HEADER TRANSFERASE 03-AUG-06 2J0I TITLE CRYSTAL STRUCTURE OF THE HUMAN P21-ACTIVATED KINASE 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 291-591; COMPND 5 SYNONYM: HUMAN P21-ACTIVATED KINASE 4, PAK-4, P21-ACTIVATED KINASE 4; COMPND 6 EC: 2.7.1.37, 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PGEX-6P-2NDE-XHO KEYWDS PROTEIN KINASE, PHOSPHORYLATION, NUCLEOTIDE-BINDING, PAK4, STE20, KEYWDS 2 KINASE, TRANSFERASE, ATP-BINDING, ALTERNATIVE SPLICING, KEYWDS 3 SERINE/THREONINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.DEBRECZENI,J.ESWARAN,E.UGOCHUKWU,E.PAPAGRIGORIOU,A.TURNBULL,F.VON AUTHOR 2 DELFT,C.ARROWSMITH,J.WEIGELT,A.EDWARDS,M.SUNDSTROM,S.KNAPP REVDAT 7 06-NOV-24 2J0I 1 REMARK REVDAT 6 13-DEC-23 2J0I 1 REMARK REVDAT 5 08-MAY-19 2J0I 1 REMARK LINK REVDAT 4 31-JAN-18 2J0I 1 SOURCE REVDAT 3 24-JAN-18 2J0I 1 AUTHOR JRNL REVDAT 2 24-FEB-09 2J0I 1 VERSN REVDAT 1 17-AUG-06 2J0I 0 JRNL AUTH J.E.DEBRECZENI,J.ESWARAN,E.UGOCHUKWU,E.PAPAGRIGORIOU, JRNL AUTH 2 A.TURNBULL,F.VON DELFT,C.ARROWSMITH,J.WEIGELT,A.EDWARDS, JRNL AUTH 3 M.SUNDSTROM,S.KNAPP JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN P21-ACTIVATED KINASE 4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 46301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2460 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3201 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2255 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : 0.28000 REMARK 3 B33 (A**2) : -0.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.091 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.081 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.200 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2333 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1602 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3166 ; 1.147 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3918 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 295 ; 5.219 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;31.840 ;23.776 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 404 ;11.338 ;15.037 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;19.997 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 362 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2557 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 445 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 450 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1687 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1156 ; 0.165 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1150 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 144 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.098 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.287 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1585 ; 4.416 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2370 ; 5.218 ; 7.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 940 ; 5.795 ; 9.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 793 ; 7.346 ;12.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2J0I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1290029565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49277 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 43.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.330 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2CDZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 UL SITTING DROPS, 4DEG, 0.2M REMARK 280 K3(CIT), 0.1M BIS-TRIS PROPANE PH 6.5, 20% PEG3350, 10% ETHYLENE REMARK 280 GLYCOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.23900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.75700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.75700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.61950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.75700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.75700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 133.85850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.75700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.75700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.61950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.75700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.75700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 133.85850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.23900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 SER A 291 REMARK 465 PRO A 292 REMARK 465 GLN A 293 REMARK 465 ARG A 294 REMARK 465 GLU A 295 REMARK 465 PRO A 296 REMARK 465 GLN A 297 REMARK 465 ARG A 298 REMARK 465 VAL A 299 REMARK 465 THR A 590 REMARK 465 ARG A 591 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 358 CD OE1 NE2 REMARK 470 GLN A 374 CD OE1 NE2 REMARK 470 GLU A 376 CD OE1 OE2 REMARK 470 ARG A 411 CD NE CZ NH1 NH2 REMARK 470 LYS A 467 CD CE NZ REMARK 470 ARG A 471 CD NE CZ NH1 NH2 REMARK 470 LYS A 522 CG CD CE NZ REMARK 470 LYS A 525 CG CD CE NZ REMARK 470 ARG A 534 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 536 CD CE NZ REMARK 470 LYS A 568 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 372 17.26 59.21 REMARK 500 ASP A 440 45.26 -141.28 REMARK 500 PRO A 491 115.85 -37.36 REMARK 500 ASN A 537 30.75 -96.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1590 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1591 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1592 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1593 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CDZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN P21-ACTIVATED KINASE 4 IN COMPLEX REMARK 900 WITH CGP74514A DBREF 2J0I A 289 290 PDB 2J0I 2J0I 289 290 DBREF 2J0I A 291 591 UNP O96013 PAK4_HUMAN 291 591 SEQRES 1 A 303 GLY SER SER PRO GLN ARG GLU PRO GLN ARG VAL SER HIS SEQRES 2 A 303 GLU GLN PHE ARG ALA ALA LEU GLN LEU VAL VAL ASP PRO SEQRES 3 A 303 GLY ASP PRO ARG SER TYR LEU ASP ASN PHE ILE LYS ILE SEQRES 4 A 303 GLY GLU GLY SER THR GLY ILE VAL CYS ILE ALA THR VAL SEQRES 5 A 303 ARG SER SER GLY LYS LEU VAL ALA VAL LYS LYS MET ASP SEQRES 6 A 303 LEU ARG LYS GLN GLN ARG ARG GLU LEU LEU PHE ASN GLU SEQRES 7 A 303 VAL VAL ILE MET ARG ASP TYR GLN HIS GLU ASN VAL VAL SEQRES 8 A 303 GLU MET TYR ASN SER TYR LEU VAL GLY ASP GLU LEU TRP SEQRES 9 A 303 VAL VAL MET GLU PHE LEU GLU GLY GLY ALA LEU THR ASP SEQRES 10 A 303 ILE VAL THR HIS THR ARG MET ASN GLU GLU GLN ILE ALA SEQRES 11 A 303 ALA VAL CYS LEU ALA VAL LEU GLN ALA LEU SER VAL LEU SEQRES 12 A 303 HIS ALA GLN GLY VAL ILE HIS ARG ASP ILE LYS SER ASP SEQRES 13 A 303 SER ILE LEU LEU THR HIS ASP GLY ARG VAL LYS LEU SER SEQRES 14 A 303 ASP PHE GLY PHE CYS ALA GLN VAL SER LYS GLU VAL PRO SEQRES 15 A 303 ARG ARG LYS SEP LEU VAL GLY THR PRO TYR TRP MET ALA SEQRES 16 A 303 PRO GLU LEU ILE SER ARG LEU PRO TYR GLY PRO GLU VAL SEQRES 17 A 303 ASP ILE TRP SER LEU GLY ILE MET VAL ILE GLU MET VAL SEQRES 18 A 303 ASP GLY GLU PRO PRO TYR PHE ASN GLU PRO PRO LEU LYS SEQRES 19 A 303 ALA MET LYS MET ILE ARG ASP ASN LEU PRO PRO ARG LEU SEQRES 20 A 303 LYS ASN LEU HIS LYS VAL SER PRO SER LEU LYS GLY PHE SEQRES 21 A 303 LEU ASP ARG LEU LEU VAL ARG ASP PRO ALA GLN ARG ALA SEQRES 22 A 303 THR ALA ALA GLU LEU LEU LYS HIS PRO PHE LEU ALA LYS SEQRES 23 A 303 ALA GLY PRO PRO ALA SER ILE VAL PRO LEU MET ARG GLN SEQRES 24 A 303 ASN ARG THR ARG MODRES 2J0I SEP A 474 SER PHOSPHOSERINE HET SEP A 474 10 HET EDO A1590 4 HET EDO A1591 4 HET EDO A1592 4 HET EDO A1593 4 HETNAM SEP PHOSPHOSERINE HETNAM EDO 1,2-ETHANEDIOL HETSYN SEP PHOSPHONOSERINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 EDO 4(C2 H6 O2) FORMUL 6 HOH *205(H2 O) HELIX 1 1 SER A 300 VAL A 312 1 13 HELIX 2 2 ASP A 316 SER A 319 5 4 HELIX 3 3 ARG A 359 GLU A 361 5 3 HELIX 4 4 LEU A 362 MET A 370 1 9 HELIX 5 5 ALA A 402 THR A 410 1 9 HELIX 6 6 ASN A 413 GLN A 434 1 22 HELIX 7 7 LYS A 442 ASP A 444 5 3 HELIX 8 8 THR A 478 MET A 482 5 5 HELIX 9 9 ALA A 483 SER A 488 1 6 HELIX 10 10 PRO A 494 GLY A 511 1 18 HELIX 11 11 PRO A 519 ASN A 530 1 12 HELIX 12 12 ASN A 537 VAL A 541 5 5 HELIX 13 13 SER A 542 LEU A 553 1 12 HELIX 14 14 THR A 562 LEU A 567 1 6 HELIX 15 15 LYS A 568 ALA A 575 5 8 HELIX 16 16 PRO A 577 VAL A 582 1 6 HELIX 17 17 PRO A 583 MET A 585 5 3 SHEET 1 AA 5 LEU A 321 GLU A 329 0 SHEET 2 AA 5 ILE A 334 VAL A 340 -1 O VAL A 335 N ILE A 327 SHEET 3 AA 5 LEU A 346 ASP A 353 -1 O VAL A 347 N ALA A 338 SHEET 4 AA 5 GLU A 390 MET A 395 -1 O LEU A 391 N MET A 352 SHEET 5 AA 5 MET A 381 VAL A 387 -1 N TYR A 382 O VAL A 394 SHEET 1 AB 2 VAL A 436 ILE A 437 0 SHEET 2 AB 2 ALA A 463 GLN A 464 -1 O ALA A 463 N ILE A 437 SHEET 1 AC 2 ILE A 446 LEU A 448 0 SHEET 2 AC 2 VAL A 454 LEU A 456 -1 O LYS A 455 N LEU A 447 LINK C LYS A 473 N SEP A 474 1555 1555 1.33 LINK C SEP A 474 N LEU A 475 1555 1555 1.33 SITE 1 AC1 7 ASN A 323 ILE A 325 ILE A 337 ALA A 338 SITE 2 AC1 7 THR A 339 PHE A 364 HOH A2054 SITE 1 AC2 5 ILE A 327 PHE A 397 LEU A 398 HOH A2203 SITE 2 AC2 5 HOH A2204 SITE 1 AC3 4 LYS A 350 ASP A 440 ASP A 458 GLY A 460 SITE 1 AC4 5 GLU A 366 VAL A 379 LEU A 456 SER A 457 SITE 2 AC4 5 PHE A 459 CRYST1 63.514 63.514 178.478 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015745 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005603 0.00000