HEADER METAL TRANSPORT 17-JUL-06 2HPU TITLE SOLUTION NMR STRUCTURE OF THE APO-NOSL PROTEIN FROM ACHROMOBACTER TITLE 2 CYCLOCLASTES COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOSL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACHROMOBACTER CYCLOCLASTES; SOURCE 3 ORGANISM_TAXID: 223; SOURCE 4 STRAIN: IAM1013; SOURCE 5 GENE: NOSL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-20B+ KEYWDS ALPHA BETA TOPOLOGY, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.M.TAUBNER,M.A.MCGUIRL,D.M.DOOLEY,V.COPIE REVDAT 4 29-MAY-24 2HPU 1 REMARK REVDAT 3 09-MAR-22 2HPU 1 REMARK SEQADV REVDAT 2 24-FEB-09 2HPU 1 VERSN REVDAT 1 24-OCT-06 2HPU 0 JRNL AUTH L.M.TAUBNER,M.A.MCGUIRL,D.M.DOOLEY,V.COPIE JRNL TITL STRUCTURAL STUDIES OF APO NOSL, AN ACCESSORY PROTEIN OF THE JRNL TITL 2 NITROUS OXIDE REDUCTASE SYSTEM: INSIGHTS FROM STRUCTURAL JRNL TITL 3 HOMOLOGY WITH MERB, A MERCURY RESISTANCE PROTEIN. JRNL REF BIOCHEMISTRY V. 45 12240 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 17014077 JRNL DOI 10.1021/BI061089+ REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.1, CNS 1.1 REMARK 3 AUTHORS : BRUKER INC. (XWINNMR), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES,PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2HPU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038618. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100MM SODIUM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM NOSL, U-15N, 13C; 100MM REMARK 210 SODIUM PHOSPHATE; 1MM EDTA; 1MM REMARK 210 DTT; 90% H2O, 10% D2O; 1.0 MM REMARK 210 NOSL, U-15N; 100MM SODIUM REMARK 210 PHOSPHATE; 1MM EDTA; 1MM DTT; 95% REMARK 210 H2O, 5% D2O; 1.0 MM NOSL, U-15N, REMARK 210 13C; 100MM SODIUM PHOSPHATE; REMARK 210 1MM EDTA; 1MM DTT; > 95% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNCA; HNCO; HNCACB; CBCA(CO)NH; REMARK 210 C(CO)NH; HCC(CO)NH; 1H-13C-CT REMARK 210 HSQC; HCCH-TOCSY; 3D 15N NOESY; REMARK 210 15N NOESY-HSQC; 13C NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.4, NMRVIEW 5.0, ARIA REMARK 210 1.2 REMARK 210 METHOD USED : AMBIGUOUS RESTRAINTS FOR REMARK 210 ITERATIVE ASSIGNMENT (ARIA 1.2), REMARK 210 TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH ACCEPTABLE REMARK 210 COVALENT GEOMETRY,STRUCTURES REMARK 210 WITH FAVORABLE NON-BOND ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SEQUENTIAL AND INTRA-RESIDUE 1H, 15N, AND 13C BACKBONE AND REMARK 210 SIDE-CHAIN CHEMICAL SHIFT ASSIGNMENTS WERE EXTRACTED FROM A REMARK 210 SERIES OF DOUBLE AND TRIPLE RESONANCE NMR EXPERIMENTS (HNCA, REMARK 210 HNCO, HNCACB, CBCA(CO)NH, C(CO)NH, HCC(CO)NH, 1H-13C-CT HSQC,AND REMARK 210 HCCH-TOCSY) CONDUCTED ON A DRX600. NOE DATA WERE OBTAINED FROM REMARK 210 3D 15N NOESY EXPERIMENTS WITH MIXING TIMES (TMIX) OF 100, 120, REMARK 210 AND 140 MSEC AND FROM 3D HCHC-NOESY (TMIX=140 MSEC) SPECTRA REMARK 210 ACQUIRED AT 600 MHZ. ADDITIONAL 15N NOESY-HSQC AND 13C NOESY- REMARK 210 HSQC EXPERIMENTS (NOE MIXING TIMES OF 120 MSEC) WERE ACQUIRED ON REMARK 210 A VARIAN 800 INOVA (800 MHZ) INSTRUMENT. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 LYS A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 GLN A 8 REMARK 465 SER A 9 REMARK 465 ILE A 10 REMARK 465 VAL A 11 REMARK 465 PRO A 12 REMARK 465 GLN A 13 REMARK 465 ASP A 14 REMARK 465 MET A 15 REMARK 465 THR A 16 REMARK 465 PRO A 17 REMARK 465 GLU A 18 REMARK 465 THR A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 HIS A 22 REMARK 465 TYR A 23 REMARK 465 CYS A 24 REMARK 465 GLN A 25 REMARK 465 MET A 26 REMARK 465 ASN A 27 REMARK 465 LEU A 28 REMARK 465 LEU A 29 REMARK 465 GLU A 30 REMARK 465 HIS A 31 REMARK 465 PRO A 32 REMARK 465 GLY A 33 REMARK 465 PRO A 34 REMARK 465 ASP A 161 REMARK 465 TYR A 162 REMARK 465 LEU A 163 REMARK 465 GLY A 164 REMARK 465 ARG A 165 REMARK 465 LEU A 166 REMARK 465 ARG A 167 REMARK 465 ALA A 168 REMARK 465 LEU A 169 REMARK 465 PRO A 170 REMARK 465 HIS A 171 REMARK 465 PRO A 172 REMARK 465 ALA A 173 REMARK 465 GLY A 174 REMARK 465 GLY A 175 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG21 ILE A 92 HB2 SER A 118 1.27 REMARK 500 HD1 PHE A 117 H SER A 119 1.28 REMARK 500 HG22 THR A 141 HA ARG A 156 1.30 REMARK 500 OD2 ASP A 95 HZ1 LYS A 96 1.53 REMARK 500 OD1 ASP A 139 HH21 ARG A 156 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 62 0.32 -55.65 REMARK 500 1 ASP A 75 104.67 -54.63 REMARK 500 1 MET A 76 52.55 -144.61 REMARK 500 1 ALA A 78 -84.36 67.12 REMARK 500 1 ALA A 81 -154.79 -95.02 REMARK 500 1 GLN A 85 150.13 71.74 REMARK 500 1 ARG A 106 175.32 172.82 REMARK 500 1 GLU A 130 -34.58 -159.07 REMARK 500 1 VAL A 149 -72.42 -127.56 REMARK 500 1 GLU A 150 -77.03 165.20 REMARK 500 1 THR A 151 28.99 46.18 REMARK 500 1 PRO A 155 -136.81 -73.12 REMARK 500 1 ALA A 157 20.72 -179.49 REMARK 500 1 ASP A 158 70.52 48.49 REMARK 500 1 ASP A 159 -42.18 -145.14 REMARK 500 2 PRO A 62 22.43 -68.35 REMARK 500 2 ILE A 65 -38.66 72.74 REMARK 500 2 ALA A 78 -45.16 83.47 REMARK 500 2 GLN A 85 140.22 68.74 REMARK 500 2 PRO A 86 31.71 -85.14 REMARK 500 2 ARG A 106 -80.77 -175.06 REMARK 500 2 GLU A 130 -82.94 -165.55 REMARK 500 2 ARG A 156 -39.71 -155.13 REMARK 500 2 ALA A 157 53.89 179.33 REMARK 500 2 ASP A 158 -144.90 63.38 REMARK 500 3 PRO A 62 -7.60 -59.81 REMARK 500 3 ASP A 75 109.21 -56.24 REMARK 500 3 ALA A 78 -50.85 67.42 REMARK 500 3 GLN A 85 171.49 63.76 REMARK 500 3 ARG A 106 -53.37 -176.58 REMARK 500 3 GLU A 130 -80.05 -156.58 REMARK 500 3 VAL A 149 -71.79 -119.73 REMARK 500 3 GLU A 150 -76.37 172.28 REMARK 500 3 THR A 151 -31.17 64.35 REMARK 500 3 PRO A 155 -85.22 -73.85 REMARK 500 3 ALA A 157 -162.90 165.73 REMARK 500 3 ASP A 159 -83.81 -66.26 REMARK 500 4 GLU A 63 -89.21 57.21 REMARK 500 4 GLN A 64 -59.23 -178.97 REMARK 500 4 ILE A 65 -40.61 -165.87 REMARK 500 4 ASP A 75 108.53 -57.00 REMARK 500 4 MET A 76 62.02 -161.12 REMARK 500 4 ALA A 78 97.47 -57.44 REMARK 500 4 GLN A 85 157.36 66.59 REMARK 500 4 ARG A 105 -107.90 -121.41 REMARK 500 4 ARG A 106 -60.66 68.26 REMARK 500 4 GLU A 130 -86.77 -145.96 REMARK 500 4 GLU A 150 -81.77 66.58 REMARK 500 4 THR A 151 -59.99 43.31 REMARK 500 4 PRO A 155 -89.07 -81.21 REMARK 500 REMARK 500 THIS ENTRY HAS 257 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5595 RELATED DB: BMRB REMARK 900 NMR CHEMICAL SHIFT ASSIGNMENTS REMARK 900 RELATED ID: 2HQ3 RELATED DB: PDB REMARK 900 SOLUTION NMR STRUCTURE OF THE APO-NOSL PROTEIN FROM ACHROMOBACTER REMARK 900 CYCLOCLASTES DBREF 2HPU A 3 175 UNP O68481 O68481_ACHCY 21 193 SEQADV 2HPU MET A 1 UNP O68481 CLONING ARTIFACT SEQADV 2HPU ASP A 2 UNP O68481 CLONING ARTIFACT SEQRES 1 A 175 MET ASP LYS GLU ASP VAL ALA GLN SER ILE VAL PRO GLN SEQRES 2 A 175 ASP MET THR PRO GLU THR LEU GLY HIS TYR CYS GLN MET SEQRES 3 A 175 ASN LEU LEU GLU HIS PRO GLY PRO LYS ALA GLN ILE PHE SEQRES 4 A 175 LEU GLU GLY SER PRO ALA PRO LEU PHE PHE SER GLN VAL SEQRES 5 A 175 ARG ASP ALA ILE ALA TYR ALA ARG GLY PRO GLU GLN ILE SEQRES 6 A 175 ALA PRO ILE LEU VAL ILE TYR VAL ASN ASP MET GLY ALA SEQRES 7 A 175 ALA GLY ALA THR TRP ASP GLN PRO GLY ASP GLY ASN TRP SEQRES 8 A 175 ILE ALA ALA ASP LYS ALA PHE TYR VAL VAL GLY SER ALA SEQRES 9 A 175 ARG ARG GLY GLY MET GLY ALA PRO GLU ALA VAL PRO PHE SEQRES 10 A 175 SER SER ARG ASP GLU ALA ALA ALA PHE VAL LEU ALA GLU SEQRES 11 A 175 GLY GLY GLN VAL LEU ALA LEU ALA ASP ILE THR ASP ALA SEQRES 12 A 175 MET VAL LEU THR PRO VAL GLU THR GLY SER GLU PRO ARG SEQRES 13 A 175 ALA ASP ASP GLU ASP TYR LEU GLY ARG LEU ARG ALA LEU SEQRES 14 A 175 PRO HIS PRO ALA GLY GLY HELIX 1 1 GLN A 51 ARG A 60 1 10 HELIX 2 2 GLY A 61 ALA A 66 5 6 HELIX 3 3 ALA A 93 LYS A 96 5 4 HELIX 4 4 SER A 119 GLU A 130 1 12 HELIX 5 5 ALA A 138 ILE A 140 5 3 HELIX 6 6 THR A 141 LEU A 146 1 6 SHEET 1 A 4 PRO A 46 PHE A 49 0 SHEET 2 A 4 ALA A 36 LEU A 40 -1 N ALA A 36 O PHE A 49 SHEET 3 A 4 ILE A 68 ASP A 75 -1 O VAL A 70 N PHE A 39 SHEET 4 A 4 ASN A 90 ILE A 92 -1 O ILE A 92 N VAL A 73 SHEET 1 B 3 ALA A 114 PHE A 117 0 SHEET 2 B 3 PHE A 98 GLY A 102 -1 N PHE A 98 O PHE A 117 SHEET 3 B 3 GLY A 131 ALA A 136 -1 O LEU A 135 N TYR A 99 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1