data_2IVT # _entry.id 2IVT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2IVT pdb_00002ivt 10.2210/pdb2ivt/pdb PDBE EBI-29133 ? ? WWPDB D_1290029133 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1XPD unspecified 'THEORETICAL MODEL OF RET_HUMAN' PDB 2IVS unspecified 'CRYSTAL STRUCTURE OF NON-PHOSPHORYLATED RET TYROSINE KINASE DOMAIN' PDB 2IVU unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN COMPLEXED WITH THE INHIBITOR ZD6474' PDB 2IVV unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN COMPLEXED WITH THE INHIBITOR PP1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IVT _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-06-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Knowles, P.P.' 1 ? 'Murray-Rust, J.' 2 ? 'McDonald, N.Q.' 3 ? # _citation.id primary _citation.title 'Structure and chemical inhibition of the RET tyrosine kinase domain.' _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_volume 281 _citation.page_first 33577 _citation.page_last 33587 _citation.year 2006 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16928683 _citation.pdbx_database_id_DOI 10.1074/jbc.M605604200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Knowles, P.P.' 1 ? primary 'Murray-Rust, J.' 2 ? primary 'Kjaer, S.' 3 ? primary 'Scott, R.P.' 4 ? primary 'Hanrahan, S.' 5 ? primary 'Santoro, M.' 6 ? primary 'Ibanez, C.F.' 7 ? primary 'McDonald, N.Q.' 8 ? # _cell.entry_id 2IVT _cell.length_a 72.131 _cell.length_b 70.848 _cell.length_c 78.916 _cell.angle_alpha 90.00 _cell.angle_beta 101.13 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IVT _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET PRECURSOR' 35788.215 1 2.7.10.1 ? 'TYROSINE KINASE DOMAIN, RESIDUES 705-1013' 'PTR AT 905' 2 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 3 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RET RECEPTOR, C-RET' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS(PTR)VKRSQGRIPVKWMAIESLFDHIYTTQSDVW SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV LLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 SER n 1 5 LEU n 1 6 SER n 1 7 VAL n 1 8 ASP n 1 9 ALA n 1 10 PHE n 1 11 LYS n 1 12 ILE n 1 13 LEU n 1 14 GLU n 1 15 ASP n 1 16 PRO n 1 17 LYS n 1 18 TRP n 1 19 GLU n 1 20 PHE n 1 21 PRO n 1 22 ARG n 1 23 LYS n 1 24 ASN n 1 25 LEU n 1 26 VAL n 1 27 LEU n 1 28 GLY n 1 29 LYS n 1 30 THR n 1 31 LEU n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 PHE n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 VAL n 1 41 LYS n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 LEU n 1 48 LYS n 1 49 GLY n 1 50 ARG n 1 51 ALA n 1 52 GLY n 1 53 TYR n 1 54 THR n 1 55 THR n 1 56 VAL n 1 57 ALA n 1 58 VAL n 1 59 LYS n 1 60 MET n 1 61 LEU n 1 62 LYS n 1 63 GLU n 1 64 ASN n 1 65 ALA n 1 66 SER n 1 67 PRO n 1 68 SER n 1 69 GLU n 1 70 LEU n 1 71 ARG n 1 72 ASP n 1 73 LEU n 1 74 LEU n 1 75 SER n 1 76 GLU n 1 77 PHE n 1 78 ASN n 1 79 VAL n 1 80 LEU n 1 81 LYS n 1 82 GLN n 1 83 VAL n 1 84 ASN n 1 85 HIS n 1 86 PRO n 1 87 HIS n 1 88 VAL n 1 89 ILE n 1 90 LYS n 1 91 LEU n 1 92 TYR n 1 93 GLY n 1 94 ALA n 1 95 CYS n 1 96 SER n 1 97 GLN n 1 98 ASP n 1 99 GLY n 1 100 PRO n 1 101 LEU n 1 102 LEU n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 GLU n 1 107 TYR n 1 108 ALA n 1 109 LYS n 1 110 TYR n 1 111 GLY n 1 112 SER n 1 113 LEU n 1 114 ARG n 1 115 GLY n 1 116 PHE n 1 117 LEU n 1 118 ARG n 1 119 GLU n 1 120 SER n 1 121 ARG n 1 122 LYS n 1 123 VAL n 1 124 GLY n 1 125 PRO n 1 126 GLY n 1 127 TYR n 1 128 LEU n 1 129 GLY n 1 130 SER n 1 131 GLY n 1 132 GLY n 1 133 SER n 1 134 ARG n 1 135 ASN n 1 136 SER n 1 137 SER n 1 138 SER n 1 139 LEU n 1 140 ASP n 1 141 HIS n 1 142 PRO n 1 143 ASP n 1 144 GLU n 1 145 ARG n 1 146 ALA n 1 147 LEU n 1 148 THR n 1 149 MET n 1 150 GLY n 1 151 ASP n 1 152 LEU n 1 153 ILE n 1 154 SER n 1 155 PHE n 1 156 ALA n 1 157 TRP n 1 158 GLN n 1 159 ILE n 1 160 SER n 1 161 GLN n 1 162 GLY n 1 163 MET n 1 164 GLN n 1 165 TYR n 1 166 LEU n 1 167 ALA n 1 168 GLU n 1 169 MET n 1 170 LYS n 1 171 LEU n 1 172 VAL n 1 173 HIS n 1 174 ARG n 1 175 ASP n 1 176 LEU n 1 177 ALA n 1 178 ALA n 1 179 ARG n 1 180 ASN n 1 181 ILE n 1 182 LEU n 1 183 VAL n 1 184 ALA n 1 185 GLU n 1 186 GLY n 1 187 ARG n 1 188 LYS n 1 189 MET n 1 190 LYS n 1 191 ILE n 1 192 SER n 1 193 ASP n 1 194 PHE n 1 195 GLY n 1 196 LEU n 1 197 SER n 1 198 ARG n 1 199 ASP n 1 200 VAL n 1 201 TYR n 1 202 GLU n 1 203 GLU n 1 204 ASP n 1 205 SER n 1 206 PTR n 1 207 VAL n 1 208 LYS n 1 209 ARG n 1 210 SER n 1 211 GLN n 1 212 GLY n 1 213 ARG n 1 214 ILE n 1 215 PRO n 1 216 VAL n 1 217 LYS n 1 218 TRP n 1 219 MET n 1 220 ALA n 1 221 ILE n 1 222 GLU n 1 223 SER n 1 224 LEU n 1 225 PHE n 1 226 ASP n 1 227 HIS n 1 228 ILE n 1 229 TYR n 1 230 THR n 1 231 THR n 1 232 GLN n 1 233 SER n 1 234 ASP n 1 235 VAL n 1 236 TRP n 1 237 SER n 1 238 PHE n 1 239 GLY n 1 240 VAL n 1 241 LEU n 1 242 LEU n 1 243 TRP n 1 244 GLU n 1 245 ILE n 1 246 VAL n 1 247 THR n 1 248 LEU n 1 249 GLY n 1 250 GLY n 1 251 ASN n 1 252 PRO n 1 253 TYR n 1 254 PRO n 1 255 GLY n 1 256 ILE n 1 257 PRO n 1 258 PRO n 1 259 GLU n 1 260 ARG n 1 261 LEU n 1 262 PHE n 1 263 ASN n 1 264 LEU n 1 265 LEU n 1 266 LYS n 1 267 THR n 1 268 GLY n 1 269 HIS n 1 270 ARG n 1 271 MET n 1 272 GLU n 1 273 ARG n 1 274 PRO n 1 275 ASP n 1 276 ASN n 1 277 CYS n 1 278 SER n 1 279 GLU n 1 280 GLU n 1 281 MET n 1 282 TYR n 1 283 ARG n 1 284 LEU n 1 285 MET n 1 286 LEU n 1 287 GLN n 1 288 CYS n 1 289 TRP n 1 290 LYS n 1 291 GLN n 1 292 GLU n 1 293 PRO n 1 294 ASP n 1 295 LYS n 1 296 ARG n 1 297 PRO n 1 298 VAL n 1 299 PHE n 1 300 ALA n 1 301 ASP n 1 302 ILE n 1 303 SER n 1 304 LYS n 1 305 ASP n 1 306 LEU n 1 307 GLU n 1 308 LYS n 1 309 MET n 1 310 MET n 1 311 VAL n 1 312 LYS n 1 313 ARG n 1 314 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PBACPAK-HIS3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2IVT 1 ? ? 2IVT ? 2 UNP RET_HUMAN 1 ? ? P07949 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2IVT A 1 ? 5 ? 2IVT 700 ? 704 ? 700 704 2 2 2IVT A 6 ? 314 ? P07949 705 ? 1013 ? 705 1013 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2IVT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 57.7 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN 3 MG/ML IN 20 MM TRIS-HCL PH 8.0, 100MM NACL, 1MM DTT RESERVOIR 2.0 M SODIUM FORMATE, 0.1M SODIUM CITRATE PH 5.5,2.5MM ATP 5MM MAGNESIUM CHLORIDE VAPOUR DIFFUSION, SITTING DROP, 295 K ; # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2003-06-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_wavelength 0.978 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2IVT _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.500 _reflns.d_resolution_high 2.600 _reflns.number_obs 12129 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.05000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.4000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.600 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.13000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.100 _reflns_shell.pdbx_redundancy 3.70 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2IVT _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11547 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.249 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 581 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.937 _refine.correlation_coeff_Fo_to_Fc_free 0.890 _refine.B_iso_mean 23.25 _refine.aniso_B[1][1] 0.17000 _refine.aniso_B[2][2] 0.52000 _refine.aniso_B[3][3] -0.67000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.05000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1GJO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.496 _refine.pdbx_overall_ESU_R_Free 0.295 _refine.overall_SU_ML 0.213 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.870 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2230 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 2321 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2317 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.689 1.982 ? 3139 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.848 5.000 ? 288 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.076 23.258 ? 89 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.450 15.000 ? 387 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.754 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.107 0.200 ? 349 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1704 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.205 0.200 ? 1027 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 1582 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.130 0.200 ? 92 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.207 0.200 ? 54 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.113 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.853 1.500 ? 1482 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.488 2.000 ? 2298 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.326 3.000 ? 970 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.384 4.500 ? 840 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 865 _refine_ls_shell.R_factor_R_work 0.2490 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3350 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2IVT _struct.title 'Crystal structure of phosphorylated RET tyrosine kinase domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IVT _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;NUCLEOTIDE-BINDING, HIRSCHSPRUNG DISEASE, PHOSPHORYLATION, DISEASE MUTATION, PHOSPHOTRANSFERASE, TYROSINE-PROTEIN KINASE, CHROMOSOMAL TRANSLOCATION, POLYMORPHISM, GDNF RECEPTOR, TRANSMEMBRANE, PROTO-ONCOGENE, TYROSINE KINASE, RET, KINASE, MEMBRANE, ATP-BINDING, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ILE A 12 ? GLY A 700 ILE A 711 1 ? 12 HELX_P HELX_P2 2 PRO A 21 ? LYS A 23 ? PRO A 720 LYS A 722 5 ? 3 HELX_P HELX_P3 3 SER A 66 ? LYS A 81 ? SER A 765 LYS A 780 1 ? 16 HELX_P HELX_P4 4 SER A 112 ? GLU A 119 ? SER A 811 GLU A 818 1 ? 8 HELX_P HELX_P5 5 THR A 148 ? MET A 169 ? THR A 847 MET A 868 1 ? 22 HELX_P HELX_P6 6 ALA A 177 ? ARG A 179 ? ALA A 876 ARG A 878 5 ? 3 HELX_P HELX_P7 7 PRO A 215 ? MET A 219 ? PRO A 914 MET A 918 5 ? 5 HELX_P HELX_P8 8 ALA A 220 ? HIS A 227 ? ALA A 919 HIS A 926 1 ? 8 HELX_P HELX_P9 9 THR A 230 ? THR A 247 ? THR A 929 THR A 946 1 ? 18 HELX_P HELX_P10 10 PRO A 257 ? GLU A 259 ? PRO A 956 GLU A 958 5 ? 3 HELX_P HELX_P11 11 ARG A 260 ? THR A 267 ? ARG A 959 THR A 966 1 ? 8 HELX_P HELX_P12 12 SER A 278 ? TRP A 289 ? SER A 977 TRP A 988 1 ? 12 HELX_P HELX_P13 13 GLU A 292 ? ARG A 296 ? GLU A 991 ARG A 995 5 ? 5 HELX_P HELX_P14 14 VAL A 298 ? LYS A 312 ? VAL A 997 LYS A 1011 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 205 C ? ? ? 1_555 A PTR 206 N ? ? A SER 904 A PTR 905 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A PTR 206 C ? ? ? 1_555 A VAL 207 N ? ? A PTR 905 A VAL 906 1_555 ? ? ? ? ? ? ? 1.322 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? AC ? 2 ? AD ? 2 ? AE ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 25 ? GLU A 33 ? LEU A 724 GLU A 732 AA 2 GLY A 37 ? PHE A 45 ? GLY A 736 PHE A 744 AA 3 TYR A 53 ? LEU A 61 ? TYR A 752 LEU A 760 AA 4 LEU A 102 ? GLU A 106 ? LEU A 801 GLU A 805 AA 5 LEU A 91 ? CYS A 95 ? LEU A 790 CYS A 794 AB 1 ARG A 121 ? LYS A 122 ? ARG A 820 LYS A 821 AB 2 ALA A 146 ? LEU A 147 ? ALA A 845 LEU A 846 AC 1 LEU A 171 ? VAL A 172 ? LEU A 870 VAL A 871 AC 2 ARG A 198 ? ASP A 199 ? ARG A 897 ASP A 898 AD 1 ILE A 181 ? ALA A 184 ? ILE A 880 ALA A 883 AD 2 LYS A 188 ? ILE A 191 ? LYS A 887 ILE A 890 AE 1 PTR A 206 ? VAL A 207 ? PTR A 905 VAL A 906 AE 2 ILE A 228 ? TYR A 229 ? ILE A 927 TYR A 928 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 31 ? N LEU A 730 O VAL A 39 ? O VAL A 738 AA 2 3 N ALA A 44 ? N ALA A 743 O THR A 54 ? O THR A 753 AA 3 4 N LYS A 59 ? N LYS A 758 O LEU A 103 ? O LEU A 802 AA 4 5 O ILE A 104 ? O ILE A 803 N TYR A 92 ? N TYR A 791 AB 1 2 O ARG A 121 ? O ARG A 820 N LEU A 147 ? N LEU A 846 AC 1 2 N VAL A 172 ? N VAL A 871 O ARG A 198 ? O ARG A 897 AD 1 2 N ALA A 184 ? N ALA A 883 O LYS A 188 ? O LYS A 887 AE 1 2 N PTR A 206 ? N PTR A 905 O TYR A 229 ? O TYR A 928 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE AMP A3015' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE FMT A3013' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE FMT A3014' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 LEU A 31 ? LEU A 730 . ? 1_555 ? 2 AC1 14 GLY A 32 ? GLY A 731 . ? 1_555 ? 3 AC1 14 GLU A 33 ? GLU A 732 . ? 1_555 ? 4 AC1 14 GLY A 34 ? GLY A 733 . ? 1_555 ? 5 AC1 14 VAL A 39 ? VAL A 738 . ? 1_555 ? 6 AC1 14 ALA A 57 ? ALA A 756 . ? 1_555 ? 7 AC1 14 LYS A 59 ? LYS A 758 . ? 1_555 ? 8 AC1 14 GLU A 106 ? GLU A 805 . ? 1_555 ? 9 AC1 14 ALA A 108 ? ALA A 807 . ? 1_555 ? 10 AC1 14 ARG A 179 ? ARG A 878 . ? 1_555 ? 11 AC1 14 ASN A 180 ? ASN A 879 . ? 1_555 ? 12 AC1 14 LEU A 182 ? LEU A 881 . ? 1_555 ? 13 AC1 14 ASP A 193 ? ASP A 892 . ? 1_555 ? 14 AC1 14 HOH E . ? HOH A 2062 . ? 1_555 ? 15 AC2 7 GLY A 1 ? GLY A 700 . ? 1_555 ? 16 AC2 7 PRO A 2 ? PRO A 701 . ? 1_555 ? 17 AC2 7 LEU A 3 ? LEU A 702 . ? 1_555 ? 18 AC2 7 SER A 4 ? SER A 703 . ? 1_555 ? 19 AC2 7 GLN A 211 ? GLN A 910 . ? 1_555 ? 20 AC2 7 LEU A 224 ? LEU A 923 . ? 1_555 ? 21 AC2 7 HIS A 227 ? HIS A 926 . ? 1_555 ? 22 AC3 5 ARG A 174 ? ARG A 873 . ? 1_555 ? 23 AC3 5 LEU A 196 ? LEU A 895 . ? 1_555 ? 24 AC3 5 LYS A 208 ? LYS A 907 . ? 1_555 ? 25 AC3 5 GLY A 212 ? GLY A 911 . ? 1_555 ? 26 AC3 5 ARG A 213 ? ARG A 912 . ? 1_555 ? # _database_PDB_matrix.entry_id 2IVT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2IVT _atom_sites.fract_transf_matrix[1][1] 0.013864 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002727 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014115 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012915 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 700 700 GLY GLY A . n A 1 2 PRO 2 701 701 PRO PRO A . n A 1 3 LEU 3 702 702 LEU LEU A . n A 1 4 SER 4 703 703 SER SER A . n A 1 5 LEU 5 704 704 LEU LEU A . n A 1 6 SER 6 705 705 SER SER A . n A 1 7 VAL 7 706 706 VAL VAL A . n A 1 8 ASP 8 707 707 ASP ASP A . n A 1 9 ALA 9 708 708 ALA ALA A . n A 1 10 PHE 10 709 709 PHE PHE A . n A 1 11 LYS 11 710 710 LYS LYS A . n A 1 12 ILE 12 711 711 ILE ILE A . n A 1 13 LEU 13 712 ? ? ? A . n A 1 14 GLU 14 713 ? ? ? A . n A 1 15 ASP 15 714 ? ? ? A . n A 1 16 PRO 16 715 715 PRO PRO A . n A 1 17 LYS 17 716 716 LYS LYS A . n A 1 18 TRP 18 717 717 TRP TRP A . n A 1 19 GLU 19 718 718 GLU GLU A . n A 1 20 PHE 20 719 719 PHE PHE A . n A 1 21 PRO 21 720 720 PRO PRO A . n A 1 22 ARG 22 721 721 ARG ARG A . n A 1 23 LYS 23 722 722 LYS LYS A . n A 1 24 ASN 24 723 723 ASN ASN A . n A 1 25 LEU 25 724 724 LEU LEU A . n A 1 26 VAL 26 725 725 VAL VAL A . n A 1 27 LEU 27 726 726 LEU LEU A . n A 1 28 GLY 28 727 727 GLY GLY A . n A 1 29 LYS 29 728 728 LYS LYS A . n A 1 30 THR 30 729 729 THR THR A . n A 1 31 LEU 31 730 730 LEU LEU A . n A 1 32 GLY 32 731 731 GLY GLY A . n A 1 33 GLU 33 732 732 GLU GLU A . n A 1 34 GLY 34 733 733 GLY GLY A . n A 1 35 GLU 35 734 734 GLU GLU A . n A 1 36 PHE 36 735 735 PHE PHE A . n A 1 37 GLY 37 736 736 GLY GLY A . n A 1 38 LYS 38 737 737 LYS LYS A . n A 1 39 VAL 39 738 738 VAL VAL A . n A 1 40 VAL 40 739 739 VAL VAL A . n A 1 41 LYS 41 740 740 LYS LYS A . n A 1 42 ALA 42 741 741 ALA ALA A . n A 1 43 THR 43 742 742 THR THR A . n A 1 44 ALA 44 743 743 ALA ALA A . n A 1 45 PHE 45 744 744 PHE PHE A . n A 1 46 HIS 46 745 745 HIS HIS A . n A 1 47 LEU 47 746 746 LEU LEU A . n A 1 48 LYS 48 747 747 LYS LYS A . n A 1 49 GLY 49 748 748 GLY GLY A . n A 1 50 ARG 50 749 749 ARG ARG A . n A 1 51 ALA 51 750 750 ALA ALA A . n A 1 52 GLY 52 751 751 GLY GLY A . n A 1 53 TYR 53 752 752 TYR TYR A . n A 1 54 THR 54 753 753 THR THR A . n A 1 55 THR 55 754 754 THR THR A . n A 1 56 VAL 56 755 755 VAL VAL A . n A 1 57 ALA 57 756 756 ALA ALA A . n A 1 58 VAL 58 757 757 VAL VAL A . n A 1 59 LYS 59 758 758 LYS LYS A . n A 1 60 MET 60 759 759 MET MET A . n A 1 61 LEU 61 760 760 LEU LEU A . n A 1 62 LYS 62 761 761 LYS LYS A . n A 1 63 GLU 63 762 762 GLU GLU A . n A 1 64 ASN 64 763 763 ASN ASN A . n A 1 65 ALA 65 764 764 ALA ALA A . n A 1 66 SER 66 765 765 SER SER A . n A 1 67 PRO 67 766 766 PRO PRO A . n A 1 68 SER 68 767 767 SER SER A . n A 1 69 GLU 69 768 768 GLU GLU A . n A 1 70 LEU 70 769 769 LEU LEU A . n A 1 71 ARG 71 770 770 ARG ARG A . n A 1 72 ASP 72 771 771 ASP ASP A . n A 1 73 LEU 73 772 772 LEU LEU A . n A 1 74 LEU 74 773 773 LEU LEU A . n A 1 75 SER 75 774 774 SER SER A . n A 1 76 GLU 76 775 775 GLU GLU A . n A 1 77 PHE 77 776 776 PHE PHE A . n A 1 78 ASN 78 777 777 ASN ASN A . n A 1 79 VAL 79 778 778 VAL VAL A . n A 1 80 LEU 80 779 779 LEU LEU A . n A 1 81 LYS 81 780 780 LYS LYS A . n A 1 82 GLN 82 781 781 GLN GLN A . n A 1 83 VAL 83 782 782 VAL VAL A . n A 1 84 ASN 84 783 783 ASN ASN A . n A 1 85 HIS 85 784 784 HIS HIS A . n A 1 86 PRO 86 785 785 PRO PRO A . n A 1 87 HIS 87 786 786 HIS HIS A . n A 1 88 VAL 88 787 787 VAL VAL A . n A 1 89 ILE 89 788 788 ILE ILE A . n A 1 90 LYS 90 789 789 LYS LYS A . n A 1 91 LEU 91 790 790 LEU LEU A . n A 1 92 TYR 92 791 791 TYR TYR A . n A 1 93 GLY 93 792 792 GLY GLY A . n A 1 94 ALA 94 793 793 ALA ALA A . n A 1 95 CYS 95 794 794 CYS CYS A . n A 1 96 SER 96 795 795 SER SER A . n A 1 97 GLN 97 796 796 GLN GLN A . n A 1 98 ASP 98 797 797 ASP ASP A . n A 1 99 GLY 99 798 798 GLY GLY A . n A 1 100 PRO 100 799 799 PRO PRO A . n A 1 101 LEU 101 800 800 LEU LEU A . n A 1 102 LEU 102 801 801 LEU LEU A . n A 1 103 LEU 103 802 802 LEU LEU A . n A 1 104 ILE 104 803 803 ILE ILE A . n A 1 105 VAL 105 804 804 VAL VAL A . n A 1 106 GLU 106 805 805 GLU GLU A . n A 1 107 TYR 107 806 806 TYR TYR A . n A 1 108 ALA 108 807 807 ALA ALA A . n A 1 109 LYS 109 808 808 LYS LYS A . n A 1 110 TYR 110 809 809 TYR TYR A . n A 1 111 GLY 111 810 810 GLY GLY A . n A 1 112 SER 112 811 811 SER SER A . n A 1 113 LEU 113 812 812 LEU LEU A . n A 1 114 ARG 114 813 813 ARG ARG A . n A 1 115 GLY 115 814 814 GLY GLY A . n A 1 116 PHE 116 815 815 PHE PHE A . n A 1 117 LEU 117 816 816 LEU LEU A . n A 1 118 ARG 118 817 817 ARG ARG A . n A 1 119 GLU 119 818 818 GLU GLU A . n A 1 120 SER 120 819 819 SER SER A . n A 1 121 ARG 121 820 820 ARG ARG A . n A 1 122 LYS 122 821 821 LYS LYS A . n A 1 123 VAL 123 822 822 VAL VAL A . n A 1 124 GLY 124 823 ? ? ? A . n A 1 125 PRO 125 824 ? ? ? A . n A 1 126 GLY 126 825 ? ? ? A . n A 1 127 TYR 127 826 ? ? ? A . n A 1 128 LEU 128 827 ? ? ? A . n A 1 129 GLY 129 828 ? ? ? A . n A 1 130 SER 130 829 ? ? ? A . n A 1 131 GLY 131 830 ? ? ? A . n A 1 132 GLY 132 831 ? ? ? A . n A 1 133 SER 133 832 ? ? ? A . n A 1 134 ARG 134 833 ? ? ? A . n A 1 135 ASN 135 834 ? ? ? A . n A 1 136 SER 136 835 ? ? ? A . n A 1 137 SER 137 836 ? ? ? A . n A 1 138 SER 138 837 ? ? ? A . n A 1 139 LEU 139 838 ? ? ? A . n A 1 140 ASP 140 839 ? ? ? A . n A 1 141 HIS 141 840 ? ? ? A . n A 1 142 PRO 142 841 ? ? ? A . n A 1 143 ASP 143 842 ? ? ? A . n A 1 144 GLU 144 843 ? ? ? A . n A 1 145 ARG 145 844 844 ARG ARG A . n A 1 146 ALA 146 845 845 ALA ALA A . n A 1 147 LEU 147 846 846 LEU LEU A . n A 1 148 THR 148 847 847 THR THR A . n A 1 149 MET 149 848 848 MET MET A . n A 1 150 GLY 150 849 849 GLY GLY A . n A 1 151 ASP 151 850 850 ASP ASP A . n A 1 152 LEU 152 851 851 LEU LEU A . n A 1 153 ILE 153 852 852 ILE ILE A . n A 1 154 SER 154 853 853 SER SER A . n A 1 155 PHE 155 854 854 PHE PHE A . n A 1 156 ALA 156 855 855 ALA ALA A . n A 1 157 TRP 157 856 856 TRP TRP A . n A 1 158 GLN 158 857 857 GLN GLN A . n A 1 159 ILE 159 858 858 ILE ILE A . n A 1 160 SER 160 859 859 SER SER A . n A 1 161 GLN 161 860 860 GLN GLN A . n A 1 162 GLY 162 861 861 GLY GLY A . n A 1 163 MET 163 862 862 MET MET A . n A 1 164 GLN 164 863 863 GLN GLN A . n A 1 165 TYR 165 864 864 TYR TYR A . n A 1 166 LEU 166 865 865 LEU LEU A . n A 1 167 ALA 167 866 866 ALA ALA A . n A 1 168 GLU 168 867 867 GLU GLU A . n A 1 169 MET 169 868 868 MET MET A . n A 1 170 LYS 170 869 869 LYS LYS A . n A 1 171 LEU 171 870 870 LEU LEU A . n A 1 172 VAL 172 871 871 VAL VAL A . n A 1 173 HIS 173 872 872 HIS HIS A . n A 1 174 ARG 174 873 873 ARG ARG A . n A 1 175 ASP 175 874 874 ASP ASP A . n A 1 176 LEU 176 875 875 LEU LEU A . n A 1 177 ALA 177 876 876 ALA ALA A . n A 1 178 ALA 178 877 877 ALA ALA A . n A 1 179 ARG 179 878 878 ARG ARG A . n A 1 180 ASN 180 879 879 ASN ASN A . n A 1 181 ILE 181 880 880 ILE ILE A . n A 1 182 LEU 182 881 881 LEU LEU A . n A 1 183 VAL 183 882 882 VAL VAL A . n A 1 184 ALA 184 883 883 ALA ALA A . n A 1 185 GLU 185 884 884 GLU GLU A . n A 1 186 GLY 186 885 885 GLY GLY A . n A 1 187 ARG 187 886 886 ARG ARG A . n A 1 188 LYS 188 887 887 LYS LYS A . n A 1 189 MET 189 888 888 MET MET A . n A 1 190 LYS 190 889 889 LYS LYS A . n A 1 191 ILE 191 890 890 ILE ILE A . n A 1 192 SER 192 891 891 SER SER A . n A 1 193 ASP 193 892 892 ASP ASP A . n A 1 194 PHE 194 893 893 PHE PHE A . n A 1 195 GLY 195 894 894 GLY GLY A . n A 1 196 LEU 196 895 895 LEU LEU A . n A 1 197 SER 197 896 896 SER SER A . n A 1 198 ARG 198 897 897 ARG ARG A . n A 1 199 ASP 199 898 898 ASP ASP A . n A 1 200 VAL 200 899 899 VAL VAL A . n A 1 201 TYR 201 900 900 TYR TYR A . n A 1 202 GLU 202 901 901 GLU GLU A . n A 1 203 GLU 203 902 902 GLU GLU A . n A 1 204 ASP 204 903 903 ASP ASP A . n A 1 205 SER 205 904 904 SER SER A . n A 1 206 PTR 206 905 905 PTR PTR A . n A 1 207 VAL 207 906 906 VAL VAL A . n A 1 208 LYS 208 907 907 LYS LYS A . n A 1 209 ARG 209 908 908 ARG ARG A . n A 1 210 SER 210 909 909 SER SER A . n A 1 211 GLN 211 910 910 GLN GLN A . n A 1 212 GLY 212 911 911 GLY GLY A . n A 1 213 ARG 213 912 912 ARG ARG A . n A 1 214 ILE 214 913 913 ILE ILE A . n A 1 215 PRO 215 914 914 PRO PRO A . n A 1 216 VAL 216 915 915 VAL VAL A . n A 1 217 LYS 217 916 916 LYS LYS A . n A 1 218 TRP 218 917 917 TRP TRP A . n A 1 219 MET 219 918 918 MET MET A . n A 1 220 ALA 220 919 919 ALA ALA A . n A 1 221 ILE 221 920 920 ILE ILE A . n A 1 222 GLU 222 921 921 GLU GLU A . n A 1 223 SER 223 922 922 SER SER A . n A 1 224 LEU 224 923 923 LEU LEU A . n A 1 225 PHE 225 924 924 PHE PHE A . n A 1 226 ASP 226 925 925 ASP ASP A . n A 1 227 HIS 227 926 926 HIS HIS A . n A 1 228 ILE 228 927 927 ILE ILE A . n A 1 229 TYR 229 928 928 TYR TYR A . n A 1 230 THR 230 929 929 THR THR A . n A 1 231 THR 231 930 930 THR THR A . n A 1 232 GLN 232 931 931 GLN GLN A . n A 1 233 SER 233 932 932 SER SER A . n A 1 234 ASP 234 933 933 ASP ASP A . n A 1 235 VAL 235 934 934 VAL VAL A . n A 1 236 TRP 236 935 935 TRP TRP A . n A 1 237 SER 237 936 936 SER SER A . n A 1 238 PHE 238 937 937 PHE PHE A . n A 1 239 GLY 239 938 938 GLY GLY A . n A 1 240 VAL 240 939 939 VAL VAL A . n A 1 241 LEU 241 940 940 LEU LEU A . n A 1 242 LEU 242 941 941 LEU LEU A . n A 1 243 TRP 243 942 942 TRP TRP A . n A 1 244 GLU 244 943 943 GLU GLU A . n A 1 245 ILE 245 944 944 ILE ILE A . n A 1 246 VAL 246 945 945 VAL VAL A . n A 1 247 THR 247 946 946 THR THR A . n A 1 248 LEU 248 947 947 LEU LEU A . n A 1 249 GLY 249 948 948 GLY GLY A . n A 1 250 GLY 250 949 949 GLY GLY A . n A 1 251 ASN 251 950 950 ASN ASN A . n A 1 252 PRO 252 951 951 PRO PRO A . n A 1 253 TYR 253 952 952 TYR TYR A . n A 1 254 PRO 254 953 953 PRO PRO A . n A 1 255 GLY 255 954 954 GLY GLY A . n A 1 256 ILE 256 955 955 ILE ILE A . n A 1 257 PRO 257 956 956 PRO PRO A . n A 1 258 PRO 258 957 957 PRO PRO A . n A 1 259 GLU 259 958 958 GLU GLU A . n A 1 260 ARG 260 959 959 ARG ARG A . n A 1 261 LEU 261 960 960 LEU LEU A . n A 1 262 PHE 262 961 961 PHE PHE A . n A 1 263 ASN 263 962 962 ASN ASN A . n A 1 264 LEU 264 963 963 LEU LEU A . n A 1 265 LEU 265 964 964 LEU LEU A . n A 1 266 LYS 266 965 965 LYS LYS A . n A 1 267 THR 267 966 966 THR THR A . n A 1 268 GLY 268 967 967 GLY GLY A . n A 1 269 HIS 269 968 968 HIS HIS A . n A 1 270 ARG 270 969 969 ARG ARG A . n A 1 271 MET 271 970 970 MET MET A . n A 1 272 GLU 272 971 971 GLU GLU A . n A 1 273 ARG 273 972 972 ARG ARG A . n A 1 274 PRO 274 973 973 PRO PRO A . n A 1 275 ASP 275 974 974 ASP ASP A . n A 1 276 ASN 276 975 975 ASN ASN A . n A 1 277 CYS 277 976 976 CYS CYS A . n A 1 278 SER 278 977 977 SER SER A . n A 1 279 GLU 279 978 978 GLU GLU A . n A 1 280 GLU 280 979 979 GLU GLU A . n A 1 281 MET 281 980 980 MET MET A . n A 1 282 TYR 282 981 981 TYR TYR A . n A 1 283 ARG 283 982 982 ARG ARG A . n A 1 284 LEU 284 983 983 LEU LEU A . n A 1 285 MET 285 984 984 MET MET A . n A 1 286 LEU 286 985 985 LEU LEU A . n A 1 287 GLN 287 986 986 GLN GLN A . n A 1 288 CYS 288 987 987 CYS CYS A . n A 1 289 TRP 289 988 988 TRP TRP A . n A 1 290 LYS 290 989 989 LYS LYS A . n A 1 291 GLN 291 990 990 GLN GLN A . n A 1 292 GLU 292 991 991 GLU GLU A . n A 1 293 PRO 293 992 992 PRO PRO A . n A 1 294 ASP 294 993 993 ASP ASP A . n A 1 295 LYS 295 994 994 LYS LYS A . n A 1 296 ARG 296 995 995 ARG ARG A . n A 1 297 PRO 297 996 996 PRO PRO A . n A 1 298 VAL 298 997 997 VAL VAL A . n A 1 299 PHE 299 998 998 PHE PHE A . n A 1 300 ALA 300 999 999 ALA ALA A . n A 1 301 ASP 301 1000 1000 ASP ASP A . n A 1 302 ILE 302 1001 1001 ILE ILE A . n A 1 303 SER 303 1002 1002 SER SER A . n A 1 304 LYS 304 1003 1003 LYS LYS A . n A 1 305 ASP 305 1004 1004 ASP ASP A . n A 1 306 LEU 306 1005 1005 LEU LEU A . n A 1 307 GLU 307 1006 1006 GLU GLU A . n A 1 308 LYS 308 1007 1007 LYS LYS A . n A 1 309 MET 309 1008 1008 MET MET A . n A 1 310 MET 310 1009 1009 MET MET A . n A 1 311 VAL 311 1010 1010 VAL VAL A . n A 1 312 LYS 312 1011 1011 LYS LYS A . n A 1 313 ARG 313 1012 1012 ARG ARG A . n A 1 314 ARG 314 1013 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 3013 3013 FMT FMT A . C 2 FMT 1 3014 3014 FMT FMT A . D 3 AMP 1 3015 3015 AMP AMP A . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PTR _pdbx_struct_mod_residue.label_seq_id 206 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PTR _pdbx_struct_mod_residue.auth_seq_id 905 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-PHOSPHOTYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,y,-z -1.0000000000 0.0000000000 0.0000000000 144.2620000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-14 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-02-28 5 'Structure model' 1 4 2019-01-30 6 'Structure model' 1 5 2019-05-08 7 'Structure model' 1 6 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Experimental preparation' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Experimental preparation' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' 11 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author 3 5 'Structure model' exptl_crystal_grow 4 6 'Structure model' database_PDB_rev 5 6 'Structure model' database_PDB_rev_record 6 6 'Structure model' exptl_crystal_grow 7 6 'Structure model' struct_conn 8 7 'Structure model' chem_comp_atom 9 7 'Structure model' chem_comp_bond 10 7 'Structure model' database_2 11 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.pdbx_database_id_DOI' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_citation_author.name' 6 5 'Structure model' '_exptl_crystal_grow.method' 7 6 'Structure model' '_exptl_crystal_grow.temp' 8 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 7 'Structure model' '_database_2.pdbx_DOI' 10 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2IVT _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;705-1013 CORRESPOND WITH P07949, 700-704 ARE VECTOR- DERIVED ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 797 ? ? -151.03 46.44 2 1 ARG A 873 ? ? 78.85 -29.33 3 1 ASP A 892 ? ? 61.74 80.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 710 ? CG ? A LYS 11 CG 2 1 Y 1 A LYS 710 ? CD ? A LYS 11 CD 3 1 Y 1 A LYS 710 ? CE ? A LYS 11 CE 4 1 Y 1 A LYS 710 ? NZ ? A LYS 11 NZ 5 1 Y 1 A ILE 711 ? CG1 ? A ILE 12 CG1 6 1 Y 1 A ILE 711 ? CG2 ? A ILE 12 CG2 7 1 Y 1 A ILE 711 ? CD1 ? A ILE 12 CD1 8 1 Y 1 A LYS 716 ? CE ? A LYS 17 CE 9 1 Y 1 A LYS 716 ? NZ ? A LYS 17 NZ 10 1 Y 1 A ARG 721 ? CG ? A ARG 22 CG 11 1 Y 1 A ARG 721 ? CD ? A ARG 22 CD 12 1 Y 1 A ARG 721 ? NE ? A ARG 22 NE 13 1 Y 1 A ARG 721 ? CZ ? A ARG 22 CZ 14 1 Y 1 A ARG 721 ? NH1 ? A ARG 22 NH1 15 1 Y 1 A ARG 721 ? NH2 ? A ARG 22 NH2 16 1 Y 1 A LYS 722 ? CD ? A LYS 23 CD 17 1 Y 1 A LYS 722 ? CE ? A LYS 23 CE 18 1 Y 1 A LYS 722 ? NZ ? A LYS 23 NZ 19 1 Y 1 A GLU 734 ? CG ? A GLU 35 CG 20 1 Y 1 A GLU 734 ? CD ? A GLU 35 CD 21 1 Y 1 A GLU 734 ? OE1 ? A GLU 35 OE1 22 1 Y 1 A GLU 734 ? OE2 ? A GLU 35 OE2 23 1 Y 1 A ARG 749 ? NE ? A ARG 50 NE 24 1 Y 1 A ARG 749 ? CZ ? A ARG 50 CZ 25 1 Y 1 A ARG 749 ? NH1 ? A ARG 50 NH1 26 1 Y 1 A ARG 749 ? NH2 ? A ARG 50 NH2 27 1 Y 1 A GLU 762 ? CD ? A GLU 63 CD 28 1 Y 1 A GLU 762 ? OE1 ? A GLU 63 OE1 29 1 Y 1 A GLU 762 ? OE2 ? A GLU 63 OE2 30 1 Y 1 A GLN 796 ? CG ? A GLN 97 CG 31 1 Y 1 A GLN 796 ? CD ? A GLN 97 CD 32 1 Y 1 A GLN 796 ? OE1 ? A GLN 97 OE1 33 1 Y 1 A GLN 796 ? NE2 ? A GLN 97 NE2 34 1 Y 1 A ASP 797 ? CG ? A ASP 98 CG 35 1 Y 1 A ASP 797 ? OD1 ? A ASP 98 OD1 36 1 Y 1 A ASP 797 ? OD2 ? A ASP 98 OD2 37 1 Y 1 A ARG 820 ? CG ? A ARG 121 CG 38 1 Y 1 A ARG 820 ? CD ? A ARG 121 CD 39 1 Y 1 A ARG 820 ? NE ? A ARG 121 NE 40 1 Y 1 A ARG 820 ? CZ ? A ARG 121 CZ 41 1 Y 1 A ARG 820 ? NH1 ? A ARG 121 NH1 42 1 Y 1 A ARG 820 ? NH2 ? A ARG 121 NH2 43 1 Y 1 A LYS 821 ? CG ? A LYS 122 CG 44 1 Y 1 A LYS 821 ? CD ? A LYS 122 CD 45 1 Y 1 A LYS 821 ? CE ? A LYS 122 CE 46 1 Y 1 A LYS 821 ? NZ ? A LYS 122 NZ 47 1 Y 1 A ARG 844 ? NE ? A ARG 145 NE 48 1 Y 1 A ARG 844 ? CZ ? A ARG 145 CZ 49 1 Y 1 A ARG 844 ? NH1 ? A ARG 145 NH1 50 1 Y 1 A ARG 844 ? NH2 ? A ARG 145 NH2 51 1 Y 1 A GLU 867 ? CD ? A GLU 168 CD 52 1 Y 1 A GLU 867 ? OE1 ? A GLU 168 OE1 53 1 Y 1 A GLU 867 ? OE2 ? A GLU 168 OE2 54 1 Y 1 A LYS 869 ? CD ? A LYS 170 CD 55 1 Y 1 A LYS 869 ? CE ? A LYS 170 CE 56 1 Y 1 A LYS 869 ? NZ ? A LYS 170 NZ 57 1 Y 1 A GLU 884 ? CG ? A GLU 185 CG 58 1 Y 1 A GLU 884 ? CD ? A GLU 185 CD 59 1 Y 1 A GLU 884 ? OE1 ? A GLU 185 OE1 60 1 Y 1 A GLU 884 ? OE2 ? A GLU 185 OE2 61 1 Y 1 A ARG 959 ? CD ? A ARG 260 CD 62 1 Y 1 A ARG 959 ? NE ? A ARG 260 NE 63 1 Y 1 A ARG 959 ? CZ ? A ARG 260 CZ 64 1 Y 1 A ARG 959 ? NH1 ? A ARG 260 NH1 65 1 Y 1 A ARG 959 ? NH2 ? A ARG 260 NH2 66 1 Y 1 A LYS 965 ? CE ? A LYS 266 CE 67 1 Y 1 A LYS 965 ? NZ ? A LYS 266 NZ 68 1 Y 1 A GLU 971 ? CG ? A GLU 272 CG 69 1 Y 1 A GLU 971 ? CD ? A GLU 272 CD 70 1 Y 1 A GLU 971 ? OE1 ? A GLU 272 OE1 71 1 Y 1 A GLU 971 ? OE2 ? A GLU 272 OE2 72 1 Y 1 A GLU 978 ? CG ? A GLU 279 CG 73 1 Y 1 A GLU 978 ? CD ? A GLU 279 CD 74 1 Y 1 A GLU 978 ? OE1 ? A GLU 279 OE1 75 1 Y 1 A GLU 978 ? OE2 ? A GLU 279 OE2 76 1 Y 1 A GLU 979 ? CG ? A GLU 280 CG 77 1 Y 1 A GLU 979 ? CD ? A GLU 280 CD 78 1 Y 1 A GLU 979 ? OE1 ? A GLU 280 OE1 79 1 Y 1 A GLU 979 ? OE2 ? A GLU 280 OE2 80 1 Y 1 A ARG 982 ? NE ? A ARG 283 NE 81 1 Y 1 A ARG 982 ? CZ ? A ARG 283 CZ 82 1 Y 1 A ARG 982 ? NH1 ? A ARG 283 NH1 83 1 Y 1 A ARG 982 ? NH2 ? A ARG 283 NH2 84 1 Y 1 A LYS 989 ? CE ? A LYS 290 CE 85 1 Y 1 A LYS 989 ? NZ ? A LYS 290 NZ 86 1 Y 1 A GLU 991 ? CG ? A GLU 292 CG 87 1 Y 1 A GLU 991 ? CD ? A GLU 292 CD 88 1 Y 1 A GLU 991 ? OE1 ? A GLU 292 OE1 89 1 Y 1 A GLU 991 ? OE2 ? A GLU 292 OE2 90 1 Y 1 A LYS 994 ? CD ? A LYS 295 CD 91 1 Y 1 A LYS 994 ? CE ? A LYS 295 CE 92 1 Y 1 A LYS 994 ? NZ ? A LYS 295 NZ 93 1 Y 1 A LYS 1003 ? CG ? A LYS 304 CG 94 1 Y 1 A LYS 1003 ? CD ? A LYS 304 CD 95 1 Y 1 A LYS 1003 ? CE ? A LYS 304 CE 96 1 Y 1 A LYS 1003 ? NZ ? A LYS 304 NZ 97 1 Y 1 A LYS 1011 ? CG ? A LYS 312 CG 98 1 Y 1 A LYS 1011 ? CD ? A LYS 312 CD 99 1 Y 1 A LYS 1011 ? CE ? A LYS 312 CE 100 1 Y 1 A LYS 1011 ? NZ ? A LYS 312 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 712 ? A LEU 13 2 1 Y 1 A GLU 713 ? A GLU 14 3 1 Y 1 A ASP 714 ? A ASP 15 4 1 Y 1 A GLY 823 ? A GLY 124 5 1 Y 1 A PRO 824 ? A PRO 125 6 1 Y 1 A GLY 825 ? A GLY 126 7 1 Y 1 A TYR 826 ? A TYR 127 8 1 Y 1 A LEU 827 ? A LEU 128 9 1 Y 1 A GLY 828 ? A GLY 129 10 1 Y 1 A SER 829 ? A SER 130 11 1 Y 1 A GLY 830 ? A GLY 131 12 1 Y 1 A GLY 831 ? A GLY 132 13 1 Y 1 A SER 832 ? A SER 133 14 1 Y 1 A ARG 833 ? A ARG 134 15 1 Y 1 A ASN 834 ? A ASN 135 16 1 Y 1 A SER 835 ? A SER 136 17 1 Y 1 A SER 836 ? A SER 137 18 1 Y 1 A SER 837 ? A SER 138 19 1 Y 1 A LEU 838 ? A LEU 139 20 1 Y 1 A ASP 839 ? A ASP 140 21 1 Y 1 A HIS 840 ? A HIS 141 22 1 Y 1 A PRO 841 ? A PRO 142 23 1 Y 1 A ASP 842 ? A ASP 143 24 1 Y 1 A GLU 843 ? A GLU 144 25 1 Y 1 A ARG 1013 ? A ARG 314 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMP P P N N 14 AMP O1P O N N 15 AMP O2P O N N 16 AMP O3P O N N 17 AMP "O5'" O N N 18 AMP "C5'" C N N 19 AMP "C4'" C N R 20 AMP "O4'" O N N 21 AMP "C3'" C N S 22 AMP "O3'" O N N 23 AMP "C2'" C N R 24 AMP "O2'" O N N 25 AMP "C1'" C N R 26 AMP N9 N Y N 27 AMP C8 C Y N 28 AMP N7 N Y N 29 AMP C5 C Y N 30 AMP C6 C Y N 31 AMP N6 N N N 32 AMP N1 N Y N 33 AMP C2 C Y N 34 AMP N3 N Y N 35 AMP C4 C Y N 36 AMP HOP2 H N N 37 AMP HOP3 H N N 38 AMP "H5'1" H N N 39 AMP "H5'2" H N N 40 AMP "H4'" H N N 41 AMP "H3'" H N N 42 AMP "HO3'" H N N 43 AMP "H2'" H N N 44 AMP "HO2'" H N N 45 AMP "H1'" H N N 46 AMP H8 H N N 47 AMP HN61 H N N 48 AMP HN62 H N N 49 AMP H2 H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 FMT C C N N 125 FMT O1 O N N 126 FMT O2 O N N 127 FMT H H N N 128 FMT HO2 H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIS N N N N 179 HIS CA C N S 180 HIS C C N N 181 HIS O O N N 182 HIS CB C N N 183 HIS CG C Y N 184 HIS ND1 N Y N 185 HIS CD2 C Y N 186 HIS CE1 C Y N 187 HIS NE2 N Y N 188 HIS OXT O N N 189 HIS H H N N 190 HIS H2 H N N 191 HIS HA H N N 192 HIS HB2 H N N 193 HIS HB3 H N N 194 HIS HD1 H N N 195 HIS HD2 H N N 196 HIS HE1 H N N 197 HIS HE2 H N N 198 HIS HXT H N N 199 HOH O O N N 200 HOH H1 H N N 201 HOH H2 H N N 202 ILE N N N N 203 ILE CA C N S 204 ILE C C N N 205 ILE O O N N 206 ILE CB C N S 207 ILE CG1 C N N 208 ILE CG2 C N N 209 ILE CD1 C N N 210 ILE OXT O N N 211 ILE H H N N 212 ILE H2 H N N 213 ILE HA H N N 214 ILE HB H N N 215 ILE HG12 H N N 216 ILE HG13 H N N 217 ILE HG21 H N N 218 ILE HG22 H N N 219 ILE HG23 H N N 220 ILE HD11 H N N 221 ILE HD12 H N N 222 ILE HD13 H N N 223 ILE HXT H N N 224 LEU N N N N 225 LEU CA C N S 226 LEU C C N N 227 LEU O O N N 228 LEU CB C N N 229 LEU CG C N N 230 LEU CD1 C N N 231 LEU CD2 C N N 232 LEU OXT O N N 233 LEU H H N N 234 LEU H2 H N N 235 LEU HA H N N 236 LEU HB2 H N N 237 LEU HB3 H N N 238 LEU HG H N N 239 LEU HD11 H N N 240 LEU HD12 H N N 241 LEU HD13 H N N 242 LEU HD21 H N N 243 LEU HD22 H N N 244 LEU HD23 H N N 245 LEU HXT H N N 246 LYS N N N N 247 LYS CA C N S 248 LYS C C N N 249 LYS O O N N 250 LYS CB C N N 251 LYS CG C N N 252 LYS CD C N N 253 LYS CE C N N 254 LYS NZ N N N 255 LYS OXT O N N 256 LYS H H N N 257 LYS H2 H N N 258 LYS HA H N N 259 LYS HB2 H N N 260 LYS HB3 H N N 261 LYS HG2 H N N 262 LYS HG3 H N N 263 LYS HD2 H N N 264 LYS HD3 H N N 265 LYS HE2 H N N 266 LYS HE3 H N N 267 LYS HZ1 H N N 268 LYS HZ2 H N N 269 LYS HZ3 H N N 270 LYS HXT H N N 271 MET N N N N 272 MET CA C N S 273 MET C C N N 274 MET O O N N 275 MET CB C N N 276 MET CG C N N 277 MET SD S N N 278 MET CE C N N 279 MET OXT O N N 280 MET H H N N 281 MET H2 H N N 282 MET HA H N N 283 MET HB2 H N N 284 MET HB3 H N N 285 MET HG2 H N N 286 MET HG3 H N N 287 MET HE1 H N N 288 MET HE2 H N N 289 MET HE3 H N N 290 MET HXT H N N 291 PHE N N N N 292 PHE CA C N S 293 PHE C C N N 294 PHE O O N N 295 PHE CB C N N 296 PHE CG C Y N 297 PHE CD1 C Y N 298 PHE CD2 C Y N 299 PHE CE1 C Y N 300 PHE CE2 C Y N 301 PHE CZ C Y N 302 PHE OXT O N N 303 PHE H H N N 304 PHE H2 H N N 305 PHE HA H N N 306 PHE HB2 H N N 307 PHE HB3 H N N 308 PHE HD1 H N N 309 PHE HD2 H N N 310 PHE HE1 H N N 311 PHE HE2 H N N 312 PHE HZ H N N 313 PHE HXT H N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 PTR N N N N 332 PTR CA C N S 333 PTR C C N N 334 PTR O O N N 335 PTR OXT O N N 336 PTR CB C N N 337 PTR CG C Y N 338 PTR CD1 C Y N 339 PTR CD2 C Y N 340 PTR CE1 C Y N 341 PTR CE2 C Y N 342 PTR CZ C Y N 343 PTR OH O N N 344 PTR P P N N 345 PTR O1P O N N 346 PTR O2P O N N 347 PTR O3P O N N 348 PTR H H N N 349 PTR H2 H N N 350 PTR HA H N N 351 PTR HXT H N N 352 PTR HB2 H N N 353 PTR HB3 H N N 354 PTR HD1 H N N 355 PTR HD2 H N N 356 PTR HE1 H N N 357 PTR HE2 H N N 358 PTR HO2P H N N 359 PTR HO3P H N N 360 SER N N N N 361 SER CA C N S 362 SER C C N N 363 SER O O N N 364 SER CB C N N 365 SER OG O N N 366 SER OXT O N N 367 SER H H N N 368 SER H2 H N N 369 SER HA H N N 370 SER HB2 H N N 371 SER HB3 H N N 372 SER HG H N N 373 SER HXT H N N 374 THR N N N N 375 THR CA C N S 376 THR C C N N 377 THR O O N N 378 THR CB C N R 379 THR OG1 O N N 380 THR CG2 C N N 381 THR OXT O N N 382 THR H H N N 383 THR H2 H N N 384 THR HA H N N 385 THR HB H N N 386 THR HG1 H N N 387 THR HG21 H N N 388 THR HG22 H N N 389 THR HG23 H N N 390 THR HXT H N N 391 TRP N N N N 392 TRP CA C N S 393 TRP C C N N 394 TRP O O N N 395 TRP CB C N N 396 TRP CG C Y N 397 TRP CD1 C Y N 398 TRP CD2 C Y N 399 TRP NE1 N Y N 400 TRP CE2 C Y N 401 TRP CE3 C Y N 402 TRP CZ2 C Y N 403 TRP CZ3 C Y N 404 TRP CH2 C Y N 405 TRP OXT O N N 406 TRP H H N N 407 TRP H2 H N N 408 TRP HA H N N 409 TRP HB2 H N N 410 TRP HB3 H N N 411 TRP HD1 H N N 412 TRP HE1 H N N 413 TRP HE3 H N N 414 TRP HZ2 H N N 415 TRP HZ3 H N N 416 TRP HH2 H N N 417 TRP HXT H N N 418 TYR N N N N 419 TYR CA C N S 420 TYR C C N N 421 TYR O O N N 422 TYR CB C N N 423 TYR CG C Y N 424 TYR CD1 C Y N 425 TYR CD2 C Y N 426 TYR CE1 C Y N 427 TYR CE2 C Y N 428 TYR CZ C Y N 429 TYR OH O N N 430 TYR OXT O N N 431 TYR H H N N 432 TYR H2 H N N 433 TYR HA H N N 434 TYR HB2 H N N 435 TYR HB3 H N N 436 TYR HD1 H N N 437 TYR HD2 H N N 438 TYR HE1 H N N 439 TYR HE2 H N N 440 TYR HH H N N 441 TYR HXT H N N 442 VAL N N N N 443 VAL CA C N S 444 VAL C C N N 445 VAL O O N N 446 VAL CB C N N 447 VAL CG1 C N N 448 VAL CG2 C N N 449 VAL OXT O N N 450 VAL H H N N 451 VAL H2 H N N 452 VAL HA H N N 453 VAL HB H N N 454 VAL HG11 H N N 455 VAL HG12 H N N 456 VAL HG13 H N N 457 VAL HG21 H N N 458 VAL HG22 H N N 459 VAL HG23 H N N 460 VAL HXT H N N 461 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMP P O1P doub N N 13 AMP P O2P sing N N 14 AMP P O3P sing N N 15 AMP P "O5'" sing N N 16 AMP O2P HOP2 sing N N 17 AMP O3P HOP3 sing N N 18 AMP "O5'" "C5'" sing N N 19 AMP "C5'" "C4'" sing N N 20 AMP "C5'" "H5'1" sing N N 21 AMP "C5'" "H5'2" sing N N 22 AMP "C4'" "O4'" sing N N 23 AMP "C4'" "C3'" sing N N 24 AMP "C4'" "H4'" sing N N 25 AMP "O4'" "C1'" sing N N 26 AMP "C3'" "O3'" sing N N 27 AMP "C3'" "C2'" sing N N 28 AMP "C3'" "H3'" sing N N 29 AMP "O3'" "HO3'" sing N N 30 AMP "C2'" "O2'" sing N N 31 AMP "C2'" "C1'" sing N N 32 AMP "C2'" "H2'" sing N N 33 AMP "O2'" "HO2'" sing N N 34 AMP "C1'" N9 sing N N 35 AMP "C1'" "H1'" sing N N 36 AMP N9 C8 sing Y N 37 AMP N9 C4 sing Y N 38 AMP C8 N7 doub Y N 39 AMP C8 H8 sing N N 40 AMP N7 C5 sing Y N 41 AMP C5 C6 sing Y N 42 AMP C5 C4 doub Y N 43 AMP C6 N6 sing N N 44 AMP C6 N1 doub Y N 45 AMP N6 HN61 sing N N 46 AMP N6 HN62 sing N N 47 AMP N1 C2 sing Y N 48 AMP C2 N3 doub Y N 49 AMP C2 H2 sing N N 50 AMP N3 C4 sing Y N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 FMT C O1 doub N N 122 FMT C O2 sing N N 123 FMT C H sing N N 124 FMT O2 HO2 sing N N 125 GLN N CA sing N N 126 GLN N H sing N N 127 GLN N H2 sing N N 128 GLN CA C sing N N 129 GLN CA CB sing N N 130 GLN CA HA sing N N 131 GLN C O doub N N 132 GLN C OXT sing N N 133 GLN CB CG sing N N 134 GLN CB HB2 sing N N 135 GLN CB HB3 sing N N 136 GLN CG CD sing N N 137 GLN CG HG2 sing N N 138 GLN CG HG3 sing N N 139 GLN CD OE1 doub N N 140 GLN CD NE2 sing N N 141 GLN NE2 HE21 sing N N 142 GLN NE2 HE22 sing N N 143 GLN OXT HXT sing N N 144 GLU N CA sing N N 145 GLU N H sing N N 146 GLU N H2 sing N N 147 GLU CA C sing N N 148 GLU CA CB sing N N 149 GLU CA HA sing N N 150 GLU C O doub N N 151 GLU C OXT sing N N 152 GLU CB CG sing N N 153 GLU CB HB2 sing N N 154 GLU CB HB3 sing N N 155 GLU CG CD sing N N 156 GLU CG HG2 sing N N 157 GLU CG HG3 sing N N 158 GLU CD OE1 doub N N 159 GLU CD OE2 sing N N 160 GLU OE2 HE2 sing N N 161 GLU OXT HXT sing N N 162 GLY N CA sing N N 163 GLY N H sing N N 164 GLY N H2 sing N N 165 GLY CA C sing N N 166 GLY CA HA2 sing N N 167 GLY CA HA3 sing N N 168 GLY C O doub N N 169 GLY C OXT sing N N 170 GLY OXT HXT sing N N 171 HIS N CA sing N N 172 HIS N H sing N N 173 HIS N H2 sing N N 174 HIS CA C sing N N 175 HIS CA CB sing N N 176 HIS CA HA sing N N 177 HIS C O doub N N 178 HIS C OXT sing N N 179 HIS CB CG sing N N 180 HIS CB HB2 sing N N 181 HIS CB HB3 sing N N 182 HIS CG ND1 sing Y N 183 HIS CG CD2 doub Y N 184 HIS ND1 CE1 doub Y N 185 HIS ND1 HD1 sing N N 186 HIS CD2 NE2 sing Y N 187 HIS CD2 HD2 sing N N 188 HIS CE1 NE2 sing Y N 189 HIS CE1 HE1 sing N N 190 HIS NE2 HE2 sing N N 191 HIS OXT HXT sing N N 192 HOH O H1 sing N N 193 HOH O H2 sing N N 194 ILE N CA sing N N 195 ILE N H sing N N 196 ILE N H2 sing N N 197 ILE CA C sing N N 198 ILE CA CB sing N N 199 ILE CA HA sing N N 200 ILE C O doub N N 201 ILE C OXT sing N N 202 ILE CB CG1 sing N N 203 ILE CB CG2 sing N N 204 ILE CB HB sing N N 205 ILE CG1 CD1 sing N N 206 ILE CG1 HG12 sing N N 207 ILE CG1 HG13 sing N N 208 ILE CG2 HG21 sing N N 209 ILE CG2 HG22 sing N N 210 ILE CG2 HG23 sing N N 211 ILE CD1 HD11 sing N N 212 ILE CD1 HD12 sing N N 213 ILE CD1 HD13 sing N N 214 ILE OXT HXT sing N N 215 LEU N CA sing N N 216 LEU N H sing N N 217 LEU N H2 sing N N 218 LEU CA C sing N N 219 LEU CA CB sing N N 220 LEU CA HA sing N N 221 LEU C O doub N N 222 LEU C OXT sing N N 223 LEU CB CG sing N N 224 LEU CB HB2 sing N N 225 LEU CB HB3 sing N N 226 LEU CG CD1 sing N N 227 LEU CG CD2 sing N N 228 LEU CG HG sing N N 229 LEU CD1 HD11 sing N N 230 LEU CD1 HD12 sing N N 231 LEU CD1 HD13 sing N N 232 LEU CD2 HD21 sing N N 233 LEU CD2 HD22 sing N N 234 LEU CD2 HD23 sing N N 235 LEU OXT HXT sing N N 236 LYS N CA sing N N 237 LYS N H sing N N 238 LYS N H2 sing N N 239 LYS CA C sing N N 240 LYS CA CB sing N N 241 LYS CA HA sing N N 242 LYS C O doub N N 243 LYS C OXT sing N N 244 LYS CB CG sing N N 245 LYS CB HB2 sing N N 246 LYS CB HB3 sing N N 247 LYS CG CD sing N N 248 LYS CG HG2 sing N N 249 LYS CG HG3 sing N N 250 LYS CD CE sing N N 251 LYS CD HD2 sing N N 252 LYS CD HD3 sing N N 253 LYS CE NZ sing N N 254 LYS CE HE2 sing N N 255 LYS CE HE3 sing N N 256 LYS NZ HZ1 sing N N 257 LYS NZ HZ2 sing N N 258 LYS NZ HZ3 sing N N 259 LYS OXT HXT sing N N 260 MET N CA sing N N 261 MET N H sing N N 262 MET N H2 sing N N 263 MET CA C sing N N 264 MET CA CB sing N N 265 MET CA HA sing N N 266 MET C O doub N N 267 MET C OXT sing N N 268 MET CB CG sing N N 269 MET CB HB2 sing N N 270 MET CB HB3 sing N N 271 MET CG SD sing N N 272 MET CG HG2 sing N N 273 MET CG HG3 sing N N 274 MET SD CE sing N N 275 MET CE HE1 sing N N 276 MET CE HE2 sing N N 277 MET CE HE3 sing N N 278 MET OXT HXT sing N N 279 PHE N CA sing N N 280 PHE N H sing N N 281 PHE N H2 sing N N 282 PHE CA C sing N N 283 PHE CA CB sing N N 284 PHE CA HA sing N N 285 PHE C O doub N N 286 PHE C OXT sing N N 287 PHE CB CG sing N N 288 PHE CB HB2 sing N N 289 PHE CB HB3 sing N N 290 PHE CG CD1 doub Y N 291 PHE CG CD2 sing Y N 292 PHE CD1 CE1 sing Y N 293 PHE CD1 HD1 sing N N 294 PHE CD2 CE2 doub Y N 295 PHE CD2 HD2 sing N N 296 PHE CE1 CZ doub Y N 297 PHE CE1 HE1 sing N N 298 PHE CE2 CZ sing Y N 299 PHE CE2 HE2 sing N N 300 PHE CZ HZ sing N N 301 PHE OXT HXT sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 PTR N CA sing N N 320 PTR N H sing N N 321 PTR N H2 sing N N 322 PTR CA C sing N N 323 PTR CA CB sing N N 324 PTR CA HA sing N N 325 PTR C O doub N N 326 PTR C OXT sing N N 327 PTR OXT HXT sing N N 328 PTR CB CG sing N N 329 PTR CB HB2 sing N N 330 PTR CB HB3 sing N N 331 PTR CG CD1 doub Y N 332 PTR CG CD2 sing Y N 333 PTR CD1 CE1 sing Y N 334 PTR CD1 HD1 sing N N 335 PTR CD2 CE2 doub Y N 336 PTR CD2 HD2 sing N N 337 PTR CE1 CZ doub Y N 338 PTR CE1 HE1 sing N N 339 PTR CE2 CZ sing Y N 340 PTR CE2 HE2 sing N N 341 PTR CZ OH sing N N 342 PTR OH P sing N N 343 PTR P O1P doub N N 344 PTR P O2P sing N N 345 PTR P O3P sing N N 346 PTR O2P HO2P sing N N 347 PTR O3P HO3P sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 'ADENOSINE MONOPHOSPHATE' AMP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GJO _pdbx_initial_refinement_model.details 'PDB ENTRY 1GJO' #