data_2I24 # _entry.id 2I24 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2I24 pdb_00002i24 10.2210/pdb2i24/pdb RCSB RCSB039040 ? ? WWPDB D_1000039040 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2I25 . unspecified PDB 2I26 . unspecified PDB 2I27 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2I24 _pdbx_database_status.recvd_initial_deposition_date 2006-08-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stanfield, R.L.' 1 'Wilson, I.A.' 2 # _citation.id primary _citation.title 'Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 367 _citation.page_first 358 _citation.page_last 372 _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17258766 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2006.12.045 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stanfield, R.L.' 1 ? primary 'Dooley, H.' 2 ? primary 'Verdino, P.' 3 ? primary 'Flajnik, M.F.' 4 ? primary 'Wilson, I.A.' 5 ? # _cell.entry_id 2I24 _cell.length_a 53.958 _cell.length_b 53.958 _cell.length_c 79.077 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2I24 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'New Antigen Receptor PBLA8' 13437.806 1 ? ? 'variable domain' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 155 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ARVDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGT YRCKPESRYGSYDAVCAALNDQYGGGTVVTVNAAAHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;ARVDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGT YRCKPESRYGSYDAVCAALNDQYGGGTVVTVNAAAHHHHHH ; _entity_poly.pdbx_strand_id N _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ARG n 1 3 VAL n 1 4 ASP n 1 5 GLN n 1 6 THR n 1 7 PRO n 1 8 GLN n 1 9 ARG n 1 10 ILE n 1 11 THR n 1 12 LYS n 1 13 GLU n 1 14 THR n 1 15 GLY n 1 16 GLU n 1 17 SER n 1 18 LEU n 1 19 THR n 1 20 ILE n 1 21 ASN n 1 22 CYS n 1 23 VAL n 1 24 VAL n 1 25 ARG n 1 26 ASP n 1 27 SER n 1 28 ARG n 1 29 CYS n 1 30 VAL n 1 31 LEU n 1 32 SER n 1 33 THR n 1 34 GLY n 1 35 TYR n 1 36 TRP n 1 37 TYR n 1 38 ARG n 1 39 LYS n 1 40 PRO n 1 41 PRO n 1 42 GLY n 1 43 SER n 1 44 ARG n 1 45 ASN n 1 46 GLU n 1 47 GLU n 1 48 SER n 1 49 ILE n 1 50 SER n 1 51 ASP n 1 52 GLY n 1 53 GLY n 1 54 ARG n 1 55 TYR n 1 56 VAL n 1 57 GLU n 1 58 THR n 1 59 VAL n 1 60 ASN n 1 61 ARG n 1 62 GLY n 1 63 SER n 1 64 LYS n 1 65 SER n 1 66 PHE n 1 67 SER n 1 68 LEU n 1 69 ARG n 1 70 ILE n 1 71 ASN n 1 72 ASP n 1 73 LEU n 1 74 THR n 1 75 VAL n 1 76 LYS n 1 77 ASP n 1 78 SER n 1 79 GLY n 1 80 THR n 1 81 TYR n 1 82 ARG n 1 83 CYS n 1 84 LYS n 1 85 PRO n 1 86 GLU n 1 87 SER n 1 88 ARG n 1 89 TYR n 1 90 GLY n 1 91 SER n 1 92 TYR n 1 93 ASP n 1 94 ALA n 1 95 VAL n 1 96 CYS n 1 97 ALA n 1 98 ALA n 1 99 LEU n 1 100 ASN n 1 101 ASP n 1 102 GLN n 1 103 TYR n 1 104 GLY n 1 105 GLY n 1 106 GLY n 1 107 THR n 1 108 VAL n 1 109 VAL n 1 110 THR n 1 111 VAL n 1 112 ASN n 1 113 ALA n 1 114 ALA n 1 115 ALA n 1 116 HIS n 1 117 HIS n 1 118 HIS n 1 119 HIS n 1 120 HIS n 1 121 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'nurse shark' _entity_src_gen.gene_src_genus Ginglymostoma _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ginglymostoma cirratum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7801 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain xl1-blue _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pims100 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8AXH5_GINCI _struct_ref.pdbx_db_accession Q8AXH5 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2I24 _struct_ref_seq.pdbx_strand_id N _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8AXH5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 112 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 112 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2I24 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_details '24% PEG 400, 0.1M Na/K phosphate, 0.15M NaCl, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-01-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97623 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97623 # _reflns.entry_id 2I24 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 44.7 _reflns.d_resolution_high 1.35 _reflns.number_obs 26060 _reflns.number_all 26060 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.B_iso_Wilson_estimate 14.0 _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 95.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.46 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 1.95 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1226 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2I24 _refine.ls_number_reflns_obs 24753 _refine.ls_number_reflns_all 24753 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.7 _refine.ls_d_res_high 1.35 _refine.ls_percent_reflns_obs 98.71 _refine.ls_R_factor_obs 0.1741 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17212 _refine.ls_R_factor_R_free 0.2143 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1253 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.B_iso_mean 17.858 _refine.aniso_B[1][1] -0.37 _refine.aniso_B[2][2] -0.37 _refine.aniso_B[3][3] 0.74 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1SQ2, CHAIN N' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.061 _refine.pdbx_overall_ESU_R_Free 0.060 _refine.overall_SU_ML 0.037 _refine.overall_SU_B 2.008 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 872 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 155 _refine_hist.number_atoms_total 1028 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 44.7 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 887 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 620 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.802 1.954 ? 1201 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.998 3.005 ? 1487 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.180 5.000 ? 112 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.123 22.619 ? 42 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 9.976 15.000 ? 148 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.629 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.129 0.200 ? 132 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 1004 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 190 'X-RAY DIFFRACTION' ? r_nbd_refined 0.199 0.200 ? 140 'X-RAY DIFFRACTION' ? r_nbd_other 0.221 0.200 ? 625 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.177 0.200 ? 440 'X-RAY DIFFRACTION' ? r_nbtor_other 0.085 0.200 ? 549 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.134 0.200 ? 76 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.058 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.327 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.138 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.569 1.500 ? 735 'X-RAY DIFFRACTION' ? r_mcbond_other 0.797 1.500 ? 233 'X-RAY DIFFRACTION' ? r_mcangle_it 3.020 2.000 ? 900 'X-RAY DIFFRACTION' ? r_scbond_it 4.469 3.000 ? 425 'X-RAY DIFFRACTION' ? r_scangle_it 5.339 4.500 ? 301 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.132 3.000 ? 1951 'X-RAY DIFFRACTION' ? r_sphericity_free 9.864 3.000 ? 156 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.061 3.000 ? 1492 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.350 _refine_ls_shell.d_res_low 1.385 _refine_ls_shell.number_reflns_R_work 1722 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 95.19 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1722 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2I24 _struct.title 'Crystal structure analysis of the nurse shark New Antigen Receptor PBLA8 variable domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2I24 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'immunoglobulin fold, immune system' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 74 ? SER A 78 ? THR N 74 SER N 78 5 ? 5 HELX_P HELX_P2 2 TYR A 89 ? TYR A 92 ? TYR N 89 TYR N 92 5 ? 4 HELX_P HELX_P3 3 ASP A 93 ? ASN A 100 ? ASP N 93 ASN N 100 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 83 SG ? ? N CYS 22 N CYS 83 1_555 ? ? ? ? ? ? ? 2.104 ? ? disulf2 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 96 SG ? ? N CYS 29 N CYS 96 1_555 ? ? ? ? ? ? ? 2.074 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 6 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 6 _struct_mon_prot_cis.auth_asym_id N _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 7 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 7 _struct_mon_prot_cis.pdbx_auth_asym_id_2 N _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 3 ? THR A 6 ? VAL N 3 THR N 6 A 2 LEU A 18 ? VAL A 24 ? LEU N 18 VAL N 24 A 3 SER A 65 ? ILE A 70 ? SER N 65 ILE N 70 A 4 TYR A 55 ? ASN A 60 ? TYR N 55 ASN N 60 B 1 ARG A 9 ? GLU A 13 ? ARG N 9 GLU N 13 B 2 THR A 107 ? ASN A 112 ? THR N 107 ASN N 112 B 3 GLY A 79 ? SER A 87 ? GLY N 79 SER N 87 B 4 LEU A 31 ? LYS A 39 ? LEU N 31 LYS N 39 B 5 GLU A 47 ? ILE A 49 ? GLU N 47 ILE N 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 6 ? N THR N 6 O ASN A 21 ? O ASN N 21 A 2 3 N LEU A 18 ? N LEU N 18 O ILE A 70 ? O ILE N 70 A 3 4 O SER A 65 ? O SER N 65 N ASN A 60 ? N ASN N 60 B 1 2 N LYS A 12 ? N LYS N 12 O ASN A 112 ? O ASN N 112 B 2 3 O VAL A 109 ? O VAL N 109 N GLY A 79 ? N GLY N 79 B 3 4 O GLU A 86 ? O GLU N 86 N SER A 32 ? N SER N 32 B 4 5 N ARG A 38 ? N ARG N 38 O GLU A 47 ? O GLU N 47 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id N _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE CL N 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 VAL A 30 ? VAL N 30 . ? 1_555 ? 2 AC1 3 TYR A 89 ? TYR N 89 . ? 1_555 ? 3 AC1 3 CYS A 96 ? CYS N 96 . ? 1_555 ? # _database_PDB_matrix.entry_id 2I24 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2I24 _atom_sites.fract_transf_matrix[1][1] 0.018533 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018533 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012646 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? N . n A 1 2 ARG 2 2 2 ARG ARG N . n A 1 3 VAL 3 3 3 VAL VAL N . n A 1 4 ASP 4 4 4 ASP ASP N . n A 1 5 GLN 5 5 5 GLN GLN N . n A 1 6 THR 6 6 6 THR THR N . n A 1 7 PRO 7 7 7 PRO PRO N . n A 1 8 GLN 8 8 8 GLN GLN N . n A 1 9 ARG 9 9 9 ARG ARG N . n A 1 10 ILE 10 10 10 ILE ILE N . n A 1 11 THR 11 11 11 THR THR N . n A 1 12 LYS 12 12 12 LYS LYS N . n A 1 13 GLU 13 13 13 GLU GLU N . n A 1 14 THR 14 14 14 THR THR N . n A 1 15 GLY 15 15 15 GLY GLY N . n A 1 16 GLU 16 16 16 GLU GLU N . n A 1 17 SER 17 17 17 SER SER N . n A 1 18 LEU 18 18 18 LEU LEU N . n A 1 19 THR 19 19 19 THR THR N . n A 1 20 ILE 20 20 20 ILE ILE N . n A 1 21 ASN 21 21 21 ASN ASN N . n A 1 22 CYS 22 22 22 CYS CYS N . n A 1 23 VAL 23 23 23 VAL VAL N . n A 1 24 VAL 24 24 24 VAL VAL N . n A 1 25 ARG 25 25 25 ARG ARG N . n A 1 26 ASP 26 26 26 ASP ASP N . n A 1 27 SER 27 27 27 SER SER N . n A 1 28 ARG 28 28 28 ARG ARG N . n A 1 29 CYS 29 29 29 CYS CYS N . n A 1 30 VAL 30 30 30 VAL VAL N . n A 1 31 LEU 31 31 31 LEU LEU N . n A 1 32 SER 32 32 32 SER SER N . n A 1 33 THR 33 33 33 THR THR N . n A 1 34 GLY 34 34 34 GLY GLY N . n A 1 35 TYR 35 35 35 TYR TYR N . n A 1 36 TRP 36 36 36 TRP TRP N . n A 1 37 TYR 37 37 37 TYR TYR N . n A 1 38 ARG 38 38 38 ARG ARG N . n A 1 39 LYS 39 39 39 LYS LYS N . n A 1 40 PRO 40 40 40 PRO PRO N . n A 1 41 PRO 41 41 41 PRO PRO N . n A 1 42 GLY 42 42 42 GLY GLY N . n A 1 43 SER 43 43 43 SER SER N . n A 1 44 ARG 44 44 44 ARG ARG N . n A 1 45 ASN 45 45 45 ASN ASN N . n A 1 46 GLU 46 46 46 GLU GLU N . n A 1 47 GLU 47 47 47 GLU GLU N . n A 1 48 SER 48 48 48 SER SER N . n A 1 49 ILE 49 49 49 ILE ILE N . n A 1 50 SER 50 50 50 SER SER N . n A 1 51 ASP 51 51 51 ASP ASP N . n A 1 52 GLY 52 52 52 GLY GLY N . n A 1 53 GLY 53 53 53 GLY GLY N . n A 1 54 ARG 54 54 54 ARG ARG N . n A 1 55 TYR 55 55 55 TYR TYR N . n A 1 56 VAL 56 56 56 VAL VAL N . n A 1 57 GLU 57 57 57 GLU GLU N . n A 1 58 THR 58 58 58 THR THR N . n A 1 59 VAL 59 59 59 VAL VAL N . n A 1 60 ASN 60 60 60 ASN ASN N . n A 1 61 ARG 61 61 61 ARG ARG N . n A 1 62 GLY 62 62 62 GLY GLY N . n A 1 63 SER 63 63 63 SER SER N . n A 1 64 LYS 64 64 64 LYS LYS N . n A 1 65 SER 65 65 65 SER SER N . n A 1 66 PHE 66 66 66 PHE PHE N . n A 1 67 SER 67 67 67 SER SER N . n A 1 68 LEU 68 68 68 LEU LEU N . n A 1 69 ARG 69 69 69 ARG ARG N . n A 1 70 ILE 70 70 70 ILE ILE N . n A 1 71 ASN 71 71 71 ASN ASN N . n A 1 72 ASP 72 72 72 ASP ASP N . n A 1 73 LEU 73 73 73 LEU LEU N . n A 1 74 THR 74 74 74 THR THR N . n A 1 75 VAL 75 75 75 VAL VAL N . n A 1 76 LYS 76 76 76 LYS LYS N . n A 1 77 ASP 77 77 77 ASP ASP N . n A 1 78 SER 78 78 78 SER SER N . n A 1 79 GLY 79 79 79 GLY GLY N . n A 1 80 THR 80 80 80 THR THR N . n A 1 81 TYR 81 81 81 TYR TYR N . n A 1 82 ARG 82 82 82 ARG ARG N . n A 1 83 CYS 83 83 83 CYS CYS N . n A 1 84 LYS 84 84 84 LYS LYS N . n A 1 85 PRO 85 85 85 PRO PRO N . n A 1 86 GLU 86 86 86 GLU GLU N . n A 1 87 SER 87 87 87 SER SER N . n A 1 88 ARG 88 88 88 ARG ARG N . n A 1 89 TYR 89 89 89 TYR TYR N . n A 1 90 GLY 90 90 90 GLY GLY N . n A 1 91 SER 91 91 91 SER SER N . n A 1 92 TYR 92 92 92 TYR TYR N . n A 1 93 ASP 93 93 93 ASP ASP N . n A 1 94 ALA 94 94 94 ALA ALA N . n A 1 95 VAL 95 95 95 VAL VAL N . n A 1 96 CYS 96 96 96 CYS CYS N . n A 1 97 ALA 97 97 97 ALA ALA N . n A 1 98 ALA 98 98 98 ALA ALA N . n A 1 99 LEU 99 99 99 LEU LEU N . n A 1 100 ASN 100 100 100 ASN ASN N . n A 1 101 ASP 101 101 101 ASP ASP N . n A 1 102 GLN 102 102 102 GLN GLN N . n A 1 103 TYR 103 103 103 TYR TYR N . n A 1 104 GLY 104 104 104 GLY GLY N . n A 1 105 GLY 105 105 105 GLY GLY N . n A 1 106 GLY 106 106 106 GLY GLY N . n A 1 107 THR 107 107 107 THR THR N . n A 1 108 VAL 108 108 108 VAL VAL N . n A 1 109 VAL 109 109 109 VAL VAL N . n A 1 110 THR 110 110 110 THR THR N . n A 1 111 VAL 111 111 111 VAL VAL N . n A 1 112 ASN 112 112 112 ASN ASN N . n A 1 113 ALA 113 113 113 ALA ALA N . n A 1 114 ALA 114 114 114 ALA ALA N . n A 1 115 ALA 115 115 ? ? ? N . n A 1 116 HIS 116 116 ? ? ? N . n A 1 117 HIS 117 117 ? ? ? N . n A 1 118 HIS 118 118 ? ? ? N . n A 1 119 HIS 119 119 ? ? ? N . n A 1 120 HIS 120 120 ? ? ? N . n A 1 121 HIS 121 121 ? ? ? N . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL N . C 3 HOH 1 202 1 HOH HOH N . C 3 HOH 2 203 2 HOH HOH N . C 3 HOH 3 204 3 HOH HOH N . C 3 HOH 4 205 4 HOH HOH N . C 3 HOH 5 206 5 HOH HOH N . C 3 HOH 6 207 6 HOH HOH N . C 3 HOH 7 208 7 HOH HOH N . C 3 HOH 8 209 8 HOH HOH N . C 3 HOH 9 210 9 HOH HOH N . C 3 HOH 10 211 10 HOH HOH N . C 3 HOH 11 212 11 HOH HOH N . C 3 HOH 12 213 12 HOH HOH N . C 3 HOH 13 214 13 HOH HOH N . C 3 HOH 14 215 14 HOH HOH N . C 3 HOH 15 216 15 HOH HOH N . C 3 HOH 16 217 16 HOH HOH N . C 3 HOH 17 218 17 HOH HOH N . C 3 HOH 18 219 18 HOH HOH N . C 3 HOH 19 220 19 HOH HOH N . C 3 HOH 20 221 20 HOH HOH N . C 3 HOH 21 222 21 HOH HOH N . C 3 HOH 22 223 22 HOH HOH N . C 3 HOH 23 224 23 HOH HOH N . C 3 HOH 24 225 24 HOH HOH N . C 3 HOH 25 226 25 HOH HOH N . C 3 HOH 26 227 26 HOH HOH N . C 3 HOH 27 228 27 HOH HOH N . C 3 HOH 28 229 28 HOH HOH N . C 3 HOH 29 230 29 HOH HOH N . C 3 HOH 30 231 30 HOH HOH N . C 3 HOH 31 232 31 HOH HOH N . C 3 HOH 32 233 32 HOH HOH N . C 3 HOH 33 234 33 HOH HOH N . C 3 HOH 34 235 34 HOH HOH N . C 3 HOH 35 236 35 HOH HOH N . C 3 HOH 36 237 36 HOH HOH N . C 3 HOH 37 238 37 HOH HOH N . C 3 HOH 38 239 38 HOH HOH N . C 3 HOH 39 240 39 HOH HOH N . C 3 HOH 40 241 40 HOH HOH N . C 3 HOH 41 242 41 HOH HOH N . C 3 HOH 42 243 42 HOH HOH N . C 3 HOH 43 244 43 HOH HOH N . C 3 HOH 44 245 44 HOH HOH N . C 3 HOH 45 246 45 HOH HOH N . C 3 HOH 46 247 46 HOH HOH N . C 3 HOH 47 248 47 HOH HOH N . C 3 HOH 48 249 48 HOH HOH N . C 3 HOH 49 250 49 HOH HOH N . C 3 HOH 50 251 50 HOH HOH N . C 3 HOH 51 252 51 HOH HOH N . C 3 HOH 52 253 52 HOH HOH N . C 3 HOH 53 254 53 HOH HOH N . C 3 HOH 54 255 54 HOH HOH N . C 3 HOH 55 256 55 HOH HOH N . C 3 HOH 56 257 56 HOH HOH N . C 3 HOH 57 258 57 HOH HOH N . C 3 HOH 58 259 58 HOH HOH N . C 3 HOH 59 260 59 HOH HOH N . C 3 HOH 60 261 60 HOH HOH N . C 3 HOH 61 262 61 HOH HOH N . C 3 HOH 62 263 62 HOH HOH N . C 3 HOH 63 264 63 HOH HOH N . C 3 HOH 64 265 64 HOH HOH N . C 3 HOH 65 266 65 HOH HOH N . C 3 HOH 66 267 66 HOH HOH N . C 3 HOH 67 268 67 HOH HOH N . C 3 HOH 68 269 68 HOH HOH N . C 3 HOH 69 270 69 HOH HOH N . C 3 HOH 70 271 70 HOH HOH N . C 3 HOH 71 272 71 HOH HOH N . C 3 HOH 72 273 72 HOH HOH N . C 3 HOH 73 274 73 HOH HOH N . C 3 HOH 74 275 74 HOH HOH N . C 3 HOH 75 276 75 HOH HOH N . C 3 HOH 76 277 76 HOH HOH N . C 3 HOH 77 278 77 HOH HOH N . C 3 HOH 78 279 78 HOH HOH N . C 3 HOH 79 280 79 HOH HOH N . C 3 HOH 80 281 80 HOH HOH N . C 3 HOH 81 282 81 HOH HOH N . C 3 HOH 82 283 82 HOH HOH N . C 3 HOH 83 284 83 HOH HOH N . C 3 HOH 84 285 84 HOH HOH N . C 3 HOH 85 286 85 HOH HOH N . C 3 HOH 86 287 86 HOH HOH N . C 3 HOH 87 288 87 HOH HOH N . C 3 HOH 88 289 88 HOH HOH N . C 3 HOH 89 290 89 HOH HOH N . C 3 HOH 90 291 90 HOH HOH N . C 3 HOH 91 292 91 HOH HOH N . C 3 HOH 92 293 92 HOH HOH N . C 3 HOH 93 294 93 HOH HOH N . C 3 HOH 94 295 94 HOH HOH N . C 3 HOH 95 296 95 HOH HOH N . C 3 HOH 96 297 96 HOH HOH N . C 3 HOH 97 298 97 HOH HOH N . C 3 HOH 98 299 98 HOH HOH N . C 3 HOH 99 300 99 HOH HOH N . C 3 HOH 100 301 100 HOH HOH N . C 3 HOH 101 302 101 HOH HOH N . C 3 HOH 102 303 102 HOH HOH N . C 3 HOH 103 304 103 HOH HOH N . C 3 HOH 104 305 104 HOH HOH N . C 3 HOH 105 306 105 HOH HOH N . C 3 HOH 106 307 106 HOH HOH N . C 3 HOH 107 308 107 HOH HOH N . C 3 HOH 108 309 108 HOH HOH N . C 3 HOH 109 310 109 HOH HOH N . C 3 HOH 110 311 110 HOH HOH N . C 3 HOH 111 312 111 HOH HOH N . C 3 HOH 112 313 112 HOH HOH N . C 3 HOH 113 314 113 HOH HOH N . C 3 HOH 114 315 114 HOH HOH N . C 3 HOH 115 316 115 HOH HOH N . C 3 HOH 116 317 116 HOH HOH N . C 3 HOH 117 318 117 HOH HOH N . C 3 HOH 118 319 118 HOH HOH N . C 3 HOH 119 320 119 HOH HOH N . C 3 HOH 120 321 120 HOH HOH N . C 3 HOH 121 322 121 HOH HOH N . C 3 HOH 122 323 122 HOH HOH N . C 3 HOH 123 324 123 HOH HOH N . C 3 HOH 124 325 124 HOH HOH N . C 3 HOH 125 326 125 HOH HOH N . C 3 HOH 126 327 126 HOH HOH N . C 3 HOH 127 328 127 HOH HOH N . C 3 HOH 128 329 128 HOH HOH N . C 3 HOH 129 330 129 HOH HOH N . C 3 HOH 130 331 130 HOH HOH N . C 3 HOH 131 332 131 HOH HOH N . C 3 HOH 132 333 132 HOH HOH N . C 3 HOH 133 334 133 HOH HOH N . C 3 HOH 134 335 134 HOH HOH N . C 3 HOH 135 336 135 HOH HOH N . C 3 HOH 136 337 136 HOH HOH N . C 3 HOH 137 338 137 HOH HOH N . C 3 HOH 138 339 138 HOH HOH N . C 3 HOH 139 340 139 HOH HOH N . C 3 HOH 140 341 140 HOH HOH N . C 3 HOH 141 342 141 HOH HOH N . C 3 HOH 142 343 142 HOH HOH N . C 3 HOH 143 344 143 HOH HOH N . C 3 HOH 144 345 144 HOH HOH N . C 3 HOH 145 346 145 HOH HOH N . C 3 HOH 146 347 146 HOH HOH N . C 3 HOH 147 348 147 HOH HOH N . C 3 HOH 148 349 148 HOH HOH N . C 3 HOH 149 350 149 HOH HOH N . C 3 HOH 150 351 150 HOH HOH N . C 3 HOH 151 352 151 HOH HOH N . C 3 HOH 152 353 152 HOH HOH N . C 3 HOH 153 354 153 HOH HOH N . C 3 HOH 154 355 154 HOH HOH N . C 3 HOH 155 356 155 HOH HOH N . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 30.9152 _pdbx_refine_tls.origin_y 4.6679 _pdbx_refine_tls.origin_z 61.9594 _pdbx_refine_tls.T[1][1] -0.1466 _pdbx_refine_tls.T[2][2] -0.1349 _pdbx_refine_tls.T[3][3] -0.1547 _pdbx_refine_tls.T[1][2] -0.0066 _pdbx_refine_tls.T[1][3] -0.0136 _pdbx_refine_tls.T[2][3] 0.0066 _pdbx_refine_tls.L[1][1] 1.1906 _pdbx_refine_tls.L[2][2] 2.4534 _pdbx_refine_tls.L[3][3] 1.0138 _pdbx_refine_tls.L[1][2] -1.1115 _pdbx_refine_tls.L[1][3] 0.0706 _pdbx_refine_tls.L[2][3] 0.3208 _pdbx_refine_tls.S[1][1] 0.0428 _pdbx_refine_tls.S[1][2] 0.0426 _pdbx_refine_tls.S[1][3] -0.0064 _pdbx_refine_tls.S[2][1] -0.0860 _pdbx_refine_tls.S[2][2] -0.0577 _pdbx_refine_tls.S[2][3] 0.0135 _pdbx_refine_tls.S[3][1] 0.0480 _pdbx_refine_tls.S[3][2] 0.0092 _pdbx_refine_tls.S[3][3] 0.0149 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id N _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id N _pdbx_refine_tls_group.end_auth_seq_id 114 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 114 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 Blu-Ice 'data collection' . ? 2 EPMR phasing . ? 3 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE AT THE TIME OF PROCESSING, A UNP REFERENCE SEQUENCE WAS NOT AVAILABLE FOR THE NEW ANTIGEN RECEPTOR PBLA8. ; # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB N GLU 46 ? ? CG N GLU 46 ? ? 1.310 1.517 -0.207 0.019 N 2 1 CB N SER 63 ? ? OG N SER 63 ? ? 1.331 1.418 -0.087 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA N CYS 22 ? ? CB N CYS 22 ? ? SG N CYS 22 ? ? 130.05 114.20 15.85 1.10 N 2 1 NE N ARG 38 ? ? CZ N ARG 38 ? ? NH1 N ARG 38 ? ? 124.73 120.30 4.43 0.50 N 3 1 CB N ASP 51 ? ? CG N ASP 51 ? ? OD1 N ASP 51 ? ? 125.19 118.30 6.89 0.90 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 N ALA 1 ? A ALA 1 2 1 Y 1 N ALA 115 ? A ALA 115 3 1 Y 1 N HIS 116 ? A HIS 116 4 1 Y 1 N HIS 117 ? A HIS 117 5 1 Y 1 N HIS 118 ? A HIS 118 6 1 Y 1 N HIS 119 ? A HIS 119 7 1 Y 1 N HIS 120 ? A HIS 120 8 1 Y 1 N HIS 121 ? A HIS 121 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 PHE N N N N 231 PHE CA C N S 232 PHE C C N N 233 PHE O O N N 234 PHE CB C N N 235 PHE CG C Y N 236 PHE CD1 C Y N 237 PHE CD2 C Y N 238 PHE CE1 C Y N 239 PHE CE2 C Y N 240 PHE CZ C Y N 241 PHE OXT O N N 242 PHE H H N N 243 PHE H2 H N N 244 PHE HA H N N 245 PHE HB2 H N N 246 PHE HB3 H N N 247 PHE HD1 H N N 248 PHE HD2 H N N 249 PHE HE1 H N N 250 PHE HE2 H N N 251 PHE HZ H N N 252 PHE HXT H N N 253 PRO N N N N 254 PRO CA C N S 255 PRO C C N N 256 PRO O O N N 257 PRO CB C N N 258 PRO CG C N N 259 PRO CD C N N 260 PRO OXT O N N 261 PRO H H N N 262 PRO HA H N N 263 PRO HB2 H N N 264 PRO HB3 H N N 265 PRO HG2 H N N 266 PRO HG3 H N N 267 PRO HD2 H N N 268 PRO HD3 H N N 269 PRO HXT H N N 270 SER N N N N 271 SER CA C N S 272 SER C C N N 273 SER O O N N 274 SER CB C N N 275 SER OG O N N 276 SER OXT O N N 277 SER H H N N 278 SER H2 H N N 279 SER HA H N N 280 SER HB2 H N N 281 SER HB3 H N N 282 SER HG H N N 283 SER HXT H N N 284 THR N N N N 285 THR CA C N S 286 THR C C N N 287 THR O O N N 288 THR CB C N R 289 THR OG1 O N N 290 THR CG2 C N N 291 THR OXT O N N 292 THR H H N N 293 THR H2 H N N 294 THR HA H N N 295 THR HB H N N 296 THR HG1 H N N 297 THR HG21 H N N 298 THR HG22 H N N 299 THR HG23 H N N 300 THR HXT H N N 301 TRP N N N N 302 TRP CA C N S 303 TRP C C N N 304 TRP O O N N 305 TRP CB C N N 306 TRP CG C Y N 307 TRP CD1 C Y N 308 TRP CD2 C Y N 309 TRP NE1 N Y N 310 TRP CE2 C Y N 311 TRP CE3 C Y N 312 TRP CZ2 C Y N 313 TRP CZ3 C Y N 314 TRP CH2 C Y N 315 TRP OXT O N N 316 TRP H H N N 317 TRP H2 H N N 318 TRP HA H N N 319 TRP HB2 H N N 320 TRP HB3 H N N 321 TRP HD1 H N N 322 TRP HE1 H N N 323 TRP HE3 H N N 324 TRP HZ2 H N N 325 TRP HZ3 H N N 326 TRP HH2 H N N 327 TRP HXT H N N 328 TYR N N N N 329 TYR CA C N S 330 TYR C C N N 331 TYR O O N N 332 TYR CB C N N 333 TYR CG C Y N 334 TYR CD1 C Y N 335 TYR CD2 C Y N 336 TYR CE1 C Y N 337 TYR CE2 C Y N 338 TYR CZ C Y N 339 TYR OH O N N 340 TYR OXT O N N 341 TYR H H N N 342 TYR H2 H N N 343 TYR HA H N N 344 TYR HB2 H N N 345 TYR HB3 H N N 346 TYR HD1 H N N 347 TYR HD2 H N N 348 TYR HE1 H N N 349 TYR HE2 H N N 350 TYR HH H N N 351 TYR HXT H N N 352 VAL N N N N 353 VAL CA C N S 354 VAL C C N N 355 VAL O O N N 356 VAL CB C N N 357 VAL CG1 C N N 358 VAL CG2 C N N 359 VAL OXT O N N 360 VAL H H N N 361 VAL H2 H N N 362 VAL HA H N N 363 VAL HB H N N 364 VAL HG11 H N N 365 VAL HG12 H N N 366 VAL HG13 H N N 367 VAL HG21 H N N 368 VAL HG22 H N N 369 VAL HG23 H N N 370 VAL HXT H N N 371 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 PHE N CA sing N N 218 PHE N H sing N N 219 PHE N H2 sing N N 220 PHE CA C sing N N 221 PHE CA CB sing N N 222 PHE CA HA sing N N 223 PHE C O doub N N 224 PHE C OXT sing N N 225 PHE CB CG sing N N 226 PHE CB HB2 sing N N 227 PHE CB HB3 sing N N 228 PHE CG CD1 doub Y N 229 PHE CG CD2 sing Y N 230 PHE CD1 CE1 sing Y N 231 PHE CD1 HD1 sing N N 232 PHE CD2 CE2 doub Y N 233 PHE CD2 HD2 sing N N 234 PHE CE1 CZ doub Y N 235 PHE CE1 HE1 sing N N 236 PHE CE2 CZ sing Y N 237 PHE CE2 HE2 sing N N 238 PHE CZ HZ sing N N 239 PHE OXT HXT sing N N 240 PRO N CA sing N N 241 PRO N CD sing N N 242 PRO N H sing N N 243 PRO CA C sing N N 244 PRO CA CB sing N N 245 PRO CA HA sing N N 246 PRO C O doub N N 247 PRO C OXT sing N N 248 PRO CB CG sing N N 249 PRO CB HB2 sing N N 250 PRO CB HB3 sing N N 251 PRO CG CD sing N N 252 PRO CG HG2 sing N N 253 PRO CG HG3 sing N N 254 PRO CD HD2 sing N N 255 PRO CD HD3 sing N N 256 PRO OXT HXT sing N N 257 SER N CA sing N N 258 SER N H sing N N 259 SER N H2 sing N N 260 SER CA C sing N N 261 SER CA CB sing N N 262 SER CA HA sing N N 263 SER C O doub N N 264 SER C OXT sing N N 265 SER CB OG sing N N 266 SER CB HB2 sing N N 267 SER CB HB3 sing N N 268 SER OG HG sing N N 269 SER OXT HXT sing N N 270 THR N CA sing N N 271 THR N H sing N N 272 THR N H2 sing N N 273 THR CA C sing N N 274 THR CA CB sing N N 275 THR CA HA sing N N 276 THR C O doub N N 277 THR C OXT sing N N 278 THR CB OG1 sing N N 279 THR CB CG2 sing N N 280 THR CB HB sing N N 281 THR OG1 HG1 sing N N 282 THR CG2 HG21 sing N N 283 THR CG2 HG22 sing N N 284 THR CG2 HG23 sing N N 285 THR OXT HXT sing N N 286 TRP N CA sing N N 287 TRP N H sing N N 288 TRP N H2 sing N N 289 TRP CA C sing N N 290 TRP CA CB sing N N 291 TRP CA HA sing N N 292 TRP C O doub N N 293 TRP C OXT sing N N 294 TRP CB CG sing N N 295 TRP CB HB2 sing N N 296 TRP CB HB3 sing N N 297 TRP CG CD1 doub Y N 298 TRP CG CD2 sing Y N 299 TRP CD1 NE1 sing Y N 300 TRP CD1 HD1 sing N N 301 TRP CD2 CE2 doub Y N 302 TRP CD2 CE3 sing Y N 303 TRP NE1 CE2 sing Y N 304 TRP NE1 HE1 sing N N 305 TRP CE2 CZ2 sing Y N 306 TRP CE3 CZ3 doub Y N 307 TRP CE3 HE3 sing N N 308 TRP CZ2 CH2 doub Y N 309 TRP CZ2 HZ2 sing N N 310 TRP CZ3 CH2 sing Y N 311 TRP CZ3 HZ3 sing N N 312 TRP CH2 HH2 sing N N 313 TRP OXT HXT sing N N 314 TYR N CA sing N N 315 TYR N H sing N N 316 TYR N H2 sing N N 317 TYR CA C sing N N 318 TYR CA CB sing N N 319 TYR CA HA sing N N 320 TYR C O doub N N 321 TYR C OXT sing N N 322 TYR CB CG sing N N 323 TYR CB HB2 sing N N 324 TYR CB HB3 sing N N 325 TYR CG CD1 doub Y N 326 TYR CG CD2 sing Y N 327 TYR CD1 CE1 sing Y N 328 TYR CD1 HD1 sing N N 329 TYR CD2 CE2 doub Y N 330 TYR CD2 HD2 sing N N 331 TYR CE1 CZ doub Y N 332 TYR CE1 HE1 sing N N 333 TYR CE2 CZ sing Y N 334 TYR CE2 HE2 sing N N 335 TYR CZ OH sing N N 336 TYR OH HH sing N N 337 TYR OXT HXT sing N N 338 VAL N CA sing N N 339 VAL N H sing N N 340 VAL N H2 sing N N 341 VAL CA C sing N N 342 VAL CA CB sing N N 343 VAL CA HA sing N N 344 VAL C O doub N N 345 VAL C OXT sing N N 346 VAL CB CG1 sing N N 347 VAL CB CG2 sing N N 348 VAL CB HB sing N N 349 VAL CG1 HG11 sing N N 350 VAL CG1 HG12 sing N N 351 VAL CG1 HG13 sing N N 352 VAL CG2 HG21 sing N N 353 VAL CG2 HG22 sing N N 354 VAL CG2 HG23 sing N N 355 VAL OXT HXT sing N N 356 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SQ2 _pdbx_initial_refinement_model.details 'PDB ENTRY 1SQ2, CHAIN N' #