HEADER HYDROLASE 29-AUG-06 2I6Q TITLE COMPLEMENT COMPONENT C2A COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT C2A FRAGMENT; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.43; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C2A; SOURCE 6 EXPRESSION_SYSTEM: MESOCRICETUS AURATUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: GOLDEN HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10036; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNUT KEYWDS SERINE PROTEASE DOMAIN, VON WILLEBRAND FACTOR-A DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.J.MILDER,H.C.A.RAAIJMAKERS,D.A.A.VANDEPUTTE,A.SCHOUTEN, AUTHOR 2 E.G.HUIZINGA,R.A.ROMIJN,W.HEMRIKA,A.ROOS,M.R.DAHA,P.GROS REVDAT 6 06-NOV-24 2I6Q 1 REMARK REVDAT 5 30-AUG-23 2I6Q 1 HETSYN REVDAT 4 29-JUL-20 2I6Q 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 2I6Q 1 VERSN REVDAT 2 24-FEB-09 2I6Q 1 VERSN REVDAT 1 17-OCT-06 2I6Q 0 JRNL AUTH F.J.MILDER,H.C.RAAIJMAKERS,M.D.VANDEPUTTE,A.SCHOUTEN, JRNL AUTH 2 E.G.HUIZINGA,R.A.ROMIJN,W.HEMRIKA,A.ROOS,M.R.DAHA,P.GROS JRNL TITL STRUCTURE OF COMPLEMENT COMPONENT C2A: IMPLICATIONS FOR JRNL TITL 2 CONVERTASE FORMATION AND SUBSTRATE BINDING. JRNL REF STRUCTURE V. 14 1587 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 17027507 JRNL DOI 10.1016/J.STR.2006.08.008 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 27470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1389 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1144 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 52.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.68000 REMARK 3 B22 (A**2) : 2.15000 REMARK 3 B33 (A**2) : -0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.285 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.214 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.048 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4188 ; 0.004 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5667 ; 0.861 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 501 ; 6.356 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 196 ;36.371 ;24.490 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 731 ;16.651 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;17.374 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 643 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3105 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1757 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2828 ; 0.320 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 220 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.249 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.317 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2564 ; 0.934 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4045 ; 1.494 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1798 ; 2.343 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1622 ; 3.637 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 438 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2050 -13.9150 41.9780 REMARK 3 T TENSOR REMARK 3 T11: -0.0999 T22: -0.1316 REMARK 3 T33: -0.2495 T12: -0.0098 REMARK 3 T13: -0.0108 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 4.7984 L22: 1.6273 REMARK 3 L33: 7.2946 L12: 0.6328 REMARK 3 L13: -1.9116 L23: -1.7585 REMARK 3 S TENSOR REMARK 3 S11: 0.0968 S12: -0.2484 S13: 0.1433 REMARK 3 S21: 0.1588 S22: -0.1364 S23: 0.0100 REMARK 3 S31: -0.4730 S32: 0.1064 S33: 0.0395 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 439 A 732 REMARK 3 ORIGIN FOR THE GROUP (A): -6.9700 -18.9350 3.0400 REMARK 3 T TENSOR REMARK 3 T11: -0.1684 T22: -0.2092 REMARK 3 T33: -0.2299 T12: 0.0283 REMARK 3 T13: 0.0138 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 2.4014 L22: 2.6218 REMARK 3 L33: 4.5901 L12: 0.3667 REMARK 3 L13: 0.6342 L23: 0.1915 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: 0.1675 S13: -0.0288 REMARK 3 S21: -0.0210 S22: 0.0551 S23: 0.2148 REMARK 3 S31: 0.0250 S32: -0.3172 S33: -0.0375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2I6Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000039206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9330 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27471 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : 0.52300 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY: 2I6S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 1000, 0.025 M SODIUM MALONATE, REMARK 280 0.0375 M IMIDAZOLE, 0.0375 M BORIC ACID, 3% XYLITOL, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.59250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 465 HIS A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 687 REMARK 465 SER A 688 REMARK 465 ALA A 689 REMARK 465 ASP A 690 REMARK 465 LYS A 691 REMARK 465 ASN A 692 REMARK 465 SER A 693 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 682 O ALA A 697 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 701 OE1 GLN A 721 1455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 240 CB - CG - OD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 279 -107.83 -135.01 REMARK 500 LYS A 358 59.87 -91.63 REMARK 500 ASN A 377 42.86 70.14 REMARK 500 ASN A 379 -138.20 -144.05 REMARK 500 ASP A 411 -101.40 64.22 REMARK 500 GLN A 469 -18.00 76.20 REMARK 500 GLN A 480 -10.21 -141.98 REMARK 500 PHE A 489 75.24 -114.62 REMARK 500 ASP A 525 102.88 -168.73 REMARK 500 CYS A 564 15.47 80.59 REMARK 500 ASP A 634 101.27 -160.09 REMARK 500 GLN A 649 -117.65 50.54 REMARK 500 SER A 678 -70.45 -113.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 242 OG REMARK 620 2 SER A 244 OG 97.1 REMARK 620 3 THR A 317 OG1 81.6 177.0 REMARK 620 4 HOH A1002 O 100.1 90.7 92.2 REMARK 620 5 HOH A1003 O 167.1 90.4 90.4 90.2 REMARK 620 6 MLI A1004 O8 81.3 84.2 92.9 174.9 89.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2I6S RELATED DB: PDB DBREF 2I6Q A 224 732 UNP P06681 CO2_HUMAN 242 752 SEQADV 2I6Q HIS A 216 UNP P06681 EXPRESSION TAG SEQADV 2I6Q HIS A 217 UNP P06681 EXPRESSION TAG SEQADV 2I6Q HIS A 218 UNP P06681 EXPRESSION TAG SEQADV 2I6Q HIS A 219 UNP P06681 EXPRESSION TAG SEQADV 2I6Q HIS A 220 UNP P06681 EXPRESSION TAG SEQADV 2I6Q HIS A 221 UNP P06681 EXPRESSION TAG SEQADV 2I6Q GLY A 222 UNP P06681 CLONING ARTIFACT SEQADV 2I6Q SER A 223 UNP P06681 CLONING ARTIFACT SEQRES 1 A 517 HIS HIS HIS HIS HIS HIS GLY SER LYS ILE GLN ILE GLN SEQRES 2 A 517 ARG SER GLY HIS LEU ASN LEU TYR LEU LEU LEU ASP CYS SEQRES 3 A 517 SER GLN SER VAL SER GLU ASN ASP PHE LEU ILE PHE LYS SEQRES 4 A 517 GLU SER ALA SER LEU MET VAL ASP ARG ILE PHE SER PHE SEQRES 5 A 517 GLU ILE ASN VAL SER VAL ALA ILE ILE THR PHE ALA SER SEQRES 6 A 517 GLU PRO LYS VAL LEU MET SER VAL LEU ASN ASP ASN SER SEQRES 7 A 517 ARG ASP MET THR GLU VAL ILE SER SER LEU GLU ASN ALA SEQRES 8 A 517 ASN TYR LYS ASP HIS GLU ASN GLY THR GLY THR ASN THR SEQRES 9 A 517 TYR ALA ALA LEU ASN SER VAL TYR LEU MET MET ASN ASN SEQRES 10 A 517 GLN MET ARG LEU LEU GLY MET GLU THR MET ALA TRP GLN SEQRES 11 A 517 GLU ILE ARG HIS ALA ILE ILE LEU LEU THR ASP GLY LYS SEQRES 12 A 517 SER ASN MET GLY GLY SER PRO LYS THR ALA VAL ASP HIS SEQRES 13 A 517 ILE ARG GLU ILE LEU ASN ILE ASN GLN LYS ARG ASN ASP SEQRES 14 A 517 TYR LEU ASP ILE TYR ALA ILE GLY VAL GLY LYS LEU ASP SEQRES 15 A 517 VAL ASP TRP ARG GLU LEU ASN GLU LEU GLY SER LYS LYS SEQRES 16 A 517 ASP GLY GLU ARG HIS ALA PHE ILE LEU GLN ASP THR LYS SEQRES 17 A 517 ALA LEU HIS GLN VAL PHE GLU HIS MET LEU ASP VAL SER SEQRES 18 A 517 LYS LEU THR ASP THR ILE CYS GLY VAL GLY ASN MET SER SEQRES 19 A 517 ALA ASN ALA SER ASP GLN GLU ARG THR PRO TRP HIS VAL SEQRES 20 A 517 THR ILE LYS PRO LYS SER GLN GLU THR CYS ARG GLY ALA SEQRES 21 A 517 LEU ILE SER ASP GLN TRP VAL LEU THR ALA ALA HIS CYS SEQRES 22 A 517 PHE ARG ASP GLY ASN ASP HIS SER LEU TRP ARG VAL ASN SEQRES 23 A 517 VAL GLY ASP PRO LYS SER GLN TRP GLY LYS GLU PHE LEU SEQRES 24 A 517 ILE GLU LYS ALA VAL ILE SER PRO GLY PHE ASP VAL PHE SEQRES 25 A 517 ALA LYS LYS ASN GLN GLY ILE LEU GLU PHE TYR GLY ASP SEQRES 26 A 517 ASP ILE ALA LEU LEU LYS LEU ALA GLN LYS VAL LYS MET SEQRES 27 A 517 SER THR HIS ALA ARG PRO ILE CYS LEU PRO CYS THR MET SEQRES 28 A 517 GLU ALA ASN LEU ALA LEU ARG ARG PRO GLN GLY SER THR SEQRES 29 A 517 CYS ARG ASP HIS GLU ASN GLU LEU LEU ASN LYS GLN SER SEQRES 30 A 517 VAL PRO ALA HIS PHE VAL ALA LEU ASN GLY SER LYS LEU SEQRES 31 A 517 ASN ILE ASN LEU LYS MET GLY VAL GLU TRP THR SER CYS SEQRES 32 A 517 ALA GLU VAL VAL SER GLN GLU LYS THR MET PHE PRO ASN SEQRES 33 A 517 LEU THR ASP VAL ARG GLU VAL VAL THR ASP GLN PHE LEU SEQRES 34 A 517 CYS SER GLY THR GLN GLU ASP GLU SER PRO CYS LYS GLY SEQRES 35 A 517 GLU SER GLY GLY ALA VAL PHE LEU GLU ARG ARG PHE ARG SEQRES 36 A 517 PHE PHE GLN VAL GLY LEU VAL SER TRP GLY LEU TYR ASN SEQRES 37 A 517 PRO CYS LEU GLY SER ALA ASP LYS ASN SER ARG LYS ARG SEQRES 38 A 517 ALA PRO ARG SER LYS VAL PRO PRO PRO ARG ASP PHE HIS SEQRES 39 A 517 ILE ASN LEU PHE ARG MET GLN PRO TRP LEU ARG GLN HIS SEQRES 40 A 517 LEU GLY ASP VAL LEU ASN PHE LEU PRO LEU MODRES 2I6Q ASN A 313 ASN GLYCOSYLATION SITE MODRES 2I6Q ASN A 447 ASN GLYCOSYLATION SITE MODRES 2I6Q ASN A 601 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG A1601 14 HET MN A1001 1 HET MLI A1004 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MN MANGANESE (II) ION HETNAM MLI MALONATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 2 FUC C6 H12 O5 FORMUL 3 BMA C6 H12 O6 FORMUL 5 MN MN 2+ FORMUL 6 MLI C3 H2 O4 2- FORMUL 7 HOH *133(H2 O) HELIX 1 1 SER A 246 PHE A 265 1 20 HELIX 2 2 SER A 266 GLU A 268 5 3 HELIX 3 3 ASN A 290 ARG A 294 5 5 HELIX 4 4 ASP A 295 ALA A 306 1 12 HELIX 5 5 ASN A 307 GLU A 312 5 6 HELIX 6 6 ASN A 318 GLY A 338 1 21 HELIX 7 7 THR A 341 GLU A 346 1 6 HELIX 8 8 SER A 364 ASN A 377 1 14 HELIX 9 9 GLN A 380 ASP A 384 5 5 HELIX 10 10 ASP A 399 GLY A 407 1 9 HELIX 11 11 ASP A 421 MET A 432 1 12 HELIX 12 12 SER A 453 THR A 458 1 6 HELIX 13 13 ALA A 485 PHE A 489 5 5 HELIX 14 14 ASP A 494 TRP A 498 5 5 HELIX 15 15 LYS A 529 GLY A 533 5 5 HELIX 16 16 THR A 565 LEU A 572 1 8 HELIX 17 17 THR A 579 LEU A 588 1 10 HELIX 18 18 GLY A 612 GLU A 620 1 9 HELIX 19 19 VAL A 621 GLU A 625 5 5 HELIX 20 20 ASP A 634 VAL A 638 5 5 HELIX 21 21 CYS A 655 SER A 659 5 5 HELIX 22 22 MET A 715 GLY A 724 1 10 SHEET 1 A 2 ILE A 225 GLN A 226 0 SHEET 2 A 2 LEU A 433 ASP A 434 1 O ASP A 434 N ILE A 225 SHEET 1 B 6 PRO A 282 MET A 286 0 SHEET 2 B 6 VAL A 271 PHE A 278 -1 N ILE A 275 O LEU A 285 SHEET 3 B 6 HIS A 232 ASP A 240 1 N LEU A 239 O ILE A 276 SHEET 4 B 6 ILE A 347 LEU A 354 1 O ARG A 348 N HIS A 232 SHEET 5 B 6 LEU A 386 VAL A 393 1 O ASP A 387 N ILE A 351 SHEET 6 B 6 ALA A 416 LEU A 419 1 O LEU A 419 N GLY A 392 SHEET 1 C 7 LYS A 511 PHE A 513 0 SHEET 2 C 7 ARG A 499 VAL A 502 -1 N VAL A 500 O PHE A 513 SHEET 3 C 7 HIS A 461 LYS A 465 -1 N LYS A 465 O ARG A 499 SHEET 4 C 7 CYS A 472 LEU A 476 -1 O CYS A 472 N ILE A 464 SHEET 5 C 7 TRP A 481 THR A 484 -1 O LEU A 483 N ALA A 475 SHEET 6 C 7 ALA A 543 LEU A 547 -1 O LEU A 545 N VAL A 482 SHEET 7 C 7 ILE A 515 ILE A 520 -1 N GLU A 516 O LYS A 546 SHEET 1 D 6 LYS A 604 LYS A 610 0 SHEET 2 D 6 SER A 592 VAL A 598 -1 N VAL A 593 O LEU A 609 SHEET 3 D 6 ALA A 662 ARG A 667 -1 O PHE A 664 N HIS A 596 SHEET 4 D 6 ARG A 670 GLY A 680 -1 O PHE A 672 N LEU A 665 SHEET 5 D 6 ASP A 707 ASN A 711 -1 O PHE A 708 N TRP A 679 SHEET 6 D 6 PHE A 643 SER A 646 -1 N LEU A 644 O HIS A 709 SSBOND 1 CYS A 443 CYS A 561 1555 1555 2.05 SSBOND 2 CYS A 472 CYS A 488 1555 1555 2.03 SSBOND 3 CYS A 564 CYS A 580 1555 1555 2.04 SSBOND 4 CYS A 618 CYS A 645 1555 1555 2.04 SSBOND 5 CYS A 655 CYS A 685 1555 1555 2.03 LINK ND2 ASN A 313 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 447 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 601 C1 NAG A1601 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK OG SER A 242 MN MN A1001 1555 1555 2.16 LINK OG SER A 244 MN MN A1001 1555 1555 2.18 LINK OG1 THR A 317 MN MN A1001 1555 1555 2.17 LINK MN MN A1001 O HOH A1002 1555 1555 2.14 LINK MN MN A1001 O HOH A1003 1555 1555 1.96 LINK MN MN A1001 O8 MLI A1004 1555 1555 2.16 CISPEP 1 VAL A 702 PRO A 703 0 -9.55 CRYST1 51.482 77.185 70.858 90.00 109.55 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019424 0.000000 0.006897 0.00000 SCALE2 0.000000 0.012956 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014976 0.00000