAG F 1 14 HET FUC F 2 10 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET FUC G 4 10 HET NAG H 1 14 HET FUC H 2 10 HET NAG H 3 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG A 506 14 HET NAG A 507 14 HET NAG A4500 14 HET CL A5001 1 HET P1T A6001 21 HET NAG B 502 14 HET NAG B 503 14 HET NAG B3500 14 HET CL B5002 1 HET P1T B6002 21 HET NAG C 504 14 HET NAG C 505 14 HET CL C5003 1 HET P1T C6003 21 HET CL D5004 1 HET P1T D6004 21 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM P1T 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY) HETNAM 2 P1T METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 5 NAG 17(C8 H15 N O6) FORMUL 5 BMA 3(C6 H12 O6) FORMUL 5 XYP C5 H10 O5 FORMUL 5 FUC 4(C6 H12 O5) FORMUL 13 CL 4(CL 1-) FORMUL 14 P1T 4(C11 H15 N2 O7 P) FORMUL 26 HOH *2669(H2 O) HELIX 1 1 THR A 5 ASN A 17 1 13 HELIX 2 2 CYS A 20 GLU A 22 5 3 HELIX 3 3 GLY A 66 PHE A 68 5 3 HELIX 4 4 LEU A 69 LYS A 74 1 6 HELIX 5 5 HIS A 76 ALA A 81 1 6 HELIX 6 6 SER A 102 GLY A 117 1 16 HELIX 7 7 VAL A 130 SER A 144 1 15 HELIX 8 8 TYR A 165 PHE A 175 1 11 HELIX 9 9 ALA A 187 VAL A 190 5 4 HELIX 10 10 ASN A 194 GLU A 196 5 3 HELIX 11 11 MET A 249 THR A 253 1 5 HELIX 12 12 HIS A 255 ARG A 259 5 5 HELIX 13 13 ASP A 267 THR A 282 1 16 HELIX 14 14 PRO A 286 LYS A 308 1 23 HELIX 15 15 ASP A 313 ASP A 334 1 22 HELIX 16 16 TRP A 370 LYS A 374 5 5 HELIX 17 17 ASP A 375 GLY A 383 1 9 HELIX 18 18 VAL A 391 GLU A 394 5 4 HELIX 19 19 THR A 407 LYS A 423 1 17 HELIX 20 20 THR B 5 ASN B 17 1 13 HELIX 21 21 GLY B 66 PHE B 68 5 3 HELIX 22 22 LEU B 69 LYS B 74 1 6 HELIX 23 23 HIS B 76 ALA B 81 1 6 HELIX 24 24 SER B 102 GLY B 117 1 16 HELIX 25 25 VAL B 130 SER B 144 1 15 HELIX 26 26 TYR B 165 PHE B 175 1 11 HELIX 27 27 ALA B 187 VAL B 190 5 4 HELIX 28 28 ASN B 194 GLU B 196 5 3 HELIX 29 29 MET B 249 THR B 253 1 5 HELIX 30 30 HIS B 255 ARG B 259 5 5 HELIX 31 31 ASP B 267 THR B 282 1 16 HELIX 32 32 PRO B 286 LYS B 308 1 23 HELIX 33 33 ASP B 313 ASP B 334 1 22 HELIX 34 34 TRP B 370 LYS B 374 5 5 HELIX 35 35 ASP B 375 GLY B 383 1 9 HELIX 36 36 VAL B 391 GLU B 394 5 4 HELIX 37 37 THR B 407 LYS B 423 1 17 HELIX 38 38 THR C 5 ASN C 17 1 13 HELIX 39 39 GLY C 66 PHE C 68 5 3 HELIX 40 40 LEU C 69 LYS C 74 1 6 HELIX 41 41 HIS C 76 ALA C 81 1 6 HELIX 42 42 SER C 102 GLY C 117 1 16 HELIX 43 43 VAL C 130 SER C 144 1 15 HELIX 44 44 TYR C 165 PHE C 175 1 11 HELIX 45 45 ALA C 187 VAL C 190 5 4 HELIX 46 46 ASN C 194 GLU C 196 5 3 HELIX 47 47 MET C 249 THR C 253 1 5 HELIX 48 48 HIS C 255 ARG C 259 5 5 HELIX 49 49 ASP C 267 GLU C 283 1 17 HELIX 50 50 PRO C 286 LYS C 308 1 23 HELIX 51 51 ASP C 313 ASP C 334 1 22 HELIX 52 52 TRP C 370 LYS C 374 5 5 HELIX 53 53 ASP C 375 GLY C 383 1 9 HELIX 54 54 VAL C 391 GLU C 394 5 4 HELIX 55 55 THR C 407 ALA C 424 1 18 HELIX 56 56 THR D 5 ASN D 17 1 13 HELIX 57 57 GLY D 66 PHE D 68 5 3 HELIX 58 58 LEU D 69 GLN D 75 1 7 HELIX 59 59 HIS D 76 ALA D 81 1 6 HELIX 60 60 SER D 102 GLY D 117 1 16 HELIX 61 61 VAL D 130 SER D 144 1 15 HELIX 62 62 TYR D 165 PHE D 175 1 11 HELIX 63 63 ALA D 187 VAL D 190 5 4 HELIX 64 64 ASN D 194 GLU D 196 5 3 HELIX 65 65 MET D 249 THR D 253 1 5 HELIX 66 66 HIS D 255 ARG D 259 5 5 HELIX 67 67 ASP D 267 THR D 282 1 16 HELIX 68 68 PRO D 286 LYS D 308 1 23 HELIX 69 69 ASP D 313 ASP D 334 1 22 HELIX 70 70 TRP D 370 LYS D 374 5 5 HELIX 71 71 ASP D 375 GLY D 383 1 9 HELIX 72 72 VAL D 391 GLU D 394 5 4 HELIX 73 73 THR D 407 LYS D 423 1 17 SHEET 1 A 2 GLY A 24 ARG A 25 0 SHEET 2 A 2 GLU A 40 CYS A 41 -1 O GLU A 40 N ARG A 25 SHEET 1 B 2 ILE A 32 SER A 33 0 SHEET 2 B 2 SER A 36 PRO A 37 -1 O SER A 36 N SER A 33 SHEET 1 C 2 TYR A 45 THR A 46 0 SHEET 2 C 2 GLU A 52 LYS A 53 -1 O GLU A 52 N THR A 46 SHEET 1 D 2 ALA A 59 ASP A 60 0 SHEET 2 D 2 ILE A 385 ASN A 386 1 O ASN A 386 N ALA A 59 SHEET 1 E 2 VAL A 82 VAL A 84 0 SHEET 2 E 2 VAL B 82 VAL B 84 -1 O VAL B 84 N VAL A 82 SHEET 1 F 7 TYR A 125 GLY A 129 0 SHEET 2 F 7 GLY A 261 ILE A 265 -1 O ILE A 265 N TYR A 125 SHEET 3 F 7 ILE A 244 THR A 248 -1 N LEU A 245 O LEU A 264 SHEET 4 F 7 LYS A 221 ASP A 225 1 N TYR A 224 O LEU A 246 SHEET 5 F 7 TYR A 198 THR A 203 1 N VAL A 202 O ILE A 223 SHEET 6 F 7 SER A 156 ALA A 160 1 N VAL A 159 O MET A 201 SHEET 7 F 7 TYR A 180 ASN A 185 1 O ALA A 183 N VAL A 158 SHEET 1 G 4 PHE A 339 SER A 340 0 SHEET 2 G 4 TYR A 363 CYS A 368 -1 O LYS A 367 N SER A 340 SHEET 3 G 4 TYR A 399 SER A 403 -1 O LEU A 402 N ALA A 364 SHEET 4 G 4 GLN A 388 ASN A 389 -1 N GLN A 388 O ARG A 401 SHEET 1 H 2 GLU A 348 CYS A 350 0 SHEET 2 H 2 ARG A 355 ARG A 357 -1 O ARG A 357 N GLU A 348 SHEET 1 I 2 GLY B 24 ARG B 25 0 SHEET 2 I 2 GLU B 40 CYS B 41 -1 O GLU B 40 N ARG B 25 SHEET 1 J 2 ILE B 32 SER B 33 0 SHEET 2 J 2 SER B 36 PRO B 37 -1 O SER B 36 N SER B 33 SHEET 1 K 2 TYR B 45 THR B 46 0 SHEET 2 K 2 GLU B 52 LYS B 53 -1 O GLU B 52 N THR B 46 SHEET 1 L 2 ALA B 59 ASP B 60 0 SHEET 2 L 2 ILE B 385 ASN B 386 1 O ASN B 386 N ALA B 59 SHEET 1 M 7 TYR B 125 GLY B 129 0 SHEET 2 M 7 GLY B 261 ILE B 265 -1 O ILE B 265 N TYR B 125 SHEET 3 M 7 ILE B 244 THR B 248 -1 N PHE B 247 O TRP B 262 SHEET 4 M 7 LYS B 221 ASP B 225 1 N TYR B 224 O LEU B 246 SHEET 5 M 7 TYR B 198 THR B 203 1 N VAL B 202 O ASP B 225 SHEET 6 M 7 SER B 156 ALA B 160 1 N VAL B 159 O MET B 201 SHEET 7 M 7 TYR B 180 ASN B 185 1 O ALA B 183 N VAL B 158 SHEET 1 N 4 PHE B 339 TYR B 341 0 SHEET 2 N 4 TYR B 363 CYS B 368 -1 O LYS B 367 N SER B 340 SHEET 3 N 4 TYR B 399 SER B 403 -1 O LEU B 402 N ALA B 364 SHEET 4 N 4 GLN B 388 ASN B 389 -1 N GLN B 388 O ARG B 401 SHEET 1 O 2 GLU B 348 CYS B 350 0 SHEET 2 O 2 ARG B 355 ARG B 357 -1 O ARG B 355 N CYS B 350 SHEET 1 P 2 GLY C 24 ARG C 25 0 SHEET 2 P 2 GLU C 40 CYS C 41 -1 O GLU C 40 N ARG C 25 SHEET 1 Q 2 ILE C 32 SER C 33 0 SHEET 2 Q 2 SER C 36 PRO C 37 -1 O SER C 36 N SER C 33 SHEET 1 R 2 TYR C 45 THR C 46 0 SHEET 2 R 2 GLU C 52 LYS C 53 -1 O GLU C 52 N THR C 46 SHEET 1 S 2 ALA C 59 ASP C 60 0 SHEET 2 S 2 ILE C 385 ASN C 386 1 O ASN C 386 N ALA C 59 SHEET 1 T 2 VAL C 82 VAL C 84 0 SHEET 2 T 2 VAL D 82 VAL D 84 -1 O VAL D 82 N VAL C 84 SHEET 1 U 7 TYR C 125 GLY C 129 0 SHEET 2 U 7 GLY C 261 ILE C 265 -1 O ILE C 265 N TYR C 125 SHEET 3 U 7 ILE C 244 THR C 248 -1 N PHE C 247 O TRP C 262 SHEET 4 U 7 LYS C 221 ASP C 225 1 N TYR C 224 O LEU C 246 SHEET 5 U 7 TYR C 198 THR C 203 1 N VAL C 202 O ILE C 223 SHEET 6 U 7 SER C 156 ALA C 160 1 N VAL C 159 O MET C 201 SHEET 7 U 7 TYR C 180 ASN C 185 1 O ALA C 183 N VAL C 158 SHEET 1 V 4 PHE C 339 TYR C 341 0 SHEET 2 V 4 TYR C 363 CYS C 368 -1 O LYS C 367 N SER C 340 SHEET 3 V 4 TYR C 399 SER C 403 -1 O LEU C 402 N ALA C 364 SHEET 4 V 4 GLN C 388 ASN C 389 -1 N GLN C 388 O ARG C 401 SHEET 1 W 2 GLU C 348 CYS C 350 0 SHEET 2 W 2 ARG C 355 ARG C 357 -1 O ARG C 357 N GLU C 348 SHEET 1 X 2 GLY D 24 ARG D 25 0 SHEET 2 X 2 GLU D 40 CYS D 41 -1 O GLU D 40 N ARG D 25 SHEET 1 Y 2 ILE D 32 SER D 33 0 SHEET 2 Y 2 SER D 36 PRO D 37 -1 O SER D 36 N SER D 33 SHEET 1 Z 2 TYR D 45 THR D 46 0 SHEET 2 Z 2 GLU D 52 LYS D 53 -1 O GLU D 52 N THR D 46 SHEET 1 AA 2 ALA D 59 ASP D 60 0 SHEET 2 AA 2 ILE D 385 ASN D 386 1 O ASN D 386 N ALA D 59 SHEET 1 AB 7 TYR D 125 GLY D 129 0 SHEET 2 AB 7 GLY D 261 ILE D 265 -1 O ILE D 265 N TYR D 125 SHEET 3 AB 7 ILE D 244 THR D 248 -1 N PHE D 247 O TRP D 262 SHEET 4 AB 7 LYS D 221 ASP D 225 1 N TYR D 224 O LEU D 246 SHEET 5 AB 7 TYR D 198 THR D 203 1 N VAL D 202 O ASP D 225 SHEET 6 AB 7 SER D 156 ALA D 160 1 N VAL D 159 O MET D 201 SHEET 7 AB 7 TYR D 180 ASN D 185 1 O ALA D 183 N VAL D 158 SHEET 1 AC 4 PHE D 339 TYR D 341 0 SHEET 2 AC 4 TYR D 363 CYS D 368 -1 O LYS D 367 N SER D 340 SHEET 3 AC 4 TYR D 399 SER D 403 -1 O LEU D 402 N ALA D 364 SHEET 4 AC 4 GLN D 388 ASN D 389 -1 N GLN D 388 O ARG D 401 SHEET 1 AD 2 GLU D 348 CYS D 350 0 SHEET 2 AD 2 ARG D 355 ARG D 357 -1 O ARG D 357 N GLU D 348 SSBOND 1 CYS A 20 CYS A 39 1555 1555 2.06 SSBOND 2 CYS A 41 CYS A 50 1555 1555 2.09 SSBOND 3 CYS A 44 CYS A 57 1555 1555 2.07 SSBOND 4 CYS A 368 CYS A 376 1555 1555 2.12 SSBOND 5 CYS B 20 CYS B 39 1555 1555 2.09 SSBOND 6 CYS B 41 CYS B 50 1555 1555 2.14 SSBOND 7 CYS B 44 CYS B 57 1555 1555 2.07 SSBOND 8 CYS B 368 CYS B 376 1555 1555 2.11 SSBOND 9 CYS C 20 CYS C 39 1555 1555 2.07 SSBOND 10 CYS C 41 CYS C 50 1555 1555 2.07 SSBOND 11 CYS C 44 CYS C 57 1555 1555 2.06 SSBOND 12 CYS C 368 CYS C 376 1555 1555 2.12 SSBOND 13 CYS D 20 CYS D 39 1555 1555 2.07 SSBOND 14 CYS D 41 CYS D 50 1555 1555 2.07 SSBOND 15 CYS D 44 CYS D 57 1555 1555 2.07 SSBOND 16 CYS D 368 CYS D 376 1555 1555 2.13 LINK ND2 ASN A 146 C1 NAG E 1 1555 1555 1.47 LINK ND2 ASN A 191 C1 NAG A4500 1555 1555 1.45 LINK ND2 ASN A 328 C1 NAG A 506 1555 1555 1.44 LINK ND2 ASN B 146 C1 NAG F 1 1555 1555 1.46 LINK ND2 ASN B 191 C1 NAG B3500 1555 1555 1.45 LINK ND2 ASN C 146 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN C 328 C1 NAG C 504 1555 1555 1.44 LINK ND2 ASN D 146 C1 NAG H 1 1555 1555 1.46 LINK ND2 ASN D 328 C1 NAG I 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.42 LINK O3 NAG E 1 C1 FUC E 6 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.43 LINK O2 BMA E 3 C1 XYP E 4 1555 1555 1.44 LINK O3 BMA E 3 C1 BMA E 5 1555 1555 1.40 LINK O3 NAG F 1 C1 FUC F 2 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O3 NAG G 1 C1 FUC G 4 1555 1555 1.46 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.46 LINK O3 NAG H 1 C1 FUC H 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 3 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 CISPEP 1 ASN A 95 PRO A 96 0 1.30 CISPEP 2 ALA A 162 PRO A 163 0 5.28 CISPEP 3 SER A 204 PRO A 205 0 -6.66 CISPEP 4 ASN A 207 PRO A 208 0 22.73 CISPEP 5 ASN B 95 PRO B 96 0 4.46 CISPEP 6 ALA B 162 PRO B 163 0 2.76 CISPEP 7 SER B 204 PRO B 205 0 -6.43 CISPEP 8 ASN B 207 PRO B 208 0 20.99 CISPEP 9 ASN C 95 PRO C 96 0 2.19 CISPEP 10 ALA C 162 PRO C 163 0 1.05 CISPEP 11 SER C 204 PRO C 205 0 -7.58 CISPEP 12 ASN C 207 PRO C 208 0 21.00 CISPEP 13 ASN D 95 PRO D 96 0 2.63 CISPEP 14 ALA D 162 PRO D 163 0 2.97 CISPEP 15 SER D 204 PRO D 205 0 -5.99 CISPEP 16 ASN D 207 PRO D 208 0 22.00 CRYST1 67.665 126.892 102.664 90.00 97.30 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014779 0.000000 0.001893 0.00000 SCALE2 0.000000 0.007881 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009820 0.00000