data_2IF0 # _entry.id 2IF0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2IF0 pdb_00002if0 10.2210/pdb2if0/pdb RCSB RCSB039501 ? ? WWPDB D_1000039501 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-01 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-04-11 5 'Structure model' 1 4 2023-10-25 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.value' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 18 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 5 'Structure model' '_struct_ref_seq_dif.details' 31 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2IF0 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2006-09-19 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2IEY . unspecified PDB 2IEZ . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chavas, L.M.G.' 1 'Torii, S.' 2 'Kamikubo, H.' 3 'Kawasaki, M.' 4 'Ihara, K.' 5 'Kato, R.' 6 'Kataoka, M.' 7 'Izumi, T.' 8 'Wakatsuki, S.' 9 # _citation.id primary _citation.title 'Structure of the small GTPase Rab27b shows an unexpected swapped dimer' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 63 _citation.page_first 769 _citation.page_last 779 _citation.year 2007 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17582168 _citation.pdbx_database_id_DOI 10.1107/S0907444907019725 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chavas, L.M.G.' 1 ? primary 'Torii, S.' 2 ? primary 'Kamikubo, H.' 3 ? primary 'Kawasaki, M.' 4 ? primary 'Ihara, K.' 5 ? primary 'Kato, R.' 6 ? primary 'Kataoka, M.' 7 ? primary 'Izumi, T.' 8 ? primary 'Wakatsuki, S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-27B' 22725.701 2 3.6.5.2 Q78L 'soluble domain' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 4 water nat water 18.015 14 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGL ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIP YFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGL ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIP YFETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 THR n 1 5 ASP n 1 6 GLY n 1 7 ASP n 1 8 TYR n 1 9 ASP n 1 10 TYR n 1 11 LEU n 1 12 ILE n 1 13 LYS n 1 14 LEU n 1 15 LEU n 1 16 ALA n 1 17 LEU n 1 18 GLY n 1 19 ASP n 1 20 SER n 1 21 GLY n 1 22 VAL n 1 23 GLY n 1 24 LYS n 1 25 THR n 1 26 THR n 1 27 PHE n 1 28 LEU n 1 29 TYR n 1 30 ARG n 1 31 TYR n 1 32 THR n 1 33 ASP n 1 34 ASN n 1 35 LYS n 1 36 PHE n 1 37 ASN n 1 38 PRO n 1 39 LYS n 1 40 PHE n 1 41 ILE n 1 42 THR n 1 43 THR n 1 44 VAL n 1 45 GLY n 1 46 ILE n 1 47 ASP n 1 48 PHE n 1 49 ARG n 1 50 GLU n 1 51 LYS n 1 52 ARG n 1 53 VAL n 1 54 VAL n 1 55 TYR n 1 56 ASP n 1 57 THR n 1 58 GLN n 1 59 GLY n 1 60 ALA n 1 61 ASP n 1 62 GLY n 1 63 ALA n 1 64 SER n 1 65 GLY n 1 66 LYS n 1 67 ALA n 1 68 PHE n 1 69 LYS n 1 70 VAL n 1 71 HIS n 1 72 LEU n 1 73 GLN n 1 74 LEU n 1 75 TRP n 1 76 ASP n 1 77 THR n 1 78 ALA n 1 79 GLY n 1 80 LEU n 1 81 GLU n 1 82 ARG n 1 83 PHE n 1 84 ARG n 1 85 SER n 1 86 LEU n 1 87 THR n 1 88 THR n 1 89 ALA n 1 90 PHE n 1 91 PHE n 1 92 ARG n 1 93 ASP n 1 94 ALA n 1 95 MET n 1 96 GLY n 1 97 PHE n 1 98 LEU n 1 99 LEU n 1 100 MET n 1 101 PHE n 1 102 ASP n 1 103 LEU n 1 104 THR n 1 105 SER n 1 106 GLN n 1 107 GLN n 1 108 SER n 1 109 PHE n 1 110 LEU n 1 111 ASN n 1 112 VAL n 1 113 ARG n 1 114 ASN n 1 115 TRP n 1 116 MET n 1 117 SER n 1 118 GLN n 1 119 LEU n 1 120 GLN n 1 121 ALA n 1 122 ASN n 1 123 ALA n 1 124 TYR n 1 125 CYS n 1 126 GLU n 1 127 ASN n 1 128 PRO n 1 129 ASP n 1 130 ILE n 1 131 VAL n 1 132 LEU n 1 133 ILE n 1 134 GLY n 1 135 ASN n 1 136 LYS n 1 137 ALA n 1 138 ASP n 1 139 LEU n 1 140 PRO n 1 141 ASP n 1 142 GLN n 1 143 ARG n 1 144 GLU n 1 145 VAL n 1 146 ASN n 1 147 GLU n 1 148 ARG n 1 149 GLN n 1 150 ALA n 1 151 ARG n 1 152 GLU n 1 153 LEU n 1 154 ALA n 1 155 GLU n 1 156 LYS n 1 157 TYR n 1 158 GLY n 1 159 ILE n 1 160 PRO n 1 161 TYR n 1 162 PHE n 1 163 GLU n 1 164 THR n 1 165 SER n 1 166 ALA n 1 167 ALA n 1 168 THR n 1 169 GLY n 1 170 GLN n 1 171 ASN n 1 172 VAL n 1 173 GLU n 1 174 LYS n 1 175 SER n 1 176 VAL n 1 177 GLU n 1 178 THR n 1 179 LEU n 1 180 LEU n 1 181 ASP n 1 182 LEU n 1 183 ILE n 1 184 MET n 1 185 LYS n 1 186 ARG n 1 187 MET n 1 188 GLU n 1 189 LYS n 1 190 CYS n 1 191 VAL n 1 192 GLU n 1 193 LYS n 1 194 THR n 1 195 GLN n 1 196 VAL n 1 197 PRO n 1 198 ASP n 1 199 THR n 1 200 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)LysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 THR 4 2 ? ? ? A . n A 1 5 ASP 5 3 ? ? ? A . n A 1 6 GLY 6 4 ? ? ? A . n A 1 7 ASP 7 5 ? ? ? A . n A 1 8 TYR 8 6 6 TYR TYR A . n A 1 9 ASP 9 7 7 ASP ASP A . n A 1 10 TYR 10 8 8 TYR TYR A . n A 1 11 LEU 11 9 9 LEU LEU A . n A 1 12 ILE 12 10 10 ILE ILE A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 ALA 16 14 14 ALA ALA A . n A 1 17 LEU 17 15 15 LEU LEU A . n A 1 18 GLY 18 16 16 GLY GLY A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 SER 20 18 18 SER SER A . n A 1 21 GLY 21 19 19 GLY GLY A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 GLY 23 21 21 GLY GLY A . n A 1 24 LYS 24 22 22 LYS LYS A . n A 1 25 THR 25 23 23 THR THR A . n A 1 26 THR 26 24 24 THR THR A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 TYR 29 27 27 TYR TYR A . n A 1 30 ARG 30 28 28 ARG ARG A . n A 1 31 TYR 31 29 29 TYR TYR A . n A 1 32 THR 32 30 30 THR THR A . n A 1 33 ASP 33 31 31 ASP ASP A . n A 1 34 ASN 34 32 32 ASN ASN A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 PHE 36 34 34 PHE PHE A . n A 1 37 ASN 37 35 35 ASN ASN A . n A 1 38 PRO 38 36 36 PRO PRO A . n A 1 39 LYS 39 37 37 LYS LYS A . n A 1 40 PHE 40 38 38 PHE PHE A . n A 1 41 ILE 41 39 39 ILE ILE A . n A 1 42 THR 42 40 40 THR THR A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 VAL 44 42 42 VAL VAL A . n A 1 45 GLY 45 43 43 GLY GLY A . n A 1 46 ILE 46 44 44 ILE ILE A . n A 1 47 ASP 47 45 45 ASP ASP A . n A 1 48 PHE 48 46 46 PHE PHE A . n A 1 49 ARG 49 47 47 ARG ARG A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 LYS 51 49 49 LYS LYS A . n A 1 52 ARG 52 50 50 ARG ARG A . n A 1 53 VAL 53 51 51 VAL VAL A . n A 1 54 VAL 54 52 52 VAL VAL A . n A 1 55 TYR 55 53 53 TYR TYR A . n A 1 56 ASP 56 54 54 ASP ASP A . n A 1 57 THR 57 55 ? ? ? A . n A 1 58 GLN 58 56 ? ? ? A . n A 1 59 GLY 59 57 ? ? ? A . n A 1 60 ALA 60 58 ? ? ? A . n A 1 61 ASP 61 59 ? ? ? A . n A 1 62 GLY 62 60 ? ? ? A . n A 1 63 ALA 63 61 ? ? ? A . n A 1 64 SER 64 62 ? ? ? A . n A 1 65 GLY 65 63 ? ? ? A . n A 1 66 LYS 66 64 ? ? ? A . n A 1 67 ALA 67 65 65 ALA ALA A . n A 1 68 PHE 68 66 66 PHE PHE A . n A 1 69 LYS 69 67 67 LYS LYS A . n A 1 70 VAL 70 68 68 VAL VAL A . n A 1 71 HIS 71 69 69 HIS HIS A . n A 1 72 LEU 72 70 70 LEU LEU A . n A 1 73 GLN 73 71 71 GLN GLN A . n A 1 74 LEU 74 72 72 LEU LEU A . n A 1 75 TRP 75 73 73 TRP TRP A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 THR 77 75 75 THR THR A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 GLY 79 77 77 GLY GLY A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 GLU 81 79 79 GLU GLU A . n A 1 82 ARG 82 80 80 ARG ARG A . n A 1 83 PHE 83 81 81 PHE PHE A . n A 1 84 ARG 84 82 82 ARG ARG A . n A 1 85 SER 85 83 83 SER SER A . n A 1 86 LEU 86 84 84 LEU LEU A . n A 1 87 THR 87 85 85 THR THR A . n A 1 88 THR 88 86 86 THR THR A . n A 1 89 ALA 89 87 87 ALA ALA A . n A 1 90 PHE 90 88 88 PHE PHE A . n A 1 91 PHE 91 89 89 PHE PHE A . n A 1 92 ARG 92 90 90 ARG ARG A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ALA 94 92 92 ALA ALA A . n A 1 95 MET 95 93 93 MET MET A . n A 1 96 GLY 96 94 94 GLY GLY A . n A 1 97 PHE 97 95 95 PHE PHE A . n A 1 98 LEU 98 96 96 LEU LEU A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 MET 100 98 98 MET MET A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 LEU 103 101 101 LEU LEU A . n A 1 104 THR 104 102 102 THR THR A . n A 1 105 SER 105 103 103 SER SER A . n A 1 106 GLN 106 104 104 GLN GLN A . n A 1 107 GLN 107 105 105 GLN GLN A . n A 1 108 SER 108 106 106 SER SER A . n A 1 109 PHE 109 107 107 PHE PHE A . n A 1 110 LEU 110 108 108 LEU LEU A . n A 1 111 ASN 111 109 109 ASN ASN A . n A 1 112 VAL 112 110 110 VAL VAL A . n A 1 113 ARG 113 111 111 ARG ARG A . n A 1 114 ASN 114 112 112 ASN ASN A . n A 1 115 TRP 115 113 113 TRP TRP A . n A 1 116 MET 116 114 114 MET MET A . n A 1 117 SER 117 115 115 SER SER A . n A 1 118 GLN 118 116 116 GLN GLN A . n A 1 119 LEU 119 117 117 LEU LEU A . n A 1 120 GLN 120 118 118 GLN GLN A . n A 1 121 ALA 121 119 119 ALA ALA A . n A 1 122 ASN 122 120 120 ASN ASN A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 TYR 124 122 122 TYR TYR A . n A 1 125 CYS 125 123 123 CYS CYS A . n A 1 126 GLU 126 124 124 GLU GLU A . n A 1 127 ASN 127 125 125 ASN ASN A . n A 1 128 PRO 128 126 126 PRO PRO A . n A 1 129 ASP 129 127 127 ASP ASP A . n A 1 130 ILE 130 128 128 ILE ILE A . n A 1 131 VAL 131 129 129 VAL VAL A . n A 1 132 LEU 132 130 130 LEU LEU A . n A 1 133 ILE 133 131 131 ILE ILE A . n A 1 134 GLY 134 132 132 GLY GLY A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 LYS 136 134 134 LYS LYS A . n A 1 137 ALA 137 135 135 ALA ALA A . n A 1 138 ASP 138 136 136 ASP ASP A . n A 1 139 LEU 139 137 137 LEU LEU A . n A 1 140 PRO 140 138 138 PRO PRO A . n A 1 141 ASP 141 139 139 ASP ASP A . n A 1 142 GLN 142 140 140 GLN GLN A . n A 1 143 ARG 143 141 141 ARG ARG A . n A 1 144 GLU 144 142 142 GLU GLU A . n A 1 145 VAL 145 143 143 VAL VAL A . n A 1 146 ASN 146 144 144 ASN ASN A . n A 1 147 GLU 147 145 145 GLU GLU A . n A 1 148 ARG 148 146 146 ARG ARG A . n A 1 149 GLN 149 147 147 GLN GLN A . n A 1 150 ALA 150 148 148 ALA ALA A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 GLU 152 150 150 GLU GLU A . n A 1 153 LEU 153 151 151 LEU LEU A . n A 1 154 ALA 154 152 152 ALA ALA A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 LYS 156 154 154 LYS LYS A . n A 1 157 TYR 157 155 155 TYR TYR A . n A 1 158 GLY 158 156 156 GLY GLY A . n A 1 159 ILE 159 157 157 ILE ILE A . n A 1 160 PRO 160 158 158 PRO PRO A . n A 1 161 TYR 161 159 159 TYR TYR A . n A 1 162 PHE 162 160 160 PHE PHE A . n A 1 163 GLU 163 161 161 GLU GLU A . n A 1 164 THR 164 162 162 THR THR A . n A 1 165 SER 165 163 163 SER SER A . n A 1 166 ALA 166 164 164 ALA ALA A . n A 1 167 ALA 167 165 165 ALA ALA A . n A 1 168 THR 168 166 166 THR THR A . n A 1 169 GLY 169 167 167 GLY GLY A . n A 1 170 GLN 170 168 168 GLN GLN A . n A 1 171 ASN 171 169 169 ASN ASN A . n A 1 172 VAL 172 170 170 VAL VAL A . n A 1 173 GLU 173 171 171 GLU GLU A . n A 1 174 LYS 174 172 172 LYS LYS A . n A 1 175 SER 175 173 173 SER SER A . n A 1 176 VAL 176 174 174 VAL VAL A . n A 1 177 GLU 177 175 175 GLU GLU A . n A 1 178 THR 178 176 176 THR THR A . n A 1 179 LEU 179 177 177 LEU LEU A . n A 1 180 LEU 180 178 178 LEU LEU A . n A 1 181 ASP 181 179 179 ASP ASP A . n A 1 182 LEU 182 180 180 LEU LEU A . n A 1 183 ILE 183 181 181 ILE ILE A . n A 1 184 MET 184 182 182 MET MET A . n A 1 185 LYS 185 183 183 LYS LYS A . n A 1 186 ARG 186 184 184 ARG ARG A . n A 1 187 MET 187 185 185 MET MET A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 LYS 189 187 187 LYS LYS A . n A 1 190 CYS 190 188 188 CYS CYS A . n A 1 191 VAL 191 189 189 VAL VAL A . n A 1 192 GLU 192 190 ? ? ? A . n A 1 193 LYS 193 191 ? ? ? A . n A 1 194 THR 194 192 ? ? ? A . n A 1 195 GLN 195 193 ? ? ? A . n A 1 196 VAL 196 194 ? ? ? A . n A 1 197 PRO 197 195 ? ? ? A . n A 1 198 ASP 198 196 ? ? ? A . n A 1 199 THR 199 197 ? ? ? A . n A 1 200 VAL 200 198 ? ? ? A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 SER 2 0 ? ? ? B . n B 1 3 MET 3 1 ? ? ? B . n B 1 4 THR 4 2 ? ? ? B . n B 1 5 ASP 5 3 ? ? ? B . n B 1 6 GLY 6 4 ? ? ? B . n B 1 7 ASP 7 5 ? ? ? B . n B 1 8 TYR 8 6 6 TYR TYR B . n B 1 9 ASP 9 7 7 ASP ASP B . n B 1 10 TYR 10 8 8 TYR TYR B . n B 1 11 LEU 11 9 9 LEU LEU B . n B 1 12 ILE 12 10 10 ILE ILE B . n B 1 13 LYS 13 11 11 LYS LYS B . n B 1 14 LEU 14 12 12 LEU LEU B . n B 1 15 LEU 15 13 13 LEU LEU B . n B 1 16 ALA 16 14 14 ALA ALA B . n B 1 17 LEU 17 15 15 LEU LEU B . n B 1 18 GLY 18 16 16 GLY GLY B . n B 1 19 ASP 19 17 17 ASP ASP B . n B 1 20 SER 20 18 18 SER SER B . n B 1 21 GLY 21 19 19 GLY GLY B . n B 1 22 VAL 22 20 20 VAL VAL B . n B 1 23 GLY 23 21 21 GLY GLY B . n B 1 24 LYS 24 22 22 LYS LYS B . n B 1 25 THR 25 23 23 THR THR B . n B 1 26 THR 26 24 24 THR THR B . n B 1 27 PHE 27 25 25 PHE PHE B . n B 1 28 LEU 28 26 26 LEU LEU B . n B 1 29 TYR 29 27 27 TYR TYR B . n B 1 30 ARG 30 28 28 ARG ARG B . n B 1 31 TYR 31 29 29 TYR TYR B . n B 1 32 THR 32 30 30 THR THR B . n B 1 33 ASP 33 31 31 ASP ASP B . n B 1 34 ASN 34 32 32 ASN ASN B . n B 1 35 LYS 35 33 33 LYS LYS B . n B 1 36 PHE 36 34 34 PHE PHE B . n B 1 37 ASN 37 35 35 ASN ASN B . n B 1 38 PRO 38 36 36 PRO PRO B . n B 1 39 LYS 39 37 37 LYS LYS B . n B 1 40 PHE 40 38 38 PHE PHE B . n B 1 41 ILE 41 39 39 ILE ILE B . n B 1 42 THR 42 40 40 THR THR B . n B 1 43 THR 43 41 41 THR THR B . n B 1 44 VAL 44 42 42 VAL VAL B . n B 1 45 GLY 45 43 43 GLY GLY B . n B 1 46 ILE 46 44 44 ILE ILE B . n B 1 47 ASP 47 45 45 ASP ASP B . n B 1 48 PHE 48 46 46 PHE PHE B . n B 1 49 ARG 49 47 47 ARG ARG B . n B 1 50 GLU 50 48 48 GLU GLU B . n B 1 51 LYS 51 49 49 LYS LYS B . n B 1 52 ARG 52 50 50 ARG ARG B . n B 1 53 VAL 53 51 51 VAL VAL B . n B 1 54 VAL 54 52 52 VAL VAL B . n B 1 55 TYR 55 53 53 TYR TYR B . n B 1 56 ASP 56 54 54 ASP ASP B . n B 1 57 THR 57 55 ? ? ? B . n B 1 58 GLN 58 56 ? ? ? B . n B 1 59 GLY 59 57 ? ? ? B . n B 1 60 ALA 60 58 ? ? ? B . n B 1 61 ASP 61 59 ? ? ? B . n B 1 62 GLY 62 60 ? ? ? B . n B 1 63 ALA 63 61 ? ? ? B . n B 1 64 SER 64 62 ? ? ? B . n B 1 65 GLY 65 63 ? ? ? B . n B 1 66 LYS 66 64 ? ? ? B . n B 1 67 ALA 67 65 65 ALA ALA B . n B 1 68 PHE 68 66 66 PHE PHE B . n B 1 69 LYS 69 67 67 LYS LYS B . n B 1 70 VAL 70 68 68 VAL VAL B . n B 1 71 HIS 71 69 69 HIS HIS B . n B 1 72 LEU 72 70 70 LEU LEU B . n B 1 73 GLN 73 71 71 GLN GLN B . n B 1 74 LEU 74 72 72 LEU LEU B . n B 1 75 TRP 75 73 73 TRP TRP B . n B 1 76 ASP 76 74 74 ASP ASP B . n B 1 77 THR 77 75 75 THR THR B . n B 1 78 ALA 78 76 76 ALA ALA B . n B 1 79 GLY 79 77 77 GLY GLY B . n B 1 80 LEU 80 78 78 LEU LEU B . n B 1 81 GLU 81 79 79 GLU GLU B . n B 1 82 ARG 82 80 80 ARG ARG B . n B 1 83 PHE 83 81 81 PHE PHE B . n B 1 84 ARG 84 82 82 ARG ARG B . n B 1 85 SER 85 83 83 SER SER B . n B 1 86 LEU 86 84 84 LEU LEU B . n B 1 87 THR 87 85 85 THR THR B . n B 1 88 THR 88 86 86 THR THR B . n B 1 89 ALA 89 87 87 ALA ALA B . n B 1 90 PHE 90 88 88 PHE PHE B . n B 1 91 PHE 91 89 89 PHE PHE B . n B 1 92 ARG 92 90 90 ARG ARG B . n B 1 93 ASP 93 91 91 ASP ASP B . n B 1 94 ALA 94 92 92 ALA ALA B . n B 1 95 MET 95 93 93 MET MET B . n B 1 96 GLY 96 94 94 GLY GLY B . n B 1 97 PHE 97 95 95 PHE PHE B . n B 1 98 LEU 98 96 96 LEU LEU B . n B 1 99 LEU 99 97 97 LEU LEU B . n B 1 100 MET 100 98 98 MET MET B . n B 1 101 PHE 101 99 99 PHE PHE B . n B 1 102 ASP 102 100 100 ASP ASP B . n B 1 103 LEU 103 101 101 LEU LEU B . n B 1 104 THR 104 102 102 THR THR B . n B 1 105 SER 105 103 103 SER SER B . n B 1 106 GLN 106 104 104 GLN GLN B . n B 1 107 GLN 107 105 105 GLN GLN B . n B 1 108 SER 108 106 106 SER SER B . n B 1 109 PHE 109 107 107 PHE PHE B . n B 1 110 LEU 110 108 108 LEU LEU B . n B 1 111 ASN 111 109 109 ASN ASN B . n B 1 112 VAL 112 110 110 VAL VAL B . n B 1 113 ARG 113 111 111 ARG ARG B . n B 1 114 ASN 114 112 112 ASN ASN B . n B 1 115 TRP 115 113 113 TRP TRP B . n B 1 116 MET 116 114 114 MET MET B . n B 1 117 SER 117 115 115 SER SER B . n B 1 118 GLN 118 116 116 GLN GLN B . n B 1 119 LEU 119 117 117 LEU LEU B . n B 1 120 GLN 120 118 118 GLN GLN B . n B 1 121 ALA 121 119 119 ALA ALA B . n B 1 122 ASN 122 120 120 ASN ASN B . n B 1 123 ALA 123 121 121 ALA ALA B . n B 1 124 TYR 124 122 122 TYR TYR B . n B 1 125 CYS 125 123 123 CYS CYS B . n B 1 126 GLU 126 124 124 GLU GLU B . n B 1 127 ASN 127 125 125 ASN ASN B . n B 1 128 PRO 128 126 126 PRO PRO B . n B 1 129 ASP 129 127 127 ASP ASP B . n B 1 130 ILE 130 128 128 ILE ILE B . n B 1 131 VAL 131 129 129 VAL VAL B . n B 1 132 LEU 132 130 130 LEU LEU B . n B 1 133 ILE 133 131 131 ILE ILE B . n B 1 134 GLY 134 132 132 GLY GLY B . n B 1 135 ASN 135 133 133 ASN ASN B . n B 1 136 LYS 136 134 134 LYS LYS B . n B 1 137 ALA 137 135 135 ALA ALA B . n B 1 138 ASP 138 136 136 ASP ASP B . n B 1 139 LEU 139 137 137 LEU LEU B . n B 1 140 PRO 140 138 138 PRO PRO B . n B 1 141 ASP 141 139 139 ASP ASP B . n B 1 142 GLN 142 140 140 GLN GLN B . n B 1 143 ARG 143 141 141 ARG ARG B . n B 1 144 GLU 144 142 142 GLU GLU B . n B 1 145 VAL 145 143 143 VAL VAL B . n B 1 146 ASN 146 144 144 ASN ASN B . n B 1 147 GLU 147 145 145 GLU GLU B . n B 1 148 ARG 148 146 146 ARG ARG B . n B 1 149 GLN 149 147 147 GLN GLN B . n B 1 150 ALA 150 148 148 ALA ALA B . n B 1 151 ARG 151 149 149 ARG ARG B . n B 1 152 GLU 152 150 150 GLU GLU B . n B 1 153 LEU 153 151 151 LEU LEU B . n B 1 154 ALA 154 152 152 ALA ALA B . n B 1 155 GLU 155 153 153 GLU GLU B . n B 1 156 LYS 156 154 154 LYS LYS B . n B 1 157 TYR 157 155 155 TYR TYR B . n B 1 158 GLY 158 156 156 GLY GLY B . n B 1 159 ILE 159 157 157 ILE ILE B . n B 1 160 PRO 160 158 158 PRO PRO B . n B 1 161 TYR 161 159 159 TYR TYR B . n B 1 162 PHE 162 160 160 PHE PHE B . n B 1 163 GLU 163 161 161 GLU GLU B . n B 1 164 THR 164 162 162 THR THR B . n B 1 165 SER 165 163 163 SER SER B . n B 1 166 ALA 166 164 164 ALA ALA B . n B 1 167 ALA 167 165 165 ALA ALA B . n B 1 168 THR 168 166 166 THR THR B . n B 1 169 GLY 169 167 167 GLY GLY B . n B 1 170 GLN 170 168 168 GLN GLN B . n B 1 171 ASN 171 169 169 ASN ASN B . n B 1 172 VAL 172 170 170 VAL VAL B . n B 1 173 GLU 173 171 171 GLU GLU B . n B 1 174 LYS 174 172 172 LYS LYS B . n B 1 175 SER 175 173 173 SER SER B . n B 1 176 VAL 176 174 174 VAL VAL B . n B 1 177 GLU 177 175 175 GLU GLU B . n B 1 178 THR 178 176 176 THR THR B . n B 1 179 LEU 179 177 177 LEU LEU B . n B 1 180 LEU 180 178 178 LEU LEU B . n B 1 181 ASP 181 179 179 ASP ASP B . n B 1 182 LEU 182 180 180 LEU LEU B . n B 1 183 ILE 183 181 181 ILE ILE B . n B 1 184 MET 184 182 182 MET MET B . n B 1 185 LYS 185 183 183 LYS LYS B . n B 1 186 ARG 186 184 184 ARG ARG B . n B 1 187 MET 187 185 185 MET MET B . n B 1 188 GLU 188 186 186 GLU GLU B . n B 1 189 LYS 189 187 187 LYS LYS B . n B 1 190 CYS 190 188 188 CYS CYS B . n B 1 191 VAL 191 189 189 VAL VAL B . n B 1 192 GLU 192 190 190 GLU GLU B . n B 1 193 LYS 193 191 ? ? ? B . n B 1 194 THR 194 192 ? ? ? B . n B 1 195 GLN 195 193 ? ? ? B . n B 1 196 VAL 196 194 ? ? ? B . n B 1 197 PRO 197 195 ? ? ? B . n B 1 198 ASP 198 196 ? ? ? B . n B 1 199 THR 199 197 ? ? ? B . n B 1 200 VAL 200 198 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 602 602 MG MG A . D 3 GDP 1 501 501 GDP GDP A . E 2 MG 1 502 502 MG MG B . F 3 GDP 1 1501 501 GDP GDP B . G 4 HOH 1 603 1 HOH HOH A . G 4 HOH 2 604 2 HOH HOH A . G 4 HOH 3 605 3 HOH HOH A . G 4 HOH 4 606 4 HOH HOH A . G 4 HOH 5 607 5 HOH HOH A . G 4 HOH 6 608 6 HOH HOH A . G 4 HOH 7 609 7 HOH HOH A . G 4 HOH 8 610 8 HOH HOH A . G 4 HOH 9 611 12 HOH HOH A . G 4 HOH 10 612 13 HOH HOH A . H 4 HOH 1 1502 9 HOH HOH B . H 4 HOH 2 1503 10 HOH HOH B . H 4 HOH 3 1504 11 HOH HOH B . H 4 HOH 4 1505 14 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 MOLREP . ? program 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 3 PDB_EXTRACT 1.700 'July 20, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 # _cell.length_a 54.960 _cell.length_b 64.755 _cell.length_c 153.327 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 2IF0 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.Int_Tables_number 19 _symmetry.entry_id 2IF0 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2IF0 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 63.4 _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details 'MPD, Cacodylate, pH 5.5, VAPOR DIFFUSION, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUAMTUM 4r' _diffrn_detector.pdbx_collection_date 2006-05-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A # _reflns.entry_id 2IF0 _reflns.d_resolution_low 76.69 _reflns.d_resolution_high 2.80 _reflns.number_obs 14358 _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.109 _reflns.pdbx_chi_squared 0.960 _reflns.pdbx_redundancy 6.500 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_low 2.90 _reflns_shell.d_res_high 2.80 _reflns_shell.number_measured_obs 1367 _reflns_shell.percent_possible_obs 97.400 _reflns_shell.Rmerge_I_obs 0.418 _reflns_shell.pdbx_chi_squared 1.022 _reflns_shell.pdbx_redundancy 5.200 _reflns_shell.number_unique_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.percent_possible_all 97.400 _reflns_shell.number_unique_all 1367 _reflns_shell.number_measured_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 2.800 _refine.ls_d_res_low 40.100 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.930 _refine.ls_number_reflns_obs 13384 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.263 _refine.ls_R_factor_R_work 0.25903 _refine.ls_R_factor_R_free 0.31492 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 704 _refine.B_iso_mean 41.486 _refine.aniso_B[1][1] -1.34 _refine.aniso_B[2][2] 4.24 _refine.aniso_B[3][3] -2.89 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.correlation_coeff_Fo_to_Fc 0.884 _refine.correlation_coeff_Fo_to_Fc_free 0.843 _refine.pdbx_overall_ESU_R 0.967 _refine.pdbx_overall_ESU_R_Free 0.419 _refine.overall_SU_ML 0.303 _refine.overall_SU_B 15.586 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.entry_id 2IF0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.26163 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 2IEZ' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2849 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 2921 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 40.100 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 2965 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.067 1.982 ? 4012 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.492 5.000 ? 345 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.242 23.960 ? 149 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.671 15.000 ? 522 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.035 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.070 0.200 ? 439 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 2218 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.195 0.200 ? 1239 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.305 0.200 ? 1984 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.153 0.200 ? 93 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.058 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.128 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.099 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.469 1.500 ? 1777 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.826 2.000 ? 2786 'X-RAY DIFFRACTION' ? r_scbond_it 0.897 3.000 ? 1370 'X-RAY DIFFRACTION' ? r_scangle_it 1.545 4.500 ? 1226 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.872 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.800 _refine_ls_shell.number_reflns_R_work 961 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.321 _refine_ls_shell.R_factor_R_free 0.415 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 57 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1018 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2IF0 _struct.title 'Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Rab27, GTPase, Rab, signaling protein, GDP, swapping' _struct_keywords.entry_id 2IF0 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RB27B_MOUSE _struct_ref.pdbx_db_accession Q99P58 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQER FRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYF ETSAATGQNVEKSVETLLDLIMKRMEKCVEKTQVPDTV ; _struct_ref.pdbx_align_begin 0 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2IF0 A 3 ? 200 ? Q99P58 0 ? 197 ? 1 198 2 1 2IF0 B 3 ? 200 ? Q99P58 0 ? 197 ? 1 198 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2IF0 GLY A 1 ? UNP Q99P58 ? ? 'expression tag' -1 1 1 2IF0 SER A 2 ? UNP Q99P58 ? ? 'expression tag' 0 2 1 2IF0 LEU A 80 ? UNP Q99P58 GLN 77 'engineered mutation' 78 3 2 2IF0 GLY B 1 ? UNP Q99P58 ? ? 'expression tag' -1 4 2 2IF0 SER B 2 ? UNP Q99P58 ? ? 'expression tag' 0 5 2 2IF0 LEU B 80 ? UNP Q99P58 GLN 77 'engineered mutation' 78 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA,PQS dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 7820 ? 3 MORE -69 ? 3 'SSA (A^2)' 19180 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H 3 1 A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details 1 'The biological unit is a monomer. There are 2 biological units in the asymmetric unit (chain A and chain B' 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 23 ? ASP A 33 ? GLY A 21 ASP A 31 1 ? 11 HELX_P HELX_P2 2 GLY A 79 ? ARG A 92 ? GLY A 77 ARG A 90 1 ? 14 HELX_P HELX_P3 3 SER A 105 ? SER A 117 ? SER A 103 SER A 115 1 ? 13 HELX_P HELX_P4 4 LEU A 139 ? ARG A 143 ? LEU A 137 ARG A 141 5 ? 5 HELX_P HELX_P5 5 ASN A 146 ? TYR A 157 ? ASN A 144 TYR A 155 1 ? 12 HELX_P HELX_P6 6 ASN A 171 ? VAL A 191 ? ASN A 169 VAL A 189 1 ? 21 HELX_P HELX_P7 7 GLY B 23 ? ASP B 33 ? GLY B 21 ASP B 31 1 ? 11 HELX_P HELX_P8 8 GLY B 79 ? ARG B 92 ? GLY B 77 ARG B 90 1 ? 14 HELX_P HELX_P9 9 SER B 105 ? GLN B 118 ? SER B 103 GLN B 116 1 ? 14 HELX_P HELX_P10 10 LEU B 139 ? ARG B 143 ? LEU B 137 ARG B 141 5 ? 5 HELX_P HELX_P11 11 ASN B 146 ? GLY B 158 ? ASN B 144 GLY B 156 1 ? 13 HELX_P HELX_P12 12 ASN B 171 ? GLU B 188 ? ASN B 169 GLU B 186 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 125 SG ? ? ? 1_555 A CYS 190 SG ? ? A CYS 123 A CYS 188 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? B CYS 125 SG ? ? ? 1_555 B CYS 190 SG ? ? B CYS 123 B CYS 188 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc1 metalc ? ? A THR 25 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 23 A MG 602 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc2 metalc ? ? D GDP . O1B ? ? ? 1_555 C MG . MG ? ? A GDP 501 A MG 602 1_555 ? ? ? ? ? ? ? 1.932 ? ? metalc3 metalc ? ? D GDP . O2B ? ? ? 1_555 C MG . MG ? ? A GDP 501 A MG 602 1_555 ? ? ? ? ? ? ? 2.985 ? ? metalc4 metalc ? ? B THR 25 OG1 ? ? ? 1_555 E MG . MG ? ? B THR 23 B MG 502 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 F GDP . O3B ? ? B MG 502 B GDP 1501 1_555 ? ? ? ? ? ? ? 2.277 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 25 ? A THR 23 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O1B ? D GDP . ? A GDP 501 ? 1_555 77.6 ? 2 OG1 ? A THR 25 ? A THR 23 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O2B ? D GDP . ? A GDP 501 ? 1_555 129.9 ? 3 O1B ? D GDP . ? A GDP 501 ? 1_555 MG ? C MG . ? A MG 602 ? 1_555 O2B ? D GDP . ? A GDP 501 ? 1_555 56.1 ? 4 OG1 ? B THR 25 ? B THR 23 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O3B ? F GDP . ? B GDP 1501 ? 1_555 76.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 125 ? CYS A 190 ? CYS A 123 ? 1_555 CYS A 188 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 125 ? CYS B 190 ? CYS B 123 ? 1_555 CYS B 188 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? parallel A 10 11 ? parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 161 ? GLU A 163 ? TYR A 159 GLU A 161 A 2 ASP A 129 ? ASN A 135 ? ASP A 127 ASN A 133 A 3 GLY A 96 ? ASP A 102 ? GLY A 94 ASP A 100 A 4 TYR A 10 ? LEU A 17 ? TYR A 8 LEU A 15 A 5 LYS B 69 ? ALA B 78 ? LYS B 67 ALA B 76 A 6 LYS B 39 ? VAL B 54 ? LYS B 37 VAL B 52 A 7 LYS A 39 ? TYR A 55 ? LYS A 37 TYR A 53 A 8 PHE A 68 ? ALA A 78 ? PHE A 66 ALA A 76 A 9 TYR B 10 ? GLY B 18 ? TYR B 8 GLY B 16 A 10 GLY B 96 ? ASP B 102 ? GLY B 94 ASP B 100 A 11 ASP B 129 ? ASN B 135 ? ASP B 127 ASN B 133 A 12 TYR B 161 ? GLU B 163 ? TYR B 159 GLU B 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 162 ? O PHE A 160 N GLY A 134 ? N GLY A 132 A 2 3 O ILE A 133 ? O ILE A 131 N LEU A 99 ? N LEU A 97 A 3 4 O LEU A 98 ? O LEU A 96 N LEU A 15 ? N LEU A 13 A 4 5 N TYR A 10 ? N TYR A 8 O HIS B 71 ? O HIS B 69 A 5 6 O LEU B 72 ? O LEU B 70 N LYS B 51 ? N LYS B 49 A 6 7 O PHE B 40 ? O PHE B 38 N ILE A 46 ? N ILE A 44 A 7 8 N TYR A 55 ? N TYR A 53 O PHE A 68 ? O PHE A 66 A 8 9 N GLN A 73 ? N GLN A 71 O LEU B 14 ? O LEU B 12 A 9 10 N LEU B 15 ? N LEU B 13 O LEU B 98 ? O LEU B 96 A 10 11 N PHE B 97 ? N PHE B 95 O ASP B 129 ? O ASP B 127 A 11 12 N GLY B 134 ? N GLY B 132 O PHE B 162 ? O PHE B 160 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 602 ? 2 'BINDING SITE FOR RESIDUE MG A 602' AC2 Software B MG 502 ? 2 'BINDING SITE FOR RESIDUE MG B 502' AC3 Software A GDP 501 ? 14 'BINDING SITE FOR RESIDUE GDP A 501' AC4 Software B GDP 1501 ? 18 'BINDING SITE FOR RESIDUE GDP B 1501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 THR A 25 ? THR A 23 . ? 1_555 ? 2 AC1 2 GDP D . ? GDP A 501 . ? 1_555 ? 3 AC2 2 THR B 25 ? THR B 23 . ? 1_555 ? 4 AC2 2 GDP F . ? GDP B 1501 . ? 1_555 ? 5 AC3 14 GLY A 21 ? GLY A 19 . ? 1_555 ? 6 AC3 14 VAL A 22 ? VAL A 20 . ? 1_555 ? 7 AC3 14 GLY A 23 ? GLY A 21 . ? 1_555 ? 8 AC3 14 LYS A 24 ? LYS A 22 . ? 1_555 ? 9 AC3 14 THR A 25 ? THR A 23 . ? 1_555 ? 10 AC3 14 THR A 26 ? THR A 24 . ? 1_555 ? 11 AC3 14 ASN A 135 ? ASN A 133 . ? 1_555 ? 12 AC3 14 LYS A 136 ? LYS A 134 . ? 1_555 ? 13 AC3 14 ASP A 138 ? ASP A 136 . ? 1_555 ? 14 AC3 14 LEU A 139 ? LEU A 137 . ? 1_555 ? 15 AC3 14 SER A 165 ? SER A 163 . ? 1_555 ? 16 AC3 14 ALA A 166 ? ALA A 164 . ? 1_555 ? 17 AC3 14 ALA A 167 ? ALA A 165 . ? 1_555 ? 18 AC3 14 MG C . ? MG A 602 . ? 1_555 ? 19 AC4 18 ASN A 37 ? ASN A 35 . ? 3_544 ? 20 AC4 18 PRO A 38 ? PRO A 36 . ? 3_544 ? 21 AC4 18 LYS A 39 ? LYS A 37 . ? 3_544 ? 22 AC4 18 ASP B 19 ? ASP B 17 . ? 1_555 ? 23 AC4 18 GLY B 21 ? GLY B 19 . ? 1_555 ? 24 AC4 18 VAL B 22 ? VAL B 20 . ? 1_555 ? 25 AC4 18 GLY B 23 ? GLY B 21 . ? 1_555 ? 26 AC4 18 LYS B 24 ? LYS B 22 . ? 1_555 ? 27 AC4 18 THR B 25 ? THR B 23 . ? 1_555 ? 28 AC4 18 THR B 26 ? THR B 24 . ? 1_555 ? 29 AC4 18 ASN B 135 ? ASN B 133 . ? 1_555 ? 30 AC4 18 LYS B 136 ? LYS B 134 . ? 1_555 ? 31 AC4 18 ASP B 138 ? ASP B 136 . ? 1_555 ? 32 AC4 18 LEU B 139 ? LEU B 137 . ? 1_555 ? 33 AC4 18 SER B 165 ? SER B 163 . ? 1_555 ? 34 AC4 18 ALA B 166 ? ALA B 164 . ? 1_555 ? 35 AC4 18 ALA B 167 ? ALA B 165 . ? 1_555 ? 36 AC4 18 MG E . ? MG B 502 . ? 1_555 ? # _pdbx_entry_details.entry_id 2IF0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 115 ? ? -59.77 -4.15 2 1 ASN A 169 ? ? 58.08 8.82 3 1 THR B 30 ? ? -109.67 -61.49 4 1 ASP B 31 ? ? 53.97 77.99 5 1 PHE B 66 ? ? -162.94 -56.90 6 1 TYR B 122 ? ? -35.78 -33.96 7 1 LYS B 134 ? ? 71.27 36.68 8 1 LEU B 137 ? ? -113.96 77.97 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 20.2570 30.2269 -20.0007 -0.2635 -0.0389 -0.1318 0.0226 -0.0486 0.0379 0.2309 3.4988 2.6802 -0.8603 -0.5832 1.5769 0.0708 0.0240 0.1243 0.1867 -0.0231 -0.3382 -0.1238 0.1788 -0.0476 'X-RAY DIFFRACTION' 2 ? refined -4.3665 -3.3262 -18.0739 -0.0814 -0.2700 -0.1270 0.0587 -0.0018 0.0338 2.3995 0.9189 4.2076 0.9875 1.4942 1.9109 -0.1135 0.2138 0.0329 0.4421 0.1643 -0.1320 0.2316 0.5110 -0.0508 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 11 A 13 A 30 A 32 ? 'X-RAY DIFFRACTION' ? 2 1 A 94 A 96 A 185 A 187 ? 'X-RAY DIFFRACTION' ? 3 2 B 11 B 13 B 30 B 32 ? 'X-RAY DIFFRACTION' ? 4 2 B 94 B 96 B 185 B 187 ? 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 2IF0 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.000 _pdbx_phasing_MR.d_res_low_rotation 40.120 _pdbx_phasing_MR.d_res_high_translation 4.000 _pdbx_phasing_MR.d_res_low_translation 40.120 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A THR 2 ? A THR 4 5 1 Y 1 A ASP 3 ? A ASP 5 6 1 Y 1 A GLY 4 ? A GLY 6 7 1 Y 1 A ASP 5 ? A ASP 7 8 1 Y 1 A THR 55 ? A THR 57 9 1 Y 1 A GLN 56 ? A GLN 58 10 1 Y 1 A GLY 57 ? A GLY 59 11 1 Y 1 A ALA 58 ? A ALA 60 12 1 Y 1 A ASP 59 ? A ASP 61 13 1 Y 1 A GLY 60 ? A GLY 62 14 1 Y 1 A ALA 61 ? A ALA 63 15 1 Y 1 A SER 62 ? A SER 64 16 1 Y 1 A GLY 63 ? A GLY 65 17 1 Y 1 A LYS 64 ? A LYS 66 18 1 Y 1 A GLU 190 ? A GLU 192 19 1 Y 1 A LYS 191 ? A LYS 193 20 1 Y 1 A THR 192 ? A THR 194 21 1 Y 1 A GLN 193 ? A GLN 195 22 1 Y 1 A VAL 194 ? A VAL 196 23 1 Y 1 A PRO 195 ? A PRO 197 24 1 Y 1 A ASP 196 ? A ASP 198 25 1 Y 1 A THR 197 ? A THR 199 26 1 Y 1 A VAL 198 ? A VAL 200 27 1 Y 1 B GLY -1 ? B GLY 1 28 1 Y 1 B SER 0 ? B SER 2 29 1 Y 1 B MET 1 ? B MET 3 30 1 Y 1 B THR 2 ? B THR 4 31 1 Y 1 B ASP 3 ? B ASP 5 32 1 Y 1 B GLY 4 ? B GLY 6 33 1 Y 1 B ASP 5 ? B ASP 7 34 1 Y 1 B THR 55 ? B THR 57 35 1 Y 1 B GLN 56 ? B GLN 58 36 1 Y 1 B GLY 57 ? B GLY 59 37 1 Y 1 B ALA 58 ? B ALA 60 38 1 Y 1 B ASP 59 ? B ASP 61 39 1 Y 1 B GLY 60 ? B GLY 62 40 1 Y 1 B ALA 61 ? B ALA 63 41 1 Y 1 B SER 62 ? B SER 64 42 1 Y 1 B GLY 63 ? B GLY 65 43 1 Y 1 B LYS 64 ? B LYS 66 44 1 Y 1 B LYS 191 ? B LYS 193 45 1 Y 1 B THR 192 ? B THR 194 46 1 Y 1 B GLN 193 ? B GLN 195 47 1 Y 1 B VAL 194 ? B VAL 196 48 1 Y 1 B PRO 195 ? B PRO 197 49 1 Y 1 B ASP 196 ? B ASP 198 50 1 Y 1 B THR 197 ? B THR 199 51 1 Y 1 B VAL 198 ? B VAL 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2IEZ _pdbx_initial_refinement_model.details 'PDB ENTRY 2IEZ' # _atom_sites.entry_id 2IF0 _atom_sites.fract_transf_matrix[1][1] 0.018195 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015443 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006522 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_