HEADER TOXIN 24-AUG-06 2J42 TITLE LOW QUALITY CRYSTAL STRUCTURE OF THE TRANSPORT COMPONENT C2-II OF THE TITLE 2 C2-TOXIN FROM CLOSTRIDIUM BOTULINUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: C2 TOXIN COMPONENT-II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: C2-II; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM; SOURCE 3 ORGANISM_TAXID: 1491; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS TOXIN, CLOSTRIDIUM BOTULINUM, C2-II EXPDTA X-RAY DIFFRACTION AUTHOR C.SCHLEBERGER,H.HOCHMANN,H.BARTH,K.AKTORIES,G.E.SCHULZ REVDAT 4 13-DEC-23 2J42 1 REMARK REVDAT 3 24-FEB-09 2J42 1 VERSN REVDAT 2 30-NOV-06 2J42 1 JRNL REVDAT 1 11-OCT-06 2J42 0 JRNL AUTH C.SCHLEBERGER,H.HOCHMANN,H.BARTH,K.AKTORIES,G.E.SCHULZ JRNL TITL STRUCTURE AND ACTION OF THE BINARY C2 TOXIN FROM CLOSTRIDIUM JRNL TITL 2 BOTULINUM. JRNL REF J.MOL.BIOL. V. 364 705 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 17027031 JRNL DOI 10.1016/J.JMB.2006.09.002 REMARK 2 REMARK 2 RESOLUTION. 3.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT BUSTER/TNT REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 14703 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : 0.4137 REMARK 3 R VALUE (WORKING + TEST SET) : 0.413 REMARK 3 R VALUE (WORKING SET) : 0.413 REMARK 3 FREE R VALUE : 0.433 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 774 REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3948 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : NULL ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: INCOMPLETE MODEL, MISSING ATOM REMARK 3 STRUCTURE WAS USED. MODEL IS OF LOW QUALITY DUE TO THE LOW REMARK 3 RESOLUTION, NO FURTHER REFINEMENT WAS POSSIBLE. REMARK 4 REMARK 4 2J42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1290029825. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15486 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ACC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 3 MG/ML IN H2O RESERVOIR: 0.1 REMARK 280 M SODIUM ACETATE PH 4.6, 1.5 M (NH4)2SO4, 5 % ISOPROPANOL, 3 % REMARK 280 ETHANOL, PH 4.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.60000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 52.20000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 114.90000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.20000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 52.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.30000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.20000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.20000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 114.90000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 52.20000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.20000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.30000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.60000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 VAL A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 PHE A 6 REMARK 465 GLU A 7 REMARK 465 ASN A 8 REMARK 465 SER A 9 REMARK 465 VAL A 10 REMARK 465 LYS A 11 REMARK 465 ASN A 12 REMARK 465 SER A 13 REMARK 465 ASN A 14 REMARK 465 LYS A 15 REMARK 465 ASN A 16 REMARK 465 TYR A 17 REMARK 465 LYS A 165 REMARK 465 SER A 166 REMARK 465 LYS A 167 REMARK 465 PHE A 168 REMARK 465 ILE A 169 REMARK 465 PRO A 170 REMARK 465 ASN A 171 REMARK 465 ASN A 172 REMARK 465 THR A 173 REMARK 465 LEU A 174 REMARK 465 PHE A 175 REMARK 465 SER A 176 REMARK 465 ASN A 177 REMARK 465 ALA A 178 REMARK 465 LYS A 179 REMARK 465 LEU A 180 REMARK 465 LYS A 181 REMARK 465 ALA A 182 REMARK 465 ASN A 183 REMARK 465 ALA A 184 REMARK 465 ASN A 185 REMARK 465 THR A 281 REMARK 465 ILE A 282 REMARK 465 THR A 283 REMARK 465 GLY A 284 REMARK 465 ASP A 285 REMARK 465 SER A 286 REMARK 465 THR A 287 REMARK 465 LYS A 288 REMARK 465 SER A 289 REMARK 465 MET A 290 REMARK 465 SER A 291 REMARK 465 LYS A 292 REMARK 465 SER A 309 REMARK 465 GLY A 310 REMARK 465 SER A 311 REMARK 465 LEU A 312 REMARK 465 GLN A 313 REMARK 465 LEU A 314 REMARK 465 ALA A 315 REMARK 465 GLY A 316 REMARK 465 GLY A 317 REMARK 465 ILE A 318 REMARK 465 PHE A 319 REMARK 465 PRO A 320 REMARK 465 VAL A 321 REMARK 465 PHE A 322 REMARK 465 SER A 323 REMARK 465 MET A 324 REMARK 465 GLY A 345 REMARK 465 GLU A 346 REMARK 465 SER A 347 REMARK 465 PHE A 348 REMARK 465 SER A 349 REMARK 465 GLN A 350 REMARK 465 GLY A 351 REMARK 465 LEU A 352 REMARK 465 ASP A 426 REMARK 465 GLN A 427 REMARK 465 PHE A 428 REMARK 465 SER A 429 REMARK 465 SER A 430 REMARK 465 ARG A 431 REMARK 465 ASP A 510 REMARK 465 PRO A 511 REMARK 465 GLU A 512 REMARK 465 ALA A 546 REMARK 465 ASN A 547 REMARK 465 GLN A 548 REMARK 465 PHE A 592 REMARK 465 LYS A 593 REMARK 465 GLU A 594 REMARK 465 ASN A 595 REMARK 465 ILE A 596 REMARK 465 SER A 597 REMARK 465 SER A 598 REMARK 465 ILE A 599 REMARK 465 ASN A 600 REMARK 465 ILE A 601 REMARK 465 ILE A 602 REMARK 465 ASN A 603 REMARK 465 ASP A 604 REMARK 465 THR A 605 REMARK 465 ASN A 606 REMARK 465 PHE A 607 REMARK 465 GLY A 608 REMARK 465 VAL A 609 REMARK 465 GLU A 610 REMARK 465 SER A 611 REMARK 465 MET A 612 REMARK 465 THR A 613 REMARK 465 GLY A 614 REMARK 465 LEU A 615 REMARK 465 SER A 616 REMARK 465 LYS A 617 REMARK 465 ARG A 618 REMARK 465 ILE A 619 REMARK 465 LYS A 620 REMARK 465 GLY A 621 REMARK 465 ASN A 622 REMARK 465 ASP A 623 REMARK 465 GLY A 624 REMARK 465 ILE A 625 REMARK 465 TYR A 626 REMARK 465 ARG A 627 REMARK 465 ALA A 628 REMARK 465 SER A 629 REMARK 465 THR A 630 REMARK 465 LYS A 631 REMARK 465 SER A 632 REMARK 465 PHE A 633 REMARK 465 SER A 634 REMARK 465 PHE A 635 REMARK 465 LYS A 636 REMARK 465 SER A 637 REMARK 465 LYS A 638 REMARK 465 GLU A 639 REMARK 465 ILE A 640 REMARK 465 LYS A 641 REMARK 465 TYR A 642 REMARK 465 PRO A 643 REMARK 465 GLU A 644 REMARK 465 GLY A 645 REMARK 465 PHE A 646 REMARK 465 TYR A 647 REMARK 465 ARG A 648 REMARK 465 MET A 649 REMARK 465 ARG A 650 REMARK 465 PHE A 651 REMARK 465 VAL A 652 REMARK 465 ILE A 653 REMARK 465 GLN A 654 REMARK 465 SER A 655 REMARK 465 TYR A 656 REMARK 465 GLU A 657 REMARK 465 PRO A 658 REMARK 465 PHE A 659 REMARK 465 THR A 660 REMARK 465 CYS A 661 REMARK 465 ASN A 662 REMARK 465 PHE A 663 REMARK 465 LYS A 664 REMARK 465 LEU A 665 REMARK 465 PHE A 666 REMARK 465 ASN A 667 REMARK 465 ASN A 668 REMARK 465 LEU A 669 REMARK 465 ILE A 670 REMARK 465 TYR A 671 REMARK 465 SER A 672 REMARK 465 ASN A 673 REMARK 465 SER A 674 REMARK 465 PHE A 675 REMARK 465 ASP A 676 REMARK 465 ILE A 677 REMARK 465 GLY A 678 REMARK 465 TYR A 679 REMARK 465 TYR A 680 REMARK 465 ASP A 681 REMARK 465 GLU A 682 REMARK 465 PHE A 683 REMARK 465 PHE A 684 REMARK 465 TYR A 685 REMARK 465 PHE A 686 REMARK 465 TYR A 687 REMARK 465 CYS A 688 REMARK 465 ASN A 689 REMARK 465 GLY A 690 REMARK 465 SER A 691 REMARK 465 LYS A 692 REMARK 465 SER A 693 REMARK 465 PHE A 694 REMARK 465 PHE A 695 REMARK 465 ASP A 696 REMARK 465 ILE A 697 REMARK 465 SER A 698 REMARK 465 CYS A 699 REMARK 465 ASP A 700 REMARK 465 ILE A 701 REMARK 465 ILE A 702 REMARK 465 ASN A 703 REMARK 465 SER A 704 REMARK 465 ILE A 705 REMARK 465 ASN A 706 REMARK 465 ARG A 707 REMARK 465 LEU A 708 REMARK 465 SER A 709 REMARK 465 GLY A 710 REMARK 465 VAL A 711 REMARK 465 PHE A 712 REMARK 465 LEU A 713 REMARK 465 ILE A 714 REMARK 465 GLU A 715 REMARK 465 LEU A 716 REMARK 465 ASP A 717 REMARK 465 LYS A 718 REMARK 465 LEU A 719 REMARK 465 ILE A 720 REMARK 465 ILE A 721 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 591 CA C O CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C SER A 85 CD PRO A 86 1.11 REMARK 500 O SER A 85 CD PRO A 86 1.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 86 C - N - CD ANGL. DEV. = -81.9 DEGREES REMARK 500 PRO A 228 C - N - CD ANGL. DEV. = -23.3 DEGREES REMARK 500 PRO A 375 C - N - CD ANGL. DEV. = -25.2 DEGREES REMARK 500 PRO A 418 C - N - CD ANGL. DEV. = -18.8 DEGREES REMARK 500 PRO A 516 C - N - CD ANGL. DEV. = -21.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 3.73 -58.54 REMARK 500 PHE A 32 63.04 -151.71 REMARK 500 PHE A 33 107.87 47.38 REMARK 500 ASN A 34 7.65 -157.55 REMARK 500 LEU A 35 168.94 79.62 REMARK 500 ASN A 36 -46.85 168.57 REMARK 500 ASP A 43 -123.74 -169.03 REMARK 500 PHE A 48 78.10 -159.35 REMARK 500 ASN A 54 25.39 -75.46 REMARK 500 LEU A 57 -145.06 -53.90 REMARK 500 ASN A 59 44.23 -65.21 REMARK 500 ILE A 61 73.47 -59.60 REMARK 500 LYS A 63 -67.35 -100.30 REMARK 500 ARG A 66 98.99 -161.13 REMARK 500 PRO A 73 -171.26 -57.46 REMARK 500 ILE A 75 131.49 -172.52 REMARK 500 ASN A 84 -79.30 -44.22 REMARK 500 SER A 85 -139.48 -146.54 REMARK 500 PRO A 86 138.51 58.33 REMARK 500 GLU A 91 75.01 -115.93 REMARK 500 ASN A 93 73.26 58.55 REMARK 500 PHE A 97 -158.68 -160.44 REMARK 500 ASN A 98 -106.34 81.89 REMARK 500 LEU A 99 -94.15 55.29 REMARK 500 SER A 100 -21.19 -164.94 REMARK 500 LEU A 101 150.03 -46.07 REMARK 500 THR A 103 -72.51 -87.81 REMARK 500 SER A 104 173.59 72.34 REMARK 500 THR A 106 -171.56 61.32 REMARK 500 VAL A 107 123.55 179.73 REMARK 500 ILE A 117 -147.01 -102.30 REMARK 500 ARG A 118 150.93 155.69 REMARK 500 LEU A 122 75.81 -152.11 REMARK 500 ASN A 131 113.45 -15.61 REMARK 500 GLU A 133 -45.47 67.62 REMARK 500 ILE A 144 17.44 -61.88 REMARK 500 ASN A 161 128.79 -23.95 REMARK 500 THR A 162 -179.70 -55.57 REMARK 500 ASN A 163 -141.75 -94.88 REMARK 500 ASP A 187 97.79 -56.90 REMARK 500 ARG A 190 79.58 69.35 REMARK 500 ASP A 191 22.78 -157.53 REMARK 500 ASN A 200 0.31 -67.24 REMARK 500 ASN A 206 52.63 -64.96 REMARK 500 GLN A 207 -42.06 -163.39 REMARK 500 LYS A 208 124.33 78.18 REMARK 500 ASP A 213 -85.14 -14.77 REMARK 500 ASP A 214 -111.76 -50.96 REMARK 500 LYS A 215 -46.50 -13.11 REMARK 500 ALA A 234 -3.22 -48.66 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. DBREF 2J42 A 1 721 UNP O86171 O86171_CLOBO 1 721 SEQADV 2J42 ALA A 357 UNP O86171 GLY 357 CONFLICT SEQADV 2J42 LEU A 494 UNP O86171 PHE 494 CONFLICT SEQADV 2J42 PRO A 495 UNP O86171 SER 495 CONFLICT SEQADV 2J42 ASP A 496 UNP O86171 GLY 496 CONFLICT SEQADV 2J42 ARG A 517 UNP O86171 LYS 517 CONFLICT SEQADV 2J42 ARG A 529 UNP O86171 ALA 529 CONFLICT SEQADV 2J42 MET A 542 UNP O86171 LEU 542 CONFLICT SEQADV 2J42 ARG A 556 UNP O86171 SER 556 CONFLICT SEQADV 2J42 VAL A 560 UNP O86171 ASN 560 CONFLICT SEQADV 2J42 ASN A 571 UNP O86171 ASP 571 CONFLICT SEQADV 2J42 ASN A 576 UNP O86171 HIS 576 CONFLICT SEQRES 1 A 721 MET LEU VAL SER LYS PHE GLU ASN SER VAL LYS ASN SER SEQRES 2 A 721 ASN LYS ASN TYR PHE THR ILE ASN GLY LEU MET GLY TYR SEQRES 3 A 721 TYR PHE GLU ASN ASP PHE PHE ASN LEU ASN ILE ILE SER SEQRES 4 A 721 PRO THR LEU ASP GLY ASN LEU THR PHE SER LYS GLU ASP SEQRES 5 A 721 ILE ASN SER ILE LEU GLY ASN LYS ILE ILE LYS SER ALA SEQRES 6 A 721 ARG TRP ILE GLY LEU ILE LYS PRO SER ILE THR GLY GLU SEQRES 7 A 721 TYR ILE LEU SER THR ASN SER PRO ASN CYS ARG VAL GLU SEQRES 8 A 721 LEU ASN GLY GLU ILE PHE ASN LEU SER LEU ASN THR SER SEQRES 9 A 721 ASN THR VAL ASN LEU ILE GLN GLY ASN VAL TYR ASP ILE SEQRES 10 A 721 ARG ILE GLU GLN LEU MET SER GLU ASN GLN LEU LEU LYS SEQRES 11 A 721 ASN TYR GLU GLY ILE LYS LEU TYR TRP GLU THR SER ASP SEQRES 12 A 721 ILE ILE LYS GLU ILE ILE PRO SER GLU VAL LEU LEU LYS SEQRES 13 A 721 PRO ASN TYR SER ASN THR ASN GLU LYS SER LYS PHE ILE SEQRES 14 A 721 PRO ASN ASN THR LEU PHE SER ASN ALA LYS LEU LYS ALA SEQRES 15 A 721 ASN ALA ASN ARG ASP THR ASP ARG ASP GLY ILE PRO ASP SEQRES 16 A 721 GLU TRP GLU ILE ASN GLY TYR THR VAL MET ASN GLN LYS SEQRES 17 A 721 ALA VAL ALA TRP ASP ASP LYS PHE ALA ALA ASN GLY TYR SEQRES 18 A 721 LYS LYS TYR VAL SER ASN PRO PHE LYS PRO CYS THR ALA SEQRES 19 A 721 ASN ASP PRO TYR THR ASP PHE GLU LYS VAL SER GLY GLN SEQRES 20 A 721 ILE ASP PRO SER VAL SER MET VAL ALA ARG ASP PRO MET SEQRES 21 A 721 ILE SER ALA TYR PRO ILE VAL GLY VAL GLN MET GLU ARG SEQRES 22 A 721 LEU VAL VAL SER LYS SER GLU THR ILE THR GLY ASP SER SEQRES 23 A 721 THR LYS SER MET SER LYS SER THR SER HIS SER SER THR SEQRES 24 A 721 ASN ILE ASN THR VAL GLY ALA GLU VAL SER GLY SER LEU SEQRES 25 A 721 GLN LEU ALA GLY GLY ILE PHE PRO VAL PHE SER MET SER SEQRES 26 A 721 ALA SER ALA ASN TYR SER HIS THR TRP GLN ASN THR SER SEQRES 27 A 721 THR VAL ASP ASP THR THR GLY GLU SER PHE SER GLN GLY SEQRES 28 A 721 LEU SER ILE ASN THR ALA GLU SER ALA TYR ILE ASN PRO SEQRES 29 A 721 ASN ILE ARG TYR TYR ASN THR GLY THR ALA PRO VAL TYR SEQRES 30 A 721 ASN VAL THR PRO THR THR THR ILE VAL ILE ASP LYS GLN SEQRES 31 A 721 SER VAL ALA THR ILE LYS GLY GLN GLU SER LEU ILE GLY SEQRES 32 A 721 ASP TYR LEU ASN PRO GLY GLY THR TYR PRO ILE ILE GLY SEQRES 33 A 721 GLU PRO PRO MET ALA LEU ASN THR MET ASP GLN PHE SER SEQRES 34 A 721 SER ARG LEU ILE PRO ILE ASN TYR ASN GLN LEU LYS SER SEQRES 35 A 721 ILE ASP ASN GLY GLY THR VAL MET LEU SER THR SER GLN SEQRES 36 A 721 PHE THR GLY ASN PHE ALA LYS TYR ASN SER ASN GLY ASN SEQRES 37 A 721 LEU VAL THR ASP GLY ASN ASN TRP GLY PRO TYR LEU GLY SEQRES 38 A 721 THR ILE LYS SER THR THR ALA SER LEU THR LEU SER LEU SEQRES 39 A 721 PRO ASP GLN THR THR GLN VAL ALA VAL VAL ALA PRO ASN SEQRES 40 A 721 PHE SER ASP PRO GLU ASP LYS THR PRO ARG LEU THR LEU SEQRES 41 A 721 GLU GLN ALA LEU VAL LYS ALA PHE ARG LEU GLU LYS LYS SEQRES 42 A 721 ASN GLY LYS PHE TYR PHE HIS GLY MET GLU ILE SER ALA SEQRES 43 A 721 ASN GLN LYS ILE GLN VAL PHE LEU ASP ARG ASN THR ASN SEQRES 44 A 721 VAL ASP PHE GLU ASN GLN LEU LYS ASN THR ALA ASN LYS SEQRES 45 A 721 ASP ILE MET ASN CYS ILE ILE LYS ARG ASN MET ASN ILE SEQRES 46 A 721 LEU VAL LYS VAL ILE THR PHE LYS GLU ASN ILE SER SER SEQRES 47 A 721 ILE ASN ILE ILE ASN ASP THR ASN PHE GLY VAL GLU SER SEQRES 48 A 721 MET THR GLY LEU SER LYS ARG ILE LYS GLY ASN ASP GLY SEQRES 49 A 721 ILE TYR ARG ALA SER THR LYS SER PHE SER PHE LYS SER SEQRES 50 A 721 LYS GLU ILE LYS TYR PRO GLU GLY PHE TYR ARG MET ARG SEQRES 51 A 721 PHE VAL ILE GLN SER TYR GLU PRO PHE THR CYS ASN PHE SEQRES 52 A 721 LYS LEU PHE ASN ASN LEU ILE TYR SER ASN SER PHE ASP SEQRES 53 A 721 ILE GLY TYR TYR ASP GLU PHE PHE TYR PHE TYR CYS ASN SEQRES 54 A 721 GLY SER LYS SER PHE PHE ASP ILE SER CYS ASP ILE ILE SEQRES 55 A 721 ASN SER ILE ASN ARG LEU SER GLY VAL PHE LEU ILE GLU SEQRES 56 A 721 LEU ASP LYS LEU ILE ILE HELIX 1 1 SER A 49 ILE A 53 5 5 HELIX 2 2 PRO A 194 ASN A 200 1 7 HELIX 3 3 TRP A 212 GLY A 220 1 9 HELIX 4 4 THR A 239 GLY A 246 1 8 HELIX 5 5 SER A 253 ASP A 258 5 6 HELIX 6 6 ASN A 436 LYS A 441 1 6 HELIX 7 7 TRP A 476 PRO A 478 5 3 HELIX 8 8 TYR A 479 THR A 486 1 8 HELIX 9 9 THR A 519 LEU A 524 1 6 HELIX 10 10 ASP A 555 ASN A 568 1 14 HELIX 11 11 ALA A 570 ILE A 574 5 5 SHEET 1 AA 2 LEU A 23 MET A 24 0 SHEET 2 AA 2 PRO A 40 THR A 41 -1 O THR A 41 N LEU A 23 SHEET 1 AB 5 ASN A 36 ILE A 37 0 SHEET 2 AB 5 TYR A 27 PHE A 28 -1 O TYR A 27 N ILE A 37 SHEET 3 AB 5 SER A 64 ARG A 66 -1 O SER A 64 N PHE A 28 SHEET 4 AB 5 ILE A 119 LEU A 122 -1 O GLN A 121 N ALA A 65 SHEET 5 AB 5 CYS A 88 VAL A 90 -1 O ARG A 89 N GLU A 120 SHEET 1 AC 3 ASN A 45 LEU A 46 0 SHEET 2 AC 3 ILE A 135 TRP A 139 -1 O ILE A 135 N LEU A 46 SHEET 3 AC 3 LEU A 81 THR A 83 -1 O SER A 82 N TYR A 138 SHEET 1 AD 2 LEU A 70 ILE A 71 0 SHEET 2 AD 2 LEU A 154 LEU A 155 -1 O LEU A 155 N LEU A 70 SHEET 1 AE 2 GLY A 77 TYR A 79 0 SHEET 2 AE 2 VAL A 107 LEU A 109 -1 O VAL A 107 N TYR A 79 SHEET 1 AF 2 TYR A 202 THR A 203 0 SHEET 2 AF 2 ALA A 209 VAL A 210 -1 O ALA A 209 N THR A 203 SHEET 1 AG 4 THR A 294 SER A 297 0 SHEET 2 AG 4 VAL A 269 SER A 277 -1 O LEU A 274 N HIS A 296 SHEET 3 AG 4 TYR A 361 TYR A 369 -1 O TYR A 361 N SER A 277 SHEET 4 AG 4 MET A 420 ALA A 421 -1 O MET A 420 N ILE A 366 SHEET 1 AH 4 THR A 294 SER A 297 0 SHEET 2 AH 4 VAL A 269 SER A 277 -1 O LEU A 274 N HIS A 296 SHEET 3 AH 4 TYR A 361 TYR A 369 -1 O TYR A 361 N SER A 277 SHEET 4 AH 4 THR A 411 TYR A 412 -1 O TYR A 412 N TYR A 368 SHEET 1 AI 3 GLN A 390 ILE A 395 0 SHEET 2 AI 3 THR A 383 ILE A 387 -1 O THR A 383 N ILE A 395 SHEET 3 AI 3 MET A 450 LEU A 451 -1 O MET A 450 N VAL A 386 SHEET 1 AJ 2 ALA A 461 TYR A 463 0 SHEET 2 AJ 2 VAL A 470 ASP A 472 -1 O THR A 471 N LYS A 462 SHEET 1 AK 2 THR A 487 ALA A 488 0 SHEET 2 AK 2 VAL A 503 VAL A 504 -1 O VAL A 503 N ALA A 488 CISPEP 1 TYR A 412 PRO A 413 0 -0.87 CRYST1 104.400 104.400 153.200 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009579 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006527 0.00000