HEADER HYDROLASE 24-JUL-06 2HSZ TITLE CRYSTAL STRUCTURE OF A PREDICTED PHOSPHOGLYCOLATE PHOSPHATASE TITLE 2 (HS_0176) FROM HAEMOPHILUS SOMNUS 129PT AT 1.90 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOVEL PREDICTED PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS SOMNUS 129PT; SOURCE 3 ORGANISM_TAXID: 205914; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-OCT-17 2HSZ 1 REMARK REVDAT 5 18-OCT-17 2HSZ 1 REMARK REVDAT 4 13-JUL-11 2HSZ 1 VERSN REVDAT 3 23-MAR-11 2HSZ 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2HSZ 1 VERSN REVDAT 1 15-AUG-06 2HSZ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF NOVEL PREDICTED PHOSPHATASE FROM JRNL TITL 2 HAEMOPHILUS SOMNUS 129PT AT 1.90 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 51362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2613 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3476 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 179 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3517 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 334 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.18000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.066 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3660 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2406 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4988 ; 1.495 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5916 ; 0.948 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 5.775 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;44.888 ;25.422 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 586 ;12.907 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;14.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 547 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4126 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 730 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 773 ; 0.246 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2355 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1818 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1734 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 281 ; 0.166 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.115 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.256 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.190 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2352 ; 2.090 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 916 ; 0.651 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3656 ; 2.831 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1542 ; 4.610 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1326 ; 6.555 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 224 4 REMARK 3 1 B 1 B 224 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2896 ; 0.180 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2896 ; 0.930 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7467 77.6616 17.4957 REMARK 3 T TENSOR REMARK 3 T11: -0.0354 T22: -0.0682 REMARK 3 T33: -0.0684 T12: 0.0292 REMARK 3 T13: -0.0259 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.7797 L22: 1.1129 REMARK 3 L33: 1.2728 L12: -0.0472 REMARK 3 L13: 0.1178 L23: 0.2291 REMARK 3 S TENSOR REMARK 3 S11: -0.1011 S12: -0.0611 S13: 0.0582 REMARK 3 S21: 0.0606 S22: 0.0149 S23: 0.0516 REMARK 3 S31: -0.1924 S32: 0.0195 S33: 0.0862 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 224 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5685 42.8474 -11.8062 REMARK 3 T TENSOR REMARK 3 T11: -0.0730 T22: -0.0386 REMARK 3 T33: -0.0531 T12: -0.0292 REMARK 3 T13: -0.0095 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.2688 L22: 2.0502 REMARK 3 L33: 0.7795 L12: 0.4212 REMARK 3 L13: 0.0909 L23: 0.5264 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.0018 S13: 0.0176 REMARK 3 S21: -0.1479 S22: -0.0264 S23: 0.0897 REMARK 3 S31: -0.0298 S32: -0.0604 S33: 0.0645 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 (1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 (2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO REMARK 3 PARTIAL S-MET INCORPORATION. REMARK 3 (3). THERE ARE UNKNOWN DENSITY NEAR ACTIVE SITE IN A AND B CHAINS. REMARK 3 THEY ARE NAMED AS UNL. REMARK 3 (4). THERE ARE UNKNOWN DENSITY NEAR REMARK 3 PHE 75 IN A AND B MOLECULES, TYR 77 AND PHE 138 IN A MOLECULE, REMARK 3 PRO 152 AND TYR 200 IN B MOLECULE. THEY ARE ALL IN THE SOLVENT REMARK 3 REGION AND LEFT UNMODELED. (5). ATOM RECORDS CONTAIN RESIDUAL REMARK 3 B FACTORS ONLY. REMARK 4 REMARK 4 2HSZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97925,1.28281,0.97914 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.897 REMARK 200 RESOLUTION RANGE LOW (A) : 29.988 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.65300 REMARK 200 R SYM FOR SHELL (I) : 0.65300 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NAACETATE, 20.0% PEG-3350, NO REMARK 280 BUFFER PH 7.9, VAPOR DIFFUSION, SITTING DROP, NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.80850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.21800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.80850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.21800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 REMARK 300 BIOMOLECULE: 1,2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY DATA SUPPORTS THE REMARK 300 ASSIGNMENT OF A MONOMER AS A BIOLOGICALLY SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 24 CD1 CD2 REMARK 470 LYS A 31 NZ REMARK 470 LYS A 64 CD CE NZ REMARK 470 LYS A 68 NZ REMARK 470 GLU A 69 OE1 OE2 REMARK 470 LYS A 208 CE NZ REMARK 470 GLN A 224 CG CD OE1 NE2 REMARK 470 LEU B 24 CD1 CD2 REMARK 470 LYS B 31 NZ REMARK 470 GLU B 102 CD OE1 OE2 REMARK 470 LYS B 108 NZ REMARK 470 LYS B 123 NZ REMARK 470 LYS B 208 CE NZ REMARK 470 GLN B 224 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 215 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG B 57 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 11 -77.65 -107.12 REMARK 500 THR A 14 -58.61 -121.51 REMARK 500 CYS A 91 55.88 -140.77 REMARK 500 ASN A 92 -75.97 -99.17 REMARK 500 ASN A 199 42.72 -140.23 REMARK 500 LEU B 11 -72.76 -106.04 REMARK 500 THR B 14 -57.90 -123.04 REMARK 500 CYS B 91 34.23 -140.94 REMARK 500 ASN B 199 44.58 -140.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL B 227 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 366906 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SUITABLE DATABASE REFERENCE WAS NOT AVAILABLE AT THE REMARK 999 TIME OF PROCESSING. DBREF 2HSZ A 1 224 UNP Q0I1W8 Q0I1W8_HAES1 1 224 DBREF 2HSZ B 1 224 UNP Q0I1W8 Q0I1W8_HAES1 1 224 SEQRES 1 A 243 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 243 ASN LEU TYR PHE GLN GLY MSE THR GLN PHE LYS LEU ILE SEQRES 3 A 243 GLY PHE ASP LEU ASP GLY THR LEU VAL ASN SER LEU PRO SEQRES 4 A 243 ASP LEU ALA LEU SER ILE ASN SER ALA LEU LYS ASP VAL SEQRES 5 A 243 ASN LEU PRO GLN ALA SER GLU ASN LEU VAL MSE THR TRP SEQRES 6 A 243 ILE GLY ASN GLY ALA ASP VAL LEU SER GLN ARG ALA VAL SEQRES 7 A 243 ASP TRP ALA CYS LYS GLN ALA GLU LYS GLU LEU THR GLU SEQRES 8 A 243 ASP GLU PHE LYS TYR PHE LYS ARG GLN PHE GLY PHE TYR SEQRES 9 A 243 TYR GLY GLU ASN LEU CYS ASN ILE SER ARG LEU TYR PRO SEQRES 10 A 243 ASN VAL LYS GLU THR LEU GLU ALA LEU LYS ALA GLN GLY SEQRES 11 A 243 TYR ILE LEU ALA VAL VAL THR ASN LYS PRO THR LYS HIS SEQRES 12 A 243 VAL GLN PRO ILE LEU THR ALA PHE GLY ILE ASP HIS LEU SEQRES 13 A 243 PHE SER GLU MSE LEU GLY GLY GLN SER LEU PRO GLU ILE SEQRES 14 A 243 LYS PRO HIS PRO ALA PRO PHE TYR TYR LEU CYS GLY LYS SEQRES 15 A 243 PHE GLY LEU TYR PRO LYS GLN ILE LEU PHE VAL GLY ASP SEQRES 16 A 243 SER GLN ASN ASP ILE PHE ALA ALA HIS SER ALA GLY CYS SEQRES 17 A 243 ALA VAL VAL GLY LEU THR TYR GLY TYR ASN TYR ASN ILE SEQRES 18 A 243 PRO ILE ALA GLN SER LYS PRO ASP TRP ILE PHE ASP ASP SEQRES 19 A 243 PHE ALA ASP ILE LEU LYS ILE THR GLN SEQRES 1 B 243 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 243 ASN LEU TYR PHE GLN GLY MSE THR GLN PHE LYS LEU ILE SEQRES 3 B 243 GLY PHE ASP LEU ASP GLY THR LEU VAL ASN SER LEU PRO SEQRES 4 B 243 ASP LEU ALA LEU SER ILE ASN SER ALA LEU LYS ASP VAL SEQRES 5 B 243 ASN LEU PRO GLN ALA SER GLU ASN LEU VAL MSE THR TRP SEQRES 6 B 243 ILE GLY ASN GLY ALA ASP VAL LEU SER GLN ARG ALA VAL SEQRES 7 B 243 ASP TRP ALA CYS LYS GLN ALA GLU LYS GLU LEU THR GLU SEQRES 8 B 243 ASP GLU PHE LYS TYR PHE LYS ARG GLN PHE GLY PHE TYR SEQRES 9 B 243 TYR GLY GLU ASN LEU CYS ASN ILE SER ARG LEU TYR PRO SEQRES 10 B 243 ASN VAL LYS GLU THR LEU GLU ALA LEU LYS ALA GLN GLY SEQRES 11 B 243 TYR ILE LEU ALA VAL VAL THR ASN LYS PRO THR LYS HIS SEQRES 12 B 243 VAL GLN PRO ILE LEU THR ALA PHE GLY ILE ASP HIS LEU SEQRES 13 B 243 PHE SER GLU MSE LEU GLY GLY GLN SER LEU PRO GLU ILE SEQRES 14 B 243 LYS PRO HIS PRO ALA PRO PHE TYR TYR LEU CYS GLY LYS SEQRES 15 B 243 PHE GLY LEU TYR PRO LYS GLN ILE LEU PHE VAL GLY ASP SEQRES 16 B 243 SER GLN ASN ASP ILE PHE ALA ALA HIS SER ALA GLY CYS SEQRES 17 B 243 ALA VAL VAL GLY LEU THR TYR GLY TYR ASN TYR ASN ILE SEQRES 18 B 243 PRO ILE ALA GLN SER LYS PRO ASP TRP ILE PHE ASP ASP SEQRES 19 B 243 PHE ALA ASP ILE LEU LYS ILE THR GLN MODRES 2HSZ MSE A 1 MET SELENOMETHIONINE MODRES 2HSZ MSE A 44 MET SELENOMETHIONINE MODRES 2HSZ MSE A 141 MET SELENOMETHIONINE MODRES 2HSZ MSE B 1 MET SELENOMETHIONINE MODRES 2HSZ MSE B 44 MET SELENOMETHIONINE MODRES 2HSZ MSE B 141 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 44 8 HET MSE A 141 8 HET MSE B 1 8 HET MSE B 44 8 HET MSE B 141 8 HET ACT A 225 4 HET CL A 226 1 HET UNL A 227 11 HET ACT B 225 4 HET CL B 226 1 HET UNL B 227 9 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION HETNAM UNL UNKNOWN LIGAND FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 4 CL 2(CL 1-) FORMUL 9 HOH *334(H2 O) HELIX 1 1 SER A 18 VAL A 33 1 16 HELIX 2 2 SER A 39 ILE A 47 1 9 HELIX 3 3 GLY A 50 GLU A 67 1 18 HELIX 4 4 THR A 71 LEU A 90 1 20 HELIX 5 5 ASN A 99 GLN A 110 1 12 HELIX 6 6 PRO A 121 PHE A 132 1 12 HELIX 7 7 ILE A 134 PHE A 138 5 5 HELIX 8 8 PRO A 154 GLY A 165 1 12 HELIX 9 9 TYR A 167 LYS A 169 5 3 HELIX 10 10 SER A 177 GLY A 188 1 12 HELIX 11 11 PRO A 203 LYS A 208 5 6 HELIX 12 12 ASP A 215 THR A 223 5 9 HELIX 13 13 SER B 18 VAL B 33 1 16 HELIX 14 14 SER B 39 THR B 45 1 7 HELIX 15 15 GLY B 50 GLU B 67 1 18 HELIX 16 16 THR B 71 LEU B 90 1 20 HELIX 17 17 ASN B 99 GLN B 110 1 12 HELIX 18 18 PRO B 121 LYS B 123 5 3 HELIX 19 19 HIS B 124 PHE B 132 1 9 HELIX 20 20 ILE B 134 PHE B 138 5 5 HELIX 21 21 PRO B 154 GLY B 165 1 12 HELIX 22 22 TYR B 167 LYS B 169 5 3 HELIX 23 23 SER B 177 GLY B 188 1 12 HELIX 24 24 PRO B 203 LYS B 208 5 6 HELIX 25 25 ASP B 215 THR B 223 5 9 SHEET 1 A 6 GLU A 140 LEU A 142 0 SHEET 2 A 6 ILE A 113 VAL A 117 1 N VAL A 116 O LEU A 142 SHEET 3 A 6 LEU A 6 PHE A 9 1 N ILE A 7 O ILE A 113 SHEET 4 A 6 ILE A 171 GLY A 175 1 O LEU A 172 N GLY A 8 SHEET 5 A 6 ALA A 190 LEU A 194 1 O VAL A 192 N PHE A 173 SHEET 6 A 6 TRP A 211 PHE A 213 1 O TRP A 211 N GLY A 193 SHEET 1 B 2 VAL A 16 ASN A 17 0 SHEET 2 B 2 ARG A 95 LEU A 96 -1 O ARG A 95 N ASN A 17 SHEET 1 C 6 GLU B 140 LEU B 142 0 SHEET 2 C 6 ILE B 113 VAL B 117 1 N VAL B 116 O LEU B 142 SHEET 3 C 6 LEU B 6 PHE B 9 1 N ILE B 7 O ILE B 113 SHEET 4 C 6 ILE B 171 GLY B 175 1 O LEU B 172 N GLY B 8 SHEET 5 C 6 ALA B 190 LEU B 194 1 O VAL B 192 N PHE B 173 SHEET 6 C 6 TRP B 211 PHE B 213 1 O TRP B 211 N GLY B 193 SHEET 1 D 2 VAL B 16 ASN B 17 0 SHEET 2 D 2 ARG B 95 LEU B 96 -1 O ARG B 95 N ASN B 17 LINK C GLY A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N THR A 2 1555 1555 1.34 LINK C VAL A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N THR A 45 1555 1555 1.34 LINK C GLU A 140 N MSE A 141 1555 1555 1.33 LINK C MSE A 141 N LEU A 142 1555 1555 1.32 LINK C GLY B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N THR B 2 1555 1555 1.34 LINK C VAL B 43 N MSE B 44 1555 1555 1.34 LINK C MSE B 44 N THR B 45 1555 1555 1.34 LINK C GLU B 140 N MSE B 141 1555 1555 1.34 LINK C MSE B 141 N LEU B 142 1555 1555 1.33 CISPEP 1 LYS A 151 PRO A 152 0 8.84 CISPEP 2 LYS B 151 PRO B 152 0 9.94 SITE 1 AC1 3 GLY A 0 GLN A 110 HOH A 288 SITE 1 AC2 5 GLY A 48 ASN A 49 GLY A 50 UNL A 227 SITE 2 AC2 5 HOH A 281 SITE 1 AC3 2 PHE B 4 GLN B 110 SITE 1 AC4 5 GLY B 48 ASN B 49 GLY B 50 UNL B 227 SITE 2 AC4 5 HOH B 285 SITE 1 AC5 10 LEU A 22 ALA A 51 ASP A 52 PHE A 82 SITE 2 AC5 10 TYR A 86 LYS A 120 PRO A 121 LYS A 123 SITE 3 AC5 10 HIS A 124 CL A 226 SITE 1 AC6 9 LEU B 22 ALA B 51 PHE B 82 TYR B 86 SITE 2 AC6 9 LYS B 120 PRO B 121 LYS B 123 HIS B 124 SITE 3 AC6 9 CL B 226 CRYST1 81.617 118.436 66.503 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012250 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008440 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015040 0.00000