HEADER TRANSFERASE 26-JUL-06 2IZR
TITLE STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CASEIN KINASE I ISOFORM GAMMA-3;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 35-362;
COMPND 5 SYNONYM: CKI-GAMMA 3, CASEIN KINASE 1 GAMMA 3;
COMPND 6 EC: 2.7.11.1;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PLIC-SGC
KEYWDS SERINE/THREONINE-PROTEIN KINASE, KINASE, TRANSFERASE, ATP-BINDING,
KEYWDS 2 PHOSPHORYLATION, NUCLEOTIDE-BINDING, ALTERNATIVE SPLICING, WNT
KEYWDS 3 SIGNALING PATHWAY, SERINE/THREONINE KINASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.BUNKOCZI,E.SALAH,P.RELLOS,S.DAS,O.FEDOROV,P.SAVITSKY,
AUTHOR 2 J.E.DEBRECZENI,O.GILEADI,M.SUNDSTROM,A.EDWARDS,C.ARROWSMITH,
AUTHOR 3 J.WEIGELT,F.VON DELFT,S.KNAPP
REVDAT 5 13-DEC-23 2IZR 1 LINK
REVDAT 4 28-FEB-18 2IZR 1 SOURCE
REVDAT 3 24-JAN-18 2IZR 1 AUTHOR JRNL
REVDAT 2 24-FEB-09 2IZR 1 VERSN
REVDAT 1 01-AUG-06 2IZR 0
JRNL AUTH G.BUNKOCZI,E.SALAH,P.RELLOS,S.DAS,O.FEDOROV,P.SAVITSKY,
JRNL AUTH 2 J.E.DEBRECZENI,O.GILEADI,M.SUNDSTROM,A.EDWARDS,C.ARROWSMITH,
JRNL AUTH 3 J.WEIGELT,F.VON DELFT,S.KNAPP
JRNL TITL INHIBITOR BINDING BY CASEIN KINASES
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.30 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0019
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.15
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0
REMARK 3 NUMBER OF REFLECTIONS : 94592
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.132
REMARK 3 R VALUE (WORKING SET) : 0.130
REMARK 3 FREE R VALUE : 0.158
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 4952
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33
REMARK 3 REFLECTION IN BIN (WORKING SET) : 4878
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : 0.2100
REMARK 3 BIN FREE R VALUE SET COUNT : 257
REMARK 3 BIN FREE R VALUE : 0.2380
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2413
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 474
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.82
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.23000
REMARK 3 B22 (A**2) : -0.23000
REMARK 3 B33 (A**2) : 0.34000
REMARK 3 B12 (A**2) : -0.11000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.037
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.038
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.262
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2609 ; 0.012 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 1827 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3529 ; 1.419 ; 1.993
REMARK 3 BOND ANGLES OTHERS (DEGREES): 4437 ; 0.918 ; 3.001
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 302 ; 6.044 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;33.230 ;23.415
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 471 ;11.331 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.068 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 383 ; 0.086 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2826 ; 0.007 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 542 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 541 ; 0.224 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1885 ; 0.193 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1278 ; 0.188 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): 1256 ; 0.084 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 334 ; 0.160 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.378 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.311 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 41 ; 0.178 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1591 ; 5.175 ; 3.000
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2479 ; 6.274 ; 5.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1197 ; 7.939 ; 8.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1050 ; 9.115 ;11.000
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS.
REMARK 4
REMARK 4 2IZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-06.
REMARK 100 THE DEPOSITION ID IS D_1290029502.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 04-MAR-06
REMARK 200 TEMPERATURE (KELVIN) : 100.0
REMARK 200 PH : 7.00
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X10SA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.978978
REMARK 200 MONOCHROMATOR : SI111
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99653
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300
REMARK 200 RESOLUTION RANGE LOW (A) : 49.100
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9
REMARK 200 DATA REDUNDANCY : 6.300
REMARK 200 R MERGE (I) : 0.05000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.4000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40
REMARK 200 COMPLETENESS FOR SHELL (%) : 79.7
REMARK 200 DATA REDUNDANCY IN SHELL : 2.40
REMARK 200 R MERGE FOR SHELL (I) : 0.30000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 2CHL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG10K, 0.20 M MGCL2, 0.1 M TRIS
REMARK 280 PH=7.0, PH 7.00
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+2/3
REMARK 290 6555 -X,-X+Y,-Z+1/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.44800
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 148.89600
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 148.89600
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 74.44800
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PQS
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 CASEIN KINASES ARE OPERATIONALLY DEFINED BY THEIR
REMARK 400 PREFERENTIAL UTILIZATION OF ACIDIC PROTEINS SUCH AS CASEINS AS
REMARK 400 SUBSTRATES.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A 33
REMARK 465 MET A 34
REMARK 465 GLY A 35
REMARK 465 GLY A 52
REMARK 465 GLY A 335
REMARK 465 ALA A 336
REMARK 465 VAL A 337
REMARK 465 GLN A 338
REMARK 465 GLN A 339
REMARK 465 ASP A 340
REMARK 465 PRO A 341
REMARK 465 ALA A 342
REMARK 465 LEU A 343
REMARK 465 SER A 344
REMARK 465 SER A 345
REMARK 465 ASN A 346
REMARK 465 ARG A 347
REMARK 465 GLU A 348
REMARK 465 ALA A 349
REMARK 465 HIS A 350
REMARK 465 GLN A 351
REMARK 465 HIS A 352
REMARK 465 ARG A 353
REMARK 465 ASP A 354
REMARK 465 LYS A 355
REMARK 465 MET A 356
REMARK 465 GLN A 357
REMARK 465 GLN A 358
REMARK 465 SER A 359
REMARK 465 LYS A 360
REMARK 465 ASN A 361
REMARK 465 GLN A 362
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LYS A 47 CE NZ
REMARK 470 LYS A 48 NZ
REMARK 470 PHE A 54 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 GLU A 56 CG CD OE1 OE2
REMARK 470 ARG A 79 CD NE CZ NH1 NH2
REMARK 470 ARG A 88 CD NE CZ NH1 NH2
REMARK 470 LYS A 91 CD CE NZ
REMARK 470 LYS A 110 CE NZ
REMARK 470 LYS A 176 CG CD CE NZ
REMARK 470 LYS A 198 CG CD CE NZ
REMARK 470 LYS A 253 CD CE NZ
REMARK 470 LYS A 258 NZ
REMARK 470 GLU A 274 CD OE1 OE2
REMARK 470 ARG A 292 CZ NH1 NH2
REMARK 470 GLN A 329 CG CD OE1 NE2
REMARK 470 THR A 332 OG1 CG2
REMARK 470 VAL A 334 CG1 CG2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 2199 O HOH A 2470 2.06
REMARK 500 O HOH A 2127 O HOH A 2267 2.09
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 MET A 216 CG - SD - CE ANGL. DEV. = 11.2 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 42 -1.54 -141.23
REMARK 500 ASP A 162 42.79 -141.31
REMARK 500 ASP A 185 79.79 71.43
REMARK 500 GLU A 205 -166.98 -126.71
REMARK 500 THR A 210 -27.71 -147.09
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2020 DISTANCE = 6.60 ANGSTROMS
REMARK 525 HOH A2032 DISTANCE = 5.92 ANGSTROMS
REMARK 525 HOH A2054 DISTANCE = 6.04 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A1337 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 185 OD2
REMARK 620 2 HOH A2263 O 106.3
REMARK 620 3 HOH A2269 O 163.6 87.3
REMARK 620 4 HOH A2274 O 91.2 98.1 96.0
REMARK 620 5 HOH A2286 O 81.1 95.2 88.7 166.1
REMARK 620 6 HOH A2287 O 81.1 171.2 86.2 76.8 90.5
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A1336 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A2062 O
REMARK 620 2 HOH A2063 O 91.7
REMARK 620 3 HOH A2119 O 92.9 94.7
REMARK 620 4 HOH A2138 O 174.4 91.9 91.0
REMARK 620 5 HOH A2139 O 80.1 89.1 172.1 95.8
REMARK 620 6 HOH A2165 O 83.9 173.1 80.3 92.9 95.4
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1336
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1337
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1338
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1339
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1340
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1341
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BRK A1335
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGO A1342
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2CHL RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE 1 GAMMA 3
REMARK 900 RELATED ID: 2IZS RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
REMARK 900 RELATED ID: 2IZT RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
REMARK 900 RELATED ID: 2IZU RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
DBREF 2IZR A 33 34 PDB 2IZR 2IZR 33 34
DBREF 2IZR A 35 362 UNP Q9Y6M4 KC1G3_HUMAN 35 362
SEQADV 2IZR ALA A 187 UNP Q9Y6M4 GLY 187 CONFLICT
SEQRES 1 A 330 SER MET GLY VAL LEU MET VAL GLY PRO ASN PHE ARG VAL
SEQRES 2 A 330 GLY LYS LYS ILE GLY CYS GLY ASN PHE GLY GLU LEU ARG
SEQRES 3 A 330 LEU GLY LYS ASN LEU TYR THR ASN GLU TYR VAL ALA ILE
SEQRES 4 A 330 LYS LEU GLU PRO MET LYS SER ARG ALA PRO GLN LEU HIS
SEQRES 5 A 330 LEU GLU TYR ARG PHE TYR LYS GLN LEU GLY SER GLY ASP
SEQRES 6 A 330 GLY ILE PRO GLN VAL TYR TYR PHE GLY PRO CYS GLY LYS
SEQRES 7 A 330 TYR ASN ALA MET VAL LEU GLU LEU LEU GLY PRO SER LEU
SEQRES 8 A 330 GLU ASP LEU PHE ASP LEU CYS ASP ARG THR PHE SER LEU
SEQRES 9 A 330 LYS THR VAL LEU MET ILE ALA ILE GLN LEU ILE SER ARG
SEQRES 10 A 330 MET GLU TYR VAL HIS SER LYS ASN LEU ILE TYR ARG ASP
SEQRES 11 A 330 VAL LYS PRO GLU ASN PHE LEU ILE GLY ARG PRO GLY ASN
SEQRES 12 A 330 LYS THR GLN GLN VAL ILE HIS ILE ILE ASP PHE ALA LEU
SEQRES 13 A 330 ALA LYS GLU TYR ILE ASP PRO GLU THR LYS LYS HIS ILE
SEQRES 14 A 330 PRO TYR ARG GLU HIS LYS SER LEU THR GLY THR ALA ARG
SEQRES 15 A 330 TYR MET SER ILE ASN THR HIS LEU GLY LYS GLU GLN SER
SEQRES 16 A 330 ARG ARG ASP ASP LEU GLU ALA LEU GLY HIS MET PHE MET
SEQRES 17 A 330 TYR PHE LEU ARG GLY SER LEU PRO TRP GLN GLY LEU LYS
SEQRES 18 A 330 ALA ASP THR LEU LYS GLU ARG TYR GLN LYS ILE GLY ASP
SEQRES 19 A 330 THR LYS ARG ALA THR PRO ILE GLU VAL LEU CYS GLU ASN
SEQRES 20 A 330 PHE PRO GLU MET ALA THR TYR LEU ARG TYR VAL ARG ARG
SEQRES 21 A 330 LEU ASP PHE PHE GLU LYS PRO ASP TYR ASP TYR LEU ARG
SEQRES 22 A 330 LYS LEU PHE THR ASP LEU PHE ASP ARG LYS GLY TYR MET
SEQRES 23 A 330 PHE ASP TYR GLU TYR ASP TRP ILE GLY LYS GLN LEU PRO
SEQRES 24 A 330 THR PRO VAL GLY ALA VAL GLN GLN ASP PRO ALA LEU SER
SEQRES 25 A 330 SER ASN ARG GLU ALA HIS GLN HIS ARG ASP LYS MET GLN
SEQRES 26 A 330 GLN SER LYS ASN GLN
HET BRK A1335 25
HET MG A1336 1
HET MG A1337 1
HET CL A1338 1
HET CL A1339 1
HET CL A1340 1
HET CL A1341 1
HET PGO A1342 5
HETNAM BRK {(2Z)-4-AMINO-2-[(4-METHOXYPHENYL)IMINO]-2,3-DIHYDRO-1,
HETNAM 2 BRK 3-THIAZOL-5-YL}(4-METHOXYPHENYL)METHANONE
HETNAM MG MAGNESIUM ION
HETNAM CL CHLORIDE ION
HETNAM PGO S-1,2-PROPANEDIOL
FORMUL 2 BRK C18 H17 N3 O3 S
FORMUL 3 MG 2(MG 2+)
FORMUL 5 CL 4(CL 1-)
FORMUL 9 PGO C3 H8 O2
FORMUL 10 HOH *474(H2 O)
HELIX 1 1 GLN A 82 GLY A 94 1 13
HELIX 2 2 SER A 122 CYS A 130 1 9
HELIX 3 3 SER A 135 LYS A 156 1 22
HELIX 4 4 LYS A 164 GLU A 166 5 3
HELIX 5 5 ARG A 172 LYS A 176 5 5
HELIX 6 6 SER A 217 LEU A 222 1 6
HELIX 7 7 SER A 227 GLY A 245 1 19
HELIX 8 8 THR A 256 THR A 271 1 16
HELIX 9 9 PRO A 272 CYS A 277 1 6
HELIX 10 10 PHE A 280 LEU A 293 1 14
HELIX 11 11 ASP A 300 LYS A 315 1 16
SHEET 1 AA 6 MET A 38 VAL A 39 0
SHEET 2 AA 6 PHE A 43 LYS A 48 -1 O PHE A 43 N VAL A 39
SHEET 3 AA 6 LEU A 57 ASN A 62 -1 O LEU A 59 N GLY A 46
SHEET 4 AA 6 GLU A 67 PRO A 75 -1 O GLU A 67 N ASN A 62
SHEET 5 AA 6 TYR A 111 GLU A 117 -1 O ASN A 112 N GLU A 74
SHEET 6 AA 6 VAL A 102 CYS A 108 -1 N TYR A 103 O VAL A 115
SHEET 1 AB 2 LEU A 158 ILE A 159 0
SHEET 2 AB 2 LYS A 190 GLU A 191 -1 O LYS A 190 N ILE A 159
SHEET 1 AC 2 PHE A 168 ILE A 170 0
SHEET 2 AC 2 ILE A 181 ILE A 183 -1 O HIS A 182 N LEU A 169
LINK OD2 ASP A 185 MG MG A1337 1555 1555 2.24
LINK MG MG A1336 O HOH A2062 1555 1555 2.18
LINK MG MG A1336 O HOH A2063 1555 1555 1.98
LINK MG MG A1336 O HOH A2119 1555 1555 2.14
LINK MG MG A1336 O HOH A2138 1555 1555 2.04
LINK MG MG A1336 O HOH A2139 1555 1555 2.05
LINK MG MG A1336 O HOH A2165 1555 1555 2.14
LINK MG MG A1337 O HOH A2263 1555 1555 1.96
LINK MG MG A1337 O HOH A2269 1555 1555 2.04
LINK MG MG A1337 O HOH A2274 1555 1555 1.82
LINK MG MG A1337 O HOH A2286 1555 1555 2.10
LINK MG MG A1337 O HOH A2287 1555 1555 2.16
SITE 1 AC1 6 HOH A2062 HOH A2063 HOH A2119 HOH A2138
SITE 2 AC1 6 HOH A2139 HOH A2165
SITE 1 AC2 6 ASP A 185 HOH A2263 HOH A2269 HOH A2274
SITE 2 AC2 6 HOH A2286 HOH A2287
SITE 1 AC3 4 LYS A 137 TYR A 317 MET A 318 HOH A2110
SITE 1 AC4 3 LYS A 61 ARG A 149 HOH A2123
SITE 1 AC5 4 ARG A 214 GLN A 250 ARG A 260 HOH A2352
SITE 1 AC6 3 GLU A 67 TYR A 68 ARG A 172
SITE 1 AC7 9 ASN A 53 LEU A 57 LEU A 116 GLU A 117
SITE 2 AC7 9 LEU A 118 LEU A 119 GLY A 120 ILE A 184
SITE 3 AC7 9 HOH A2060
SITE 1 AC8 5 GLY A 50 ASN A 53 ASP A 125 HOH A2174
SITE 2 AC8 5 HOH A2181
CRYST1 56.724 56.724 223.344 90.00 90.00 120.00 P 31 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017629 0.010178 0.000000 0.00000
SCALE2 0.000000 0.020356 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004477 0.00000