HEADER CHAPERONE 12-JUL-06 2IY2 TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DIMER DOMAIN OF E.COLI DSBG COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL DISULFIDE INTERCHANGE PROTEIN DSBG; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DSBG; COMPND 5 OTHER_DETAILS: FOUR CADMIUM INOS COORDINATE WITH WATER MOLECULES AND COMPND 6 SIDE CHAINS OF ASP46 OR HIS49 ON BOTH CHAINS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS DSBC, DSBG, CHAPERONE, PERIPLASMIC, REDOX-ACTIVE CENTER, DISULFIDE KEYWDS 2 BOND ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.-M.YEH,P.METCALF REVDAT 4 13-DEC-23 2IY2 1 LINK REVDAT 3 13-JUL-11 2IY2 1 VERSN REVDAT 2 24-FEB-09 2IY2 1 VERSN REVDAT 1 17-JUL-07 2IY2 0 JRNL AUTH S.-M.YEH,N.KOON,C.SQUIRE,P.METCALF JRNL TITL STRUCTURES OF THE DIMERIZATION DOMAINS OF THE ESCHERICHIA JRNL TITL 2 COLI DISULFIDE-BOND ISOMERASE ENZYMES DSBC AND DSBG JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 63 465 2007 JRNL REFN ISSN 0907-4449 JRNL PMID 17372350 JRNL DOI 10.1107/S0907444907003320 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 10136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 512 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 736 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1009 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 58 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.162 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1028 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1387 ; 1.441 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 133 ; 5.120 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 33 ;30.138 ;25.758 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 177 ;16.153 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 156 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 746 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 410 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 716 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 52 ; 0.178 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.259 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.099 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 686 ; 0.838 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1065 ; 1.243 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 395 ; 2.228 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 322 ; 3.104 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6880 13.4910 4.0110 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: 0.0049 REMARK 3 T33: 0.0153 T12: 0.0162 REMARK 3 T13: -0.0578 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 2.7653 L22: 4.0484 REMARK 3 L33: 4.7077 L12: 0.4030 REMARK 3 L13: -0.9750 L23: -0.8130 REMARK 3 S TENSOR REMARK 3 S11: 0.0260 S12: -0.1812 S13: -0.1860 REMARK 3 S21: 0.3782 S22: -0.0325 S23: -0.2530 REMARK 3 S31: 0.0235 S32: 0.3149 S33: 0.0065 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 71 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8980 9.9550 -10.7110 REMARK 3 T TENSOR REMARK 3 T11: -0.0212 T22: 0.0012 REMARK 3 T33: -0.0215 T12: 0.0061 REMARK 3 T13: -0.0117 T23: -0.0714 REMARK 3 L TENSOR REMARK 3 L11: 3.8798 L22: 4.3569 REMARK 3 L33: 6.1189 L12: 0.0617 REMARK 3 L13: -0.5524 L23: 0.4786 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: 0.3385 S13: -0.3197 REMARK 3 S21: -0.3539 S22: 0.1149 S23: -0.2167 REMARK 3 S31: 0.1998 S32: 0.2832 S33: -0.1090 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2IY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1290029354. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 120.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10806 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 34.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 1V58 REMARK 200 REMARK 200 REMARK: DIFFRACTION QUALITY WAS IMPROVED USING THE FLASH- REMARK 200 ANNEALING METHOD. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CADMIUM CHLORIDE, 33% MPD, PH REMARK 280 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.02450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 10.51225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.53675 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ILE A 72 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLN B 35 REMARK 465 ASP B 36 REMARK 465 ILE B 72 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CD CE NZ REMARK 470 MET A 37 CG SD CE REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 GLU A 69 CD OE1 OE2 REMARK 470 LYS B 12 CD CE NZ REMARK 470 LYS B 33 CG CD CE NZ REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 LYS B 59 CE NZ REMARK 470 GLU B 61 CD OE1 OE2 REMARK 470 GLU B 71 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 57 -168.67 -104.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2001 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A2003 DISTANCE = 5.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1073 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 22 OD2 REMARK 620 2 ASP A 22 OD1 54.2 REMARK 620 3 ASP A 46 OD1 140.5 87.4 REMARK 620 4 HOH A2015 O 93.7 90.6 95.6 REMARK 620 5 HOH A2017 O 104.6 155.4 109.9 104.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A1072 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 49 NE2 REMARK 620 2 HOH A2014 O 106.9 REMARK 620 3 HOH A2023 O 95.8 122.9 REMARK 620 4 HOH A2024 O 97.1 112.8 115.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1072 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2026 O REMARK 620 2 HIS B 49 NE2 92.8 REMARK 620 3 HOH B2009 O 125.0 107.1 REMARK 620 4 HOH B2022 O 115.0 97.0 112.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B1073 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 22 OD1 REMARK 620 2 ASP B 22 OD2 53.4 REMARK 620 3 ASP B 46 OD2 141.7 88.5 REMARK 620 4 HOH B2008 O 82.5 77.7 85.7 REMARK 620 5 HOH B2014 O 104.9 152.4 109.7 83.0 REMARK 620 6 HOH B2020 O 92.0 93.3 94.4 171.0 105.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A1072 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A1073 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B1072 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B1073 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1V57 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE DISULFIDE BOND ISOMERASE DSBG REMARK 900 RELATED ID: 1V58 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE REDUCED PROTEIN DISULFIDE BONDISOMERASE REMARK 900 DSBG DBREF 2IY2 A 1 1 PDB 2IY2 2IY2 1 1 DBREF 2IY2 A 2 72 UNP P77202 DSBG_ECOLI 19 89 DBREF 2IY2 A 1 1 PDB 2IY2 2IY2 1 1 DBREF 2IY2 B 2 72 UNP P77202 DSBG_ECOLI 19 89 SEQRES 1 A 72 MET GLU LEU PRO ALA PRO VAL LYS ALA ILE GLU LYS GLN SEQRES 2 A 72 GLY ILE THR ILE ILE LYS THR PHE ASP ALA PRO GLY GLY SEQRES 3 A 72 MET LYS GLY TYR LEU GLY LYS TYR GLN ASP MET GLY VAL SEQRES 4 A 72 THR ILE TYR LEU THR PRO ASP GLY LYS HIS ALA ILE SER SEQRES 5 A 72 GLY TYR MET TYR ASN GLU LYS GLY GLU ASN LEU SER ASN SEQRES 6 A 72 THR LEU ILE GLU LYS GLU ILE SEQRES 1 B 72 MET GLU LEU PRO ALA PRO VAL LYS ALA ILE GLU LYS GLN SEQRES 2 B 72 GLY ILE THR ILE ILE LYS THR PHE ASP ALA PRO GLY GLY SEQRES 3 B 72 MET LYS GLY TYR LEU GLY LYS TYR GLN ASP MET GLY VAL SEQRES 4 B 72 THR ILE TYR LEU THR PRO ASP GLY LYS HIS ALA ILE SER SEQRES 5 B 72 GLY TYR MET TYR ASN GLU LYS GLY GLU ASN LEU SER ASN SEQRES 6 B 72 THR LEU ILE GLU LYS GLU ILE HET CD A1072 1 HET CD A1073 1 HET CD B1072 1 HET CD B1073 1 HETNAM CD CADMIUM ION FORMUL 3 CD 4(CD 2+) FORMUL 7 HOH *58(H2 O) HELIX 1 1 PRO A 4 LYS A 12 1 9 HELIX 2 2 ASN A 62 GLU A 71 1 10 HELIX 3 3 PRO B 4 LYS B 12 1 9 HELIX 4 4 PRO B 24 GLY B 26 5 3 HELIX 5 5 ASN B 62 GLU B 71 1 10 SHEET 1 AA 8 THR A 16 ASP A 22 0 SHEET 2 AA 8 LYS A 28 TYR A 34 -1 O GLY A 29 N PHE A 21 SHEET 3 AA 8 MET A 37 LEU A 43 -1 O MET A 37 N TYR A 34 SHEET 4 AA 8 ALA A 50 TYR A 56 -1 O ILE A 51 N TYR A 42 SHEET 5 AA 8 ALA B 50 TYR B 56 -1 O ALA B 50 N TYR A 56 SHEET 6 AA 8 GLY B 38 LEU B 43 -1 O THR B 40 N GLY B 53 SHEET 7 AA 8 LYS B 28 LYS B 33 -1 O LYS B 28 N LEU B 43 SHEET 8 AA 8 THR B 16 ASP B 22 -1 O THR B 16 N LYS B 33 LINK OD2 ASP A 22 CD CD A1073 4454 1555 2.43 LINK OD1 ASP A 22 CD CD A1073 4454 1555 2.33 LINK OD1 ASP A 46 CD CD A1073 1555 1555 2.27 LINK NE2 HIS A 49 CD CD A1072 1555 1555 2.35 LINK CD CD A1072 O HOH A2014 1555 4454 2.33 LINK CD CD A1072 O HOH A2023 1555 1555 2.30 LINK CD CD A1072 O HOH A2024 1555 1555 2.08 LINK CD CD A1073 O HOH A2015 1555 4454 2.26 LINK CD CD A1073 O HOH A2017 1555 4454 2.54 LINK O HOH A2026 CD CD B1072 1555 1555 2.34 LINK OD1 ASP B 22 CD CD B1073 3565 1555 2.50 LINK OD2 ASP B 22 CD CD B1073 3565 1555 2.32 LINK OD2 ASP B 46 CD CD B1073 1555 1555 2.28 LINK NE2 HIS B 49 CD CD B1072 1555 1555 2.34 LINK CD CD B1072 O HOH B2009 1555 3565 2.36 LINK CD CD B1072 O HOH B2022 1555 1555 2.27 LINK CD CD B1073 O HOH B2008 1555 3565 2.29 LINK CD CD B1073 O HOH B2014 1555 3565 2.50 LINK CD CD B1073 O HOH B2020 1555 1555 2.41 SITE 1 AC1 4 HIS A 49 HOH A2014 HOH A2023 HOH A2024 SITE 1 AC2 4 ASP A 22 ASP A 46 HOH A2015 HOH A2017 SITE 1 AC3 4 HOH A2026 HIS B 49 HOH B2009 HOH B2022 SITE 1 AC4 5 ASP B 22 ASP B 46 HOH B2008 HOH B2014 SITE 2 AC4 5 HOH B2020 CRYST1 56.842 56.842 42.049 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017593 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017593 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023782 0.00000