HEADER SIGNALING PROTEIN 27-SEP-06 2II9 TITLE ANABAENA SENSORY RHODOPSIN TRANSDUCER COMPND MOL_ID: 1; COMPND 2 MOLECULE: SENSORY RHODOPSIN TRANSDUCER PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANABAENA SP.; SOURCE 3 ORGANISM_TAXID: 1167; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PKJ KEYWDS RHODOPSIN, TRANSDUCER, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.VOGELEY REVDAT 4 21-FEB-24 2II9 1 SEQADV REVDAT 3 18-OCT-17 2II9 1 REMARK REVDAT 2 24-FEB-09 2II9 1 VERSN REVDAT 1 20-MAR-07 2II9 0 JRNL AUTH L.VOGELEY,V.D.TRIVEDI,O.A.SINESHCHEKOV,E.N.SPUDICH, JRNL AUTH 2 J.L.SPUDICH,H.LUECKE JRNL TITL CRYSTAL STRUCTURE OF THE ANABAENA SENSORY RHODOPSIN JRNL TITL 2 TRANSDUCER. JRNL REF J.MOL.BIOL. V. 367 741 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17289074 JRNL DOI 10.1016/J.JMB.2006.11.074 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 27875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2774 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1564 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 173 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2908 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 201 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.221 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.683 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2990 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4105 ; 1.932 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 6.363 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;34.286 ;23.768 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 434 ;14.542 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.320 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 470 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2336 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1155 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1969 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 199 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 81 ; 0.386 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.357 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1931 ; 1.436 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3081 ; 2.286 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1216 ; 3.073 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1024 ; 5.090 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 17 1 REMARK 3 1 B 2 B 17 1 REMARK 3 1 C 2 C 17 1 REMARK 3 1 D 2 D 17 1 REMARK 3 2 A 33 A 101 1 REMARK 3 2 B 33 B 101 1 REMARK 3 2 C 33 C 101 1 REMARK 3 2 D 33 D 101 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 665 ; 0.080 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 B (A): 665 ; 0.090 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 C (A): 665 ; 0.090 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 D (A): 665 ; 0.110 ; 0.050 REMARK 3 TIGHT THERMAL 1 A (A**2): 665 ; 0.270 ; 0.500 REMARK 3 TIGHT THERMAL 1 B (A**2): 665 ; 0.290 ; 0.500 REMARK 3 TIGHT THERMAL 1 C (A**2): 665 ; 0.280 ; 0.500 REMARK 3 TIGHT THERMAL 1 D (A**2): 665 ; 0.290 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2II9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000039603. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29903 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.35700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA2HPO4, 100 MM CITRIC ACID, REMARK 280 35% (V/V) 2-PROPANOL, PH 4.2, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.57600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.42100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.57600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.42100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 TYR A 19 REMARK 465 GLY A 20 REMARK 465 ASN A 21 REMARK 465 GLY A 22 REMARK 465 PRO A 23 REMARK 465 GLU A 24 REMARK 465 PRO A 25 REMARK 465 GLN A 26 REMARK 465 PHE A 27 REMARK 465 ILE A 28 REMARK 465 SER A 29 REMARK 465 HIS A 30 REMARK 465 ARG A 105 REMARK 465 LEU A 106 REMARK 465 ASP A 107 REMARK 465 SER A 108 REMARK 465 ARG A 109 REMARK 465 GLN A 110 REMARK 465 ALA A 111 REMARK 465 GLU A 112 REMARK 465 ASN A 113 REMARK 465 ALA A 114 REMARK 465 LEU A 115 REMARK 465 LEU A 116 REMARK 465 SER A 117 REMARK 465 THR A 118 REMARK 465 ILE A 119 REMARK 465 ALA A 120 REMARK 465 TYR A 121 REMARK 465 ALA A 122 REMARK 465 ASN A 123 REMARK 465 THR A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 465 MET B 0 REMARK 465 TYR B 19 REMARK 465 GLY B 20 REMARK 465 ASN B 21 REMARK 465 GLY B 22 REMARK 465 PRO B 23 REMARK 465 GLU B 24 REMARK 465 PRO B 25 REMARK 465 GLN B 26 REMARK 465 PHE B 27 REMARK 465 ILE B 28 REMARK 465 SER B 29 REMARK 465 HIS B 30 REMARK 465 ARG B 105 REMARK 465 LEU B 106 REMARK 465 ASP B 107 REMARK 465 SER B 108 REMARK 465 ARG B 109 REMARK 465 GLN B 110 REMARK 465 ALA B 111 REMARK 465 GLU B 112 REMARK 465 ASN B 113 REMARK 465 ALA B 114 REMARK 465 LEU B 115 REMARK 465 LEU B 116 REMARK 465 SER B 117 REMARK 465 THR B 118 REMARK 465 ILE B 119 REMARK 465 ALA B 120 REMARK 465 TYR B 121 REMARK 465 ALA B 122 REMARK 465 ASN B 123 REMARK 465 THR B 124 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 MET C 0 REMARK 465 GLY C 20 REMARK 465 ASN C 21 REMARK 465 GLY C 22 REMARK 465 PRO C 23 REMARK 465 GLU C 24 REMARK 465 PRO C 25 REMARK 465 GLN C 26 REMARK 465 PHE C 27 REMARK 465 ILE C 28 REMARK 465 SER C 29 REMARK 465 HIS C 30 REMARK 465 ARG C 105 REMARK 465 LEU C 106 REMARK 465 ASP C 107 REMARK 465 SER C 108 REMARK 465 ARG C 109 REMARK 465 GLN C 110 REMARK 465 ALA C 111 REMARK 465 GLU C 112 REMARK 465 ASN C 113 REMARK 465 ALA C 114 REMARK 465 LEU C 115 REMARK 465 LEU C 116 REMARK 465 SER C 117 REMARK 465 THR C 118 REMARK 465 ILE C 119 REMARK 465 ALA C 120 REMARK 465 TYR C 121 REMARK 465 ALA C 122 REMARK 465 ASN C 123 REMARK 465 THR C 124 REMARK 465 HIS C 125 REMARK 465 HIS C 126 REMARK 465 HIS C 127 REMARK 465 HIS C 128 REMARK 465 HIS C 129 REMARK 465 HIS C 130 REMARK 465 MET D 0 REMARK 465 ASN D 21 REMARK 465 GLY D 22 REMARK 465 PRO D 23 REMARK 465 GLU D 24 REMARK 465 PRO D 25 REMARK 465 GLN D 26 REMARK 465 PHE D 27 REMARK 465 ILE D 28 REMARK 465 SER D 29 REMARK 465 HIS D 30 REMARK 465 ARG D 105 REMARK 465 LEU D 106 REMARK 465 ASP D 107 REMARK 465 SER D 108 REMARK 465 ARG D 109 REMARK 465 GLN D 110 REMARK 465 ALA D 111 REMARK 465 GLU D 112 REMARK 465 ASN D 113 REMARK 465 ALA D 114 REMARK 465 LEU D 115 REMARK 465 LEU D 116 REMARK 465 SER D 117 REMARK 465 THR D 118 REMARK 465 ILE D 119 REMARK 465 ALA D 120 REMARK 465 TYR D 121 REMARK 465 ALA D 122 REMARK 465 ASN D 123 REMARK 465 THR D 124 REMARK 465 HIS D 125 REMARK 465 HIS D 126 REMARK 465 HIS D 127 REMARK 465 HIS D 128 REMARK 465 HIS D 129 REMARK 465 HIS D 130 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 146 O HOH D 146 2655 1.38 REMARK 500 NE2 HIS D 85 O HOH D 157 2655 1.99 REMARK 500 CG ASN D 78 CE1 HIS D 85 2655 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 18 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 ARG A 73 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 PRO C 18 C - N - CA ANGL. DEV. = 28.6 DEGREES REMARK 500 PRO C 18 C - N - CD ANGL. DEV. = -23.1 DEGREES REMARK 500 ARG C 73 NE - CZ - NH1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG C 73 NE - CZ - NH2 ANGL. DEV. = 6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 10.24 -143.18 REMARK 500 ASP B 53 16.49 -145.15 REMARK 500 ASN B 78 11.87 -145.43 REMARK 500 PRO C 18 -23.52 -19.21 REMARK 500 ASP C 53 19.83 -140.28 REMARK 500 ASN C 78 10.40 -143.45 REMARK 500 ASN D 78 6.71 -152.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2II7 RELATED DB: PDB REMARK 900 RELATED ID: 2II8 RELATED DB: PDB REMARK 900 RELATED ID: 2IIA RELATED DB: PDB DBREF 2II9 A 0 124 UNP Q8YSC3 Q8YSC3_ANASP 1 125 DBREF 2II9 B 0 124 UNP Q8YSC3 Q8YSC3_ANASP 1 125 DBREF 2II9 C 0 124 UNP Q8YSC3 Q8YSC3_ANASP 1 125 DBREF 2II9 D 0 124 UNP Q8YSC3 Q8YSC3_ANASP 1 125 SEQADV 2II9 HIS A 125 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS A 126 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS A 127 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS A 128 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS A 129 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS A 130 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 125 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 126 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 127 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 128 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 129 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS B 130 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 125 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 126 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 127 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 128 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 129 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS C 130 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 125 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 126 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 127 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 128 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 129 UNP Q8YSC3 EXPRESSION TAG SEQADV 2II9 HIS D 130 UNP Q8YSC3 EXPRESSION TAG SEQRES 1 A 131 MET SER LEU SER ILE GLY ARG THR CYS TRP ALA ILE ALA SEQRES 2 A 131 GLU GLY TYR ILE PRO PRO TYR GLY ASN GLY PRO GLU PRO SEQRES 3 A 131 GLN PHE ILE SER HIS GLU THR VAL CYS ILE LEU ASN ALA SEQRES 4 A 131 GLY ASP GLU ASP ALA HIS VAL GLU ILE THR ILE TYR TYR SEQRES 5 A 131 SER ASP LYS GLU PRO VAL GLY PRO TYR ARG LEU THR VAL SEQRES 6 A 131 PRO ALA ARG ARG THR LYS HIS VAL ARG PHE ASN ASP LEU SEQRES 7 A 131 ASN ASP PRO ALA PRO ILE PRO HIS ASP THR ASP PHE ALA SEQRES 8 A 131 SER VAL ILE GLN SER ASN VAL PRO ILE VAL VAL GLN HIS SEQRES 9 A 131 THR ARG LEU ASP SER ARG GLN ALA GLU ASN ALA LEU LEU SEQRES 10 A 131 SER THR ILE ALA TYR ALA ASN THR HIS HIS HIS HIS HIS SEQRES 11 A 131 HIS SEQRES 1 B 131 MET SER LEU SER ILE GLY ARG THR CYS TRP ALA ILE ALA SEQRES 2 B 131 GLU GLY TYR ILE PRO PRO TYR GLY ASN GLY PRO GLU PRO SEQRES 3 B 131 GLN PHE ILE SER HIS GLU THR VAL CYS ILE LEU ASN ALA SEQRES 4 B 131 GLY ASP GLU ASP ALA HIS VAL GLU ILE THR ILE TYR TYR SEQRES 5 B 131 SER ASP LYS GLU PRO VAL GLY PRO TYR ARG LEU THR VAL SEQRES 6 B 131 PRO ALA ARG ARG THR LYS HIS VAL ARG PHE ASN ASP LEU SEQRES 7 B 131 ASN ASP PRO ALA PRO ILE PRO HIS ASP THR ASP PHE ALA SEQRES 8 B 131 SER VAL ILE GLN SER ASN VAL PRO ILE VAL VAL GLN HIS SEQRES 9 B 131 THR ARG LEU ASP SER ARG GLN ALA GLU ASN ALA LEU LEU SEQRES 10 B 131 SER THR ILE ALA TYR ALA ASN THR HIS HIS HIS HIS HIS SEQRES 11 B 131 HIS SEQRES 1 C 131 MET SER LEU SER ILE GLY ARG THR CYS TRP ALA ILE ALA SEQRES 2 C 131 GLU GLY TYR ILE PRO PRO TYR GLY ASN GLY PRO GLU PRO SEQRES 3 C 131 GLN PHE ILE SER HIS GLU THR VAL CYS ILE LEU ASN ALA SEQRES 4 C 131 GLY ASP GLU ASP ALA HIS VAL GLU ILE THR ILE TYR TYR SEQRES 5 C 131 SER ASP LYS GLU PRO VAL GLY PRO TYR ARG LEU THR VAL SEQRES 6 C 131 PRO ALA ARG ARG THR LYS HIS VAL ARG PHE ASN ASP LEU SEQRES 7 C 131 ASN ASP PRO ALA PRO ILE PRO HIS ASP THR ASP PHE ALA SEQRES 8 C 131 SER VAL ILE GLN SER ASN VAL PRO ILE VAL VAL GLN HIS SEQRES 9 C 131 THR ARG LEU ASP SER ARG GLN ALA GLU ASN ALA LEU LEU SEQRES 10 C 131 SER THR ILE ALA TYR ALA ASN THR HIS HIS HIS HIS HIS SEQRES 11 C 131 HIS SEQRES 1 D 131 MET SER LEU SER ILE GLY ARG THR CYS TRP ALA ILE ALA SEQRES 2 D 131 GLU GLY TYR ILE PRO PRO TYR GLY ASN GLY PRO GLU PRO SEQRES 3 D 131 GLN PHE ILE SER HIS GLU THR VAL CYS ILE LEU ASN ALA SEQRES 4 D 131 GLY ASP GLU ASP ALA HIS VAL GLU ILE THR ILE TYR TYR SEQRES 5 D 131 SER ASP LYS GLU PRO VAL GLY PRO TYR ARG LEU THR VAL SEQRES 6 D 131 PRO ALA ARG ARG THR LYS HIS VAL ARG PHE ASN ASP LEU SEQRES 7 D 131 ASN ASP PRO ALA PRO ILE PRO HIS ASP THR ASP PHE ALA SEQRES 8 D 131 SER VAL ILE GLN SER ASN VAL PRO ILE VAL VAL GLN HIS SEQRES 9 D 131 THR ARG LEU ASP SER ARG GLN ALA GLU ASN ALA LEU LEU SEQRES 10 D 131 SER THR ILE ALA TYR ALA ASN THR HIS HIS HIS HIS HIS SEQRES 11 D 131 HIS FORMUL 5 HOH *201(H2 O) HELIX 1 1 ASN A 75 LEU A 77 5 3 HELIX 2 2 ASN B 75 LEU B 77 5 3 HELIX 3 3 ASN C 75 LEU C 77 5 3 HELIX 4 4 ASN D 75 LEU D 77 5 3 SHEET 1 A 4 ARG A 6 ILE A 11 0 SHEET 2 A 4 PHE A 89 THR A 104 -1 O SER A 91 N ILE A 11 SHEET 3 A 4 ALA A 43 TYR A 51 -1 N TYR A 50 O ALA A 90 SHEET 4 A 4 VAL A 57 VAL A 64 -1 O VAL A 57 N ILE A 49 SHEET 1 B 4 ARG A 6 ILE A 11 0 SHEET 2 B 4 PHE A 89 THR A 104 -1 O SER A 91 N ILE A 11 SHEET 3 B 4 THR A 32 ASN A 37 -1 N LEU A 36 O VAL A 100 SHEET 4 B 4 ARG A 68 ARG A 73 -1 O VAL A 72 N VAL A 33 SHEET 1 C 4 ARG B 6 ILE B 11 0 SHEET 2 C 4 PHE B 89 HIS B 103 -1 O ILE B 93 N TRP B 9 SHEET 3 C 4 ALA B 43 TYR B 51 -1 N GLU B 46 O GLN B 94 SHEET 4 C 4 VAL B 57 VAL B 64 -1 O LEU B 62 N VAL B 45 SHEET 1 D 4 ARG B 6 ILE B 11 0 SHEET 2 D 4 PHE B 89 HIS B 103 -1 O ILE B 93 N TRP B 9 SHEET 3 D 4 THR B 32 ASN B 37 -1 N CYS B 34 O GLN B 102 SHEET 4 D 4 ARG B 68 ARG B 73 -1 O VAL B 72 N VAL B 33 SHEET 1 E 4 ARG C 6 ILE C 11 0 SHEET 2 E 4 PHE C 89 HIS C 103 -1 O ILE C 93 N TRP C 9 SHEET 3 E 4 ALA C 43 TYR C 51 -1 N GLU C 46 O GLN C 94 SHEET 4 E 4 VAL C 57 VAL C 64 -1 O VAL C 64 N ALA C 43 SHEET 1 F 4 ARG C 6 ILE C 11 0 SHEET 2 F 4 PHE C 89 HIS C 103 -1 O ILE C 93 N TRP C 9 SHEET 3 F 4 THR C 32 ASN C 37 -1 N CYS C 34 O GLN C 102 SHEET 4 F 4 ARG C 68 ARG C 73 -1 O VAL C 72 N VAL C 33 SHEET 1 G 4 ARG D 6 ILE D 11 0 SHEET 2 G 4 ALA D 90 GLN D 102 -1 O SER D 91 N ILE D 11 SHEET 3 G 4 ALA D 43 TYR D 50 -1 N TYR D 50 O ALA D 90 SHEET 4 G 4 VAL D 57 VAL D 64 -1 O LEU D 62 N VAL D 45 SHEET 1 H 4 ARG D 6 ILE D 11 0 SHEET 2 H 4 ALA D 90 GLN D 102 -1 O SER D 91 N ILE D 11 SHEET 3 H 4 THR D 32 ASN D 37 -1 N LEU D 36 O VAL D 100 SHEET 4 H 4 ARG D 68 ARG D 73 -1 O VAL D 72 N VAL D 33 CISPEP 1 GLY A 58 PRO A 59 0 3.55 CISPEP 2 ASP A 79 PRO A 80 0 9.32 CISPEP 3 GLY B 58 PRO B 59 0 0.90 CISPEP 4 ASP B 79 PRO B 80 0 8.44 CISPEP 5 GLY C 58 PRO C 59 0 1.44 CISPEP 6 ASP C 79 PRO C 80 0 9.82 CISPEP 7 GLY D 58 PRO D 59 0 3.65 CISPEP 8 ASP D 79 PRO D 80 0 8.47 CRYST1 85.152 78.842 70.582 90.00 106.81 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011744 0.000000 0.003548 0.00000 SCALE2 0.000000 0.012684 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014800 0.00000