HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-OCT-06 2IKB TITLE CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION NMB1012 FROM TITLE 2 NEISSERIA MENINGITIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN NMB1012; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 122586; SOURCE 4 STRAIN: MC58; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDM68 KEYWDS STRUCTURAL GENOMICS, NEISSERIA MENINGITIDIS, PSI-2, MCSG, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,H.LI,M.BARGASSA,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 13-JUL-11 2IKB 1 VERSN REVDAT 2 24-FEB-09 2IKB 1 VERSN REVDAT 1 21-NOV-06 2IKB 0 JRNL AUTH R.ZHANG,H.LI,M.BARGASSA,A.JOACHIMIAK JRNL TITL THE 1.7 A CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN JRNL TITL 2 NMB1012 FROM NEISSERIA MENINGITIDIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 64965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3482 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4553 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 251 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5067 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 557 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.11000 REMARK 3 B22 (A**2) : -1.89000 REMARK 3 B33 (A**2) : 0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.788 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5182 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3579 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6988 ; 1.410 ; 1.915 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8564 ; 0.973 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 635 ; 5.929 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 276 ;34.571 ;22.971 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 828 ;13.961 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;16.135 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 713 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5934 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1202 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1212 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3661 ; 0.203 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2552 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2649 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 399 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.244 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 97 ; 0.297 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 44 ; 0.157 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3882 ; 1.285 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1318 ; 0.266 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5010 ; 1.500 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2316 ; 2.467 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1978 ; 3.416 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 12 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 50 REMARK 3 RESIDUE RANGE : A 51 A 100 REMARK 3 RESIDUE RANGE : A 101 A 163 REMARK 3 RESIDUE RANGE : B 3 B 50 REMARK 3 RESIDUE RANGE : B 51 B 101 REMARK 3 RESIDUE RANGE : B 102 B 163 REMARK 3 RESIDUE RANGE : C 1 C 50 REMARK 3 RESIDUE RANGE : C 51 C 100 REMARK 3 RESIDUE RANGE : C 101 C 164 REMARK 3 RESIDUE RANGE : D 2 D 50 REMARK 3 RESIDUE RANGE : D 51 D 100 REMARK 3 RESIDUE RANGE : D 101 D 165 REMARK 3 ORIGIN FOR THE GROUP (A): 48.6520 5.2960 96.2920 REMARK 3 T TENSOR REMARK 3 T11: -0.0242 T22: -0.0203 REMARK 3 T33: 0.0085 T12: -0.0028 REMARK 3 T13: -0.0049 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.0017 L22: 0.3136 REMARK 3 L33: 0.3003 L12: -0.0136 REMARK 3 L13: -0.0188 L23: 0.0080 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: 0.0421 S13: -0.0193 REMARK 3 S21: 0.1003 S22: 0.0117 S23: -0.0360 REMARK 3 S31: -0.0084 S32: 0.0087 S33: 0.0074 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2IKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-06. REMARK 100 THE RCSB ID CODE IS RCSB039677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97980 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64965 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXE, SOLVE/RESOLVE, ARP/WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG MME2000, 0.1M TRIS-HCL, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.04350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: UNKNOWN, PROBABLY MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 164 REMARK 465 ASN A 165 REMARK 465 THR A 166 REMARK 465 ASP A 167 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 GLY B 141 REMARK 465 THR B 142 REMARK 465 PHE B 143 REMARK 465 THR B 144 REMARK 465 SER B 145 REMARK 465 PHE B 146 REMARK 465 GLY B 147 REMARK 465 ASP B 164 REMARK 465 ASN B 165 REMARK 465 THR B 166 REMARK 465 ASP B 167 REMARK 465 LYS C 24 REMARK 465 ASP C 25 REMARK 465 ASN C 165 REMARK 465 THR C 166 REMARK 465 ASP C 167 REMARK 465 MSE D 1 REMARK 465 LEU D 140 REMARK 465 THR D 166 REMARK 465 ASP D 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR D 44 O SER D 47 2.05 REMARK 500 O ALA A 163 O HOH A 344 2.06 REMARK 500 SE MSE C 48 O HOH C 298 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 21 111.90 -160.83 REMARK 500 ASN C 21 108.16 -168.51 REMARK 500 ASN C 42 34.27 -141.34 REMARK 500 PHE D 64 -65.25 -104.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR D 138 LYS D 139 55.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 207 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH B 218 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH B 238 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH B 249 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH B 271 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH B 285 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B 297 DISTANCE = 6.42 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC83859 RELATED DB: TARGETDB DBREF 2IKB A 1 167 UNP Q7DDI9 Q7DDI9_NEIMB 1 167 DBREF 2IKB B 1 167 UNP Q7DDI9 Q7DDI9_NEIMB 1 167 DBREF 2IKB C 1 167 UNP Q7DDI9 Q7DDI9_NEIMB 1 167 DBREF 2IKB D 1 167 UNP Q7DDI9 Q7DDI9_NEIMB 1 167 SEQADV 2IKB MSE A 1 UNP Q7DDI9 MET 1 MODIFIED RESIDUE SEQADV 2IKB MSE A 48 UNP Q7DDI9 MET 48 MODIFIED RESIDUE SEQADV 2IKB MSE A 51 UNP Q7DDI9 MET 51 MODIFIED RESIDUE SEQADV 2IKB MSE A 73 UNP Q7DDI9 MET 73 MODIFIED RESIDUE SEQADV 2IKB MSE A 96 UNP Q7DDI9 MET 96 MODIFIED RESIDUE SEQADV 2IKB MSE B 1 UNP Q7DDI9 MET 1 MODIFIED RESIDUE SEQADV 2IKB MSE B 48 UNP Q7DDI9 MET 48 MODIFIED RESIDUE SEQADV 2IKB MSE B 51 UNP Q7DDI9 MET 51 MODIFIED RESIDUE SEQADV 2IKB MSE B 73 UNP Q7DDI9 MET 73 MODIFIED RESIDUE SEQADV 2IKB MSE B 96 UNP Q7DDI9 MET 96 MODIFIED RESIDUE SEQADV 2IKB MSE C 1 UNP Q7DDI9 MET 1 MODIFIED RESIDUE SEQADV 2IKB MSE C 48 UNP Q7DDI9 MET 48 MODIFIED RESIDUE SEQADV 2IKB MSE C 51 UNP Q7DDI9 MET 51 MODIFIED RESIDUE SEQADV 2IKB MSE C 73 UNP Q7DDI9 MET 73 MODIFIED RESIDUE SEQADV 2IKB MSE C 96 UNP Q7DDI9 MET 96 MODIFIED RESIDUE SEQADV 2IKB MSE D 1 UNP Q7DDI9 MET 1 MODIFIED RESIDUE SEQADV 2IKB MSE D 48 UNP Q7DDI9 MET 48 MODIFIED RESIDUE SEQADV 2IKB MSE D 51 UNP Q7DDI9 MET 51 MODIFIED RESIDUE SEQADV 2IKB MSE D 73 UNP Q7DDI9 MET 73 MODIFIED RESIDUE SEQADV 2IKB MSE D 96 UNP Q7DDI9 MET 96 MODIFIED RESIDUE SEQRES 1 A 167 MSE SER ASP LYS PHE ASN GLN PHE ILE ASN ARG VAL LEU SEQRES 2 A 167 SER HIS GLU GLY GLY TYR ALA ASN HIS PRO LYS ASP PRO SEQRES 3 A 167 GLY GLY GLU THR ASN TRP GLY ILE THR LYS ARG THR ALA SEQRES 4 A 167 GLN ALA ASN GLY TYR ASN GLY SER MSE ARG ALA MSE THR SEQRES 5 A 167 ARG GLU GLN ALA ILE SER ILE TYR ARG LYS ALA PHE TRP SEQRES 6 A 167 GLU ARG TYR ARG ALA ASP GLN MSE PRO GLU ALA VAL ALA SEQRES 7 A 167 PHE GLN PHE PHE ASP ALA CYS VAL ASN HIS GLY TYR GLY SEQRES 8 A 167 ASN ALA ALA ARG MSE LEU GLN ARG ALA ALA GLY VAL PRO SEQRES 9 A 167 ASP ASP GLY VAL ILE GLY ALA VAL SER LEU LYS ALA ILE SEQRES 10 A 167 ASN SER LEU PRO GLU ASN ASP LEU LEU LEU ARG PHE ASN SEQRES 11 A 167 ALA GLU ARG LEU VAL PHE TYR THR LYS LEU GLY THR PHE SEQRES 12 A 167 THR SER PHE GLY LYS GLY TRP VAL ARG ARG VAL ALA GLN SEQRES 13 A 167 ASN LEU ILE HIS ALA SER ALA ASP ASN THR ASP SEQRES 1 B 167 MSE SER ASP LYS PHE ASN GLN PHE ILE ASN ARG VAL LEU SEQRES 2 B 167 SER HIS GLU GLY GLY TYR ALA ASN HIS PRO LYS ASP PRO SEQRES 3 B 167 GLY GLY GLU THR ASN TRP GLY ILE THR LYS ARG THR ALA SEQRES 4 B 167 GLN ALA ASN GLY TYR ASN GLY SER MSE ARG ALA MSE THR SEQRES 5 B 167 ARG GLU GLN ALA ILE SER ILE TYR ARG LYS ALA PHE TRP SEQRES 6 B 167 GLU ARG TYR ARG ALA ASP GLN MSE PRO GLU ALA VAL ALA SEQRES 7 B 167 PHE GLN PHE PHE ASP ALA CYS VAL ASN HIS GLY TYR GLY SEQRES 8 B 167 ASN ALA ALA ARG MSE LEU GLN ARG ALA ALA GLY VAL PRO SEQRES 9 B 167 ASP ASP GLY VAL ILE GLY ALA VAL SER LEU LYS ALA ILE SEQRES 10 B 167 ASN SER LEU PRO GLU ASN ASP LEU LEU LEU ARG PHE ASN SEQRES 11 B 167 ALA GLU ARG LEU VAL PHE TYR THR LYS LEU GLY THR PHE SEQRES 12 B 167 THR SER PHE GLY LYS GLY TRP VAL ARG ARG VAL ALA GLN SEQRES 13 B 167 ASN LEU ILE HIS ALA SER ALA ASP ASN THR ASP SEQRES 1 C 167 MSE SER ASP LYS PHE ASN GLN PHE ILE ASN ARG VAL LEU SEQRES 2 C 167 SER HIS GLU GLY GLY TYR ALA ASN HIS PRO LYS ASP PRO SEQRES 3 C 167 GLY GLY GLU THR ASN TRP GLY ILE THR LYS ARG THR ALA SEQRES 4 C 167 GLN ALA ASN GLY TYR ASN GLY SER MSE ARG ALA MSE THR SEQRES 5 C 167 ARG GLU GLN ALA ILE SER ILE TYR ARG LYS ALA PHE TRP SEQRES 6 C 167 GLU ARG TYR ARG ALA ASP GLN MSE PRO GLU ALA VAL ALA SEQRES 7 C 167 PHE GLN PHE PHE ASP ALA CYS VAL ASN HIS GLY TYR GLY SEQRES 8 C 167 ASN ALA ALA ARG MSE LEU GLN ARG ALA ALA GLY VAL PRO SEQRES 9 C 167 ASP ASP GLY VAL ILE GLY ALA VAL SER LEU LYS ALA ILE SEQRES 10 C 167 ASN SER LEU PRO GLU ASN ASP LEU LEU LEU ARG PHE ASN SEQRES 11 C 167 ALA GLU ARG LEU VAL PHE TYR THR LYS LEU GLY THR PHE SEQRES 12 C 167 THR SER PHE GLY LYS GLY TRP VAL ARG ARG VAL ALA GLN SEQRES 13 C 167 ASN LEU ILE HIS ALA SER ALA ASP ASN THR ASP SEQRES 1 D 167 MSE SER ASP LYS PHE ASN GLN PHE ILE ASN ARG VAL LEU SEQRES 2 D 167 SER HIS GLU GLY GLY TYR ALA ASN HIS PRO LYS ASP PRO SEQRES 3 D 167 GLY GLY GLU THR ASN TRP GLY ILE THR LYS ARG THR ALA SEQRES 4 D 167 GLN ALA ASN GLY TYR ASN GLY SER MSE ARG ALA MSE THR SEQRES 5 D 167 ARG GLU GLN ALA ILE SER ILE TYR ARG LYS ALA PHE TRP SEQRES 6 D 167 GLU ARG TYR ARG ALA ASP GLN MSE PRO GLU ALA VAL ALA SEQRES 7 D 167 PHE GLN PHE PHE ASP ALA CYS VAL ASN HIS GLY TYR GLY SEQRES 8 D 167 ASN ALA ALA ARG MSE LEU GLN ARG ALA ALA GLY VAL PRO SEQRES 9 D 167 ASP ASP GLY VAL ILE GLY ALA VAL SER LEU LYS ALA ILE SEQRES 10 D 167 ASN SER LEU PRO GLU ASN ASP LEU LEU LEU ARG PHE ASN SEQRES 11 D 167 ALA GLU ARG LEU VAL PHE TYR THR LYS LEU GLY THR PHE SEQRES 12 D 167 THR SER PHE GLY LYS GLY TRP VAL ARG ARG VAL ALA GLN SEQRES 13 D 167 ASN LEU ILE HIS ALA SER ALA ASP ASN THR ASP MODRES 2IKB MSE A 1 MET SELENOMETHIONINE MODRES 2IKB MSE A 48 MET SELENOMETHIONINE MODRES 2IKB MSE A 51 MET SELENOMETHIONINE MODRES 2IKB MSE A 73 MET SELENOMETHIONINE MODRES 2IKB MSE A 96 MET SELENOMETHIONINE MODRES 2IKB MSE B 48 MET SELENOMETHIONINE MODRES 2IKB MSE B 51 MET SELENOMETHIONINE MODRES 2IKB MSE B 73 MET SELENOMETHIONINE MODRES 2IKB MSE B 96 MET SELENOMETHIONINE MODRES 2IKB MSE C 1 MET SELENOMETHIONINE MODRES 2IKB MSE C 48 MET SELENOMETHIONINE MODRES 2IKB MSE C 51 MET SELENOMETHIONINE MODRES 2IKB MSE C 73 MET SELENOMETHIONINE MODRES 2IKB MSE C 96 MET SELENOMETHIONINE MODRES 2IKB MSE D 48 MET SELENOMETHIONINE MODRES 2IKB MSE D 51 MET SELENOMETHIONINE MODRES 2IKB MSE D 73 MET SELENOMETHIONINE MODRES 2IKB MSE D 96 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 48 8 HET MSE A 51 8 HET MSE A 73 8 HET MSE A 96 8 HET MSE B 48 8 HET MSE B 51 8 HET MSE B 73 8 HET MSE B 96 8 HET MSE C 1 8 HET MSE C 48 8 HET MSE C 51 8 HET MSE C 73 8 HET MSE C 96 8 HET MSE D 48 8 HET MSE D 51 8 HET MSE D 73 8 HET MSE D 96 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 5 HOH *557(H2 O) HELIX 1 1 MSE A 1 LEU A 13 1 13 HELIX 2 2 ASP A 25 GLY A 28 5 4 HELIX 3 3 LYS A 36 ASN A 42 1 7 HELIX 4 4 SER A 47 MSE A 51 5 5 HELIX 5 5 THR A 52 PHE A 64 1 13 HELIX 6 6 ARG A 69 MSE A 73 5 5 HELIX 7 7 PRO A 74 GLY A 89 1 16 HELIX 8 8 GLY A 89 ALA A 101 1 13 HELIX 9 9 GLY A 110 LEU A 120 1 11 HELIX 10 10 PRO A 121 GLY A 141 1 21 HELIX 11 11 THR A 144 SER A 162 1 19 HELIX 12 12 ASP B 3 LEU B 13 1 11 HELIX 13 13 ASP B 25 GLY B 28 5 4 HELIX 14 14 LYS B 36 ASN B 42 1 7 HELIX 15 15 SER B 47 MSE B 51 5 5 HELIX 16 16 THR B 52 PHE B 64 1 13 HELIX 17 17 PHE B 64 ARG B 69 1 6 HELIX 18 18 ALA B 70 MSE B 73 5 4 HELIX 19 19 PRO B 74 GLY B 89 1 16 HELIX 20 20 GLY B 89 GLY B 102 1 14 HELIX 21 21 GLY B 110 SER B 119 1 10 HELIX 22 22 PRO B 121 LEU B 140 1 20 HELIX 23 23 LYS B 148 SER B 162 1 15 HELIX 24 24 SER C 2 LEU C 13 1 12 HELIX 25 25 LYS C 36 ALA C 41 1 6 HELIX 26 26 THR C 52 PHE C 64 1 13 HELIX 27 27 ARG C 69 MSE C 73 5 5 HELIX 28 28 PRO C 74 GLY C 89 1 16 HELIX 29 29 GLY C 89 GLY C 102 1 14 HELIX 30 30 GLY C 110 LEU C 120 1 11 HELIX 31 31 PRO C 121 LYS C 139 1 19 HELIX 32 32 GLY C 149 SER C 162 1 14 HELIX 33 33 SER D 2 LEU D 13 1 12 HELIX 34 34 ASP D 25 GLY D 28 5 4 HELIX 35 35 LYS D 36 ALA D 41 1 6 HELIX 36 36 THR D 52 PHE D 64 1 13 HELIX 37 37 ARG D 69 MSE D 73 5 5 HELIX 38 38 PRO D 74 GLY D 89 1 16 HELIX 39 39 GLY D 89 GLY D 102 1 14 HELIX 40 40 GLY D 110 LEU D 120 1 11 HELIX 41 41 PRO D 121 LYS D 139 1 19 HELIX 42 42 THR D 144 PHE D 146 5 3 HELIX 43 43 GLY D 147 SER D 162 1 16 SHEET 1 A 2 THR A 30 ASN A 31 0 SHEET 2 A 2 ILE A 34 THR A 35 -1 O ILE A 34 N ASN A 31 SHEET 1 B 2 THR B 30 ASN B 31 0 SHEET 2 B 2 ILE B 34 THR B 35 -1 O ILE B 34 N ASN B 31 SHEET 1 C 2 THR C 30 ASN C 31 0 SHEET 2 C 2 ILE C 34 THR C 35 -1 O ILE C 34 N ASN C 31 SHEET 1 D 2 THR D 30 ASN D 31 0 SHEET 2 D 2 ILE D 34 THR D 35 -1 O ILE D 34 N ASN D 31 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C SER A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N ARG A 49 1555 1555 1.33 LINK C ALA A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N THR A 52 1555 1555 1.32 LINK C GLN A 72 N MSE A 73 1555 1555 1.32 LINK C MSE A 73 N PRO A 74 1555 1555 1.34 LINK C ARG A 95 N MSE A 96 1555 1555 1.34 LINK C MSE A 96 N LEU A 97 1555 1555 1.33 LINK C SER B 47 N MSE B 48 1555 1555 1.33 LINK C MSE B 48 N ARG B 49 1555 1555 1.34 LINK C ALA B 50 N MSE B 51 1555 1555 1.33 LINK C MSE B 51 N THR B 52 1555 1555 1.33 LINK C GLN B 72 N MSE B 73 1555 1555 1.33 LINK C MSE B 73 N PRO B 74 1555 1555 1.34 LINK C ARG B 95 N MSE B 96 1555 1555 1.33 LINK C MSE B 96 N LEU B 97 1555 1555 1.33 LINK C MSE C 1 N SER C 2 1555 1555 1.35 LINK C SER C 47 N MSE C 48 1555 1555 1.33 LINK C MSE C 48 N ARG C 49 1555 1555 1.33 LINK C ALA C 50 N MSE C 51 1555 1555 1.34 LINK C MSE C 51 N THR C 52 1555 1555 1.33 LINK C GLN C 72 N MSE C 73 1555 1555 1.33 LINK C MSE C 73 N PRO C 74 1555 1555 1.36 LINK C ARG C 95 N MSE C 96 1555 1555 1.34 LINK C MSE C 96 N LEU C 97 1555 1555 1.33 LINK C SER D 47 N MSE D 48 1555 1555 1.33 LINK C MSE D 48 N ARG D 49 1555 1555 1.33 LINK C ALA D 50 N MSE D 51 1555 1555 1.34 LINK C MSE D 51 N THR D 52 1555 1555 1.33 LINK C GLN D 72 N MSE D 73 1555 1555 1.33 LINK C MSE D 73 N PRO D 74 1555 1555 1.34 LINK C ARG D 95 N MSE D 96 1555 1555 1.33 LINK C MSE D 96 N LEU D 97 1555 1555 1.33 CRYST1 47.335 52.087 128.874 90.00 90.68 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021126 0.000000 0.000250 0.00000 SCALE2 0.000000 0.019199 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007760 0.00000 HETATM 1 N MSE A 1 36.007 19.451 110.859 1.00 53.08 N HETATM 2 CA MSE A 1 35.065 18.559 111.599 1.00 53.43 C HETATM 3 C MSE A 1 33.652 18.649 110.988 1.00 51.20 C HETATM 4 O MSE A 1 33.471 18.385 109.799 1.00 49.83 O HETATM 5 CB MSE A 1 35.083 18.946 113.072 1.00 53.82 C HETATM 6 CG MSE A 1 35.118 20.442 113.282 1.00 56.24 C HETATM 7 SE MSE A 1 34.170 20.983 114.893 1.00 62.90 SE HETATM 8 CE MSE A 1 32.484 21.561 114.075 1.00 56.90 C