HEADER TOXIN 25-JUL-06 2IZP TITLE BIPD - AN INVASION PROTEIN ASSOCIATED WITH THE TYPE-III SECRETION TITLE 2 SYSTEM OF BURKHOLDERIA PSEUDOMALLEI. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MEMBRANE ANTIGEN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 8-310; COMPND 5 SYNONYM: BIPD; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS VIRULENCE FACTOR, INVASION PROTEIN, TOXIN, TYPE-III SECRETION SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.T.ERSKINE,M.J.KNIGHT,A.RUAUX,H.MIKOLAJEK,N.WONG-FAT-SANG,J.WITHERS, AUTHOR 2 R.GILL,S.P.WOOD,M.WOOD,G.C.FOX,J.B.COOPER REVDAT 5 08-MAY-24 2IZP 1 REMARK REVDAT 4 14-AUG-19 2IZP 1 TITLE REVDAT 3 24-FEB-09 2IZP 1 VERSN REVDAT 2 27-SEP-06 2IZP 1 JRNL SEQADV REVDAT 1 06-SEP-06 2IZP 0 JRNL AUTH P.T.ERSKINE,M.J.KNIGHT,A.RUAUX,H.MIKOLAJEK,N.WONG-FAT-SANG, JRNL AUTH 2 J.WITHERS,R.GILL,S.P.WOOD,M.WOOD,G.C.FOX,J.B.COOPER JRNL TITL HIGH RESOLUTION STRUCTURE OF BIPD: AN INVASION PROTEIN JRNL TITL 2 ASSOCIATED WITH THE TYPE III SECRETION SYSTEM OF JRNL TITL 3 BURKHOLDERIA PSEUDOMALLEI. JRNL REF J.MOL.BIOL. V. 363 125 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16950399 JRNL DOI 10.1016/J.JMB.2006.07.069 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.226 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.299 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1394 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 28267 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.212 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 1208 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 24277 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4164 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 681 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 19327 REMARK 3 NUMBER OF RESTRAINTS : 17256 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 ANGLE DISTANCES (A) : 0.017 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.022 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.022 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.024 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.014 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1290029496. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.80 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104464 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: [BIPD]=4 MG/ML, 20-25% PEG 4000, 5MM REMARK 280 NICKEL CHLORIDE, 0.1M GLYCINE, 0.1M SODIUM CACODYLATE PH 5.0- REMARK 280 5.5., PH 5.80 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.10200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1008 REMARK 465 SER A 1009 REMARK 465 ALA A 1010 REMARK 465 LEU A 1011 REMARK 465 THR A 1012 REMARK 465 VAL A 1013 REMARK 465 ARG A 1014 REMARK 465 ASP A 1015 REMARK 465 TRP A 1016 REMARK 465 PRO A 1017 REMARK 465 ALA A 1018 REMARK 465 LEU A 1019 REMARK 465 GLU A 1020 REMARK 465 ALA A 1021 REMARK 465 LEU A 1022 REMARK 465 ALA A 1023 REMARK 465 LYS A 1024 REMARK 465 THR A 1025 REMARK 465 MET A 1026 REMARK 465 PRO A 1027 REMARK 465 ALA A 1028 REMARK 465 ASP A 1029 REMARK 465 ASP A 1302 REMARK 465 THR A 1303 REMARK 465 ALA A 1304 REMARK 465 LYS A 1305 REMARK 465 SER A 1306 REMARK 465 TYR A 1307 REMARK 465 LEU A 1308 REMARK 465 GLN A 1309 REMARK 465 ILE A 1310 REMARK 465 GLY B 2008 REMARK 465 SER B 2009 REMARK 465 ALA B 2010 REMARK 465 LEU B 2011 REMARK 465 THR B 2012 REMARK 465 VAL B 2013 REMARK 465 ARG B 2014 REMARK 465 ASP B 2015 REMARK 465 TRP B 2016 REMARK 465 PRO B 2017 REMARK 465 ALA B 2018 REMARK 465 LEU B 2019 REMARK 465 GLU B 2020 REMARK 465 ALA B 2021 REMARK 465 LEU B 2022 REMARK 465 ALA B 2023 REMARK 465 LYS B 2024 REMARK 465 THR B 2025 REMARK 465 MET B 2026 REMARK 465 PRO B 2027 REMARK 465 ALA B 2028 REMARK 465 ASP B 2029 REMARK 465 ALA B 2030 REMARK 465 GLY B 2031 REMARK 465 ALA B 2032 REMARK 465 ARG B 2033 REMARK 465 ALA B 2034 REMARK 465 MET B 2035 REMARK 465 THR B 2036 REMARK 465 SER B 2306 REMARK 465 TYR B 2307 REMARK 465 LEU B 2308 REMARK 465 GLN B 2309 REMARK 465 ILE B 2310 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B2126 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A1032 83.26 -66.86 REMARK 500 ALA A1034 42.16 -165.04 REMARK 500 LEU A1040 -73.95 -64.15 REMARK 500 ASP A1116 -83.87 -130.57 REMARK 500 THR A1117 -76.42 -148.74 REMARK 500 GLU A1121 110.54 20.62 REMARK 500 GLN A1125 74.84 -116.76 REMARK 500 PRO A1126 173.94 -59.60 REMARK 500 ASP A1127 -52.77 136.20 REMARK 500 LYS A1175 -84.02 -104.96 REMARK 500 ASP A1177 40.60 -88.93 REMARK 500 LYS A1178 -2.01 -171.04 REMARK 500 PRO A1204 153.46 -47.96 REMARK 500 SER A1223 -144.50 -60.21 REMARK 500 ASP B2039 -104.82 -118.43 REMARK 500 ALA B2042 57.98 -146.38 REMARK 500 ALA B2043 13.72 169.61 REMARK 500 ASP B2068 -142.61 -140.02 REMARK 500 ARG B2069 112.43 -172.43 REMARK 500 ASP B2076 159.40 -36.27 REMARK 500 ALA B2118 43.58 -95.74 REMARK 500 GLU B2121 -169.17 51.26 REMARK 500 PRO B2126 65.26 -6.54 REMARK 500 LYS B2175 -67.19 -95.10 REMARK 500 ASP B2177 -77.42 -33.57 REMARK 500 ASP B2183 70.67 -103.98 REMARK 500 PRO B2204 173.86 -57.27 REMARK 500 LYS B2205 -71.82 -50.82 REMARK 500 SER B2223 -157.24 -78.88 REMARK 500 ASP B2302 65.08 -115.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2001 DISTANCE = 7.76 ANGSTROMS REMARK 525 HOH A2004 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A2005 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH A2009 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH A2014 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A2019 DISTANCE = 7.16 ANGSTROMS REMARK 525 HOH A2020 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A2021 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH A2022 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A2023 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A2024 DISTANCE = 9.20 ANGSTROMS REMARK 525 HOH A2025 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A2027 DISTANCE = 8.04 ANGSTROMS REMARK 525 HOH A2028 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH A2029 DISTANCE = 8.53 ANGSTROMS REMARK 525 HOH A2030 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH A2031 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH A2032 DISTANCE = 9.09 ANGSTROMS REMARK 525 HOH A2033 DISTANCE = 9.40 ANGSTROMS REMARK 525 HOH A2034 DISTANCE = 10.68 ANGSTROMS REMARK 525 HOH A2035 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH A2036 DISTANCE = 9.52 ANGSTROMS REMARK 525 HOH A2037 DISTANCE = 10.05 ANGSTROMS REMARK 525 HOH A2038 DISTANCE = 11.11 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 9.76 ANGSTROMS REMARK 525 HOH A2255 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A2257 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A2268 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A2270 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A2290 DISTANCE = 7.84 ANGSTROMS REMARK 525 HOH A2291 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A2298 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A2310 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH B3004 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH B3009 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B3012 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B3039 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B3043 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH B3053 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B3061 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B3069 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B3074 DISTANCE = 7.26 ANGSTROMS REMARK 525 HOH B3075 DISTANCE = 7.95 ANGSTROMS REMARK 525 HOH B3076 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH B3077 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B3078 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B3080 DISTANCE = 7.51 ANGSTROMS REMARK 525 HOH B3081 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH B3084 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH B3086 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH B3087 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B3090 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH B3092 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH B3094 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH B3095 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B3096 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B3097 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B3098 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH B3100 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B3102 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH B3108 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B3109 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH B3110 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B3114 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH B3116 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B3119 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B3120 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B3122 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B3123 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH B3124 DISTANCE = 8.81 ANGSTROMS REMARK 525 HOH B3126 DISTANCE = 7.94 ANGSTROMS REMARK 525 HOH B3127 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B3128 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH B3130 DISTANCE = 8.41 ANGSTROMS REMARK 525 HOH B3131 DISTANCE = 10.52 ANGSTROMS REMARK 525 HOH B3132 DISTANCE = 10.17 ANGSTROMS REMARK 525 HOH B3133 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B3134 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B3135 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B3136 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B3139 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH B3140 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH B3141 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH B3142 DISTANCE = 7.56 ANGSTROMS REMARK 525 HOH B3143 DISTANCE = 8.18 ANGSTROMS REMARK 525 HOH B3144 DISTANCE = 7.01 ANGSTROMS REMARK 525 HOH B3145 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH B3146 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B3147 DISTANCE = 8.05 ANGSTROMS REMARK 525 HOH B3148 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH B3149 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B3151 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH B3153 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH B3154 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH B3155 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B3156 DISTANCE = 7.91 ANGSTROMS REMARK 525 HOH B3157 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH B3158 DISTANCE = 8.97 ANGSTROMS REMARK 525 HOH B3159 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B3160 DISTANCE = 9.32 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CMQ RELATED DB: PDB REMARK 900 BIPD OF BURKHOLDERIA PSEUDOMALLEI REMARK 900 RELATED ID: 2IXR RELATED DB: PDB REMARK 900 BIPD OF BURKHOLDERIA PSEUDOMALLEI REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CLONING STRATEGY MEANS THAT THE EXPRESSED PROTEIN REMARK 999 STARTS AT RESIDUE GLY 8 AND THE FOLLOWING RESIDUE IS SER REMARK 999 INSTEAD OF ARG IN THE CORRECT SEQUENCE. NONE OF THESE REMARK 999 RESIDUES WERE VISIBLE IN THE ELECTRON DENSITY ANYHOW. DBREF 2IZP A 1008 1310 UNP Q63K37 Q63K37_BURPS 8 310 DBREF 2IZP B 2008 2310 UNP Q63K37 Q63K37_BURPS 8 310 SEQADV 2IZP SER A 1009 UNP Q63K37 ARG 9 CONFLICT SEQADV 2IZP SER B 2009 UNP Q63K37 ARG 9 CONFLICT SEQRES 1 A 303 GLY SER ALA LEU THR VAL ARG ASP TRP PRO ALA LEU GLU SEQRES 2 A 303 ALA LEU ALA LYS THR MET PRO ALA ASP ALA GLY ALA ARG SEQRES 3 A 303 ALA MET THR ASP ASP ASP LEU ARG ALA ALA GLY VAL ASP SEQRES 4 A 303 ARG ARG VAL PRO GLU GLN LYS LEU GLY ALA ALA ILE ASP SEQRES 5 A 303 GLU PHE ALA SER LEU ARG LEU PRO ASP ARG ILE ASP GLY SEQRES 6 A 303 ARG PHE VAL ASP GLY ARG ARG ALA ASN LEU THR VAL PHE SEQRES 7 A 303 ASP ASP ALA ARG VAL ALA VAL ARG GLY HIS ALA ARG ALA SEQRES 8 A 303 GLN ARG ASN LEU LEU GLU ARG LEU GLU THR GLU LEU LEU SEQRES 9 A 303 GLY GLY THR LEU ASP THR ALA GLY ASP GLU GLY GLY ILE SEQRES 10 A 303 GLN PRO ASP PRO ILE LEU GLN GLY LEU VAL ASP VAL ILE SEQRES 11 A 303 GLY GLN GLY LYS SER ASP ILE ASP ALA TYR ALA THR ILE SEQRES 12 A 303 VAL GLU GLY LEU THR LYS TYR PHE GLN SER VAL ALA ASP SEQRES 13 A 303 VAL MET SER LYS LEU GLN ASP TYR ILE SER ALA LYS ASP SEQRES 14 A 303 ASP LYS ASN MET LYS ILE ASP GLY GLY LYS ILE LYS ALA SEQRES 15 A 303 LEU ILE GLN GLN VAL ILE ASP HIS LEU PRO THR MET GLN SEQRES 16 A 303 LEU PRO LYS GLY ALA ASP ILE ALA ARG TRP ARG LYS GLU SEQRES 17 A 303 LEU GLY ASP ALA VAL SER ILE SER ASP SER GLY VAL VAL SEQRES 18 A 303 THR ILE ASN PRO ASP LYS LEU ILE LYS MET ARG ASP SER SEQRES 19 A 303 LEU PRO PRO ASP GLY THR VAL TRP ASP THR ALA ARG TYR SEQRES 20 A 303 GLN ALA TRP ASN THR ALA PHE SER GLY GLN LYS ASP ASN SEQRES 21 A 303 ILE GLN ASN ASP VAL GLN THR LEU VAL GLU LYS TYR SER SEQRES 22 A 303 HIS GLN ASN SER ASN PHE ASP ASN LEU VAL LYS VAL LEU SEQRES 23 A 303 SER GLY ALA ILE SER THR LEU THR ASP THR ALA LYS SER SEQRES 24 A 303 TYR LEU GLN ILE SEQRES 1 B 303 GLY SER ALA LEU THR VAL ARG ASP TRP PRO ALA LEU GLU SEQRES 2 B 303 ALA LEU ALA LYS THR MET PRO ALA ASP ALA GLY ALA ARG SEQRES 3 B 303 ALA MET THR ASP ASP ASP LEU ARG ALA ALA GLY VAL ASP SEQRES 4 B 303 ARG ARG VAL PRO GLU GLN LYS LEU GLY ALA ALA ILE ASP SEQRES 5 B 303 GLU PHE ALA SER LEU ARG LEU PRO ASP ARG ILE ASP GLY SEQRES 6 B 303 ARG PHE VAL ASP GLY ARG ARG ALA ASN LEU THR VAL PHE SEQRES 7 B 303 ASP ASP ALA ARG VAL ALA VAL ARG GLY HIS ALA ARG ALA SEQRES 8 B 303 GLN ARG ASN LEU LEU GLU ARG LEU GLU THR GLU LEU LEU SEQRES 9 B 303 GLY GLY THR LEU ASP THR ALA GLY ASP GLU GLY GLY ILE SEQRES 10 B 303 GLN PRO ASP PRO ILE LEU GLN GLY LEU VAL ASP VAL ILE SEQRES 11 B 303 GLY GLN GLY LYS SER ASP ILE ASP ALA TYR ALA THR ILE SEQRES 12 B 303 VAL GLU GLY LEU THR LYS TYR PHE GLN SER VAL ALA ASP SEQRES 13 B 303 VAL MET SER LYS LEU GLN ASP TYR ILE SER ALA LYS ASP SEQRES 14 B 303 ASP LYS ASN MET LYS ILE ASP GLY GLY LYS ILE LYS ALA SEQRES 15 B 303 LEU ILE GLN GLN VAL ILE ASP HIS LEU PRO THR MET GLN SEQRES 16 B 303 LEU PRO LYS GLY ALA ASP ILE ALA ARG TRP ARG LYS GLU SEQRES 17 B 303 LEU GLY ASP ALA VAL SER ILE SER ASP SER GLY VAL VAL SEQRES 18 B 303 THR ILE ASN PRO ASP LYS LEU ILE LYS MET ARG ASP SER SEQRES 19 B 303 LEU PRO PRO ASP GLY THR VAL TRP ASP THR ALA ARG TYR SEQRES 20 B 303 GLN ALA TRP ASN THR ALA PHE SER GLY GLN LYS ASP ASN SEQRES 21 B 303 ILE GLN ASN ASP VAL GLN THR LEU VAL GLU LYS TYR SER SEQRES 22 B 303 HIS GLN ASN SER ASN PHE ASP ASN LEU VAL LYS VAL LEU SEQRES 23 B 303 SER GLY ALA ILE SER THR LEU THR ASP THR ALA LYS SER SEQRES 24 B 303 TYR LEU GLN ILE FORMUL 3 HOH *681(H2 O) HELIX 1 1 THR A 1036 ALA A 1042 1 7 HELIX 2 2 ARG A 1047 LEU A 1064 1 18 HELIX 3 3 ASN A 1081 LEU A 1111 1 31 HELIX 4 4 ILE A 1129 LEU A 1168 1 40 HELIX 5 5 ASP A 1183 HIS A 1197 1 15 HELIX 6 6 ASP A 1208 GLY A 1217 1 10 HELIX 7 7 PRO A 1232 ASP A 1240 1 9 HELIX 8 8 THR A 1251 THR A 1301 1 51 HELIX 9 9 ARG B 2047 SER B 2063 1 17 HELIX 10 10 LEU B 2082 GLY B 2112 1 31 HELIX 11 11 ASP B 2127 LEU B 2168 1 42 HELIX 12 12 GLN B 2169 TYR B 2171 5 3 HELIX 13 13 ASP B 2183 HIS B 2197 1 15 HELIX 14 14 ASP B 2208 GLY B 2217 1 10 HELIX 15 15 PRO B 2232 ASP B 2240 1 9 HELIX 16 16 ASP B 2250 LEU B 2300 1 51 SHEET 1 AA 2 ASP A1068 ILE A1070 0 SHEET 2 AA 2 ARG A1073 VAL A1075 -1 O ARG A1073 N ILE A1070 SHEET 1 AB 3 ILE A1172 ALA A1174 0 SHEET 2 AB 3 ASN A1179 ILE A1182 -1 O LYS A1181 N SER A1173 SHEET 3 AB 3 THR A1247 ASP A1250 -1 O THR A1247 N ILE A1182 SHEET 1 AC 3 MET A1201 GLN A1202 0 SHEET 2 AC 3 VAL A1227 ILE A1230 -1 O VAL A1228 N MET A1201 SHEET 3 AC 3 VAL A1220 ILE A1222 -1 O SER A1221 N THR A1229 SHEET 1 BA 2 ASP B2068 ILE B2070 0 SHEET 2 BA 2 ARG B2073 VAL B2075 -1 O ARG B2073 N ILE B2070 SHEET 1 BB 2 LYS B2181 ILE B2182 0 SHEET 2 BB 2 THR B2247 VAL B2248 -1 O THR B2247 N ILE B2182 SHEET 1 BC 3 THR B2200 GLN B2202 0 SHEET 2 BC 3 VAL B2227 ILE B2230 -1 O VAL B2228 N MET B2201 SHEET 3 BC 3 VAL B2220 ILE B2222 -1 O SER B2221 N THR B2229 CRYST1 53.509 56.204 84.208 90.00 94.47 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018688 0.000000 0.001461 0.00000 SCALE2 0.000000 0.017792 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011912 0.00000