HEADER CARBOHYDRATE-BINDING MODULE 24-AUG-06 2J44 TITLE ALPHA-GLUCAN BINDING BY A STREPTOCOCCAL VIRULENCE FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKALINE AMYLOPULLULANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CARBOHYDRATE-BINDING MODULE, RESIDUES 135-312,314,316-353; COMPND 5 SYNONYM: SPNDX; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: TANDEM FAMILY 41 CARBOHYDRATE BINDING MODULES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS VIRULENCE, PULLULANASE, GLYCOGEN BINDING, STREPTOCOCCUS PNEUMONIAE, KEYWDS 2 CARBOHYDRATE-BINDING MODULE EXPDTA X-RAY DIFFRACTION AUTHOR A.LAMMERTS VAN BUEREN,M.HIGGINS,D.WANG,R.D.BURKE,A.B.BORASTON REVDAT 5 13-DEC-23 2J44 1 HETSYN REVDAT 4 29-JUL-20 2J44 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 24-FEB-09 2J44 1 VERSN REVDAT 2 29-APR-08 2J44 1 VERSN JRNL REMARK REVDAT 1 11-DEC-06 2J44 0 JRNL AUTH A.LAMMERTS VAN BUEREN,M.HIGGINS,D.WANG,R.D.BURKE, JRNL AUTH 2 A.B.BORASTON JRNL TITL IDENTIFICATION AND STRUCTURAL BASIS OF BINDING TO HOST LUNG JRNL TITL 2 GLYCOGEN BY STREPTOCOCCAL VIRULENCE FACTORS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 14 76 2007 JRNL REFN ISSN 1545-9993 JRNL PMID 17187076 JRNL DOI 10.1038/NSMB1187 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 15070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 802 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1083 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 187 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.99000 REMARK 3 B22 (A**2) : 0.41000 REMARK 3 B33 (A**2) : 0.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.484 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1937 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2635 ; 1.554 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 218 ; 8.558 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 284 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1453 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 952 ; 0.234 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 164 ; 0.209 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.329 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.170 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1083 ; 1.058 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1745 ; 1.890 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 854 ; 2.437 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 889 ; 3.816 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2J44 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1290029835. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 113.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15873 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 19.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.31 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SPYD REMARK 200 STARTING MODEL: PDB ENTRY 2J43 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 25.27750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.56200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.27750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.56200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 113 O HOH A 2105 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 60 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 126 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 209 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 8 68.47 79.64 REMARK 500 ASP A 31 -130.90 66.01 REMARK 500 ASP A 32 39.33 -78.96 REMARK 500 ASN A 39 64.31 63.95 REMARK 500 ALA A 79 118.48 -173.46 REMARK 500 ASN A 128 79.35 103.75 REMARK 500 TYR A 129 -64.13 93.96 REMARK 500 SER A 145 87.97 -169.44 REMARK 500 ALA A 146 -119.04 160.96 REMARK 500 GLN A 147 86.83 65.83 REMARK 500 TRP A 148 135.03 -35.87 REMARK 500 PRO A 149 59.92 -109.30 REMARK 500 ASN A 169 154.28 88.31 REMARK 500 GLU A 170 -153.47 56.71 REMARK 500 ILE A 189 -61.04 53.54 REMARK 500 THR A 197 -110.83 -91.59 REMARK 500 ASP A 198 32.06 5.35 REMARK 500 HIS A 202 -88.16 -134.97 REMARK 500 SER A 203 -33.80 107.51 REMARK 500 ASP A 209 -123.73 48.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 126 GLY A 127 144.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1225 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 60 OD2 REMARK 620 2 HIS A 222 ND1 111.6 REMARK 620 3 HOH A2177 O 103.4 110.9 REMARK 620 4 HOH A2178 O 98.9 100.4 130.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1226 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 153 OD1 REMARK 620 2 HOH A2179 O 89.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1224 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 198 OD2 REMARK 620 2 HIS A 202 NE2 82.9 REMARK 620 N 1 DBREF 2J44 A 7 184 UNP Q97SQ7 Q97SQ7_STRPN 135 312 DBREF 2J44 A 185 185 UNP Q97SQ7 Q97SQ7_STRPN 314 314 DBREF 2J44 A 186 223 UNP Q97SQ7 Q97SQ7_STRPN 316 353 SEQRES 1 A 217 ASP ASN TYR PHE ARG ILE HIS VAL LYS LYS LEU PRO GLU SEQRES 2 A 217 GLU ASN LYS ASP ALA GLN GLY LEU TRP THR TRP ASP ASP SEQRES 3 A 217 VAL GLU LYS PRO SER GLU ASN TRP PRO ASN GLY ALA LEU SEQRES 4 A 217 SER PHE LYS ASP ALA LYS LYS ASP ASP TYR GLY TYR TYR SEQRES 5 A 217 LEU ASP VAL LYS LEU LYS GLY GLU GLN ALA LYS LYS ILE SEQRES 6 A 217 SER PHE LEU ILE ASN ASN THR ALA GLY LYS ASN LEU THR SEQRES 7 A 217 GLY ASP LYS SER VAL GLU LYS LEU VAL PRO LYS MET ASN SEQRES 8 A 217 GLU ALA TRP LEU ASP GLN ASP TYR LYS VAL PHE SER TYR SEQRES 9 A 217 GLU PRO GLN PRO ALA GLY THR VAL ARG VAL ASN TYR TYR SEQRES 10 A 217 ARG THR ASP GLY ASN TYR ASP LYS LYS SER LEU TRP TYR SEQRES 11 A 217 TRP GLY ASP VAL LYS ASN PRO SER SER ALA GLN TRP PRO SEQRES 12 A 217 ASP GLY THR ASP PHE THR ALA THR GLY LYS TYR GLY ARG SEQRES 13 A 217 TYR ILE ASP ILE PRO LEU ASN GLU ALA ALA ARG GLU PHE SEQRES 14 A 217 GLY PHE LEU LEU LEU ASP GLU SER LYS GLY ASP VAL LYS SEQRES 15 A 217 ILE ARG LYS GLU ASN TYR LYS PHE THR ASP LEU LYS ASN SEQRES 16 A 217 HIS SER GLN ILE PHE LEU LYS ASP ASP ASP GLU SER ILE SEQRES 17 A 217 TYR THR ASN PRO TYR TYR VAL HIS ASP HET GLC B 1 12 HET GLC B 2 11 HET GLC B 3 11 HET GLC C 1 12 HET GLC C 2 11 HET GLC C 3 11 HET GLC C 4 11 HET ZN A1224 1 HET ZN A1225 1 HET ZN A1226 1 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM ZN ZINC ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 GLC 7(C6 H12 O6) FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *187(H2 O) HELIX 1 1 ASN A 21 ASP A 23 5 3 HELIX 2 2 LYS A 48 ALA A 50 5 3 SHEET 1 AA 5 LYS A 51 LYS A 52 0 SHEET 2 AA 5 TYR A 57 LYS A 62 -1 O TYR A 58 N LYS A 51 SHEET 3 AA 5 TYR A 9 VAL A 14 -1 O PHE A 10 N VAL A 61 SHEET 4 AA 5 GLU A 98 LEU A 101 1 O ALA A 99 N HIS A 13 SHEET 5 AA 5 VAL A 107 PHE A 108 -1 O PHE A 108 N TRP A 100 SHEET 1 AB 4 LEU A 45 SER A 46 0 SHEET 2 AB 4 GLN A 25 ASP A 31 -1 O LEU A 27 N LEU A 45 SHEET 3 AB 4 LYS A 70 ASN A 77 -1 O SER A 72 N TRP A 30 SHEET 4 AB 4 LYS A 87 GLU A 90 -1 O LYS A 87 N PHE A 73 SHEET 1 AC 4 ALA A 156 GLY A 158 0 SHEET 2 AC 4 GLY A 161 PRO A 167 -1 O GLY A 161 N GLY A 158 SHEET 3 AC 4 THR A 117 TYR A 123 -1 O VAL A 118 N ILE A 166 SHEET 4 AC 4 GLN A 204 LYS A 208 1 O ILE A 205 N ASN A 121 SHEET 1 AD 4 THR A 152 ASP A 153 0 SHEET 2 AD 4 LYS A 132 TRP A 137 -1 O LEU A 134 N THR A 152 SHEET 3 AD 4 PHE A 175 ASP A 181 -1 O GLY A 176 N TRP A 137 SHEET 4 AD 4 TYR A 194 PHE A 196 -1 O TYR A 194 N PHE A 177 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.45 LINK O4 GLC B 2 C1 GLC B 3 1555 1555 1.44 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.44 LINK O4 GLC C 2 C1 GLC C 3 1555 1555 1.44 LINK O4 GLC C 3 C1 GLC C 4 1555 1555 1.45 LINK OD2 ASP A 60 ZN ZN A1225 1555 1555 1.90 LINK OD1 ASP A 153 ZN ZN A1226 1555 1555 2.19 LINK OD2 ASP A 198 ZN ZN A1224 1555 1555 2.33 LINK NE2 HIS A 202 ZN ZN A1224 1555 1555 2.35 LINK ND1 HIS A 222 ZN ZN A1225 4444 1555 2.27 LINK ZN ZN A1225 O HOH A2177 1555 1555 2.24 LINK ZN ZN A1225 O HOH A2178 1555 1555 2.61 LINK ZN ZN A1226 O HOH A2179 1555 1555 2.23 CISPEP 1 TRP A 40 PRO A 41 0 -4.47 CISPEP 2 GLY A 65 GLU A 66 0 -0.01 CISPEP 3 GLU A 66 GLN A 67 0 -1.19 CISPEP 4 ALA A 79 GLY A 80 0 -16.79 CISPEP 5 GLY A 127 ASN A 128 0 -0.48 CISPEP 6 ASN A 128 TYR A 129 0 1.08 CISPEP 7 ASP A 130 LYS A 131 0 26.98 CISPEP 8 SER A 145 ALA A 146 0 2.38 CISPEP 9 TRP A 148 PRO A 149 0 -0.26 CISPEP 10 ASP A 150 GLY A 151 0 15.92 CRYST1 50.555 89.124 59.997 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019780 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016667 0.00000