data_2I9W # _entry.id 2I9W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2I9W pdb_00002i9w 10.2210/pdb2i9w/pdb RCSB RCSB039320 ? ? WWPDB D_1000039320 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 368209 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2I9W _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-09-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (YP_265345.1) from Psychrobacter Arcticum 273-4 at 1.75 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2I9W _cell.length_a 41.490 _cell.length_b 54.690 _cell.length_c 83.880 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2I9W _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 21009.363 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 127 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)LFSIQTCPCQINPALNAVSTPLLYQDCCQPYHDGLYNQEVEDSDAIRADTAEHL(MSE)RTRYSAFVLVKPEYI VKTTLPAQQDLLDIKAIENWAKETDWAGLEVVAHTPKLSKRHAQVEFKAYFKTPDGLQAHHELSTFVKIKNKANSDASWY FLDPTVS(MSE)SVTQKQPCICGSGEKFKRCCG(MSE)YI ; _entity_poly.pdbx_seq_one_letter_code_can ;GMLFSIQTCPCQINPALNAVSTPLLYQDCCQPYHDGLYNQEVEDSDAIRADTAEHLMRTRYSAFVLVKPEYIVKTTLPAQ QDLLDIKAIENWAKETDWAGLEVVAHTPKLSKRHAQVEFKAYFKTPDGLQAHHELSTFVKIKNKANSDASWYFLDPTVSM SVTQKQPCICGSGEKFKRCCGMYI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 368209 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LEU n 1 4 PHE n 1 5 SER n 1 6 ILE n 1 7 GLN n 1 8 THR n 1 9 CYS n 1 10 PRO n 1 11 CYS n 1 12 GLN n 1 13 ILE n 1 14 ASN n 1 15 PRO n 1 16 ALA n 1 17 LEU n 1 18 ASN n 1 19 ALA n 1 20 VAL n 1 21 SER n 1 22 THR n 1 23 PRO n 1 24 LEU n 1 25 LEU n 1 26 TYR n 1 27 GLN n 1 28 ASP n 1 29 CYS n 1 30 CYS n 1 31 GLN n 1 32 PRO n 1 33 TYR n 1 34 HIS n 1 35 ASP n 1 36 GLY n 1 37 LEU n 1 38 TYR n 1 39 ASN n 1 40 GLN n 1 41 GLU n 1 42 VAL n 1 43 GLU n 1 44 ASP n 1 45 SER n 1 46 ASP n 1 47 ALA n 1 48 ILE n 1 49 ARG n 1 50 ALA n 1 51 ASP n 1 52 THR n 1 53 ALA n 1 54 GLU n 1 55 HIS n 1 56 LEU n 1 57 MSE n 1 58 ARG n 1 59 THR n 1 60 ARG n 1 61 TYR n 1 62 SER n 1 63 ALA n 1 64 PHE n 1 65 VAL n 1 66 LEU n 1 67 VAL n 1 68 LYS n 1 69 PRO n 1 70 GLU n 1 71 TYR n 1 72 ILE n 1 73 VAL n 1 74 LYS n 1 75 THR n 1 76 THR n 1 77 LEU n 1 78 PRO n 1 79 ALA n 1 80 GLN n 1 81 GLN n 1 82 ASP n 1 83 LEU n 1 84 LEU n 1 85 ASP n 1 86 ILE n 1 87 LYS n 1 88 ALA n 1 89 ILE n 1 90 GLU n 1 91 ASN n 1 92 TRP n 1 93 ALA n 1 94 LYS n 1 95 GLU n 1 96 THR n 1 97 ASP n 1 98 TRP n 1 99 ALA n 1 100 GLY n 1 101 LEU n 1 102 GLU n 1 103 VAL n 1 104 VAL n 1 105 ALA n 1 106 HIS n 1 107 THR n 1 108 PRO n 1 109 LYS n 1 110 LEU n 1 111 SER n 1 112 LYS n 1 113 ARG n 1 114 HIS n 1 115 ALA n 1 116 GLN n 1 117 VAL n 1 118 GLU n 1 119 PHE n 1 120 LYS n 1 121 ALA n 1 122 TYR n 1 123 PHE n 1 124 LYS n 1 125 THR n 1 126 PRO n 1 127 ASP n 1 128 GLY n 1 129 LEU n 1 130 GLN n 1 131 ALA n 1 132 HIS n 1 133 HIS n 1 134 GLU n 1 135 LEU n 1 136 SER n 1 137 THR n 1 138 PHE n 1 139 VAL n 1 140 LYS n 1 141 ILE n 1 142 LYS n 1 143 ASN n 1 144 LYS n 1 145 ALA n 1 146 ASN n 1 147 SER n 1 148 ASP n 1 149 ALA n 1 150 SER n 1 151 TRP n 1 152 TYR n 1 153 PHE n 1 154 LEU n 1 155 ASP n 1 156 PRO n 1 157 THR n 1 158 VAL n 1 159 SER n 1 160 MSE n 1 161 SER n 1 162 VAL n 1 163 THR n 1 164 GLN n 1 165 LYS n 1 166 GLN n 1 167 PRO n 1 168 CYS n 1 169 ILE n 1 170 CYS n 1 171 GLY n 1 172 SER n 1 173 GLY n 1 174 GLU n 1 175 LYS n 1 176 PHE n 1 177 LYS n 1 178 ARG n 1 179 CYS n 1 180 CYS n 1 181 GLY n 1 182 MSE n 1 183 TYR n 1 184 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Psychrobacter _entity_src_gen.pdbx_gene_src_gene YP_265345.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Psychrobacter arcticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 334543 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q4FPZ7_PSYAR _struct_ref.pdbx_db_accession Q4FPZ7 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2I9W _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 184 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4FPZ7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 183 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2I9W GLY A 1 ? UNP Q4FPZ7 ? ? 'expression tag' 0 1 1 2I9W MSE A 2 ? UNP Q4FPZ7 MET 1 'modified residue' 1 2 1 2I9W MSE A 57 ? UNP Q4FPZ7 MET 56 'modified residue' 56 3 1 2I9W MSE A 160 ? UNP Q4FPZ7 MET 159 'modified residue' 159 4 1 2I9W MSE A 182 ? UNP Q4FPZ7 MET 181 'modified residue' 181 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2I9W # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 44.52 _exptl_crystal.density_Matthews 2.23 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M MgCl2, 20.0% PEG-8000, 0.1M TRIS, pH 8.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.details 'Adjustable focusing mirrors in K-B geometry' _diffrn_detector.pdbx_collection_date 2006-08-11 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Double Crystal Monochrometer' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.94926 1.0 2 0.97939 1.0 3 0.97925 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_wavelength_list 0.94926,0.97939,0.97925 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 2I9W _reflns.d_resolution_high 1.750 _reflns.d_resolution_low 29.501 _reflns.number_obs 19754 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_netI_over_sigmaI 9.190 _reflns.percent_possible_obs 93.900 _reflns.B_iso_Wilson_estimate 27.791 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.75 1.81 5713 ? ? 0.361 2.2 ? ? ? ? 3015 83.80 1 1 1.81 1.89 6838 ? ? 0.303 2.7 ? ? ? ? 3605 88.00 2 1 1.89 1.97 5933 ? ? 0.229 3.5 ? ? ? ? 3130 90.20 3 1 1.97 2.07 6339 ? ? 0.172 4.4 ? ? ? ? 3340 93.60 4 1 2.07 2.20 6776 ? ? 0.121 6.2 ? ? ? ? 3590 95.50 5 1 2.20 2.37 6831 ? ? 0.097 7.6 ? ? ? ? 3618 96.80 6 1 2.37 2.61 6949 ? ? 0.07 9.8 ? ? ? ? 3664 97.10 7 1 2.61 2.99 6896 ? ? 0.059 13.1 ? ? ? ? 3662 97.60 8 1 2.99 ? 6813 ? ? 0.043 17.6 ? ? ? ? 3650 98.30 9 1 # _refine.entry_id 2I9W _refine.ls_d_res_high 1.750 _refine.ls_d_res_low 29.501 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.230 _refine.ls_number_reflns_obs 19707 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;(1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2) ZN200 IS COORDINATED TO THE SIDE CHAINS OF CYS 8, 10, 28 AND 29. ZN201 IS COORDINATED TO THE SIDE CHAINS OF CYS 167, 169, 178 AND 179. ZN IS MODELED BASED ON ELECTRON DENSITY AND GEOMETRY, AND IS SUPPORTED BY X-RAY FLOURESCENCE EXPERIMENTS. (3) A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. (4) ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. (5) THE RESIDUES IN THE DISORDERED REGIONS OF A40-45 WERE NOT MODELLED. (6) THERE ARE UNMODELED DENSITIES NEAR A132 AND A56. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.238 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1007 _refine.B_iso_mean 20.135 _refine.aniso_B[1][1] 1.600 _refine.aniso_B[2][2] -0.260 _refine.aniso_B[3][3] -1.340 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.pdbx_overall_ESU_R 0.119 _refine.pdbx_overall_ESU_R_Free 0.121 _refine.overall_SU_ML 0.083 _refine.overall_SU_B 4.648 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.19392 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work 0.194 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1370 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 1500 _refine_hist.d_res_high 1.750 _refine_hist.d_res_low 29.501 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1429 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 940 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1950 1.522 1.943 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2307 0.903 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 180 5.811 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 59 37.610 24.068 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 230 13.377 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 7.590 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 220 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1586 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 284 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 249 0.235 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 905 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 680 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 699 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 79 0.131 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 18 0.289 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 34 0.269 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 7 0.125 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 967 2.096 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 352 0.505 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1454 2.978 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 593 4.796 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 493 6.423 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.751 _refine_ls_shell.d_res_low 1.797 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.880 _refine_ls_shell.number_reflns_R_work 1350 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1418 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2I9W _struct.title 'Crystal structure of a sec-c motif containing protein (psyc_2064) from psychrobacter arcticus at 1.75 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Cystatin-like fold, sec-c motif fold, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, metal binding protein ; _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.entry_id 2I9W # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MSE A 2 ? GLN A 7 ? MSE A 1 GLN A 6 5 ? 6 HELX_P HELX_P2 2 CYS A 9 ? ILE A 13 ? CYS A 8 ILE A 12 5 ? 5 HELX_P HELX_P3 3 LEU A 25 ? CYS A 29 ? LEU A 24 CYS A 28 5 ? 5 HELX_P HELX_P4 4 CYS A 30 ? GLN A 40 ? CYS A 29 GLN A 39 1 ? 11 HELX_P HELX_P5 5 THR A 52 ? VAL A 67 ? THR A 51 VAL A 66 1 ? 16 HELX_P HELX_P6 6 LYS A 68 ? THR A 75 ? LYS A 67 THR A 74 1 ? 8 HELX_P HELX_P7 7 LEU A 77 ? LEU A 84 ? LEU A 76 LEU A 83 5 ? 8 HELX_P HELX_P8 8 ASP A 85 ? THR A 96 ? ASP A 84 THR A 95 1 ? 12 HELX_P HELX_P9 9 LYS A 175 ? TYR A 183 ? LYS A 174 TYR A 182 5 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A LEU 3 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A LEU 56 C ? ? ? 1_555 A MSE 57 N ? ? A LEU 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A MSE 57 C ? ? ? 1_555 A ARG 58 N ? ? A MSE 56 A ARG 57 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale4 covale both ? A SER 159 C ? ? ? 1_555 A MSE 160 N ? ? A SER 158 A MSE 159 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A MSE 160 C ? ? ? 1_555 A SER 161 N ? ? A MSE 159 A SER 160 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale6 covale both ? A GLY 181 C ? ? ? 1_555 A MSE 182 N ? ? A GLY 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale7 covale both ? A MSE 182 C ? ? ? 1_555 A TYR 183 N ? ? A MSE 181 A TYR 182 1_555 ? ? ? ? ? ? ? 1.327 ? ? metalc1 metalc ? ? A CYS 9 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 8 A ZN 200 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc2 metalc ? ? A CYS 11 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 10 A ZN 200 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc3 metalc ? ? A CYS 29 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 28 A ZN 200 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc4 metalc ? ? A CYS 30 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 29 A ZN 200 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc5 metalc ? ? A CYS 168 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 167 A ZN 201 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc6 metalc ? ? A CYS 170 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 169 A ZN 201 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc7 metalc ? ? A CYS 179 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 178 A ZN 201 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc8 metalc ? ? A CYS 180 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 179 A ZN 201 1_555 ? ? ? ? ? ? ? 2.373 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 97 ? THR A 107 ? ASP A 96 THR A 106 A 2 HIS A 114 ? THR A 125 ? HIS A 113 THR A 124 A 3 GLY A 128 ? LYS A 142 ? GLY A 127 LYS A 141 A 4 ALA A 149 ? PHE A 153 ? ALA A 148 PHE A 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 107 ? N THR A 106 O GLN A 116 ? O GLN A 115 A 2 3 N PHE A 123 ? N PHE A 122 O GLN A 130 ? O GLN A 129 A 3 4 N VAL A 139 ? N VAL A 138 O TYR A 152 ? O TYR A 151 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 200 ? 4 'BINDING SITE FOR RESIDUE ZN A 200' AC2 Software A ZN 201 ? 4 'BINDING SITE FOR RESIDUE ZN A 201' AC3 Software A CL 202 ? 2 'BINDING SITE FOR RESIDUE CL A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 9 ? CYS A 8 . ? 1_555 ? 2 AC1 4 CYS A 11 ? CYS A 10 . ? 1_555 ? 3 AC1 4 CYS A 29 ? CYS A 28 . ? 1_555 ? 4 AC1 4 CYS A 30 ? CYS A 29 . ? 1_555 ? 5 AC2 4 CYS A 168 ? CYS A 167 . ? 1_555 ? 6 AC2 4 CYS A 170 ? CYS A 169 . ? 1_555 ? 7 AC2 4 CYS A 179 ? CYS A 178 . ? 1_555 ? 8 AC2 4 CYS A 180 ? CYS A 179 . ? 1_555 ? 9 AC3 2 SER A 161 ? SER A 160 . ? 1_555 ? 10 AC3 2 LYS A 175 ? LYS A 174 . ? 4_565 ? # _atom_sites.entry_id 2I9W _atom_sites.fract_transf_matrix[1][1] 0.02410 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01829 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LEU 3 2 2 LEU LEU A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 CYS 9 8 8 CYS CYS A . n A 1 10 PRO 10 9 9 PRO PRO A . n A 1 11 CYS 11 10 10 CYS CYS A . n A 1 12 GLN 12 11 11 GLN GLN A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 THR 22 21 21 THR THR A . n A 1 23 PRO 23 22 22 PRO PRO A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 TYR 26 25 25 TYR TYR A . n A 1 27 GLN 27 26 26 GLN GLN A . n A 1 28 ASP 28 27 27 ASP ASP A . n A 1 29 CYS 29 28 28 CYS CYS A . n A 1 30 CYS 30 29 29 CYS CYS A . n A 1 31 GLN 31 30 30 GLN GLN A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 TYR 33 32 32 TYR TYR A . n A 1 34 HIS 34 33 33 HIS HIS A . n A 1 35 ASP 35 34 34 ASP ASP A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 TYR 38 37 37 TYR TYR A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 GLN 40 39 39 GLN GLN A . n A 1 41 GLU 41 40 ? ? ? A . n A 1 42 VAL 42 41 ? ? ? A . n A 1 43 GLU 43 42 ? ? ? A . n A 1 44 ASP 44 43 ? ? ? A . n A 1 45 SER 45 44 ? ? ? A . n A 1 46 ASP 46 45 ? ? ? A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 GLU 54 53 53 GLU GLU A . n A 1 55 HIS 55 54 54 HIS HIS A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 MSE 57 56 56 MSE MSE A . n A 1 58 ARG 58 57 57 ARG ARG A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 TYR 61 60 60 TYR TYR A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 PHE 64 63 63 PHE PHE A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 PRO 69 68 68 PRO PRO A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 TYR 71 70 70 TYR TYR A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 PRO 78 77 77 PRO PRO A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 ASP 82 81 81 ASP ASP A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 ILE 86 85 85 ILE ILE A . n A 1 87 LYS 87 86 86 LYS LYS A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 ILE 89 88 88 ILE ILE A . n A 1 90 GLU 90 89 89 GLU GLU A . n A 1 91 ASN 91 90 90 ASN ASN A . n A 1 92 TRP 92 91 91 TRP TRP A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 TRP 98 97 97 TRP TRP A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 VAL 103 102 102 VAL VAL A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 HIS 106 105 105 HIS HIS A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 LYS 109 108 108 LYS LYS A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 SER 111 110 110 SER SER A . n A 1 112 LYS 112 111 111 LYS LYS A . n A 1 113 ARG 113 112 112 ARG ARG A . n A 1 114 HIS 114 113 113 HIS HIS A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 GLN 116 115 115 GLN GLN A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 GLU 118 117 117 GLU GLU A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 TYR 122 121 121 TYR TYR A . n A 1 123 PHE 123 122 122 PHE PHE A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 THR 125 124 124 THR THR A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 GLY 128 127 127 GLY GLY A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 HIS 132 131 131 HIS HIS A . n A 1 133 HIS 133 132 132 HIS HIS A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 THR 137 136 136 THR THR A . n A 1 138 PHE 138 137 137 PHE PHE A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 LYS 140 139 139 LYS LYS A . n A 1 141 ILE 141 140 140 ILE ILE A . n A 1 142 LYS 142 141 141 LYS LYS A . n A 1 143 ASN 143 142 142 ASN ASN A . n A 1 144 LYS 144 143 143 LYS LYS A . n A 1 145 ALA 145 144 144 ALA ALA A . n A 1 146 ASN 146 145 145 ASN ASN A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 SER 150 149 149 SER SER A . n A 1 151 TRP 151 150 150 TRP TRP A . n A 1 152 TYR 152 151 151 TYR TYR A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 PRO 156 155 155 PRO PRO A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 VAL 158 157 157 VAL VAL A . n A 1 159 SER 159 158 158 SER SER A . n A 1 160 MSE 160 159 159 MSE MSE A . n A 1 161 SER 161 160 160 SER SER A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 THR 163 162 162 THR THR A . n A 1 164 GLN 164 163 163 GLN GLN A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 GLN 166 165 165 GLN GLN A . n A 1 167 PRO 167 166 166 PRO PRO A . n A 1 168 CYS 168 167 167 CYS CYS A . n A 1 169 ILE 169 168 168 ILE ILE A . n A 1 170 CYS 170 169 169 CYS CYS A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 SER 172 171 171 SER SER A . n A 1 173 GLY 173 172 172 GLY GLY A . n A 1 174 GLU 174 173 173 GLU GLU A . n A 1 175 LYS 175 174 174 LYS LYS A . n A 1 176 PHE 176 175 175 PHE PHE A . n A 1 177 LYS 177 176 176 LYS LYS A . n A 1 178 ARG 178 177 177 ARG ARG A . n A 1 179 CYS 179 178 178 CYS CYS A . n A 1 180 CYS 180 179 179 CYS CYS A . n A 1 181 GLY 181 180 180 GLY GLY A . n A 1 182 MSE 182 181 181 MSE MSE A . n A 1 183 TYR 183 182 182 TYR TYR A . n A 1 184 ILE 184 183 183 ILE ILE A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 200 200 ZN ZN A . C 2 ZN 1 201 201 ZN ZN A . D 3 CL 1 202 1 CL CL A . E 4 HOH 1 203 2 HOH HOH A . E 4 HOH 2 204 3 HOH HOH A . E 4 HOH 3 205 4 HOH HOH A . E 4 HOH 4 206 5 HOH HOH A . E 4 HOH 5 207 6 HOH HOH A . E 4 HOH 6 208 7 HOH HOH A . E 4 HOH 7 209 8 HOH HOH A . E 4 HOH 8 210 9 HOH HOH A . E 4 HOH 9 211 10 HOH HOH A . E 4 HOH 10 212 11 HOH HOH A . E 4 HOH 11 213 12 HOH HOH A . E 4 HOH 12 214 13 HOH HOH A . E 4 HOH 13 215 14 HOH HOH A . E 4 HOH 14 216 15 HOH HOH A . E 4 HOH 15 217 16 HOH HOH A . E 4 HOH 16 218 17 HOH HOH A . E 4 HOH 17 219 18 HOH HOH A . E 4 HOH 18 220 19 HOH HOH A . E 4 HOH 19 221 20 HOH HOH A . E 4 HOH 20 222 21 HOH HOH A . E 4 HOH 21 223 22 HOH HOH A . E 4 HOH 22 224 23 HOH HOH A . E 4 HOH 23 225 24 HOH HOH A . E 4 HOH 24 226 25 HOH HOH A . E 4 HOH 25 227 26 HOH HOH A . E 4 HOH 26 228 27 HOH HOH A . E 4 HOH 27 229 28 HOH HOH A . E 4 HOH 28 230 29 HOH HOH A . E 4 HOH 29 231 30 HOH HOH A . E 4 HOH 30 232 31 HOH HOH A . E 4 HOH 31 233 32 HOH HOH A . E 4 HOH 32 234 33 HOH HOH A . E 4 HOH 33 235 34 HOH HOH A . E 4 HOH 34 236 35 HOH HOH A . E 4 HOH 35 237 36 HOH HOH A . E 4 HOH 36 238 37 HOH HOH A . E 4 HOH 37 239 38 HOH HOH A . E 4 HOH 38 240 39 HOH HOH A . E 4 HOH 39 241 40 HOH HOH A . E 4 HOH 40 242 41 HOH HOH A . E 4 HOH 41 243 42 HOH HOH A . E 4 HOH 42 244 43 HOH HOH A . E 4 HOH 43 245 44 HOH HOH A . E 4 HOH 44 246 45 HOH HOH A . E 4 HOH 45 247 46 HOH HOH A . E 4 HOH 46 248 47 HOH HOH A . E 4 HOH 47 249 48 HOH HOH A . E 4 HOH 48 250 49 HOH HOH A . E 4 HOH 49 251 50 HOH HOH A . E 4 HOH 50 252 51 HOH HOH A . E 4 HOH 51 253 52 HOH HOH A . E 4 HOH 52 254 53 HOH HOH A . E 4 HOH 53 255 54 HOH HOH A . E 4 HOH 54 256 55 HOH HOH A . E 4 HOH 55 257 56 HOH HOH A . E 4 HOH 56 258 57 HOH HOH A . E 4 HOH 57 259 58 HOH HOH A . E 4 HOH 58 260 59 HOH HOH A . E 4 HOH 59 261 60 HOH HOH A . E 4 HOH 60 262 61 HOH HOH A . E 4 HOH 61 263 62 HOH HOH A . E 4 HOH 62 264 63 HOH HOH A . E 4 HOH 63 265 64 HOH HOH A . E 4 HOH 64 266 65 HOH HOH A . E 4 HOH 65 267 66 HOH HOH A . E 4 HOH 66 268 67 HOH HOH A . E 4 HOH 67 269 68 HOH HOH A . E 4 HOH 68 270 69 HOH HOH A . E 4 HOH 69 271 70 HOH HOH A . E 4 HOH 70 272 71 HOH HOH A . E 4 HOH 71 273 72 HOH HOH A . E 4 HOH 72 274 73 HOH HOH A . E 4 HOH 73 275 74 HOH HOH A . E 4 HOH 74 276 75 HOH HOH A . E 4 HOH 75 277 76 HOH HOH A . E 4 HOH 76 278 77 HOH HOH A . E 4 HOH 77 279 78 HOH HOH A . E 4 HOH 78 280 79 HOH HOH A . E 4 HOH 79 281 80 HOH HOH A . E 4 HOH 80 282 81 HOH HOH A . E 4 HOH 81 283 82 HOH HOH A . E 4 HOH 82 284 83 HOH HOH A . E 4 HOH 83 285 84 HOH HOH A . E 4 HOH 84 286 85 HOH HOH A . E 4 HOH 85 287 86 HOH HOH A . E 4 HOH 86 288 87 HOH HOH A . E 4 HOH 87 289 88 HOH HOH A . E 4 HOH 88 290 89 HOH HOH A . E 4 HOH 89 291 90 HOH HOH A . E 4 HOH 90 292 91 HOH HOH A . E 4 HOH 91 293 92 HOH HOH A . E 4 HOH 92 294 93 HOH HOH A . E 4 HOH 93 295 94 HOH HOH A . E 4 HOH 94 296 95 HOH HOH A . E 4 HOH 95 297 96 HOH HOH A . E 4 HOH 96 298 97 HOH HOH A . E 4 HOH 97 299 98 HOH HOH A . E 4 HOH 98 300 99 HOH HOH A . E 4 HOH 99 301 100 HOH HOH A . E 4 HOH 100 302 101 HOH HOH A . E 4 HOH 101 303 102 HOH HOH A . E 4 HOH 102 304 103 HOH HOH A . E 4 HOH 103 305 104 HOH HOH A . E 4 HOH 104 306 105 HOH HOH A . E 4 HOH 105 307 106 HOH HOH A . E 4 HOH 106 308 107 HOH HOH A . E 4 HOH 107 309 108 HOH HOH A . E 4 HOH 108 310 109 HOH HOH A . E 4 HOH 109 311 110 HOH HOH A . E 4 HOH 110 312 111 HOH HOH A . E 4 HOH 111 313 112 HOH HOH A . E 4 HOH 112 314 113 HOH HOH A . E 4 HOH 113 315 114 HOH HOH A . E 4 HOH 114 316 115 HOH HOH A . E 4 HOH 115 317 116 HOH HOH A . E 4 HOH 116 318 117 HOH HOH A . E 4 HOH 117 319 118 HOH HOH A . E 4 HOH 118 320 119 HOH HOH A . E 4 HOH 119 321 120 HOH HOH A . E 4 HOH 120 322 121 HOH HOH A . E 4 HOH 121 323 122 HOH HOH A . E 4 HOH 122 324 123 HOH HOH A . E 4 HOH 123 325 124 HOH HOH A . E 4 HOH 124 326 125 HOH HOH A . E 4 HOH 125 327 126 HOH HOH A . E 4 HOH 126 328 127 HOH HOH A . E 4 HOH 127 329 128 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 57 A MSE 56 ? MET SELENOMETHIONINE 3 A MSE 160 A MSE 159 ? MET SELENOMETHIONINE 4 A MSE 182 A MSE 181 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 9 ? A CYS 8 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 11 ? A CYS 10 ? 1_555 122.1 ? 2 SG ? A CYS 9 ? A CYS 8 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 29 ? A CYS 28 ? 1_555 110.6 ? 3 SG ? A CYS 11 ? A CYS 10 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 29 ? A CYS 28 ? 1_555 98.1 ? 4 SG ? A CYS 9 ? A CYS 8 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 30 ? A CYS 29 ? 1_555 99.6 ? 5 SG ? A CYS 11 ? A CYS 10 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 30 ? A CYS 29 ? 1_555 107.3 ? 6 SG ? A CYS 29 ? A CYS 28 ? 1_555 ZN ? B ZN . ? A ZN 200 ? 1_555 SG ? A CYS 30 ? A CYS 29 ? 1_555 120.7 ? 7 SG ? A CYS 168 ? A CYS 167 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 170 ? A CYS 169 ? 1_555 111.8 ? 8 SG ? A CYS 168 ? A CYS 167 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 179 ? A CYS 178 ? 1_555 105.6 ? 9 SG ? A CYS 170 ? A CYS 169 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 179 ? A CYS 178 ? 1_555 104.6 ? 10 SG ? A CYS 168 ? A CYS 167 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 180 ? A CYS 179 ? 1_555 104.0 ? 11 SG ? A CYS 170 ? A CYS 169 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 180 ? A CYS 179 ? 1_555 109.8 ? 12 SG ? A CYS 179 ? A CYS 178 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 180 ? A CYS 179 ? 1_555 121.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' pdbx_struct_conn_angle 5 6 'Structure model' struct_conn 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.value' 10 6 'Structure model' '_struct_conn.pdbx_dist_value' 11 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 19 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 21 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 22 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 24 6 'Structure model' '_struct_ref_seq_dif.details' 25 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 11.8959 11.0248 22.1427 -0.0468 -0.0294 -0.0195 -0.0608 -0.0285 0.0255 0.7903 3.2400 3.0368 -0.3320 -0.2126 0.3876 0.1472 -0.0837 -0.0635 0.0039 -0.1117 -0.2089 0.1111 0.2460 -0.1805 'X-RAY DIFFRACTION' 2 ? refined 14.6595 23.6128 16.2532 -0.1175 -0.0676 -0.0286 -0.0064 -0.0072 0.0207 1.1208 2.2314 3.1129 -0.2910 0.5634 -0.3807 0.0897 -0.0886 -0.0012 0.0164 0.0223 -0.2232 -0.0065 -0.0951 0.0708 'X-RAY DIFFRACTION' 3 ? refined 11.5322 28.4246 17.2520 -0.1549 -0.0413 -0.0551 0.0155 0.0079 0.0135 2.3253 3.3019 13.6996 0.6989 4.4883 -0.2022 0.0529 0.0097 -0.0626 0.1600 -0.0098 -0.1044 0.0529 -0.3371 0.3062 'X-RAY DIFFRACTION' 4 ? refined 10.5745 35.1568 3.5860 0.0722 -0.0821 -0.0789 0.0175 -0.0015 0.0152 1.5283 1.6295 4.8341 -0.3660 -0.0553 -1.6871 -0.0293 -0.0305 0.0598 0.0605 0.0431 -0.0006 -0.0723 -0.6592 0.0035 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 2 A 40 ALL A 1 A 39 'X-RAY DIFFRACTION' ? 2 2 A 47 A 124 ALL A 46 A 123 'X-RAY DIFFRACTION' ? 3 3 A 128 A 144 ALL A 127 A 143 'X-RAY DIFFRACTION' ? 4 4 A 146 A 184 ALL A 145 A 183 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 SHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 112 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 112 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 112 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.08 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.78 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 28 ? ? -130.85 -94.35 2 1 VAL A 66 ? ? 64.83 63.65 3 1 LYS A 67 ? ? -119.75 71.83 4 1 LEU A 76 ? ? -36.72 122.93 5 1 LYS A 143 ? ? -97.55 44.90 6 1 ALA A 144 ? ? -148.57 -31.22 7 1 CYS A 178 ? ? -141.43 -116.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 39 ? CD ? A GLN 40 CD 2 1 Y 1 A GLN 39 ? OE1 ? A GLN 40 OE1 3 1 Y 1 A GLN 39 ? NE2 ? A GLN 40 NE2 4 1 Y 1 A ARG 48 ? NE ? A ARG 49 NE 5 1 Y 1 A ARG 48 ? CZ ? A ARG 49 CZ 6 1 Y 1 A ARG 48 ? NH1 ? A ARG 49 NH1 7 1 Y 1 A ARG 48 ? NH2 ? A ARG 49 NH2 8 1 Y 1 A ASP 50 ? OD1 ? A ASP 51 OD1 9 1 Y 1 A ASP 50 ? OD2 ? A ASP 51 OD2 10 1 Y 1 A LYS 73 ? CE ? A LYS 74 CE 11 1 Y 1 A LYS 73 ? NZ ? A LYS 74 NZ 12 1 Y 1 A LYS 86 ? NZ ? A LYS 87 NZ 13 1 Y 1 A LYS 93 ? CE ? A LYS 94 CE 14 1 Y 1 A LYS 93 ? NZ ? A LYS 94 NZ 15 1 Y 1 A LYS 108 ? CE ? A LYS 109 CE 16 1 Y 1 A LYS 108 ? NZ ? A LYS 109 NZ 17 1 Y 1 A LYS 111 ? CD ? A LYS 112 CD 18 1 Y 1 A LYS 111 ? CE ? A LYS 112 CE 19 1 Y 1 A LYS 111 ? NZ ? A LYS 112 NZ 20 1 Y 1 A LYS 123 ? CD ? A LYS 124 CD 21 1 Y 1 A LYS 123 ? CE ? A LYS 124 CE 22 1 Y 1 A LYS 123 ? NZ ? A LYS 124 NZ 23 1 Y 1 A LYS 139 ? NZ ? A LYS 140 NZ 24 1 Y 1 A LYS 141 ? CD ? A LYS 142 CD 25 1 Y 1 A LYS 141 ? CE ? A LYS 142 CE 26 1 Y 1 A LYS 141 ? NZ ? A LYS 142 NZ 27 1 Y 1 A ASN 142 ? CG ? A ASN 143 CG 28 1 Y 1 A ASN 142 ? OD1 ? A ASN 143 OD1 29 1 Y 1 A ASN 142 ? ND2 ? A ASN 143 ND2 30 1 Y 1 A LYS 143 ? CG ? A LYS 144 CG 31 1 Y 1 A LYS 143 ? CD ? A LYS 144 CD 32 1 Y 1 A LYS 143 ? CE ? A LYS 144 CE 33 1 Y 1 A LYS 143 ? NZ ? A LYS 144 NZ 34 1 Y 1 A ASN 145 ? CG ? A ASN 146 CG 35 1 Y 1 A ASN 145 ? OD1 ? A ASN 146 OD1 36 1 Y 1 A ASN 145 ? ND2 ? A ASN 146 ND2 37 1 Y 1 A ASP 147 ? OD1 ? A ASP 148 OD1 38 1 Y 1 A ASP 147 ? OD2 ? A ASP 148 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLU 40 ? A GLU 41 3 1 Y 1 A VAL 41 ? A VAL 42 4 1 Y 1 A GLU 42 ? A GLU 43 5 1 Y 1 A ASP 43 ? A ASP 44 6 1 Y 1 A SER 44 ? A SER 45 7 1 Y 1 A ASP 45 ? A ASP 46 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #