data_2HX0 # _entry.id 2HX0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HX0 pdb_00002hx0 10.2210/pdb2hx0/pdb RCSB RCSB038858 ? ? WWPDB D_1000038858 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ScR59 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HX0 _pdbx_database_status.recvd_initial_deposition_date 2006-08-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.P.' 1 'Abashidze, M.' 2 'Seetharaman, J.' 3 'Shastry, R.' 4 'Conover, K.' 5 'Ma, L.C.' 6 'Xiao, R.' 7 'Liu, J.' 8 'Baran, M.C.' 9 'Acton, T.B.' 10 'Rost, B.' 11 'Montelione, G.' 12 'Tong, L.' 13 'Hunt, J.F.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title ;Three-dimensional structure of the hypothetical protein from Salmonella cholerae-suis (aka Salmonella enterica) at the resolution 1.55 A. Northeast Structural Genomics target ScR59. ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuzin, A.P.' 1 ? primary 'Abashidze, M.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Shastry, R.' 4 ? primary 'Conover, K.' 5 ? primary 'Ma, L.C.' 6 ? primary 'Xiao, R.' 7 ? primary 'Liu, J.' 8 ? primary 'Baran, M.C.' 9 ? primary 'Acton, T.B.' 10 ? primary 'Rost, B.' 11 ? primary 'Montelione, G.' 12 ? primary 'Tong, L.' 13 ? primary 'Hunt, J.F.' 14 ? primary 'Northeast Structural Genomics Consortium (NESG)' 15 ? # _cell.entry_id 2HX0 _cell.length_a 78.759 _cell.length_b 78.759 _cell.length_c 45.926 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HX0 _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative DNA-binding protein' 16946.355 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 119 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)AGDPNS(MSE)TVSHHNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSL TGTFEVISLNGTLELTGEHLHLAVSDPYGV(MSE)LGGH(MSE)(MSE)PGCTVRTTLELVIGELPALTFSRQPCAISGY DELHISSRLEHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MAGDPNSMTVSHHNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVIS LNGTLELTGEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSRLEHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ScR59 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 GLY n 1 4 ASP n 1 5 PRO n 1 6 ASN n 1 7 SER n 1 8 MSE n 1 9 THR n 1 10 VAL n 1 11 SER n 1 12 HIS n 1 13 HIS n 1 14 ASN n 1 15 ALA n 1 16 SER n 1 17 THR n 1 18 ALA n 1 19 ARG n 1 20 PHE n 1 21 TYR n 1 22 ALA n 1 23 LEU n 1 24 ARG n 1 25 LEU n 1 26 LEU n 1 27 PRO n 1 28 GLY n 1 29 GLN n 1 30 GLU n 1 31 VAL n 1 32 PHE n 1 33 SER n 1 34 GLN n 1 35 LEU n 1 36 HIS n 1 37 ALA n 1 38 PHE n 1 39 VAL n 1 40 GLN n 1 41 GLN n 1 42 ASN n 1 43 GLN n 1 44 LEU n 1 45 ARG n 1 46 ALA n 1 47 ALA n 1 48 TRP n 1 49 ILE n 1 50 ALA n 1 51 GLY n 1 52 CYS n 1 53 THR n 1 54 GLY n 1 55 SER n 1 56 LEU n 1 57 THR n 1 58 ASP n 1 59 VAL n 1 60 ALA n 1 61 LEU n 1 62 ARG n 1 63 TYR n 1 64 ALA n 1 65 GLY n 1 66 GLN n 1 67 GLU n 1 68 ALA n 1 69 THR n 1 70 THR n 1 71 SER n 1 72 LEU n 1 73 THR n 1 74 GLY n 1 75 THR n 1 76 PHE n 1 77 GLU n 1 78 VAL n 1 79 ILE n 1 80 SER n 1 81 LEU n 1 82 ASN n 1 83 GLY n 1 84 THR n 1 85 LEU n 1 86 GLU n 1 87 LEU n 1 88 THR n 1 89 GLY n 1 90 GLU n 1 91 HIS n 1 92 LEU n 1 93 HIS n 1 94 LEU n 1 95 ALA n 1 96 VAL n 1 97 SER n 1 98 ASP n 1 99 PRO n 1 100 TYR n 1 101 GLY n 1 102 VAL n 1 103 MSE n 1 104 LEU n 1 105 GLY n 1 106 GLY n 1 107 HIS n 1 108 MSE n 1 109 MSE n 1 110 PRO n 1 111 GLY n 1 112 CYS n 1 113 THR n 1 114 VAL n 1 115 ARG n 1 116 THR n 1 117 THR n 1 118 LEU n 1 119 GLU n 1 120 LEU n 1 121 VAL n 1 122 ILE n 1 123 GLY n 1 124 GLU n 1 125 LEU n 1 126 PRO n 1 127 ALA n 1 128 LEU n 1 129 THR n 1 130 PHE n 1 131 SER n 1 132 ARG n 1 133 GLN n 1 134 PRO n 1 135 CYS n 1 136 ALA n 1 137 ILE n 1 138 SER n 1 139 GLY n 1 140 TYR n 1 141 ASP n 1 142 GLU n 1 143 LEU n 1 144 HIS n 1 145 ILE n 1 146 SER n 1 147 SER n 1 148 ARG n 1 149 LEU n 1 150 GLU n 1 151 HIS n 1 152 HIS n 1 153 HIS n 1 154 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Salmonella _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella choleraesuis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q57K43_SALCH _struct_ref.pdbx_db_accession Q57K43 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTVSHYNASTARFYAFRLLPGQEVFSQLHAFVQQNQLHAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLEL TGEHLHLAVSDPYGAMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HX0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q57K43 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 141 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 141 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HX0 MSE A 1 ? UNP Q57K43 ? ? 'cloning artifact' -6 1 1 2HX0 ALA A 2 ? UNP Q57K43 ? ? 'cloning artifact' -5 2 1 2HX0 GLY A 3 ? UNP Q57K43 ? ? 'cloning artifact' -4 3 1 2HX0 ASP A 4 ? UNP Q57K43 ? ? 'cloning artifact' -3 4 1 2HX0 PRO A 5 ? UNP Q57K43 ? ? 'cloning artifact' -2 5 1 2HX0 ASN A 6 ? UNP Q57K43 ? ? 'cloning artifact' -1 6 1 2HX0 SER A 7 ? UNP Q57K43 ? ? 'cloning artifact' 0 7 1 2HX0 MSE A 8 ? UNP Q57K43 MET 1 'modified residue' 1 8 1 2HX0 HIS A 13 ? UNP Q57K43 TYR 6 'SEE REMARK 999' 6 9 1 2HX0 LEU A 23 ? UNP Q57K43 PHE 16 'SEE REMARK 999' 16 10 1 2HX0 ARG A 45 ? UNP Q57K43 HIS 38 'engineered mutation' 38 11 1 2HX0 VAL A 102 ? UNP Q57K43 ALA 95 'engineered mutation' 95 12 1 2HX0 MSE A 103 ? UNP Q57K43 MET 96 'modified residue' 96 13 1 2HX0 MSE A 108 ? UNP Q57K43 MET 101 'modified residue' 101 14 1 2HX0 MSE A 109 ? UNP Q57K43 MET 102 'modified residue' 102 15 1 2HX0 LEU A 149 ? UNP Q57K43 ? ? 'cloning artifact' 142 16 1 2HX0 GLU A 150 ? UNP Q57K43 ? ? 'cloning artifact' 143 17 1 2HX0 HIS A 151 ? UNP Q57K43 ? ? 'cloning artifact' 144 18 1 2HX0 HIS A 152 ? UNP Q57K43 ? ? 'cloning artifact' 145 19 1 2HX0 HIS A 153 ? UNP Q57K43 ? ? 'cloning artifact' 146 20 1 2HX0 HIS A 154 ? UNP Q57K43 ? ? 'cloning artifact' 147 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2HX0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.29 _exptl_crystal.description 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '200 mM Magnesium formate, 18% PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-07-23 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97900 # _reflns.entry_id 2HX0 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.55 _reflns.number_obs 46085 _reflns.number_all 46161 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 40.5 _reflns.B_iso_Wilson_estimate 15.2 _reflns.pdbx_redundancy 10.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.675 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.70 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HX0 _refine.ls_number_reflns_obs 42649 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF 381920.61 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.84 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 92.1 _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.197 _refine.ls_R_factor_R_free 0.209 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 2109 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 18.4 _refine.aniso_B[1][1] 1.27 _refine.aniso_B[2][2] 1.27 _refine.aniso_B[3][3] -2.54 _refine.aniso_B[1][2] 0.98 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.341776 _refine.solvent_model_param_bsol 58.5354 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE FRIEDEL PAIRS WERE USED FOR PHASING.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2HX0 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.09 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.19 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1048 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 119 _refine_hist.number_atoms_total 1168 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 19.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.70 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.65 _refine_ls_shell.number_reflns_R_work 5639 _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.percent_reflns_obs 77.3 _refine_ls_shell.R_factor_R_free 0.229 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 4.9 _refine_ls_shell.number_reflns_R_free 288 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2HX0 _struct.title ;Three-dimensional structure of the hypothetical protein from Salmonella cholerae-suis (aka Salmonella enterica) at the resolution 1.55 A. Northeast Structural Genomics target ScR59. ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HX0 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text ;NESG, PSI-2, ScR59, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium, DNA BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ;trimer, formed by operation symmetry/translation: 2 0 -1 0 3 1 0 0 ; _struct_biol.pdbx_parent_biol_id ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLU _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 30 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 43 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLU _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 23 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 36 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 102 C ? ? ? 1_555 A MSE 103 N ? ? A VAL 95 A MSE 96 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A MSE 103 C ? ? ? 1_555 A LEU 104 N ? ? A MSE 96 A LEU 97 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A HIS 107 C ? ? ? 1_555 A MSE 108 N ? ? A HIS 100 A MSE 101 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 108 C ? ? ? 1_555 A MSE 109 N ? ? A MSE 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A MSE 109 C ? ? ? 1_555 A PRO 110 N ? ? A MSE 102 A PRO 103 1_555 ? ? ? ? ? ? ? 1.341 ? ? metalc1 metalc ? ? A HIS 91 NE2 ? ? ? 1_555 B MG . MG ? ? A HIS 84 A MG 201 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc2 metalc ? ? A HIS 93 NE2 ? ? ? 1_555 B MG . MG ? ? A HIS 86 A MG 201 1_555 ? ? ? ? ? ? ? 2.196 ? ? metalc3 metalc ? ? A HIS 107 ND1 ? ? ? 1_555 B MG . MG ? ? A HIS 100 A MG 201 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 201 A HOH 277 2_545 ? ? ? ? ? ? ? 2.515 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 19 ? LEU A 25 ? ARG A 12 LEU A 18 A 2 THR A 113 ? GLU A 124 ? THR A 106 GLU A 117 A 3 ALA A 47 ? ARG A 62 ? ALA A 40 ARG A 55 A 4 MSE A 103 ? MSE A 108 ? MSE A 96 MSE A 101 A 5 GLY A 89 ? SER A 97 ? GLY A 82 SER A 90 A 6 THR A 70 ? GLU A 86 ? THR A 63 GLU A 79 A 7 ALA A 47 ? ARG A 62 ? ALA A 40 ARG A 55 B 1 LEU A 128 ? PRO A 134 ? LEU A 121 PRO A 127 B 2 ASP A 141 ? SER A 147 ? ASP A 134 SER A 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 25 ? N LEU A 18 O LEU A 118 ? O LEU A 111 A 2 3 O GLU A 119 ? O GLU A 112 N THR A 53 ? N THR A 46 A 3 4 N ARG A 62 ? N ARG A 55 O HIS A 107 ? O HIS A 100 A 4 5 O MSE A 108 ? O MSE A 101 N LEU A 92 ? N LEU A 85 A 5 6 O HIS A 93 ? O HIS A 86 N ASN A 82 ? N ASN A 75 A 6 7 O THR A 70 ? O THR A 63 N LEU A 61 ? N LEU A 54 B 1 2 N GLN A 133 ? N GLN A 126 O GLU A 142 ? O GLU A 135 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 77 ? GLU A 70 . ? 2_545 ? 2 AC1 5 HIS A 91 ? HIS A 84 . ? 1_555 ? 3 AC1 5 HIS A 93 ? HIS A 86 . ? 1_555 ? 4 AC1 5 HIS A 107 ? HIS A 100 . ? 1_555 ? 5 AC1 5 HOH C . ? HOH A 277 . ? 2_545 ? # _database_PDB_matrix.entry_id 2HX0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HX0 _atom_sites.fract_transf_matrix[1][1] 0.012697 _atom_sites.fract_transf_matrix[1][2] 0.007331 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014661 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021774 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -6 ? ? ? A . n A 1 2 ALA 2 -5 ? ? ? A . n A 1 3 GLY 3 -4 ? ? ? A . n A 1 4 ASP 4 -3 ? ? ? A . n A 1 5 PRO 5 -2 ? ? ? A . n A 1 6 ASN 6 -1 ? ? ? A . n A 1 7 SER 7 0 ? ? ? A . n A 1 8 MSE 8 1 ? ? ? A . n A 1 9 THR 9 2 ? ? ? A . n A 1 10 VAL 10 3 ? ? ? A . n A 1 11 SER 11 4 ? ? ? A . n A 1 12 HIS 12 5 5 HIS HIS A . n A 1 13 HIS 13 6 6 HIS HIS A . n A 1 14 ASN 14 7 7 ASN ASN A . n A 1 15 ALA 15 8 8 ALA ALA A . n A 1 16 SER 16 9 9 SER SER A . n A 1 17 THR 17 10 10 THR THR A . n A 1 18 ALA 18 11 11 ALA ALA A . n A 1 19 ARG 19 12 12 ARG ARG A . n A 1 20 PHE 20 13 13 PHE PHE A . n A 1 21 TYR 21 14 14 TYR TYR A . n A 1 22 ALA 22 15 15 ALA ALA A . n A 1 23 LEU 23 16 16 LEU LEU A . n A 1 24 ARG 24 17 17 ARG ARG A . n A 1 25 LEU 25 18 18 LEU LEU A . n A 1 26 LEU 26 19 19 LEU LEU A . n A 1 27 PRO 27 20 20 PRO PRO A . n A 1 28 GLY 28 21 21 GLY GLY A . n A 1 29 GLN 29 22 22 GLN GLN A . n A 1 30 GLU 30 23 23 GLU GLU A . n A 1 31 VAL 31 24 24 VAL VAL A . n A 1 32 PHE 32 25 25 PHE PHE A . n A 1 33 SER 33 26 26 SER SER A . n A 1 34 GLN 34 27 27 GLN GLN A . n A 1 35 LEU 35 28 28 LEU LEU A . n A 1 36 HIS 36 29 29 HIS HIS A . n A 1 37 ALA 37 30 30 ALA ALA A . n A 1 38 PHE 38 31 31 PHE PHE A . n A 1 39 VAL 39 32 32 VAL VAL A . n A 1 40 GLN 40 33 33 GLN GLN A . n A 1 41 GLN 41 34 34 GLN GLN A . n A 1 42 ASN 42 35 35 ASN ASN A . n A 1 43 GLN 43 36 36 GLN GLN A . n A 1 44 LEU 44 37 37 LEU LEU A . n A 1 45 ARG 45 38 38 ARG ARG A . n A 1 46 ALA 46 39 39 ALA ALA A . n A 1 47 ALA 47 40 40 ALA ALA A . n A 1 48 TRP 48 41 41 TRP TRP A . n A 1 49 ILE 49 42 42 ILE ILE A . n A 1 50 ALA 50 43 43 ALA ALA A . n A 1 51 GLY 51 44 44 GLY GLY A . n A 1 52 CYS 52 45 45 CYS CYS A . n A 1 53 THR 53 46 46 THR THR A . n A 1 54 GLY 54 47 47 GLY GLY A . n A 1 55 SER 55 48 48 SER SER A . n A 1 56 LEU 56 49 49 LEU LEU A . n A 1 57 THR 57 50 50 THR THR A . n A 1 58 ASP 58 51 51 ASP ASP A . n A 1 59 VAL 59 52 52 VAL VAL A . n A 1 60 ALA 60 53 53 ALA ALA A . n A 1 61 LEU 61 54 54 LEU LEU A . n A 1 62 ARG 62 55 55 ARG ARG A . n A 1 63 TYR 63 56 56 TYR TYR A . n A 1 64 ALA 64 57 57 ALA ALA A . n A 1 65 GLY 65 58 58 GLY GLY A . n A 1 66 GLN 66 59 59 GLN GLN A . n A 1 67 GLU 67 60 60 GLU GLU A . n A 1 68 ALA 68 61 61 ALA ALA A . n A 1 69 THR 69 62 62 THR THR A . n A 1 70 THR 70 63 63 THR THR A . n A 1 71 SER 71 64 64 SER SER A . n A 1 72 LEU 72 65 65 LEU LEU A . n A 1 73 THR 73 66 66 THR THR A . n A 1 74 GLY 74 67 67 GLY GLY A . n A 1 75 THR 75 68 68 THR THR A . n A 1 76 PHE 76 69 69 PHE PHE A . n A 1 77 GLU 77 70 70 GLU GLU A . n A 1 78 VAL 78 71 71 VAL VAL A . n A 1 79 ILE 79 72 72 ILE ILE A . n A 1 80 SER 80 73 73 SER SER A . n A 1 81 LEU 81 74 74 LEU LEU A . n A 1 82 ASN 82 75 75 ASN ASN A . n A 1 83 GLY 83 76 76 GLY GLY A . n A 1 84 THR 84 77 77 THR THR A . n A 1 85 LEU 85 78 78 LEU LEU A . n A 1 86 GLU 86 79 79 GLU GLU A . n A 1 87 LEU 87 80 80 LEU LEU A . n A 1 88 THR 88 81 81 THR THR A . n A 1 89 GLY 89 82 82 GLY GLY A . n A 1 90 GLU 90 83 83 GLU GLU A . n A 1 91 HIS 91 84 84 HIS HIS A . n A 1 92 LEU 92 85 85 LEU LEU A . n A 1 93 HIS 93 86 86 HIS HIS A . n A 1 94 LEU 94 87 87 LEU LEU A . n A 1 95 ALA 95 88 88 ALA ALA A . n A 1 96 VAL 96 89 89 VAL VAL A . n A 1 97 SER 97 90 90 SER SER A . n A 1 98 ASP 98 91 91 ASP ASP A . n A 1 99 PRO 99 92 92 PRO PRO A . n A 1 100 TYR 100 93 93 TYR TYR A . n A 1 101 GLY 101 94 94 GLY GLY A . n A 1 102 VAL 102 95 95 VAL VAL A . n A 1 103 MSE 103 96 96 MSE MSE A . n A 1 104 LEU 104 97 97 LEU LEU A . n A 1 105 GLY 105 98 98 GLY GLY A . n A 1 106 GLY 106 99 99 GLY GLY A . n A 1 107 HIS 107 100 100 HIS HIS A . n A 1 108 MSE 108 101 101 MSE MSE A . n A 1 109 MSE 109 102 102 MSE MSE A . n A 1 110 PRO 110 103 103 PRO PRO A . n A 1 111 GLY 111 104 104 GLY GLY A . n A 1 112 CYS 112 105 105 CYS CYS A . n A 1 113 THR 113 106 106 THR THR A . n A 1 114 VAL 114 107 107 VAL VAL A . n A 1 115 ARG 115 108 108 ARG ARG A . n A 1 116 THR 116 109 109 THR THR A . n A 1 117 THR 117 110 110 THR THR A . n A 1 118 LEU 118 111 111 LEU LEU A . n A 1 119 GLU 119 112 112 GLU GLU A . n A 1 120 LEU 120 113 113 LEU LEU A . n A 1 121 VAL 121 114 114 VAL VAL A . n A 1 122 ILE 122 115 115 ILE ILE A . n A 1 123 GLY 123 116 116 GLY GLY A . n A 1 124 GLU 124 117 117 GLU GLU A . n A 1 125 LEU 125 118 118 LEU LEU A . n A 1 126 PRO 126 119 119 PRO PRO A . n A 1 127 ALA 127 120 120 ALA ALA A . n A 1 128 LEU 128 121 121 LEU LEU A . n A 1 129 THR 129 122 122 THR THR A . n A 1 130 PHE 130 123 123 PHE PHE A . n A 1 131 SER 131 124 124 SER SER A . n A 1 132 ARG 132 125 125 ARG ARG A . n A 1 133 GLN 133 126 126 GLN GLN A . n A 1 134 PRO 134 127 127 PRO PRO A . n A 1 135 CYS 135 128 128 CYS CYS A . n A 1 136 ALA 136 129 129 ALA ALA A . n A 1 137 ILE 137 130 130 ILE ILE A . n A 1 138 SER 138 131 131 SER SER A . n A 1 139 GLY 139 132 132 GLY GLY A . n A 1 140 TYR 140 133 133 TYR TYR A . n A 1 141 ASP 141 134 134 ASP ASP A . n A 1 142 GLU 142 135 135 GLU GLU A . n A 1 143 LEU 143 136 136 LEU LEU A . n A 1 144 HIS 144 137 137 HIS HIS A . n A 1 145 ILE 145 138 138 ILE ILE A . n A 1 146 SER 146 139 139 SER SER A . n A 1 147 SER 147 140 140 SER SER A . n A 1 148 ARG 148 141 141 ARG ARG A . n A 1 149 LEU 149 142 142 LEU LEU A . n A 1 150 GLU 150 143 ? ? ? A . n A 1 151 HIS 151 144 ? ? ? A . n A 1 152 HIS 152 145 ? ? ? A . n A 1 153 HIS 153 146 ? ? ? A . n A 1 154 HIS 154 147 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 1 MG MG A . C 3 HOH 1 202 1 HOH WAT A . C 3 HOH 2 203 2 HOH WAT A . C 3 HOH 3 204 3 HOH WAT A . C 3 HOH 4 205 4 HOH WAT A . C 3 HOH 5 206 5 HOH WAT A . C 3 HOH 6 207 6 HOH WAT A . C 3 HOH 7 208 7 HOH WAT A . C 3 HOH 8 209 8 HOH WAT A . C 3 HOH 9 210 9 HOH WAT A . C 3 HOH 10 211 10 HOH WAT A . C 3 HOH 11 212 11 HOH WAT A . C 3 HOH 12 213 12 HOH WAT A . C 3 HOH 13 214 13 HOH WAT A . C 3 HOH 14 215 14 HOH WAT A . C 3 HOH 15 216 15 HOH WAT A . C 3 HOH 16 217 16 HOH WAT A . C 3 HOH 17 218 17 HOH WAT A . C 3 HOH 18 219 18 HOH WAT A . C 3 HOH 19 220 19 HOH WAT A . C 3 HOH 20 221 20 HOH WAT A . C 3 HOH 21 222 21 HOH WAT A . C 3 HOH 22 223 22 HOH WAT A . C 3 HOH 23 224 23 HOH WAT A . C 3 HOH 24 225 24 HOH WAT A . C 3 HOH 25 226 25 HOH WAT A . C 3 HOH 26 227 26 HOH WAT A . C 3 HOH 27 228 27 HOH WAT A . C 3 HOH 28 229 28 HOH WAT A . C 3 HOH 29 230 29 HOH WAT A . C 3 HOH 30 231 30 HOH WAT A . C 3 HOH 31 232 31 HOH WAT A . C 3 HOH 32 233 32 HOH WAT A . C 3 HOH 33 234 33 HOH WAT A . C 3 HOH 34 235 34 HOH WAT A . C 3 HOH 35 236 35 HOH WAT A . C 3 HOH 36 237 36 HOH WAT A . C 3 HOH 37 238 37 HOH WAT A . C 3 HOH 38 239 38 HOH WAT A . C 3 HOH 39 240 39 HOH WAT A . C 3 HOH 40 241 40 HOH WAT A . C 3 HOH 41 242 41 HOH WAT A . C 3 HOH 42 243 42 HOH WAT A . C 3 HOH 43 244 43 HOH WAT A . C 3 HOH 44 245 44 HOH WAT A . C 3 HOH 45 246 45 HOH WAT A . C 3 HOH 46 247 46 HOH WAT A . C 3 HOH 47 248 47 HOH WAT A . C 3 HOH 48 249 48 HOH WAT A . C 3 HOH 49 250 49 HOH WAT A . C 3 HOH 50 251 50 HOH WAT A . C 3 HOH 51 252 51 HOH WAT A . C 3 HOH 52 253 52 HOH WAT A . C 3 HOH 53 254 53 HOH WAT A . C 3 HOH 54 255 54 HOH WAT A . C 3 HOH 55 256 55 HOH WAT A . C 3 HOH 56 257 56 HOH WAT A . C 3 HOH 57 258 57 HOH WAT A . C 3 HOH 58 259 58 HOH WAT A . C 3 HOH 59 260 59 HOH WAT A . C 3 HOH 60 261 60 HOH WAT A . C 3 HOH 61 262 61 HOH WAT A . C 3 HOH 62 263 62 HOH WAT A . C 3 HOH 63 264 63 HOH WAT A . C 3 HOH 64 265 64 HOH WAT A . C 3 HOH 65 266 65 HOH WAT A . C 3 HOH 66 267 66 HOH WAT A . C 3 HOH 67 268 67 HOH WAT A . C 3 HOH 68 269 68 HOH WAT A . C 3 HOH 69 270 69 HOH WAT A . C 3 HOH 70 271 70 HOH WAT A . C 3 HOH 71 272 71 HOH WAT A . C 3 HOH 72 273 72 HOH WAT A . C 3 HOH 73 274 73 HOH WAT A . C 3 HOH 74 275 74 HOH WAT A . C 3 HOH 75 276 75 HOH WAT A . C 3 HOH 76 277 76 HOH WAT A . C 3 HOH 77 278 77 HOH WAT A . C 3 HOH 78 279 78 HOH WAT A . C 3 HOH 79 280 79 HOH WAT A . C 3 HOH 80 281 80 HOH WAT A . C 3 HOH 81 282 81 HOH WAT A . C 3 HOH 82 283 82 HOH WAT A . C 3 HOH 83 284 83 HOH WAT A . C 3 HOH 84 285 84 HOH WAT A . C 3 HOH 85 286 85 HOH WAT A . C 3 HOH 86 287 86 HOH WAT A . C 3 HOH 87 288 87 HOH WAT A . C 3 HOH 88 289 88 HOH WAT A . C 3 HOH 89 290 89 HOH WAT A . C 3 HOH 90 291 90 HOH WAT A . C 3 HOH 91 292 91 HOH WAT A . C 3 HOH 92 293 92 HOH WAT A . C 3 HOH 93 294 93 HOH WAT A . C 3 HOH 94 295 94 HOH WAT A . C 3 HOH 95 296 95 HOH WAT A . C 3 HOH 96 297 96 HOH WAT A . C 3 HOH 97 298 97 HOH WAT A . C 3 HOH 98 299 98 HOH WAT A . C 3 HOH 99 300 99 HOH WAT A . C 3 HOH 100 301 100 HOH WAT A . C 3 HOH 101 302 101 HOH WAT A . C 3 HOH 102 303 102 HOH WAT A . C 3 HOH 103 304 103 HOH WAT A . C 3 HOH 104 305 105 HOH WAT A . C 3 HOH 105 306 106 HOH WAT A . C 3 HOH 106 307 107 HOH WAT A . C 3 HOH 107 308 108 HOH WAT A . C 3 HOH 108 309 109 HOH WAT A . C 3 HOH 109 310 110 HOH WAT A . C 3 HOH 110 311 111 HOH WAT A . C 3 HOH 111 312 112 HOH WAT A . C 3 HOH 112 313 113 HOH WAT A . C 3 HOH 113 314 114 HOH WAT A . C 3 HOH 114 315 115 HOH WAT A . C 3 HOH 115 316 116 HOH WAT A . C 3 HOH 116 317 117 HOH WAT A . C 3 HOH 117 318 118 HOH WAT A . C 3 HOH 118 319 119 HOH WAT A . C 3 HOH 119 320 120 HOH WAT A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 103 A MSE 96 ? MET SELENOMETHIONINE 2 A MSE 108 A MSE 101 ? MET SELENOMETHIONINE 3 A MSE 109 A MSE 102 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7720 ? 1 MORE -83 ? 1 'SSA (A^2)' 15150 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5000000000 -0.8660254038 0.0000000000 39.3795000000 0.8660254038 -0.5000000000 0.0000000000 -68.2072947767 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5000000000 0.8660254038 0.0000000000 78.7590000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 213 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 91 ? A HIS 84 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 NE2 ? A HIS 93 ? A HIS 86 ? 1_555 97.8 ? 2 NE2 ? A HIS 91 ? A HIS 84 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 ND1 ? A HIS 107 ? A HIS 100 ? 1_555 107.8 ? 3 NE2 ? A HIS 93 ? A HIS 86 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 ND1 ? A HIS 107 ? A HIS 100 ? 1_555 95.3 ? 4 NE2 ? A HIS 91 ? A HIS 84 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 277 ? 2_545 80.2 ? 5 NE2 ? A HIS 93 ? A HIS 86 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 277 ? 2_545 97.8 ? 6 ND1 ? A HIS 107 ? A HIS 100 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 277 ? 2_545 163.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.value' 11 5 'Structure model' '_struct_conn.pdbx_dist_value' 12 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 25 5 'Structure model' '_struct_ref_seq_dif.details' 26 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 27 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 28 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SnB phasing . ? 4 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;AUTHORS STATE THAT THERE IS MOST LIKELY A POLYMORPHISM OR AN ERROR IN THE ORIGINAL GENOME SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 6 ? ? -94.93 -148.82 2 1 ASN A 7 ? ? 57.35 -53.97 3 1 ALA A 39 ? ? -158.55 77.01 4 1 PRO A 92 ? ? -56.09 -9.46 5 1 ARG A 108 ? ? -90.86 -67.70 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -6 ? A MSE 1 2 1 Y 1 A ALA -5 ? A ALA 2 3 1 Y 1 A GLY -4 ? A GLY 3 4 1 Y 1 A ASP -3 ? A ASP 4 5 1 Y 1 A PRO -2 ? A PRO 5 6 1 Y 1 A ASN -1 ? A ASN 6 7 1 Y 1 A SER 0 ? A SER 7 8 1 Y 1 A MSE 1 ? A MSE 8 9 1 Y 1 A THR 2 ? A THR 9 10 1 Y 1 A VAL 3 ? A VAL 10 11 1 Y 1 A SER 4 ? A SER 11 12 1 Y 1 A GLU 143 ? A GLU 150 13 1 Y 1 A HIS 144 ? A HIS 151 14 1 Y 1 A HIS 145 ? A HIS 152 15 1 Y 1 A HIS 146 ? A HIS 153 16 1 Y 1 A HIS 147 ? A HIS 154 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH #