HEADER TRANSFERASE 26-JUL-06 2IZU
TITLE STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CASEIN KINASE I ISOFORM GAMMA-3;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUES 35-362;
COMPND 5 SYNONYM: CKI-GAMMA 3, CASEIN KINASE 1 GAMMA 3;
COMPND 6 EC: 2.7.11.1;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PLIC-SGC
KEYWDS SERINE/THREONINE-PROTEIN KINASE, KINASE, TRANSFERASE, ATP- BINDING,
KEYWDS 2 PHOSPHORYLATION, NUCLEOTIDE-BINDING, WNT SIGNALING PATHWAY,
KEYWDS 3 SERINE/THREONINE KINASE
EXPDTA X-RAY DIFFRACTION
AUTHOR G.BUNKOCZI,E.SALAH,P.RELLOS,S.DAS,O.FEDOROV,P.SAVITSKY,
AUTHOR 2 J.E.DEBRECZENI,O.GILEADI,M.SUNDSTROM,A.EDWARDS,C.ARROWSMITH,
AUTHOR 3 J.WEIGELT,F.VON DELFT,S.KNAPP
REVDAT 7 13-DEC-23 2IZU 1 REMARK
REVDAT 6 04-APR-18 2IZU 1 REMARK
REVDAT 5 28-FEB-18 2IZU 1 SOURCE
REVDAT 4 24-JAN-18 2IZU 1 AUTHOR JRNL
REVDAT 3 13-JUL-11 2IZU 1 VERSN
REVDAT 2 24-FEB-09 2IZU 1 VERSN
REVDAT 1 01-AUG-06 2IZU 0
JRNL AUTH G.BUNKOCZI,E.SALAH,P.RELLOS,S.DAS,O.FEDOROV,P.SAVITSKY,
JRNL AUTH 2 J.E.DEBRECZENI,O.GILEADI,M.SUNDSTROM,A.EDWARDS,C.ARROWSMITH,
JRNL AUTH 3 J.WEIGELT,F.VON DELFT,S.KNAPP
JRNL TITL INHIBITOR BINDING BY CASEIN KINASES
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.85 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0019
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.57
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 86.1
REMARK 3 NUMBER OF REFLECTIONS : 30113
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.157
REMARK 3 R VALUE (WORKING SET) : 0.155
REMARK 3 FREE R VALUE : 0.199
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1633
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90
REMARK 3 REFLECTION IN BIN (WORKING SET) : 876
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : 0.2400
REMARK 3 BIN FREE R VALUE SET COUNT : 56
REMARK 3 BIN FREE R VALUE : 0.3130
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2414
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 361
REMARK 3
REMARK 3 B VALUES.
REMARK 3 B VALUE TYPE : LIKELY RESIDUAL
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.79
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.22000
REMARK 3 B22 (A**2) : 0.22000
REMARK 3 B33 (A**2) : -0.33000
REMARK 3 B12 (A**2) : 0.11000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.120
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.092
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2550 ; 0.011 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 1796 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3444 ; 1.233 ; 1.989
REMARK 3 BOND ANGLES OTHERS (DEGREES): 4332 ; 0.877 ; 3.001
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 295 ; 6.190 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;32.933 ;23.089
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 447 ;13.007 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;14.299 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 365 ; 0.074 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2774 ; 0.005 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 544 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 526 ; 0.197 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1887 ; 0.194 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1236 ; 0.181 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): 1288 ; 0.083 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 287 ; 0.162 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.140 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 31 ; 0.225 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.115 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1622 ; 3.023 ; 3.000
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2404 ; 3.976 ; 5.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1198 ; 5.846 ; 8.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1040 ; 7.545 ;11.000
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 35 A 107
REMARK 3 ORIGIN FOR THE GROUP (A): -32.9252 34.0789 -29.0575
REMARK 3 T TENSOR
REMARK 3 T11: 0.0514 T22: -0.0173
REMARK 3 T33: 0.0122 T12: 0.0330
REMARK 3 T13: -0.0140 T23: -0.0059
REMARK 3 L TENSOR
REMARK 3 L11: 2.1777 L22: 1.1989
REMARK 3 L33: 0.7927 L12: -0.2563
REMARK 3 L13: 1.0102 L23: -0.5932
REMARK 3 S TENSOR
REMARK 3 S11: -0.0881 S12: -0.1338 S13: 0.0601
REMARK 3 S21: 0.0710 S22: -0.0072 S23: 0.0490
REMARK 3 S31: -0.0962 S32: -0.0589 S33: 0.0953
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 108 A 322
REMARK 3 ORIGIN FOR THE GROUP (A): -17.8112 19.0618 -15.8857
REMARK 3 T TENSOR
REMARK 3 T11: -0.0401 T22: -0.0612
REMARK 3 T33: -0.0629 T12: 0.0036
REMARK 3 T13: 0.0049 T23: 0.0058
REMARK 3 L TENSOR
REMARK 3 L11: 0.7445 L22: 0.8528
REMARK 3 L33: 1.0083 L12: -0.0164
REMARK 3 L13: 0.1794 L23: 0.0626
REMARK 3 S TENSOR
REMARK 3 S11: -0.0047 S12: -0.0897 S13: -0.0369
REMARK 3 S21: 0.0826 S22: 0.0013 S23: 0.0303
REMARK 3 S31: -0.0005 S32: 0.0281 S33: 0.0034
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS.
REMARK 4
REMARK 4 2IZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-06.
REMARK 100 THE DEPOSITION ID IS D_1290029505.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 23-APR-06
REMARK 200 TEMPERATURE (KELVIN) : 100.0
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : OSMIC HR MULTILAYER OPTICS
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32225
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 28.500
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 80.7
REMARK 200 DATA REDUNDANCY : 4.500
REMARK 200 R MERGE (I) : 0.06000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90
REMARK 200 COMPLETENESS FOR SHELL (%) : 24.7
REMARK 200 DATA REDUNDANCY IN SHELL : 1.60
REMARK 200 R MERGE FOR SHELL (I) : 0.39000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 2CHL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.00
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.20 M NAFORMATE
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+2/3
REMARK 290 6555 -X,-X+Y,-Z+1/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.17633
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 148.35267
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 148.35267
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 74.17633
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PQS
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 400
REMARK 400 COMPOUND
REMARK 400 CASEIN KINASES ARE OPERATIONALLY DEFINED BY THEIR
REMARK 400 PREFERENTIAL UTILIZATION OF ACIDIC PROTEINS SUCH AS CASEINS AS
REMARK 400 SUBSTRATES.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A 33
REMARK 465 MET A 34
REMARK 465 GLY A 35
REMARK 465 GLY A 52
REMARK 465 ASN A 53
REMARK 465 GLY A 335
REMARK 465 ALA A 336
REMARK 465 VAL A 337
REMARK 465 GLN A 338
REMARK 465 GLN A 339
REMARK 465 ASP A 340
REMARK 465 PRO A 341
REMARK 465 ALA A 342
REMARK 465 LEU A 343
REMARK 465 SER A 344
REMARK 465 SER A 345
REMARK 465 ASN A 346
REMARK 465 ARG A 347
REMARK 465 GLU A 348
REMARK 465 ALA A 349
REMARK 465 HIS A 350
REMARK 465 GLN A 351
REMARK 465 HIS A 352
REMARK 465 ARG A 353
REMARK 465 ASP A 354
REMARK 465 LYS A 355
REMARK 465 MET A 356
REMARK 465 GLN A 357
REMARK 465 GLN A 358
REMARK 465 SER A 359
REMARK 465 LYS A 360
REMARK 465 ASN A 361
REMARK 465 GLN A 362
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 PHE A 54 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 LYS A 77 CD CE NZ
REMARK 470 ARG A 79 CG CD NE CZ NH1 NH2
REMARK 470 HIS A 84 ND1 CD2 CE1 NE2
REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 110 CD CE NZ
REMARK 470 LYS A 176 CG CD CE NZ
REMARK 470 GLU A 196 CD OE1 OE2
REMARK 470 LYS A 198 CD CE NZ
REMARK 470 LYS A 199 CE NZ
REMARK 470 LYS A 253 CG CD CE NZ
REMARK 470 LYS A 258 NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 2006 O HOH A 2007 2.01
REMARK 500 O GLN A 250 O HOH A 2259 2.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 2027 O HOH A 2163 5564 1.83
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ALA A 80 65.27 74.30
REMARK 500 ASP A 162 44.49 -140.89
REMARK 500 ASP A 185 86.79 68.65
REMARK 500 GLU A 205 -168.46 -127.37
REMARK 500 ASN A 279 -4.44 79.25
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2033 DISTANCE = 6.03 ANGSTROMS
REMARK 525 HOH A2062 DISTANCE = 6.23 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1337
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P01 A1335
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1336
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2CHL RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE 1 GAMMA 3
REMARK 900 RELATED ID: 2IUR RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF N-QUINOL FORM OF AROMATIC AMINE DEHYDROGENASE
REMARK 900 (AADH) FROM ALCALIGENES FAECALIS, FORM A COCRYSTAL COMPLEX WITH
REMARK 900 INHIBITOR
REMARK 900 RELATED ID: 2IZS RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
REMARK 900 RELATED ID: 2IZT RELATED DB: PDB
REMARK 900 STRUCTURE OF CASEIN KINASE GAMMA 3 IN COMPLEX WITH INHIBITOR
DBREF 2IZU A 33 34 PDB 2IZU 2IZU 33 34
DBREF 2IZU A 35 362 UNP Q9Y6M4 KC1G3_HUMAN 35 362
SEQADV 2IZU ALA A 187 UNP Q9Y6M4 GLY 187 CONFLICT
SEQRES 1 A 330 SER MET GLY VAL LEU MET VAL GLY PRO ASN PHE ARG VAL
SEQRES 2 A 330 GLY LYS LYS ILE GLY CYS GLY ASN PHE GLY GLU LEU ARG
SEQRES 3 A 330 LEU GLY LYS ASN LEU TYR THR ASN GLU TYR VAL ALA ILE
SEQRES 4 A 330 LYS LEU GLU PRO MET LYS SER ARG ALA PRO GLN LEU HIS
SEQRES 5 A 330 LEU GLU TYR ARG PHE TYR LYS GLN LEU GLY SER GLY ASP
SEQRES 6 A 330 GLY ILE PRO GLN VAL TYR TYR PHE GLY PRO CYS GLY LYS
SEQRES 7 A 330 TYR ASN ALA MET VAL LEU GLU LEU LEU GLY PRO SER LEU
SEQRES 8 A 330 GLU ASP LEU PHE ASP LEU CYS ASP ARG THR PHE SER LEU
SEQRES 9 A 330 LYS THR VAL LEU MET ILE ALA ILE GLN LEU ILE SER ARG
SEQRES 10 A 330 MET GLU TYR VAL HIS SER LYS ASN LEU ILE TYR ARG ASP
SEQRES 11 A 330 VAL LYS PRO GLU ASN PHE LEU ILE GLY ARG PRO GLY ASN
SEQRES 12 A 330 LYS THR GLN GLN VAL ILE HIS ILE ILE ASP PHE ALA LEU
SEQRES 13 A 330 ALA LYS GLU TYR ILE ASP PRO GLU THR LYS LYS HIS ILE
SEQRES 14 A 330 PRO TYR ARG GLU HIS LYS SER LEU THR GLY THR ALA ARG
SEQRES 15 A 330 TYR MET SER ILE ASN THR HIS LEU GLY LYS GLU GLN SER
SEQRES 16 A 330 ARG ARG ASP ASP LEU GLU ALA LEU GLY HIS MET PHE MET
SEQRES 17 A 330 TYR PHE LEU ARG GLY SER LEU PRO TRP GLN GLY LEU LYS
SEQRES 18 A 330 ALA ASP THR LEU LYS GLU ARG TYR GLN LYS ILE GLY ASP
SEQRES 19 A 330 THR LYS ARG ALA THR PRO ILE GLU VAL LEU CYS GLU ASN
SEQRES 20 A 330 PHE PRO GLU MET ALA THR TYR LEU ARG TYR VAL ARG ARG
SEQRES 21 A 330 LEU ASP PHE PHE GLU LYS PRO ASP TYR ASP TYR LEU ARG
SEQRES 22 A 330 LYS LEU PHE THR ASP LEU PHE ASP ARG LYS GLY TYR MET
SEQRES 23 A 330 PHE ASP TYR GLU TYR ASP TRP ILE GLY LYS GLN LEU PRO
SEQRES 24 A 330 THR PRO VAL GLY ALA VAL GLN GLN ASP PRO ALA LEU SER
SEQRES 25 A 330 SER ASN ARG GLU ALA HIS GLN HIS ARG ASP LYS MET GLN
SEQRES 26 A 330 GLN SER LYS ASN GLN
HET P01 A1335 27
HET EDO A1336 8
HET PO4 A1337 5
HETNAM P01 2-({6-[(3-CHLOROPHENYL)AMINO]-9-ISOPROPYL-9H-PURIN-2-
HETNAM 2 P01 YL}AMINO)-3-METHYLBUTAN-1-OL
HETNAM EDO 1,2-ETHANEDIOL
HETNAM PO4 PHOSPHATE ION
HETSYN P01 PURVALANOL A
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 P01 C19 H25 CL N6 O
FORMUL 3 EDO C2 H6 O2
FORMUL 4 PO4 O4 P 3-
FORMUL 5 HOH *361(H2 O)
HELIX 1 1 GLN A 82 GLY A 94 1 13
HELIX 2 2 SER A 122 CYS A 130 1 9
HELIX 3 3 SER A 135 LYS A 156 1 22
HELIX 4 4 LYS A 164 GLU A 166 5 3
HELIX 5 5 SER A 217 LEU A 222 1 6
HELIX 6 6 SER A 227 GLY A 245 1 19
HELIX 7 7 THR A 256 THR A 271 1 16
HELIX 8 8 PRO A 272 CYS A 277 1 6
HELIX 9 9 PHE A 280 ARG A 292 1 13
HELIX 10 10 ASP A 300 LYS A 315 1 16
SHEET 1 AA 6 MET A 38 VAL A 39 0
SHEET 2 AA 6 PHE A 43 GLY A 50 -1 O PHE A 43 N VAL A 39
SHEET 3 AA 6 GLU A 56 ASN A 62 -1 O LEU A 57 N ILE A 49
SHEET 4 AA 6 GLU A 67 PRO A 75 -1 O GLU A 67 N ASN A 62
SHEET 5 AA 6 TYR A 111 LEU A 116 -1 O ASN A 112 N GLU A 74
SHEET 6 AA 6 VAL A 102 CYS A 108 -1 N TYR A 103 O VAL A 115
SHEET 1 AB 2 LEU A 158 ILE A 159 0
SHEET 2 AB 2 LYS A 190 GLU A 191 -1 O LYS A 190 N ILE A 159
SHEET 1 AC 2 PHE A 168 LEU A 169 0
SHEET 2 AC 2 HIS A 182 ILE A 183 -1 O HIS A 182 N LEU A 169
SITE 1 AC1 6 ARG A 214 GLN A 250 GLY A 251 ARG A 260
SITE 2 AC1 6 HOH A2360 HOH A2361
SITE 1 AC2 14 ILE A 49 LEU A 57 ALA A 70 GLU A 117
SITE 2 AC2 14 LEU A 119 GLY A 120 GLU A 166 LEU A 169
SITE 3 AC2 14 ILE A 184 PRO A 331 THR A 332 PRO A 333
SITE 4 AC2 14 HOH A2124 HOH A2359
SITE 1 AC3 4 TYR A 289 ASP A 300 TYR A 303 HOH A2298
CRYST1 56.903 56.903 222.529 90.00 90.00 120.00 P 31 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017574 0.010146 0.000000 0.00000
SCALE2 0.000000 0.020292 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004494 0.00000