HEADER RNA BINDING PROTEIN, PROTEIN BINDING 31-AUG-06 2I7X TITLE STRUCTURE OF YEAST CPSF-100 (YDH1P) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN CFT2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLEAVAGE FACTOR TWO PROTEIN 2, 105 KDA PROTEIN ASSOCIATED COMPND 5 WITH POLYADENYLATION FACTOR I; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CFT2, YDH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS POLYADENYLATION, METALLO-B-LACTAMASE, PRE-MRNA PROCESSING, ARTEMIS, KEYWDS 2 V(D)J RECOMBINATION, DOUBLE-STRAND BREAK REPAIR, RNA BINDING KEYWDS 3 PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.R.MANDEL,H.ZHANG,D.GEBAUER,L.TONG REVDAT 4 21-FEB-24 2I7X 1 REMARK REVDAT 3 18-OCT-17 2I7X 1 REMARK REVDAT 2 24-FEB-09 2I7X 1 VERSN REVDAT 1 30-JAN-07 2I7X 0 JRNL AUTH C.R.MANDEL,S.KANEKO,H.ZHANG,D.GEBAUER,V.VETHANTHAM, JRNL AUTH 2 J.L.MANLEY,L.TONG JRNL TITL POLYADENYLATION FACTOR CPSF-73 IS THE PRE-MRNA JRNL TITL 2 3'-END-PROCESSING ENDONUCLEASE. JRNL REF NATURE V. 444 953 2006 JRNL REFN ISSN 0028-0836 JRNL PMID 17128255 JRNL DOI 10.1038/NATURE05363 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 459366.600 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 19531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1905 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1511 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE : 0.4010 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 160 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.032 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -13.94000 REMARK 3 B22 (A**2) : -3.62000 REMARK 3 B33 (A**2) : 17.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.30 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.43 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.580 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.720 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.050 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.140 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 31.74 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2I7X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000039249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20806 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4674 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 0.40800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.644 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB THEN SOLVE/RESOLVE, PATSOL, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M AMMONIUM CITRATE, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.81550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.40050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 63.43100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.81550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.40050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.43100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.81550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.40050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.43100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.81550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.40050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.43100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 269 REMARK 465 LYS A 270 REMARK 465 ILE A 271 REMARK 465 ASN A 272 REMARK 465 ALA A 273 REMARK 465 HIS A 274 REMARK 465 THR A 275 REMARK 465 ARG A 389 REMARK 465 ASN A 390 REMARK 465 TRP A 391 REMARK 465 LYS A 392 REMARK 465 THR A 393 REMARK 465 PHE A 394 REMARK 465 PRO A 395 REMARK 465 GLU A 396 REMARK 465 GLU A 423 REMARK 465 ALA A 424 REMARK 465 PHE A 425 REMARK 465 LYS A 426 REMARK 465 VAL A 427 REMARK 465 GLN A 428 REMARK 465 LEU A 429 REMARK 465 LYS A 430 REMARK 465 GLU A 431 REMARK 465 LYS A 432 REMARK 465 LYS A 433 REMARK 465 ARG A 434 REMARK 465 ASP A 435 REMARK 465 ARG A 436 REMARK 465 ASN A 437 REMARK 465 LYS A 438 REMARK 465 LYS A 439 REMARK 465 ILE A 440 REMARK 465 LEU A 441 REMARK 465 LEU A 442 REMARK 465 VAL A 443 REMARK 465 LYS A 444 REMARK 465 ARG A 445 REMARK 465 GLU A 446 REMARK 465 SER A 447 REMARK 465 LYS A 448 REMARK 465 LYS A 449 REMARK 465 LEU A 450 REMARK 465 ALA A 451 REMARK 465 ASN A 452 REMARK 465 GLY A 453 REMARK 465 ASN A 454 REMARK 465 ALA A 455 REMARK 465 ILE A 456 REMARK 465 ILE A 457 REMARK 465 ASP A 458 REMARK 465 ASP A 459 REMARK 465 THR A 460 REMARK 465 ASN A 461 REMARK 465 GLY A 462 REMARK 465 GLU A 463 REMARK 465 ARG A 464 REMARK 465 ALA A 465 REMARK 465 MET A 466 REMARK 465 ARG A 467 REMARK 465 ASN A 468 REMARK 465 GLN A 469 REMARK 465 ASP A 470 REMARK 465 ILE A 471 REMARK 465 LEU A 472 REMARK 465 VAL A 473 REMARK 465 GLU A 474 REMARK 465 ASN A 475 REMARK 465 VAL A 476 REMARK 465 ASN A 477 REMARK 465 GLY A 478 REMARK 465 VAL A 479 REMARK 465 PRO A 480 REMARK 465 PRO A 481 REMARK 465 ILE A 482 REMARK 465 ASP A 483 REMARK 465 HIS A 484 REMARK 465 ILE A 485 REMARK 465 MET A 486 REMARK 465 GLY A 487 REMARK 465 GLY A 488 REMARK 465 ASP A 489 REMARK 465 GLU A 490 REMARK 465 ASP A 491 REMARK 465 ASP A 492 REMARK 465 ASP A 493 REMARK 465 GLU A 494 REMARK 465 GLU A 495 REMARK 465 GLU A 496 REMARK 465 GLU A 497 REMARK 465 ASN A 498 REMARK 465 ASP A 499 REMARK 465 ASN A 500 REMARK 465 LEU A 501 REMARK 465 LEU A 502 REMARK 465 ASN A 503 REMARK 465 LEU A 504 REMARK 465 LEU A 505 REMARK 465 LYS A 506 REMARK 465 ASP A 507 REMARK 465 ASN A 508 REMARK 465 SER A 509 REMARK 465 GLU A 510 REMARK 465 LYS A 511 REMARK 465 SER A 512 REMARK 465 ALA A 513 REMARK 465 ALA A 514 REMARK 465 LYS A 515 REMARK 465 LYS A 516 REMARK 465 ASN A 517 REMARK 465 THR A 518 REMARK 465 GLU A 519 REMARK 465 VAL A 520 REMARK 465 PRO A 521 REMARK 465 VAL A 522 REMARK 465 ASP A 523 REMARK 465 ILE A 524 REMARK 465 ILE A 525 REMARK 465 ILE A 526 REMARK 465 GLN A 527 REMARK 465 PRO A 528 REMARK 465 SER A 529 REMARK 465 ALA A 530 REMARK 465 ALA A 531 REMARK 465 SER A 532 REMARK 465 LYS A 533 REMARK 465 HIS A 534 REMARK 465 LYS A 535 REMARK 465 MET A 536 REMARK 465 PHE A 537 REMARK 465 PRO A 538 REMARK 465 PHE A 539 REMARK 465 ASN A 540 REMARK 465 PRO A 541 REMARK 465 ALA A 542 REMARK 465 LYS A 543 REMARK 465 ILE A 544 REMARK 465 LYS A 545 REMARK 465 LYS A 546 REMARK 465 ASP A 547 REMARK 465 ASP A 548 REMARK 465 TYR A 549 REMARK 465 GLY A 550 REMARK 465 THR A 551 REMARK 465 VAL A 552 REMARK 465 VAL A 553 REMARK 465 ASP A 554 REMARK 465 PHE A 555 REMARK 465 THR A 556 REMARK 465 MET A 557 REMARK 465 PHE A 558 REMARK 465 LEU A 559 REMARK 465 PRO A 560 REMARK 465 ASP A 561 REMARK 465 ASP A 562 REMARK 465 SER A 563 REMARK 465 ASP A 564 REMARK 465 ASN A 565 REMARK 465 VAL A 566 REMARK 465 ASN A 567 REMARK 465 GLN A 568 REMARK 465 ASN A 569 REMARK 465 SER A 570 REMARK 465 ARG A 571 REMARK 465 LYS A 572 REMARK 465 ARG A 573 REMARK 465 PRO A 574 REMARK 465 LEU A 575 REMARK 465 LYS A 576 REMARK 465 ASP A 577 REMARK 465 GLY A 578 REMARK 465 ALA A 579 REMARK 465 LYS A 580 REMARK 465 THR A 581 REMARK 465 THR A 582 REMARK 465 SER A 583 REMARK 465 PRO A 584 REMARK 465 VAL A 585 REMARK 465 ASN A 586 REMARK 465 GLU A 587 REMARK 465 GLU A 588 REMARK 465 ASP A 589 REMARK 465 ASN A 590 REMARK 465 LYS A 591 REMARK 465 ASN A 592 REMARK 465 GLU A 593 REMARK 465 GLU A 594 REMARK 465 GLU A 595 REMARK 465 ASP A 596 REMARK 465 GLY A 597 REMARK 465 TYR A 598 REMARK 465 ASN A 599 REMARK 465 MET A 600 REMARK 465 SER A 601 REMARK 465 ASP A 602 REMARK 465 PRO A 603 REMARK 465 ILE A 604 REMARK 465 SER A 605 REMARK 465 LYS A 606 REMARK 465 ARG A 607 REMARK 465 SER A 608 REMARK 465 LYS A 609 REMARK 465 HIS A 610 REMARK 465 ARG A 611 REMARK 465 ALA A 612 REMARK 465 SER A 613 REMARK 465 ARG A 614 REMARK 465 TYR A 615 REMARK 465 SER A 616 REMARK 465 GLY A 617 REMARK 465 PHE A 618 REMARK 465 SER A 619 REMARK 465 GLY A 620 REMARK 465 THR A 621 REMARK 465 GLY A 622 REMARK 465 GLU A 623 REMARK 465 ALA A 624 REMARK 465 GLU A 625 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 335 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 129.65 161.21 REMARK 500 ASP A 30 73.21 50.44 REMARK 500 ARG A 84 -41.35 -157.85 REMARK 500 SER A 171 -56.84 -124.17 REMARK 500 ASP A 195 -152.01 -107.34 REMARK 500 THR A 197 -2.28 -141.15 REMARK 500 SER A 202 -72.56 -42.30 REMARK 500 LEU A 204 -8.27 75.04 REMARK 500 ARG A 206 79.10 -112.51 REMARK 500 ALA A 209 150.62 173.92 REMARK 500 SER A 240 -127.41 58.87 REMARK 500 GLU A 267 37.98 -165.28 REMARK 500 ARG A 286 -121.91 50.87 REMARK 500 ARG A 311 -157.71 -79.51 REMARK 500 ASN A 312 -159.22 -67.91 REMARK 500 ASN A 313 36.33 -78.37 REMARK 500 ASN A 329 22.02 -67.36 REMARK 500 PRO A 335 -72.80 -56.44 REMARK 500 SER A 337 140.53 -39.76 REMARK 500 LYS A 338 135.67 -179.40 REMARK 500 GLU A 344 42.97 -61.57 REMARK 500 ASP A 404 63.27 -156.16 REMARK 500 LYS A 419 41.62 -71.62 REMARK 500 GLU A 420 112.24 64.90 REMARK 500 PHE A 627 -21.10 -172.65 REMARK 500 LYS A 637 -15.28 -162.40 REMARK 500 LYS A 677 56.38 -69.70 REMARK 500 SER A 684 -158.10 -90.38 REMARK 500 ALA A 685 -149.47 39.84 REMARK 500 GLN A 688 -22.56 -37.78 REMARK 500 ASN A 691 101.74 -49.79 REMARK 500 GLU A 693 -71.65 -53.97 REMARK 500 LYS A 701 36.79 -67.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2I7T RELATED DB: PDB REMARK 900 RELATED ID: 2I7V RELATED DB: PDB DBREF 2I7X A 1 717 UNP Q12102 CFT2_YEAST 1 717 SEQRES 1 A 717 MET THR TYR LYS TYR ASN CYS CYS ASP ASP GLY SER GLY SEQRES 2 A 717 THR THR VAL GLY SER VAL VAL ARG PHE ASP ASN VAL THR SEQRES 3 A 717 LEU LEU ILE ASP PRO GLY TRP ASN PRO SER LYS VAL SER SEQRES 4 A 717 TYR GLU GLN CYS ILE LYS TYR TRP GLU LYS VAL ILE PRO SEQRES 5 A 717 GLU ILE ASP VAL ILE ILE LEU SER GLN PRO THR ILE GLU SEQRES 6 A 717 CYS LEU GLY ALA HIS SER LEU LEU TYR TYR ASN PHE THR SEQRES 7 A 717 SER HIS PHE ILE SER ARG ILE GLN VAL TYR ALA THR LEU SEQRES 8 A 717 PRO VAL ILE ASN LEU GLY ARG VAL SER THR ILE ASP SER SEQRES 9 A 717 TYR ALA SER ALA GLY VAL ILE GLY PRO TYR ASP THR ASN SEQRES 10 A 717 LYS LEU ASP LEU GLU ASP ILE GLU ILE SER PHE ASP HIS SEQRES 11 A 717 ILE VAL PRO LEU LYS TYR SER GLN LEU VAL ASP LEU ARG SEQRES 12 A 717 SER ARG TYR ASP GLY LEU THR LEU LEU ALA TYR ASN ALA SEQRES 13 A 717 GLY VAL CYS PRO GLY GLY SER ILE TRP CYS ILE SER THR SEQRES 14 A 717 TYR SER GLU LYS LEU VAL TYR ALA LYS ARG TRP ASN HIS SEQRES 15 A 717 THR ARG ASP ASN ILE LEU ASN ALA ALA SER ILE LEU ASP SEQRES 16 A 717 ALA THR GLY LYS PRO LEU SER THR LEU MET ARG PRO SER SEQRES 17 A 717 ALA ILE ILE THR THR LEU ASP ARG PHE GLY SER SER GLN SEQRES 18 A 717 PRO PHE LYS LYS ARG SER LYS ILE PHE LYS ASP THR LEU SEQRES 19 A 717 LYS LYS GLY LEU SER SER ASP GLY SER VAL ILE ILE PRO SEQRES 20 A 717 VAL ASP MET SER GLY LYS PHE LEU ASP LEU PHE THR GLN SEQRES 21 A 717 VAL HIS GLU LEU LEU PHE GLU SER THR LYS ILE ASN ALA SEQRES 22 A 717 HIS THR GLN VAL PRO VAL LEU ILE LEU SER TYR ALA ARG SEQRES 23 A 717 GLY ARG THR LEU THR TYR ALA LYS SER MET LEU GLU TRP SEQRES 24 A 717 LEU SER PRO SER LEU LEU LYS THR TRP GLU ASN ARG ASN SEQRES 25 A 717 ASN THR SER PRO PHE GLU ILE GLY SER ARG ILE LYS ILE SEQRES 26 A 717 ILE ALA PRO ASN GLU LEU SER LYS TYR PRO GLY SER LYS SEQRES 27 A 717 ILE CYS PHE VAL SER GLU VAL GLY ALA LEU ILE ASN GLU SEQRES 28 A 717 VAL ILE ILE LYS VAL GLY ASN SER GLU LYS THR THR LEU SEQRES 29 A 717 ILE LEU THR LYS PRO SER PHE GLU CYS ALA SER SER LEU SEQRES 30 A 717 ASP LYS ILE LEU GLU ILE VAL GLU GLN ASP GLU ARG ASN SEQRES 31 A 717 TRP LYS THR PHE PRO GLU ASP GLY LYS SER PHE LEU CYS SEQRES 32 A 717 ASP ASN TYR ILE SER ILE ASP THR ILE LYS GLU GLU PRO SEQRES 33 A 717 LEU SER LYS GLU GLU THR GLU ALA PHE LYS VAL GLN LEU SEQRES 34 A 717 LYS GLU LYS LYS ARG ASP ARG ASN LYS LYS ILE LEU LEU SEQRES 35 A 717 VAL LYS ARG GLU SER LYS LYS LEU ALA ASN GLY ASN ALA SEQRES 36 A 717 ILE ILE ASP ASP THR ASN GLY GLU ARG ALA MET ARG ASN SEQRES 37 A 717 GLN ASP ILE LEU VAL GLU ASN VAL ASN GLY VAL PRO PRO SEQRES 38 A 717 ILE ASP HIS ILE MET GLY GLY ASP GLU ASP ASP ASP GLU SEQRES 39 A 717 GLU GLU GLU ASN ASP ASN LEU LEU ASN LEU LEU LYS ASP SEQRES 40 A 717 ASN SER GLU LYS SER ALA ALA LYS LYS ASN THR GLU VAL SEQRES 41 A 717 PRO VAL ASP ILE ILE ILE GLN PRO SER ALA ALA SER LYS SEQRES 42 A 717 HIS LYS MET PHE PRO PHE ASN PRO ALA LYS ILE LYS LYS SEQRES 43 A 717 ASP ASP TYR GLY THR VAL VAL ASP PHE THR MET PHE LEU SEQRES 44 A 717 PRO ASP ASP SER ASP ASN VAL ASN GLN ASN SER ARG LYS SEQRES 45 A 717 ARG PRO LEU LYS ASP GLY ALA LYS THR THR SER PRO VAL SEQRES 46 A 717 ASN GLU GLU ASP ASN LYS ASN GLU GLU GLU ASP GLY TYR SEQRES 47 A 717 ASN MET SER ASP PRO ILE SER LYS ARG SER LYS HIS ARG SEQRES 48 A 717 ALA SER ARG TYR SER GLY PHE SER GLY THR GLY GLU ALA SEQRES 49 A 717 GLU ASN PHE ASP ASN LEU ASP TYR LEU LYS ILE ASP LYS SEQRES 50 A 717 THR LEU SER LYS ARG THR ILE SER THR VAL ASN VAL GLN SEQRES 51 A 717 LEU LYS CYS SER VAL VAL ILE LEU ASN LEU GLN SER LEU SEQRES 52 A 717 VAL ASP GLN ARG SER ALA SER ILE ILE TRP PRO SER LEU SEQRES 53 A 717 LYS SER ARG LYS ILE VAL LEU SER ALA PRO LYS GLN ILE SEQRES 54 A 717 GLN ASN GLU GLU ILE THR ALA LYS LEU ILE LYS LYS ASN SEQRES 55 A 717 ILE GLU VAL VAL ASN MET PRO LEU ASN LYS ILE VAL GLU SEQRES 56 A 717 PHE SER FORMUL 2 HOH *148(H2 O) HELIX 1 1 SER A 39 LYS A 49 1 11 HELIX 2 2 VAL A 50 ILE A 54 5 5 HELIX 3 3 THR A 63 GLY A 68 1 6 HELIX 4 4 ALA A 69 PHE A 77 1 9 HELIX 5 5 PHE A 77 ARG A 84 1 8 HELIX 6 6 LEU A 91 ALA A 108 1 18 HELIX 7 7 ASP A 120 HIS A 130 1 11 HELIX 8 8 PRO A 222 LEU A 238 1 17 HELIX 9 9 GLY A 252 PHE A 266 1 15 HELIX 10 10 GLY A 287 SER A 295 1 9 HELIX 11 11 MET A 296 LEU A 300 5 5 HELIX 12 12 SER A 301 ASN A 310 1 10 HELIX 13 13 ALA A 327 TYR A 334 5 8 HELIX 14 14 VAL A 345 GLY A 357 1 13 HELIX 15 15 ALA A 374 GLN A 386 1 13 HELIX 16 16 LEU A 630 LYS A 634 5 5 HELIX 17 17 ASP A 665 TRP A 673 1 9 HELIX 18 18 PRO A 674 LEU A 676 5 3 HELIX 19 19 PRO A 686 GLN A 690 5 5 HELIX 20 20 ASN A 691 LYS A 701 1 11 SHEET 1 A 7 VAL A 132 LEU A 134 0 SHEET 2 A 7 GLN A 86 THR A 90 1 N VAL A 87 O VAL A 132 SHEET 3 A 7 VAL A 56 ILE A 58 1 N ILE A 57 O GLN A 86 SHEET 4 A 7 VAL A 25 ILE A 29 1 N LEU A 28 O VAL A 56 SHEET 5 A 7 SER A 18 PHE A 22 -1 N SER A 18 O ILE A 29 SHEET 6 A 7 TYR A 3 CYS A 7 -1 N LYS A 4 O ARG A 21 SHEET 7 A 7 VAL A 714 PHE A 716 -1 O PHE A 716 N TYR A 3 SHEET 1 B 7 VAL A 140 LEU A 142 0 SHEET 2 B 7 LEU A 149 ASN A 155 -1 O LEU A 149 N LEU A 142 SHEET 3 B 7 SER A 163 SER A 168 -1 O CYS A 166 N LEU A 152 SHEET 4 B 7 LYS A 173 ALA A 177 -1 O TYR A 176 N TRP A 165 SHEET 5 B 7 ALA A 209 THR A 212 1 O ILE A 211 N VAL A 175 SHEET 6 B 7 LYS A 680 LEU A 683 1 O VAL A 682 N ILE A 210 SHEET 7 B 7 GLU A 704 ASN A 707 1 O VAL A 706 N LEU A 683 SHEET 1 C 7 ILE A 323 ILE A 325 0 SHEET 2 C 7 VAL A 279 LEU A 282 1 N ILE A 281 O LYS A 324 SHEET 3 C 7 LYS A 338 SER A 343 1 O PHE A 341 N LEU A 280 SHEET 4 C 7 SER A 243 VAL A 248 1 N ILE A 246 O CYS A 340 SHEET 5 C 7 THR A 362 LEU A 366 1 O THR A 363 N SER A 243 SHEET 6 C 7 SER A 654 ILE A 657 1 O SER A 654 N LEU A 364 SHEET 7 C 7 PHE A 401 LEU A 402 -1 N PHE A 401 O VAL A 655 SHEET 1 D 2 ASN A 405 PRO A 416 0 SHEET 2 D 2 SER A 640 LEU A 651 -1 O LEU A 651 N ASN A 405 CRYST1 75.631 122.801 126.862 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007883 0.00000