HEADER HYDROLASE 29-AUG-06 2I6S TITLE COMPLEMENT COMPONENT C2A COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT C2A FRAGMENT; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.21.43; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C2A; SOURCE 6 EXPRESSION_SYSTEM: MESOCRICETUS AURATUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: GOLDEN HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10036; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNUT KEYWDS SERINE PROTEASE DOMAIN, VON WILLEBRAND FACTOR-A DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.J.MILDER,H.C.A.RAAIJMAKERS,D.A.A.VANDEPUTTE,A.SCHOUTEN, AUTHOR 2 E.G.HUIZINGA,R.A.ROMIJN,W.HEMRIKA,A.ROOS,M.R.DAHA,P.GROS REVDAT 6 25-DEC-24 2I6S 1 REMARK LINK ATOM REVDAT 5 30-AUG-23 2I6S 1 REMARK HETSYN REVDAT 4 29-JUL-20 2I6S 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 13-JUL-11 2I6S 1 VERSN REVDAT 2 24-FEB-09 2I6S 1 VERSN REVDAT 1 17-OCT-06 2I6S 0 JRNL AUTH F.J.MILDER,H.C.RAAIJMAKERS,M.D.VANDEPUTTE,A.SCHOUTEN, JRNL AUTH 2 E.G.HUIZINGA,R.A.ROMIJN,W.HEMRIKA,A.ROOS,M.R.DAHA,P.GROS JRNL TITL STRUCTURE OF COMPLEMENT COMPONENT C2A: IMPLICATIONS FOR JRNL TITL 2 CONVERTASE FORMATION AND SUBSTRATE BINDING. JRNL REF STRUCTURE V. 14 1587 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 17027507 JRNL DOI 10.1016/J.STR.2006.08.008 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 13867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 690 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 829 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3928 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 144 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.84000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : -2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.34000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.442 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.357 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.401 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.853 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4154 ; 0.004 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5634 ; 0.670 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 493 ; 6.536 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;38.502 ;24.503 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 705 ;18.684 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;18.096 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 652 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3050 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1784 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2794 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 157 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.159 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.206 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2524 ; 0.249 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3983 ; 0.463 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1793 ; 0.722 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1651 ; 1.403 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 440 REMARK 3 ORIGIN FOR THE GROUP (A): 37.5370 -14.7990 74.8310 REMARK 3 T TENSOR REMARK 3 T11: 0.1937 T22: 0.2224 REMARK 3 T33: 0.0480 T12: 0.0217 REMARK 3 T13: -0.0981 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 3.4765 L22: 4.0830 REMARK 3 L33: 8.3694 L12: 0.2265 REMARK 3 L13: -2.1428 L23: -0.6581 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: -0.0083 S13: 0.2713 REMARK 3 S21: 0.2098 S22: 0.0525 S23: 0.1988 REMARK 3 S31: -0.0098 S32: -0.1831 S33: -0.2468 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 441 A 731 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1240 -20.3050 36.9580 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: -0.0015 REMARK 3 T33: 0.0158 T12: 0.0026 REMARK 3 T13: -0.0136 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 3.7031 L22: 2.9250 REMARK 3 L33: 4.4411 L12: -0.0182 REMARK 3 L13: 0.7741 L23: 0.0974 REMARK 3 S TENSOR REMARK 3 S11: -0.1351 S12: 0.1947 S13: -0.0407 REMARK 3 S21: 0.0960 S22: 0.1253 S23: 0.2299 REMARK 3 S31: -0.2613 S32: -0.0250 S33: 0.0099 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2I6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000039208. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13881 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 37.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : 0.42000 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES: 1DLE (SP-DOMAIN) AND 1Q0P (VWA REMARK 200 -DOMAIN) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 1000, 0.025 M SODIUM MALONATE, REMARK 280 0.0375 M IMIDAZOLE, 0.0375 M BORIC ACID, 20 MM LICL, PH 7.0, REMARK 280 HANGING DROP VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.54000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 465 HIS A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 GLY A 222 REMARK 465 LYS A 395 REMARK 465 LEU A 396 REMARK 465 ASP A 397 REMARK 465 SER A 408 REMARK 465 LYS A 409 REMARK 465 LYS A 410 REMARK 465 ASP A 411 REMARK 465 GLY A 412 REMARK 465 GLU A 413 REMARK 465 LYS A 691 REMARK 465 ASN A 692 REMARK 465 SER A 693 REMARK 465 ARG A 694 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 695 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TRP A 400 CB CG CD1 CD2 NE1 CE2 CE3 REMARK 480 TRP A 400 CZ2 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 451 C2 NAG A 802 1.88 REMARK 500 ND2 ASN A 270 C2 NAG A 801 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 224 140.87 76.64 REMARK 500 ALA A 279 -89.45 -145.43 REMARK 500 ASN A 318 79.60 -111.06 REMARK 500 ASN A 360 -7.40 -142.15 REMARK 500 ASN A 377 70.99 47.50 REMARK 500 GLN A 420 -69.73 -97.93 REMARK 500 LEU A 438 67.18 -109.21 REMARK 500 ASN A 451 -18.95 72.24 REMARK 500 SER A 468 -33.44 -162.75 REMARK 500 GLN A 469 -26.57 77.53 REMARK 500 SER A 478 -159.20 -156.96 REMARK 500 GLN A 480 25.20 -147.43 REMARK 500 ASP A 491 10.00 -160.88 REMARK 500 SER A 496 2.05 -68.73 REMARK 500 ASP A 525 96.09 -169.07 REMARK 500 ALA A 595 -169.21 -117.81 REMARK 500 ASN A 631 45.68 -96.44 REMARK 500 ASP A 641 -7.66 -59.86 REMARK 500 GLN A 649 -117.82 54.25 REMARK 500 ARG A 668 59.53 33.31 REMARK 500 SER A 678 -78.51 -117.10 REMARK 500 ALA A 689 -100.03 40.56 REMARK 500 PRO A 698 -70.14 -92.08 REMARK 500 ARG A 699 135.91 71.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 703 PRO A 704 -59.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2I6Q RELATED DB: PDB DBREF 2I6S A 224 732 UNP P06681 CO2_HUMAN 242 752 SEQADV 2I6S HIS A 216 UNP P06681 EXPRESSION TAG SEQADV 2I6S HIS A 217 UNP P06681 EXPRESSION TAG SEQADV 2I6S HIS A 218 UNP P06681 EXPRESSION TAG SEQADV 2I6S HIS A 219 UNP P06681 EXPRESSION TAG SEQADV 2I6S HIS A 220 UNP P06681 EXPRESSION TAG SEQADV 2I6S HIS A 221 UNP P06681 EXPRESSION TAG SEQADV 2I6S GLY A 222 UNP P06681 CLONING ARTIFACT SEQADV 2I6S SER A 223 UNP P06681 CLONING ARTIFACT SEQRES 1 A 517 HIS HIS HIS HIS HIS HIS GLY SER LYS ILE GLN ILE GLN SEQRES 2 A 517 ARG SER GLY HIS LEU ASN LEU TYR LEU LEU LEU ASP CYS SEQRES 3 A 517 SER GLN SER VAL SER GLU ASN ASP PHE LEU ILE PHE LYS SEQRES 4 A 517 GLU SER ALA SER LEU MET VAL ASP ARG ILE PHE SER PHE SEQRES 5 A 517 GLU ILE ASN VAL SER VAL ALA ILE ILE THR PHE ALA SER SEQRES 6 A 517 GLU PRO LYS VAL LEU MET SER VAL LEU ASN ASP ASN SER SEQRES 7 A 517 ARG ASP MET THR GLU VAL ILE SER SER LEU GLU ASN ALA SEQRES 8 A 517 ASN TYR LYS ASP HIS GLU ASN GLY THR GLY THR ASN THR SEQRES 9 A 517 TYR ALA ALA LEU ASN SER VAL TYR LEU MET MET ASN ASN SEQRES 10 A 517 GLN MET ARG LEU LEU GLY MET GLU THR MET ALA TRP GLN SEQRES 11 A 517 GLU ILE ARG HIS ALA ILE ILE LEU LEU THR ASP GLY LYS SEQRES 12 A 517 SER ASN MET GLY GLY SER PRO LYS THR ALA VAL ASP HIS SEQRES 13 A 517 ILE ARG GLU ILE LEU ASN ILE ASN GLN LYS ARG ASN ASP SEQRES 14 A 517 TYR LEU ASP ILE TYR ALA ILE GLY VAL GLY LYS LEU ASP SEQRES 15 A 517 VAL ASP TRP ARG GLU LEU ASN GLU LEU GLY SER LYS LYS SEQRES 16 A 517 ASP GLY GLU ARG HIS ALA PHE ILE LEU GLN ASP THR LYS SEQRES 17 A 517 ALA LEU HIS GLN VAL PHE GLU HIS MET LEU ASP VAL SER SEQRES 18 A 517 LYS LEU THR ASP THR ILE CYS GLY VAL GLY ASN MET SER SEQRES 19 A 517 ALA ASN ALA SER ASP GLN GLU ARG THR PRO TRP HIS VAL SEQRES 20 A 517 THR ILE LYS PRO LYS SER GLN GLU THR CYS ARG GLY ALA SEQRES 21 A 517 LEU ILE SER ASP GLN TRP VAL LEU THR ALA ALA HIS CYS SEQRES 22 A 517 PHE ARG ASP GLY ASN ASP HIS SER LEU TRP ARG VAL ASN SEQRES 23 A 517 VAL GLY ASP PRO LYS SER GLN TRP GLY LYS GLU PHE LEU SEQRES 24 A 517 ILE GLU LYS ALA VAL ILE SER PRO GLY PHE ASP VAL PHE SEQRES 25 A 517 ALA LYS LYS ASN GLN GLY ILE LEU GLU PHE TYR GLY ASP SEQRES 26 A 517 ASP ILE ALA LEU LEU LYS LEU ALA GLN LYS VAL LYS MET SEQRES 27 A 517 SER THR HIS ALA ARG PRO ILE CYS LEU PRO CYS THR MET SEQRES 28 A 517 GLU ALA ASN LEU ALA LEU ARG ARG PRO GLN GLY SER THR SEQRES 29 A 517 CYS ARG ASP HIS GLU ASN GLU LEU LEU ASN LYS GLN SER SEQRES 30 A 517 VAL PRO ALA HIS PHE VAL ALA LEU ASN GLY SER LYS LEU SEQRES 31 A 517 ASN ILE ASN LEU LYS MET GLY VAL GLU TRP THR SER CYS SEQRES 32 A 517 ALA GLU VAL VAL SER GLN GLU LYS THR MET PHE PRO ASN SEQRES 33 A 517 LEU THR ASP VAL ARG GLU VAL VAL THR ASP GLN PHE LEU SEQRES 34 A 517 CYS SER GLY THR GLN GLU ASP GLU SER PRO CYS LYS GLY SEQRES 35 A 517 GLU SER GLY GLY ALA VAL PHE LEU GLU ARG ARG PHE ARG SEQRES 36 A 517 PHE PHE GLN VAL GLY LEU VAL SER TRP GLY LEU TYR ASN SEQRES 37 A 517 PRO CYS LEU GLY SER ALA ASP LYS ASN SER ARG LYS ARG SEQRES 38 A 517 ALA PRO ARG SER LYS VAL PRO PRO PRO ARG ASP PHE HIS SEQRES 39 A 517 ILE ASN LEU PHE ARG MET GLN PRO TRP LEU ARG GLN HIS SEQRES 40 A 517 LEU GLY ASP VAL LEU ASN PHE LEU PRO LEU MODRES 2I6S ASN A 270 ASN GLYCOSYLATION SITE MODRES 2I6S ASN A 313 ASN GLYCOSYLATION SITE MODRES 2I6S ASN A 447 ASN GLYCOSYLATION SITE MODRES 2I6S ASN A 451 ASN GLYCOSYLATION SITE MODRES 2I6S ASN A 601 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUL B 4 10 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG A 801 14 HET NAG A 802 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 2 NAG 8(C8 H15 N O6) FORMUL 2 BMA 2(C6 H12 O6) FORMUL 2 FUL C6 H12 O5 FORMUL 7 HOH *38(H2 O) HELIX 1 1 SER A 246 PHE A 265 1 20 HELIX 2 2 ASN A 290 ARG A 294 5 5 HELIX 3 3 ASP A 295 ASN A 305 1 11 HELIX 4 4 ASN A 307 GLU A 312 5 6 HELIX 5 5 ASN A 318 GLY A 338 1 21 HELIX 6 6 THR A 341 GLU A 346 1 6 HELIX 7 7 PRO A 365 LEU A 376 1 12 HELIX 8 8 ARG A 382 ASP A 384 5 3 HELIX 9 9 ASP A 399 GLY A 407 1 9 HELIX 10 10 ASP A 421 MET A 432 1 12 HELIX 11 11 SER A 453 THR A 458 1 6 HELIX 12 12 ALA A 485 ARG A 490 5 6 HELIX 13 13 ASP A 494 TRP A 498 5 5 HELIX 14 14 ASP A 525 GLY A 533 5 9 HELIX 15 15 THR A 565 LEU A 572 1 8 HELIX 16 16 THR A 579 LEU A 588 1 10 HELIX 17 17 MET A 611 GLU A 620 1 10 HELIX 18 18 VAL A 621 GLU A 625 5 5 HELIX 19 19 ASP A 634 VAL A 638 5 5 HELIX 20 20 CYS A 655 SER A 659 5 5 HELIX 21 21 MET A 715 GLY A 724 1 10 SHEET 1 A 2 ILE A 225 GLN A 226 0 SHEET 2 A 2 LEU A 433 ASP A 434 1 O ASP A 434 N ILE A 225 SHEET 1 B 6 PRO A 282 MET A 286 0 SHEET 2 B 6 VAL A 271 PHE A 278 -1 N THR A 277 O LYS A 283 SHEET 3 B 6 HIS A 232 ASP A 240 1 N LEU A 235 O SER A 272 SHEET 4 B 6 ILE A 347 LEU A 354 1 O LEU A 354 N LEU A 238 SHEET 5 B 6 LEU A 386 VAL A 393 1 O TYR A 389 N ILE A 351 SHEET 6 B 6 ALA A 416 LEU A 419 1 O LEU A 419 N GLY A 392 SHEET 1 C 7 LYS A 511 PHE A 513 0 SHEET 2 C 7 ARG A 499 VAL A 502 -1 N VAL A 500 O PHE A 513 SHEET 3 C 7 HIS A 461 LYS A 465 -1 N THR A 463 O ASN A 501 SHEET 4 C 7 CYS A 472 LEU A 476 -1 O CYS A 472 N ILE A 464 SHEET 5 C 7 TRP A 481 THR A 484 -1 O LEU A 483 N ALA A 475 SHEET 6 C 7 ALA A 543 LEU A 547 -1 O ALA A 543 N THR A 484 SHEET 7 C 7 ILE A 515 ILE A 520 -1 N GLU A 516 O LYS A 546 SHEET 1 D 2 SER A 592 VAL A 598 0 SHEET 2 D 2 LYS A 604 LYS A 610 -1 O LEU A 609 N VAL A 593 SHEET 1 E 4 PHE A 643 SER A 646 0 SHEET 2 E 4 ASP A 707 ASN A 711 -1 O HIS A 709 N LEU A 644 SHEET 3 E 4 ARG A 670 GLY A 680 -1 N LEU A 676 O ILE A 710 SHEET 4 E 4 ALA A 662 ARG A 667 -1 N ARG A 667 O ARG A 670 SSBOND 1 CYS A 443 CYS A 561 1555 1555 2.04 SSBOND 2 CYS A 472 CYS A 488 1555 1555 2.03 SSBOND 3 CYS A 564 CYS A 580 1555 1555 2.03 SSBOND 4 CYS A 618 CYS A 645 1555 1555 2.03 SSBOND 5 CYS A 655 CYS A 685 1555 1555 2.03 LINK ND2 ASN A 270 C1 NAG A 801 1555 1555 1.44 LINK ND2 ASN A 313 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 447 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 451 C1 NAG A 802 1555 1555 1.44 LINK ND2 ASN A 601 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.46 LINK O6 NAG B 1 C1 FUL B 4 1555 1555 1.44 LINK O3 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 CISPEP 1 GLY A 687 SER A 688 0 5.44 CRYST1 51.160 75.080 71.560 90.00 110.32 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019547 0.000000 0.007238 0.00000 SCALE2 0.000000 0.013319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014902 0.00000