HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-SEP-06 2IB0 TITLE CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN, RV2844, FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RV2844; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21/DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: CUSTOM KEYWDS 4-HELIX BUNDLE, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM, TBSGC, INTEGRATED KEYWDS 3 CENTER FOR STRUCTURE AND FUNCTION INNOVATION, ISFI, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.YU,E.H.BURSEY,T.RADHAKANNAN,C.Y.KIM,T.KAVIRATNE,T.WOODRUFF, AUTHOR 2 B.W.SEGELKE,T.LEKIN,D.TOPPANI,T.C.TERWILLIGER,L.W.HUNG,TB STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (TBSGC),INTEGRATED CENTER FOR STRUCTURE AND AUTHOR 4 FUNCTION INNOVATION (ISFI) REVDAT 5 21-FEB-24 2IB0 1 REMARK SEQADV REVDAT 4 18-OCT-17 2IB0 1 REMARK REVDAT 3 13-JUL-11 2IB0 1 VERSN REVDAT 2 24-FEB-09 2IB0 1 VERSN REVDAT 1 26-SEP-06 2IB0 0 JRNL AUTH M.YU,E.H.BURSEY,T.RADHAKANNAN,C.Y.KIM,T.KAVIRATNE, JRNL AUTH 2 T.WOODRUFF,B.W.SEGELKE,T.LEKIN,D.TOPPANI,T.C.TERWILLIGER, JRNL AUTH 3 L.W.HUNG JRNL TITL CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN, JRNL TITL 2 RV2844, FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.8 REMARK 3 NUMBER OF REFLECTIONS : 26469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1337 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 795 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 37.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2025 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 158 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 48.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.158 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.111 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.921 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2060 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2812 ; 1.575 ; 1.928 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 272 ;10.148 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;33.174 ;22.727 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 298 ;16.206 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.583 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.131 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1581 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 972 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1474 ; 0.291 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 107 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.329 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.170 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1401 ; 0.971 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2159 ; 1.584 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 757 ; 2.649 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 653 ; 4.051 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 158 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0520 15.6620 22.5380 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: -0.2225 REMARK 3 T33: 0.0737 T12: 0.0337 REMARK 3 T13: -0.1049 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 1.5566 L22: 0.6183 REMARK 3 L33: 5.7414 L12: 0.9224 REMARK 3 L13: 0.6415 L23: -0.0029 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: -0.0399 S13: 0.0003 REMARK 3 S21: 0.1993 S22: -0.1630 S23: -0.1417 REMARK 3 S31: 0.1371 S32: -0.0127 S33: 0.1606 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 17 B 148 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6930 41.1180 25.4200 REMARK 3 T TENSOR REMARK 3 T11: 0.0878 T22: -0.2558 REMARK 3 T33: -0.0002 T12: 0.0109 REMARK 3 T13: 0.0527 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.5179 L22: 4.5012 REMARK 3 L33: 4.3396 L12: 1.2995 REMARK 3 L13: -0.2915 L23: -2.3165 REMARK 3 S TENSOR REMARK 3 S11: 0.0432 S12: -0.1389 S13: -0.0283 REMARK 3 S21: -0.2245 S22: -0.1610 S23: 0.1424 REMARK 3 S31: 0.3529 S32: 0.0255 S33: 0.1178 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2IB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000039359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795,0.9800,0.96 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26492 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.8 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 38.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.34500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LISO4 0.2M CACODYLATE PH7 0.1M PEG400 REMARK 280 32%, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.66850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.01450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.01450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.83425 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.01450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.01450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 68.50275 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.01450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.01450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.83425 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.01450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.01450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 68.50275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 45.66850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -49.01450 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 49.01450 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -22.83425 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 49.01450 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -49.01450 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 22.83425 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 245 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 ALA A 7 REMARK 465 HIS A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 THR A 11 REMARK 465 PRO A 12 REMARK 465 LYS A 13 REMARK 465 ARG A 14 REMARK 465 SER A 15 REMARK 465 PRO A 16 REMARK 465 GLY A 159 REMARK 465 GLY A 160 REMARK 465 ASP A 161 REMARK 465 GLU A 162 REMARK 465 ARG A 163 REMARK 465 SER A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 HIS A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 PRO B 6 REMARK 465 ALA B 7 REMARK 465 HIS B 8 REMARK 465 GLY B 9 REMARK 465 ALA B 10 REMARK 465 THR B 11 REMARK 465 PRO B 12 REMARK 465 LYS B 13 REMARK 465 ARG B 14 REMARK 465 SER B 15 REMARK 465 PRO B 16 REMARK 465 GLY B 149 REMARK 465 ALA B 150 REMARK 465 TRP B 151 REMARK 465 PRO B 152 REMARK 465 ILE B 153 REMARK 465 THR B 154 REMARK 465 ALA B 155 REMARK 465 ALA B 156 REMARK 465 PHE B 157 REMARK 465 PRO B 158 REMARK 465 GLY B 159 REMARK 465 GLY B 160 REMARK 465 ASP B 161 REMARK 465 GLU B 162 REMARK 465 ARG B 163 REMARK 465 SER B 164 REMARK 465 HIS B 165 REMARK 465 HIS B 166 REMARK 465 HIS B 167 REMARK 465 HIS B 168 REMARK 465 HIS B 169 REMARK 465 HIS B 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 158 CG CD REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER B 17 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 17 N GLU B 18 1.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 17 CB SER B 17 OG 0.315 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 52 N - CA - CB ANGL. DEV. = 10.9 DEGREES REMARK 500 SER B 17 CA - CB - OG ANGL. DEV. = -32.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 47 158.25 -37.89 REMARK 500 PRO A 48 124.43 -37.59 REMARK 500 SER A 94 -2.46 -149.19 REMARK 500 SER B 94 11.58 -149.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 47 PRO A 48 131.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV2844 RELATED DB: TARGETDB DBREF 2IB0 A 1 162 UNP O05815 O05815_MYCTU 1 162 DBREF 2IB0 B 1 162 UNP O05815 O05815_MYCTU 1 162 SEQADV 2IB0 ARG A 163 UNP O05815 EXPRESSION TAG SEQADV 2IB0 SER A 164 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 165 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 166 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 167 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 168 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 169 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS A 170 UNP O05815 EXPRESSION TAG SEQADV 2IB0 ARG B 163 UNP O05815 EXPRESSION TAG SEQADV 2IB0 SER B 164 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 165 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 166 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 167 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 168 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 169 UNP O05815 EXPRESSION TAG SEQADV 2IB0 HIS B 170 UNP O05815 EXPRESSION TAG SEQRES 1 A 170 MET THR SER SER GLU PRO ALA HIS GLY ALA THR PRO LYS SEQRES 2 A 170 ARG SER PRO SER GLU GLY SER ALA ASP ASN ALA ALA LEU SEQRES 3 A 170 CYS ASP ALA LEU ALA VAL GLU HIS ALA THR ILE TYR GLY SEQRES 4 A 170 TYR GLY ILE VAL SER ALA LEU SER PRO PRO GLY VAL ASN SEQRES 5 A 170 PHE LEU VAL ALA ASP ALA LEU LYS GLN HIS ARG HIS ARG SEQRES 6 A 170 ARG ASP ASP VAL ILE VAL MET LEU SER ALA ARG GLY VAL SEQRES 7 A 170 THR ALA PRO ILE ALA ALA ALA GLY TYR GLN LEU PRO MET SEQRES 8 A 170 GLN VAL SER SER ALA ALA ASP ALA ALA ARG LEU ALA VAL SEQRES 9 A 170 ARG MET GLU ASN ASP GLY ALA THR ALA TRP ARG ALA VAL SEQRES 10 A 170 VAL GLU HIS ALA GLU THR ALA ASP ASP ARG VAL PHE ALA SEQRES 11 A 170 SER THR ALA LEU THR GLU SER ALA VAL MET ALA THR ARG SEQRES 12 A 170 TRP ASN ARG VAL LEU GLY ALA TRP PRO ILE THR ALA ALA SEQRES 13 A 170 PHE PRO GLY GLY ASP GLU ARG SER HIS HIS HIS HIS HIS SEQRES 14 A 170 HIS SEQRES 1 B 170 MET THR SER SER GLU PRO ALA HIS GLY ALA THR PRO LYS SEQRES 2 B 170 ARG SER PRO SER GLU GLY SER ALA ASP ASN ALA ALA LEU SEQRES 3 B 170 CYS ASP ALA LEU ALA VAL GLU HIS ALA THR ILE TYR GLY SEQRES 4 B 170 TYR GLY ILE VAL SER ALA LEU SER PRO PRO GLY VAL ASN SEQRES 5 B 170 PHE LEU VAL ALA ASP ALA LEU LYS GLN HIS ARG HIS ARG SEQRES 6 B 170 ARG ASP ASP VAL ILE VAL MET LEU SER ALA ARG GLY VAL SEQRES 7 B 170 THR ALA PRO ILE ALA ALA ALA GLY TYR GLN LEU PRO MET SEQRES 8 B 170 GLN VAL SER SER ALA ALA ASP ALA ALA ARG LEU ALA VAL SEQRES 9 B 170 ARG MET GLU ASN ASP GLY ALA THR ALA TRP ARG ALA VAL SEQRES 10 B 170 VAL GLU HIS ALA GLU THR ALA ASP ASP ARG VAL PHE ALA SEQRES 11 B 170 SER THR ALA LEU THR GLU SER ALA VAL MET ALA THR ARG SEQRES 12 B 170 TRP ASN ARG VAL LEU GLY ALA TRP PRO ILE THR ALA ALA SEQRES 13 B 170 PHE PRO GLY GLY ASP GLU ARG SER HIS HIS HIS HIS HIS SEQRES 14 B 170 HIS FORMUL 3 HOH *158(H2 O) HELIX 1 1 SER A 17 SER A 47 1 31 HELIX 2 2 PRO A 48 GLY A 50 5 3 HELIX 3 3 VAL A 51 ARG A 76 1 26 HELIX 4 4 SER A 95 ALA A 121 1 27 HELIX 5 5 THR A 123 TRP A 151 1 29 HELIX 6 6 GLU B 18 SER B 47 1 30 HELIX 7 7 PRO B 48 GLY B 50 5 3 HELIX 8 8 VAL B 51 ARG B 76 1 26 HELIX 9 9 SER B 95 ALA B 121 1 27 HELIX 10 10 THR B 123 LEU B 148 1 26 CRYST1 98.029 98.029 91.337 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010201 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010948 0.00000