HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-OCT-06 2IMH TITLE CRYSTAL STRUCTURE OF PROTEIN SPO2555 FROM SILICIBACTER POMEROYI, PFAM TITLE 2 DUF1028 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN UNP Q5LQD5_SILPO; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER POMEROYI; SOURCE 3 ORGANISM_TAXID: 89184; SOURCE 4 GENE: SPO2555; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,M.DICKEY,K.T.BAIN,A.SLOCOMBE,S.OZYURT,S.WASSERMAN, AUTHOR 2 S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (NYSGXRC) REVDAT 5 16-OCT-24 2IMH 1 REMARK REVDAT 4 03-FEB-21 2IMH 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 13-JUL-11 2IMH 1 VERSN REVDAT 2 24-FEB-09 2IMH 1 VERSN REVDAT 1 17-OCT-06 2IMH 0 JRNL AUTH J.B.BONANNO,M.DICKEY,K.T.BAIN,A.SLOCOMBE,S.OZYURT, JRNL AUTH 2 S.WASSERMAN,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN FROM SILICIBACTER JRNL TITL 2 POMEROYI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 3 NUMBER OF REFLECTIONS : 48829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2615 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 758 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 17.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3266 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : 1.95000 REMARK 3 B33 (A**2) : -1.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.656 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3426 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4678 ; 1.298 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 467 ; 7.257 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;36.117 ;24.248 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 520 ;11.289 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.000 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 525 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2673 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1743 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2401 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 431 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 53 ; 0.140 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 36 ; 0.124 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2297 ; 0.943 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3540 ; 1.134 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1262 ; 2.236 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1125 ; 3.252 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IMH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000039751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51467 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 27.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : 0.04400 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 560MM TRI-SODIUM CITRATE DIHYDRATE, PH REMARK 280 7, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.12500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.89600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.79700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.89600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.12500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.79700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: PROBABLE MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 SER A 156 REMARK 465 ASP A 157 REMARK 465 PHE A 158 REMARK 465 ARG A 159 REMARK 465 MSE B -1 REMARK 465 GLY B 155 REMARK 465 SER B 156 REMARK 465 ASP B 157 REMARK 465 PHE B 158 REMARK 465 ARG B 159 REMARK 465 GLU B 222 REMARK 465 GLY B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 222 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 310 O HOH A 479 1.60 REMARK 500 O HOH A 315 O HOH A 488 1.99 REMARK 500 O HOH B 315 O HOH B 479 1.99 REMARK 500 O HOH A 362 O HOH A 496 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 329 O HOH B 464 2565 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 37 -55.03 -146.84 REMARK 500 GLN A 43 -158.08 -151.41 REMARK 500 ALA A 111 104.80 -56.75 REMARK 500 SER A 112 11.55 88.17 REMARK 500 ASP A 185 -18.54 -144.19 REMARK 500 ASN A 186 70.69 -153.28 REMARK 500 ASP A 215 75.83 -156.67 REMARK 500 ALA B 37 -55.71 -137.55 REMARK 500 ASP B 185 -16.81 -142.54 REMARK 500 ASN B 186 62.05 -152.89 REMARK 500 ASP B 215 72.14 -156.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 105 GLY A 106 71.32 REMARK 500 LYS B 105 GLY B 106 62.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10119G RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 MSE -1 IS A MODIFIED RESIDUE AND AN INITIATING METHIONINE DBREF 2IMH A 2 221 UNP Q5LQD5 Q5LQD5_SILPO 2 221 DBREF 2IMH B 2 221 UNP Q5LQD5 Q5LQD5_SILPO 2 221 SEQADV 2IMH MSE A -1 UNP Q5LQD5 SEE REMARK 999 SEQADV 2IMH SER A 0 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH LEU A 1 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH MSE A 39 UNP Q5LQD5 MET 39 MODIFIED RESIDUE SEQADV 2IMH MSE A 87 UNP Q5LQD5 MET 87 MODIFIED RESIDUE SEQADV 2IMH MSE A 119 UNP Q5LQD5 MET 119 MODIFIED RESIDUE SEQADV 2IMH MSE A 129 UNP Q5LQD5 MET 129 MODIFIED RESIDUE SEQADV 2IMH MSE A 166 UNP Q5LQD5 MET 166 MODIFIED RESIDUE SEQADV 2IMH GLU A 222 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH GLY A 223 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH HIS A 224 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS A 225 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS A 226 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS A 227 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS A 228 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS A 229 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH MSE B -1 UNP Q5LQD5 SEE REMARK 999 SEQADV 2IMH SER B 0 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH LEU B 1 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH MSE B 39 UNP Q5LQD5 MET 39 MODIFIED RESIDUE SEQADV 2IMH MSE B 87 UNP Q5LQD5 MET 87 MODIFIED RESIDUE SEQADV 2IMH MSE B 119 UNP Q5LQD5 MET 119 MODIFIED RESIDUE SEQADV 2IMH MSE B 129 UNP Q5LQD5 MET 129 MODIFIED RESIDUE SEQADV 2IMH MSE B 166 UNP Q5LQD5 MET 166 MODIFIED RESIDUE SEQADV 2IMH GLU B 222 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH GLY B 223 UNP Q5LQD5 CLONING ARTIFACT SEQADV 2IMH HIS B 224 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS B 225 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS B 226 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS B 227 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS B 228 UNP Q5LQD5 EXPRESSION TAG SEQADV 2IMH HIS B 229 UNP Q5LQD5 EXPRESSION TAG SEQRES 1 A 231 MSE SER LEU THR PHE SER ILE LEU ALA HIS ASP PRO GLU SEQRES 2 A 231 THR GLY ALA ILE GLY GLY ALA ALA ALA THR GLY SER LEU SEQRES 3 A 231 CYS VAL GLY GLY TRP VAL LEU ARG GLY ASP LEU ASN ALA SEQRES 4 A 231 GLY MSE SER ALA SER GLN GLY ALA ALA PRO SER THR PHE SEQRES 5 A 231 TRP GLY GLU GLU VAL LEU GLN HIS LEU ARG ASP GLY SER SEQRES 6 A 231 HIS PRO GLU ASP ALA VAL ASN HIS VAL THR SER GLN ASP SEQRES 7 A 231 SER GLY ARG ALA TYR ARG GLN LEU ALA ALA MSE ASP LEU SEQRES 8 A 231 LEU GLY ASN ALA ALA ALA PHE THR GLY SER GLU ASN GLN SEQRES 9 A 231 ASP ILE LYS GLY SER VAL THR PHE ALA SER GLY ILE ALA SEQRES 10 A 231 SER GLY ASN MSE LEU GLY ASP ASN SER VAL LEU GLY ALA SEQRES 11 A 231 MSE THR GLU ALA PHE VAL ALA SER ASP LEU THR PHE GLU SEQRES 12 A 231 ARG ARG LEU LEU ALA ALA LEU ILE ALA ALA GLU GLY ALA SEQRES 13 A 231 GLY SER ASP PHE ARG GLY LEU LEU SER ALA ALA MSE LEU SEQRES 14 A 231 VAL LEU HIS PRO ASP ARG PRO PRO VAL THR LEU ARG ILE SEQRES 15 A 231 ASP TYR HIS PRO ASP ASN PRO ILE GLY ALA LEU GLU GLN SEQRES 16 A 231 LEU TYR GLN LYS ALA THR THR GLY ASP TYR ALA ASP TRP SEQRES 17 A 231 ALA ARG GLN VAL PRO VAL LEU SER ASP LYS GLU ARG ILE SEQRES 18 A 231 LEU ASP GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 231 MSE SER LEU THR PHE SER ILE LEU ALA HIS ASP PRO GLU SEQRES 2 B 231 THR GLY ALA ILE GLY GLY ALA ALA ALA THR GLY SER LEU SEQRES 3 B 231 CYS VAL GLY GLY TRP VAL LEU ARG GLY ASP LEU ASN ALA SEQRES 4 B 231 GLY MSE SER ALA SER GLN GLY ALA ALA PRO SER THR PHE SEQRES 5 B 231 TRP GLY GLU GLU VAL LEU GLN HIS LEU ARG ASP GLY SER SEQRES 6 B 231 HIS PRO GLU ASP ALA VAL ASN HIS VAL THR SER GLN ASP SEQRES 7 B 231 SER GLY ARG ALA TYR ARG GLN LEU ALA ALA MSE ASP LEU SEQRES 8 B 231 LEU GLY ASN ALA ALA ALA PHE THR GLY SER GLU ASN GLN SEQRES 9 B 231 ASP ILE LYS GLY SER VAL THR PHE ALA SER GLY ILE ALA SEQRES 10 B 231 SER GLY ASN MSE LEU GLY ASP ASN SER VAL LEU GLY ALA SEQRES 11 B 231 MSE THR GLU ALA PHE VAL ALA SER ASP LEU THR PHE GLU SEQRES 12 B 231 ARG ARG LEU LEU ALA ALA LEU ILE ALA ALA GLU GLY ALA SEQRES 13 B 231 GLY SER ASP PHE ARG GLY LEU LEU SER ALA ALA MSE LEU SEQRES 14 B 231 VAL LEU HIS PRO ASP ARG PRO PRO VAL THR LEU ARG ILE SEQRES 15 B 231 ASP TYR HIS PRO ASP ASN PRO ILE GLY ALA LEU GLU GLN SEQRES 16 B 231 LEU TYR GLN LYS ALA THR THR GLY ASP TYR ALA ASP TRP SEQRES 17 B 231 ALA ARG GLN VAL PRO VAL LEU SER ASP LYS GLU ARG ILE SEQRES 18 B 231 LEU ASP GLU GLY HIS HIS HIS HIS HIS HIS MODRES 2IMH MSE A 39 MET SELENOMETHIONINE MODRES 2IMH MSE A 87 MET SELENOMETHIONINE MODRES 2IMH MSE A 119 MET SELENOMETHIONINE MODRES 2IMH MSE A 129 MET SELENOMETHIONINE MODRES 2IMH MSE A 166 MET SELENOMETHIONINE MODRES 2IMH MSE B 39 MET SELENOMETHIONINE MODRES 2IMH MSE B 87 MET SELENOMETHIONINE MODRES 2IMH MSE B 119 MET SELENOMETHIONINE MODRES 2IMH MSE B 129 MET SELENOMETHIONINE MODRES 2IMH MSE B 166 MET SELENOMETHIONINE HET MSE A 39 8 HET MSE A 87 8 HET MSE A 119 13 HET MSE A 129 8 HET MSE A 166 13 HET MSE B 39 8 HET MSE B 87 8 HET MSE B 119 13 HET MSE B 129 8 HET MSE B 166 13 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 HOH *550(H2 O) HELIX 1 1 CYS A 25 VAL A 30 1 6 HELIX 2 2 SER A 48 ASP A 61 1 14 HELIX 3 3 HIS A 64 GLN A 75 1 12 HELIX 4 4 GLY A 78 TYR A 81 5 4 HELIX 5 5 ASN A 123 SER A 136 1 14 HELIX 6 6 THR A 139 ALA A 154 1 16 HELIX 7 7 ASN A 186 THR A 199 1 14 HELIX 8 8 THR A 200 ARG A 208 1 9 HELIX 9 9 CYS B 25 VAL B 30 1 6 HELIX 10 10 SER B 48 ASP B 61 1 14 HELIX 11 11 HIS B 64 GLN B 75 1 12 HELIX 12 12 GLY B 78 TYR B 81 5 4 HELIX 13 13 SER B 124 SER B 136 1 13 HELIX 14 14 THR B 139 ALA B 154 1 16 HELIX 15 15 ASN B 186 THR B 199 1 14 HELIX 16 16 THR B 200 ARG B 208 1 9 SHEET 1 A 6 GLY A 106 PHE A 110 0 SHEET 2 A 6 GLY A 113 ASN A 118 -1 O ALA A 115 N VAL A 108 SHEET 3 A 6 THR A 2 HIS A 8 -1 N LEU A 6 O ILE A 114 SHEET 4 A 6 ILE A 15 THR A 21 -1 O GLY A 16 N ALA A 7 SHEET 5 A 6 SER A 163 HIS A 170 -1 O LEU A 169 N ILE A 15 SHEET 6 A 6 ARG A 173 ILE A 180 -1 O ILE A 180 N ALA A 164 SHEET 1 B 4 LEU A 31 ASP A 34 0 SHEET 2 B 4 GLY A 38 GLN A 43 -1 O SER A 40 N ARG A 32 SHEET 3 B 4 GLN A 83 ASP A 88 -1 O GLN A 83 N GLN A 43 SHEET 4 B 4 ALA A 93 THR A 97 -1 O PHE A 96 N LEU A 84 SHEET 1 C 6 GLY B 106 PHE B 110 0 SHEET 2 C 6 GLY B 113 ASN B 118 -1 O ALA B 115 N VAL B 108 SHEET 3 C 6 THR B 2 HIS B 8 -1 N LEU B 6 O ILE B 114 SHEET 4 C 6 ILE B 15 THR B 21 -1 O GLY B 16 N ALA B 7 SHEET 5 C 6 SER B 163 HIS B 170 -1 O LEU B 169 N ILE B 15 SHEET 6 C 6 ARG B 173 ILE B 180 -1 O ILE B 180 N ALA B 164 SHEET 1 D 4 LEU B 31 ASP B 34 0 SHEET 2 D 4 GLY B 38 GLN B 43 -1 O SER B 40 N ARG B 32 SHEET 3 D 4 GLN B 83 MSE B 87 -1 O GLN B 83 N GLN B 43 SHEET 4 D 4 ALA B 93 THR B 97 -1 O PHE B 96 N LEU B 84 LINK C GLY A 38 N MSE A 39 1555 1555 1.34 LINK C MSE A 39 N SER A 40 1555 1555 1.33 LINK C ALA A 86 N MSE A 87 1555 1555 1.33 LINK C MSE A 87 N ASP A 88 1555 1555 1.33 LINK C ASN A 118 N MSE A 119 1555 1555 1.33 LINK C MSE A 119 N LEU A 120 1555 1555 1.33 LINK C ALA A 128 N MSE A 129 1555 1555 1.33 LINK C MSE A 129 N THR A 130 1555 1555 1.33 LINK C ALA A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N LEU A 167 1555 1555 1.33 LINK C GLY B 38 N MSE B 39 1555 1555 1.34 LINK C MSE B 39 N SER B 40 1555 1555 1.34 LINK C ALA B 86 N MSE B 87 1555 1555 1.33 LINK C MSE B 87 N ASP B 88 1555 1555 1.34 LINK NE2BGLN B 102 CE BMSE B 119 1555 1555 1.19 LINK OE1BGLN B 102 SE BMSE B 119 1555 1555 1.89 LINK CD BGLN B 102 SE BMSE B 119 1555 1555 1.78 LINK NE2BGLN B 102 SE BMSE B 119 1555 1555 1.55 LINK OE1BGLN B 102 CE BMSE B 119 1555 1555 1.94 LINK CG BGLN B 102 CE BMSE B 119 1555 1555 1.32 LINK C ASN B 118 N MSE B 119 1555 1555 1.33 LINK C MSE B 119 N LEU B 120 1555 1555 1.33 LINK C ALA B 128 N MSE B 129 1555 1555 1.33 LINK C MSE B 129 N THR B 130 1555 1555 1.33 LINK C ALA B 165 N MSE B 166 1555 1555 1.32 LINK C MSE B 166 N LEU B 167 1555 1555 1.33 CISPEP 1 ASP A 103 ILE A 104 0 -5.90 CISPEP 2 ASP B 103 ILE B 104 0 -6.11 CRYST1 60.250 69.594 105.792 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016598 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014369 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009453 0.00000