data_2J9U # _entry.id 2J9U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2J9U pdb_00002j9u 10.2210/pdb2j9u/pdb PDBE EBI-28841 ? ? WWPDB D_1290028841 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ncs_dom_lim 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 2 3 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 3 3 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 4 3 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_database_status.status_code_sf' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.value' 13 4 'Structure model' '_struct_conn.pdbx_dist_value' 14 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 26 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 27 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 28 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 29 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 30 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 31 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 32 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 33 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 34 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2J9U _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-11-16 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CAZ unspecified 'ESCRT-I CORE' PDB 2G3K unspecified 'CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF VPS28' PDB 1U5T unspecified 'STRUCTURE OF THE ESCRT-II ENDOSOMAL TRAFFICKING COMPLEX' PDB 1W7P unspecified ESCRT-II PDB 2CAY unspecified 'VPS36 N-TERMINAL PH DOMAIN' PDB 2J9V unspecified '2 ANGSTROM X-RAY STRUCTURE OF THE YEAST ESCRT-I VPS28 C-TERMINUS' PDB 2J9W unspecified 'STRUCTURAL INSIGHT INTO THE ESCRT-I-II LINK AND ITS ROLE IN MVB TRAFFICKING' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gill, D.J.' 1 'Teo, H.L.' 2 'Sun, J.' 3 'Perisic, O.' 4 'Veprintsev, D.B.' 5 'Emr, S.D.' 6 'Williams, R.L.' 7 # _citation.id primary _citation.title 'Structural Insight Into the Escrt-I/-II Link and its Role in Mvb Trafficking.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 26 _citation.page_first 600 _citation.page_last ? _citation.year 2007 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17215868 _citation.pdbx_database_id_DOI 10.1038/SJ.EMBOJ.7601501 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gill, D.J.' 1 ? primary 'Teo, H.L.' 2 ? primary 'Sun, J.' 3 ? primary 'Perisic, O.' 4 ? primary 'Veprintsev, D.B.' 5 ? primary 'Emr, S.D.' 6 ? primary 'Williams, R.L.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28' 11151.820 2 ? ? 'RESIDUES 148-242' ? 2 polymer man 'VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36' 8315.310 2 ? ? 'RESIDUES 110-176' ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 water nat water 18.015 51 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 VPS28 2 VPS36 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVTRDDFENRSKLIDWIVRINKLSIGDTLTETQIREL LFDLELAYKSFYALLD ; ;MFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVTRDDFENRSKLIDWIVRINKLSIGDTLTETQIREL LFDLELAYKSFYALLD ; A,C ? 2 'polypeptide(L)' no no MAHHHHHHMASADVVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPRNQFG MAHHHHHHMASADVVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPRNQFG B,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PHE n 1 3 ASN n 1 4 ALA n 1 5 LYS n 1 6 TYR n 1 7 VAL n 1 8 ALA n 1 9 GLU n 1 10 ALA n 1 11 THR n 1 12 GLY n 1 13 ASN n 1 14 PHE n 1 15 ILE n 1 16 THR n 1 17 VAL n 1 18 MET n 1 19 ASP n 1 20 ALA n 1 21 LEU n 1 22 LYS n 1 23 LEU n 1 24 ASN n 1 25 TYR n 1 26 ASN n 1 27 ALA n 1 28 LYS n 1 29 ASP n 1 30 GLN n 1 31 LEU n 1 32 HIS n 1 33 PRO n 1 34 LEU n 1 35 LEU n 1 36 ALA n 1 37 GLU n 1 38 LEU n 1 39 LEU n 1 40 ILE n 1 41 SER n 1 42 ILE n 1 43 ASN n 1 44 ARG n 1 45 VAL n 1 46 THR n 1 47 ARG n 1 48 ASP n 1 49 ASP n 1 50 PHE n 1 51 GLU n 1 52 ASN n 1 53 ARG n 1 54 SER n 1 55 LYS n 1 56 LEU n 1 57 ILE n 1 58 ASP n 1 59 TRP n 1 60 ILE n 1 61 VAL n 1 62 ARG n 1 63 ILE n 1 64 ASN n 1 65 LYS n 1 66 LEU n 1 67 SER n 1 68 ILE n 1 69 GLY n 1 70 ASP n 1 71 THR n 1 72 LEU n 1 73 THR n 1 74 GLU n 1 75 THR n 1 76 GLN n 1 77 ILE n 1 78 ARG n 1 79 GLU n 1 80 LEU n 1 81 LEU n 1 82 PHE n 1 83 ASP n 1 84 LEU n 1 85 GLU n 1 86 LEU n 1 87 ALA n 1 88 TYR n 1 89 LYS n 1 90 SER n 1 91 PHE n 1 92 TYR n 1 93 ALA n 1 94 LEU n 1 95 LEU n 1 96 ASP n 2 1 MET n 2 2 ALA n 2 3 HIS n 2 4 HIS n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 MET n 2 10 ALA n 2 11 SER n 2 12 ALA n 2 13 ASP n 2 14 VAL n 2 15 VAL n 2 16 SER n 2 17 THR n 2 18 TRP n 2 19 VAL n 2 20 CYS n 2 21 PRO n 2 22 ILE n 2 23 CYS n 2 24 MET n 2 25 VAL n 2 26 SER n 2 27 ASN n 2 28 GLU n 2 29 THR n 2 30 GLN n 2 31 GLY n 2 32 GLU n 2 33 PHE n 2 34 THR n 2 35 LYS n 2 36 ASP n 2 37 THR n 2 38 LEU n 2 39 PRO n 2 40 THR n 2 41 PRO n 2 42 ILE n 2 43 CYS n 2 44 ILE n 2 45 ASN n 2 46 CYS n 2 47 GLY n 2 48 VAL n 2 49 PRO n 2 50 ALA n 2 51 ASP n 2 52 TYR n 2 53 GLU n 2 54 LEU n 2 55 THR n 2 56 LYS n 2 57 SER n 2 58 SER n 2 59 ILE n 2 60 ASN n 2 61 CYS n 2 62 SER n 2 63 ASN n 2 64 ALA n 2 65 ILE n 2 66 ASP n 2 67 PRO n 2 68 ASN n 2 69 ALA n 2 70 ASN n 2 71 PRO n 2 72 ARG n 2 73 ASN n 2 74 GLN n 2 75 PHE n 2 76 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ;BAKER'S YEAST ; ? ? ? ? ? ? ? ? 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI BL21(DE3)' 469008 ? ? ? ? ? ? ? C41 ? ? ? ? ? ? ? ? ? ? POPC ? ? 2 1 sample ? ? ? ;BAKER'S YEAST ; ? ? ? ? ? ? ? ? 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI BL21(DE3)' 469008 ? ? ? ? ? ? ? C41 ? ? ? ? ? ? ? ? ? ? POPC ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 147 ? ? ? A . n A 1 2 PHE 2 148 148 PHE PHE A . n A 1 3 ASN 3 149 149 ASN ASN A . n A 1 4 ALA 4 150 150 ALA ALA A . n A 1 5 LYS 5 151 151 LYS LYS A . n A 1 6 TYR 6 152 152 TYR TYR A . n A 1 7 VAL 7 153 153 VAL VAL A . n A 1 8 ALA 8 154 154 ALA ALA A . n A 1 9 GLU 9 155 155 GLU GLU A . n A 1 10 ALA 10 156 156 ALA ALA A . n A 1 11 THR 11 157 157 THR THR A . n A 1 12 GLY 12 158 158 GLY GLY A . n A 1 13 ASN 13 159 159 ASN ASN A . n A 1 14 PHE 14 160 160 PHE PHE A . n A 1 15 ILE 15 161 161 ILE ILE A . n A 1 16 THR 16 162 162 THR THR A . n A 1 17 VAL 17 163 163 VAL VAL A . n A 1 18 MET 18 164 164 MET MET A . n A 1 19 ASP 19 165 165 ASP ASP A . n A 1 20 ALA 20 166 166 ALA ALA A . n A 1 21 LEU 21 167 167 LEU LEU A . n A 1 22 LYS 22 168 168 LYS LYS A . n A 1 23 LEU 23 169 169 LEU LEU A . n A 1 24 ASN 24 170 170 ASN ASN A . n A 1 25 TYR 25 171 171 TYR TYR A . n A 1 26 ASN 26 172 172 ASN ASN A . n A 1 27 ALA 27 173 173 ALA ALA A . n A 1 28 LYS 28 174 174 LYS LYS A . n A 1 29 ASP 29 175 175 ASP ASP A . n A 1 30 GLN 30 176 176 GLN GLN A . n A 1 31 LEU 31 177 177 LEU LEU A . n A 1 32 HIS 32 178 178 HIS HIS A . n A 1 33 PRO 33 179 179 PRO PRO A . n A 1 34 LEU 34 180 180 LEU LEU A . n A 1 35 LEU 35 181 181 LEU LEU A . n A 1 36 ALA 36 182 182 ALA ALA A . n A 1 37 GLU 37 183 183 GLU GLU A . n A 1 38 LEU 38 184 184 LEU LEU A . n A 1 39 LEU 39 185 185 LEU LEU A . n A 1 40 ILE 40 186 186 ILE ILE A . n A 1 41 SER 41 187 187 SER SER A . n A 1 42 ILE 42 188 188 ILE ILE A . n A 1 43 ASN 43 189 189 ASN ASN A . n A 1 44 ARG 44 190 190 ARG ARG A . n A 1 45 VAL 45 191 191 VAL VAL A . n A 1 46 THR 46 192 192 THR THR A . n A 1 47 ARG 47 193 193 ARG ARG A . n A 1 48 ASP 48 194 194 ASP ASP A . n A 1 49 ASP 49 195 195 ASP ASP A . n A 1 50 PHE 50 196 196 PHE PHE A . n A 1 51 GLU 51 197 197 GLU GLU A . n A 1 52 ASN 52 198 198 ASN ASN A . n A 1 53 ARG 53 199 199 ARG ARG A . n A 1 54 SER 54 200 200 SER SER A . n A 1 55 LYS 55 201 201 LYS LYS A . n A 1 56 LEU 56 202 202 LEU LEU A . n A 1 57 ILE 57 203 203 ILE ILE A . n A 1 58 ASP 58 204 204 ASP ASP A . n A 1 59 TRP 59 205 205 TRP TRP A . n A 1 60 ILE 60 206 206 ILE ILE A . n A 1 61 VAL 61 207 207 VAL VAL A . n A 1 62 ARG 62 208 208 ARG ARG A . n A 1 63 ILE 63 209 209 ILE ILE A . n A 1 64 ASN 64 210 210 ASN ASN A . n A 1 65 LYS 65 211 211 LYS LYS A . n A 1 66 LEU 66 212 212 LEU LEU A . n A 1 67 SER 67 213 213 SER SER A . n A 1 68 ILE 68 214 214 ILE ILE A . n A 1 69 GLY 69 215 215 GLY GLY A . n A 1 70 ASP 70 216 216 ASP ASP A . n A 1 71 THR 71 217 217 THR THR A . n A 1 72 LEU 72 218 218 LEU LEU A . n A 1 73 THR 73 219 219 THR THR A . n A 1 74 GLU 74 220 220 GLU GLU A . n A 1 75 THR 75 221 221 THR THR A . n A 1 76 GLN 76 222 222 GLN GLN A . n A 1 77 ILE 77 223 223 ILE ILE A . n A 1 78 ARG 78 224 224 ARG ARG A . n A 1 79 GLU 79 225 225 GLU GLU A . n A 1 80 LEU 80 226 226 LEU LEU A . n A 1 81 LEU 81 227 227 LEU LEU A . n A 1 82 PHE 82 228 228 PHE PHE A . n A 1 83 ASP 83 229 229 ASP ASP A . n A 1 84 LEU 84 230 230 LEU LEU A . n A 1 85 GLU 85 231 231 GLU GLU A . n A 1 86 LEU 86 232 232 LEU LEU A . n A 1 87 ALA 87 233 233 ALA ALA A . n A 1 88 TYR 88 234 234 TYR TYR A . n A 1 89 LYS 89 235 235 LYS LYS A . n A 1 90 SER 90 236 236 SER SER A . n A 1 91 PHE 91 237 237 PHE PHE A . n A 1 92 TYR 92 238 238 TYR TYR A . n A 1 93 ALA 93 239 239 ALA ALA A . n A 1 94 LEU 94 240 240 LEU LEU A . n A 1 95 LEU 95 241 241 LEU LEU A . n A 1 96 ASP 96 242 ? ? ? A . n B 2 1 MET 1 101 ? ? ? B . n B 2 2 ALA 2 102 ? ? ? B . n B 2 3 HIS 3 103 ? ? ? B . n B 2 4 HIS 4 104 ? ? ? B . n B 2 5 HIS 5 105 ? ? ? B . n B 2 6 HIS 6 106 ? ? ? B . n B 2 7 HIS 7 107 ? ? ? B . n B 2 8 HIS 8 108 ? ? ? B . n B 2 9 MET 9 109 ? ? ? B . n B 2 10 ALA 10 110 ? ? ? B . n B 2 11 SER 11 111 ? ? ? B . n B 2 12 ALA 12 112 ? ? ? B . n B 2 13 ASP 13 113 ? ? ? B . n B 2 14 VAL 14 114 ? ? ? B . n B 2 15 VAL 15 115 115 VAL VAL B . n B 2 16 SER 16 116 116 SER SER B . n B 2 17 THR 17 117 117 THR THR B . n B 2 18 TRP 18 118 118 TRP TRP B . n B 2 19 VAL 19 119 119 VAL VAL B . n B 2 20 CYS 20 120 120 CYS CYS B . n B 2 21 PRO 21 121 121 PRO PRO B . n B 2 22 ILE 22 122 122 ILE ILE B . n B 2 23 CYS 23 123 123 CYS CYS B . n B 2 24 MET 24 124 124 MET MET B . n B 2 25 VAL 25 125 125 VAL VAL B . n B 2 26 SER 26 126 126 SER SER B . n B 2 27 ASN 27 127 127 ASN ASN B . n B 2 28 GLU 28 128 128 GLU GLU B . n B 2 29 THR 29 129 129 THR THR B . n B 2 30 GLN 30 130 130 GLN GLN B . n B 2 31 GLY 31 131 131 GLY GLY B . n B 2 32 GLU 32 132 132 GLU GLU B . n B 2 33 PHE 33 133 133 PHE PHE B . n B 2 34 THR 34 134 134 THR THR B . n B 2 35 LYS 35 135 135 LYS LYS B . n B 2 36 ASP 36 136 136 ASP ASP B . n B 2 37 THR 37 137 137 THR THR B . n B 2 38 LEU 38 138 138 LEU LEU B . n B 2 39 PRO 39 139 139 PRO PRO B . n B 2 40 THR 40 140 140 THR THR B . n B 2 41 PRO 41 141 141 PRO PRO B . n B 2 42 ILE 42 142 142 ILE ILE B . n B 2 43 CYS 43 143 143 CYS CYS B . n B 2 44 ILE 44 144 144 ILE ILE B . n B 2 45 ASN 45 145 145 ASN ASN B . n B 2 46 CYS 46 146 146 CYS CYS B . n B 2 47 GLY 47 147 147 GLY GLY B . n B 2 48 VAL 48 148 148 VAL VAL B . n B 2 49 PRO 49 149 149 PRO PRO B . n B 2 50 ALA 50 150 150 ALA ALA B . n B 2 51 ASP 51 151 151 ASP ASP B . n B 2 52 TYR 52 152 152 TYR TYR B . n B 2 53 GLU 53 153 153 GLU GLU B . n B 2 54 LEU 54 154 154 LEU LEU B . n B 2 55 THR 55 155 155 THR THR B . n B 2 56 LYS 56 156 156 LYS LYS B . n B 2 57 SER 57 157 157 SER SER B . n B 2 58 SER 58 158 158 SER SER B . n B 2 59 ILE 59 159 159 ILE ILE B . n B 2 60 ASN 60 160 160 ASN ASN B . n B 2 61 CYS 61 161 161 CYS CYS B . n B 2 62 SER 62 162 ? ? ? B . n B 2 63 ASN 63 163 ? ? ? B . n B 2 64 ALA 64 164 ? ? ? B . n B 2 65 ILE 65 165 ? ? ? B . n B 2 66 ASP 66 166 ? ? ? B . n B 2 67 PRO 67 167 ? ? ? B . n B 2 68 ASN 68 168 ? ? ? B . n B 2 69 ALA 69 169 ? ? ? B . n B 2 70 ASN 70 170 ? ? ? B . n B 2 71 PRO 71 171 ? ? ? B . n B 2 72 ARG 72 172 ? ? ? B . n B 2 73 ASN 73 173 ? ? ? B . n B 2 74 GLN 74 174 ? ? ? B . n B 2 75 PHE 75 175 ? ? ? B . n B 2 76 GLY 76 176 ? ? ? B . n C 1 1 MET 1 147 ? ? ? C . n C 1 2 PHE 2 148 148 PHE PHE C . n C 1 3 ASN 3 149 149 ASN ASN C . n C 1 4 ALA 4 150 150 ALA ALA C . n C 1 5 LYS 5 151 151 LYS LYS C . n C 1 6 TYR 6 152 152 TYR TYR C . n C 1 7 VAL 7 153 153 VAL VAL C . n C 1 8 ALA 8 154 154 ALA ALA C . n C 1 9 GLU 9 155 155 GLU GLU C . n C 1 10 ALA 10 156 156 ALA ALA C . n C 1 11 THR 11 157 157 THR THR C . n C 1 12 GLY 12 158 158 GLY GLY C . n C 1 13 ASN 13 159 159 ASN ASN C . n C 1 14 PHE 14 160 160 PHE PHE C . n C 1 15 ILE 15 161 161 ILE ILE C . n C 1 16 THR 16 162 162 THR THR C . n C 1 17 VAL 17 163 163 VAL VAL C . n C 1 18 MET 18 164 164 MET MET C . n C 1 19 ASP 19 165 165 ASP ASP C . n C 1 20 ALA 20 166 166 ALA ALA C . n C 1 21 LEU 21 167 167 LEU LEU C . n C 1 22 LYS 22 168 168 LYS LYS C . n C 1 23 LEU 23 169 169 LEU LEU C . n C 1 24 ASN 24 170 170 ASN ASN C . n C 1 25 TYR 25 171 171 TYR TYR C . n C 1 26 ASN 26 172 172 ASN ASN C . n C 1 27 ALA 27 173 173 ALA ALA C . n C 1 28 LYS 28 174 174 LYS LYS C . n C 1 29 ASP 29 175 175 ASP ASP C . n C 1 30 GLN 30 176 176 GLN GLN C . n C 1 31 LEU 31 177 177 LEU LEU C . n C 1 32 HIS 32 178 178 HIS HIS C . n C 1 33 PRO 33 179 179 PRO PRO C . n C 1 34 LEU 34 180 180 LEU LEU C . n C 1 35 LEU 35 181 181 LEU LEU C . n C 1 36 ALA 36 182 182 ALA ALA C . n C 1 37 GLU 37 183 183 GLU GLU C . n C 1 38 LEU 38 184 184 LEU LEU C . n C 1 39 LEU 39 185 185 LEU LEU C . n C 1 40 ILE 40 186 186 ILE ILE C . n C 1 41 SER 41 187 187 SER SER C . n C 1 42 ILE 42 188 188 ILE ILE C . n C 1 43 ASN 43 189 189 ASN ASN C . n C 1 44 ARG 44 190 190 ARG ARG C . n C 1 45 VAL 45 191 191 VAL VAL C . n C 1 46 THR 46 192 192 THR THR C . n C 1 47 ARG 47 193 193 ARG ARG C . n C 1 48 ASP 48 194 194 ASP ASP C . n C 1 49 ASP 49 195 195 ASP ASP C . n C 1 50 PHE 50 196 196 PHE PHE C . n C 1 51 GLU 51 197 197 GLU GLU C . n C 1 52 ASN 52 198 198 ASN ASN C . n C 1 53 ARG 53 199 199 ARG ARG C . n C 1 54 SER 54 200 200 SER SER C . n C 1 55 LYS 55 201 201 LYS LYS C . n C 1 56 LEU 56 202 202 LEU LEU C . n C 1 57 ILE 57 203 203 ILE ILE C . n C 1 58 ASP 58 204 204 ASP ASP C . n C 1 59 TRP 59 205 205 TRP TRP C . n C 1 60 ILE 60 206 206 ILE ILE C . n C 1 61 VAL 61 207 207 VAL VAL C . n C 1 62 ARG 62 208 208 ARG ARG C . n C 1 63 ILE 63 209 209 ILE ILE C . n C 1 64 ASN 64 210 210 ASN ASN C . n C 1 65 LYS 65 211 211 LYS LYS C . n C 1 66 LEU 66 212 212 LEU LEU C . n C 1 67 SER 67 213 213 SER SER C . n C 1 68 ILE 68 214 214 ILE ILE C . n C 1 69 GLY 69 215 215 GLY GLY C . n C 1 70 ASP 70 216 216 ASP ASP C . n C 1 71 THR 71 217 217 THR THR C . n C 1 72 LEU 72 218 218 LEU LEU C . n C 1 73 THR 73 219 219 THR THR C . n C 1 74 GLU 74 220 220 GLU GLU C . n C 1 75 THR 75 221 221 THR THR C . n C 1 76 GLN 76 222 222 GLN GLN C . n C 1 77 ILE 77 223 223 ILE ILE C . n C 1 78 ARG 78 224 224 ARG ARG C . n C 1 79 GLU 79 225 225 GLU GLU C . n C 1 80 LEU 80 226 226 LEU LEU C . n C 1 81 LEU 81 227 227 LEU LEU C . n C 1 82 PHE 82 228 228 PHE PHE C . n C 1 83 ASP 83 229 229 ASP ASP C . n C 1 84 LEU 84 230 230 LEU LEU C . n C 1 85 GLU 85 231 231 GLU GLU C . n C 1 86 LEU 86 232 232 LEU LEU C . n C 1 87 ALA 87 233 233 ALA ALA C . n C 1 88 TYR 88 234 234 TYR TYR C . n C 1 89 LYS 89 235 235 LYS LYS C . n C 1 90 SER 90 236 236 SER SER C . n C 1 91 PHE 91 237 237 PHE PHE C . n C 1 92 TYR 92 238 238 TYR TYR C . n C 1 93 ALA 93 239 239 ALA ALA C . n C 1 94 LEU 94 240 240 LEU LEU C . n C 1 95 LEU 95 241 241 LEU LEU C . n C 1 96 ASP 96 242 ? ? ? C . n D 2 1 MET 1 101 ? ? ? D . n D 2 2 ALA 2 102 ? ? ? D . n D 2 3 HIS 3 103 ? ? ? D . n D 2 4 HIS 4 104 ? ? ? D . n D 2 5 HIS 5 105 ? ? ? D . n D 2 6 HIS 6 106 ? ? ? D . n D 2 7 HIS 7 107 ? ? ? D . n D 2 8 HIS 8 108 ? ? ? D . n D 2 9 MET 9 109 ? ? ? D . n D 2 10 ALA 10 110 ? ? ? D . n D 2 11 SER 11 111 ? ? ? D . n D 2 12 ALA 12 112 ? ? ? D . n D 2 13 ASP 13 113 ? ? ? D . n D 2 14 VAL 14 114 ? ? ? D . n D 2 15 VAL 15 115 115 VAL VAL D . n D 2 16 SER 16 116 116 SER SER D . n D 2 17 THR 17 117 117 THR THR D . n D 2 18 TRP 18 118 118 TRP TRP D . n D 2 19 VAL 19 119 119 VAL VAL D . n D 2 20 CYS 20 120 120 CYS CYS D . n D 2 21 PRO 21 121 121 PRO PRO D . n D 2 22 ILE 22 122 122 ILE ILE D . n D 2 23 CYS 23 123 123 CYS CYS D . n D 2 24 MET 24 124 124 MET MET D . n D 2 25 VAL 25 125 125 VAL VAL D . n D 2 26 SER 26 126 126 SER SER D . n D 2 27 ASN 27 127 127 ASN ASN D . n D 2 28 GLU 28 128 128 GLU GLU D . n D 2 29 THR 29 129 129 THR THR D . n D 2 30 GLN 30 130 130 GLN GLN D . n D 2 31 GLY 31 131 131 GLY GLY D . n D 2 32 GLU 32 132 132 GLU GLU D . n D 2 33 PHE 33 133 133 PHE PHE D . n D 2 34 THR 34 134 134 THR THR D . n D 2 35 LYS 35 135 135 LYS LYS D . n D 2 36 ASP 36 136 136 ASP ASP D . n D 2 37 THR 37 137 137 THR THR D . n D 2 38 LEU 38 138 138 LEU LEU D . n D 2 39 PRO 39 139 139 PRO PRO D . n D 2 40 THR 40 140 140 THR THR D . n D 2 41 PRO 41 141 141 PRO PRO D . n D 2 42 ILE 42 142 142 ILE ILE D . n D 2 43 CYS 43 143 143 CYS CYS D . n D 2 44 ILE 44 144 144 ILE ILE D . n D 2 45 ASN 45 145 145 ASN ASN D . n D 2 46 CYS 46 146 146 CYS CYS D . n D 2 47 GLY 47 147 147 GLY GLY D . n D 2 48 VAL 48 148 148 VAL VAL D . n D 2 49 PRO 49 149 149 PRO PRO D . n D 2 50 ALA 50 150 150 ALA ALA D . n D 2 51 ASP 51 151 151 ASP ASP D . n D 2 52 TYR 52 152 152 TYR TYR D . n D 2 53 GLU 53 153 153 GLU GLU D . n D 2 54 LEU 54 154 154 LEU LEU D . n D 2 55 THR 55 155 155 THR THR D . n D 2 56 LYS 56 156 156 LYS LYS D . n D 2 57 SER 57 157 157 SER SER D . n D 2 58 SER 58 158 158 SER SER D . n D 2 59 ILE 59 159 159 ILE ILE D . n D 2 60 ASN 60 160 160 ASN ASN D . n D 2 61 CYS 61 161 161 CYS CYS D . n D 2 62 SER 62 162 ? ? ? D . n D 2 63 ASN 63 163 ? ? ? D . n D 2 64 ALA 64 164 ? ? ? D . n D 2 65 ILE 65 165 ? ? ? D . n D 2 66 ASP 66 166 ? ? ? D . n D 2 67 PRO 67 167 ? ? ? D . n D 2 68 ASN 68 168 ? ? ? D . n D 2 69 ALA 69 169 ? ? ? D . n D 2 70 ASN 70 170 ? ? ? D . n D 2 71 PRO 71 171 ? ? ? D . n D 2 72 ARG 72 172 ? ? ? D . n D 2 73 ASN 73 173 ? ? ? D . n D 2 74 GLN 74 174 ? ? ? D . n D 2 75 PHE 75 175 ? ? ? D . n D 2 76 GLY 76 176 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN 1 1162 1162 ZN ZN B . F 3 ZN 1 1162 1162 ZN ZN D . G 4 HOH 1 2001 2001 HOH HOH A . G 4 HOH 2 2002 2002 HOH HOH A . G 4 HOH 3 2003 2003 HOH HOH A . G 4 HOH 4 2004 2004 HOH HOH A . G 4 HOH 5 2005 2005 HOH HOH A . G 4 HOH 6 2006 2006 HOH HOH A . G 4 HOH 7 2007 2007 HOH HOH A . G 4 HOH 8 2008 2008 HOH HOH A . G 4 HOH 9 2009 2009 HOH HOH A . G 4 HOH 10 2010 2010 HOH HOH A . G 4 HOH 11 2011 2011 HOH HOH A . G 4 HOH 12 2012 2012 HOH HOH A . G 4 HOH 13 2013 2013 HOH HOH A . H 4 HOH 1 2001 2001 HOH HOH B . H 4 HOH 2 2002 2002 HOH HOH B . H 4 HOH 3 2003 2003 HOH HOH B . H 4 HOH 4 2004 2004 HOH HOH B . H 4 HOH 5 2005 2005 HOH HOH B . H 4 HOH 6 2006 2006 HOH HOH B . H 4 HOH 7 2007 2007 HOH HOH B . H 4 HOH 8 2008 2008 HOH HOH B . H 4 HOH 9 2009 2009 HOH HOH B . H 4 HOH 10 2010 2010 HOH HOH B . I 4 HOH 1 2001 2001 HOH HOH C . I 4 HOH 2 2002 2002 HOH HOH C . I 4 HOH 3 2003 2003 HOH HOH C . I 4 HOH 4 2004 2004 HOH HOH C . I 4 HOH 5 2005 2005 HOH HOH C . I 4 HOH 6 2006 2006 HOH HOH C . I 4 HOH 7 2007 2007 HOH HOH C . I 4 HOH 8 2008 2008 HOH HOH C . I 4 HOH 9 2009 2009 HOH HOH C . I 4 HOH 10 2010 2010 HOH HOH C . I 4 HOH 11 2011 2011 HOH HOH C . I 4 HOH 12 2012 2012 HOH HOH C . I 4 HOH 13 2013 2013 HOH HOH C . I 4 HOH 14 2014 2014 HOH HOH C . I 4 HOH 15 2015 2015 HOH HOH C . I 4 HOH 16 2016 2016 HOH HOH C . I 4 HOH 17 2017 2017 HOH HOH C . I 4 HOH 18 2018 2018 HOH HOH C . J 4 HOH 1 2001 2001 HOH HOH D . J 4 HOH 2 2002 2002 HOH HOH D . J 4 HOH 3 2003 2003 HOH HOH D . J 4 HOH 4 2004 2004 HOH HOH D . J 4 HOH 5 2005 2005 HOH HOH D . J 4 HOH 6 2006 2006 HOH HOH D . J 4 HOH 7 2007 2007 HOH HOH D . J 4 HOH 8 2008 2008 HOH HOH D . J 4 HOH 9 2009 2009 HOH HOH D . J 4 HOH 10 2010 2010 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2J9U _cell.length_a 66.645 _cell.length_b 99.961 _cell.length_c 115.619 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J9U _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.entry_id 2J9U _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 49.7 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.40 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% ETHANOL, 0.1M KCL, pH 7.40' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-05-14 _diffrn_detector.details 'BENT MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI3 MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.873 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.873 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2J9U _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 55.470 _reflns.d_resolution_high 2.000 _reflns.number_obs 32191 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.10000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.2000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.020 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.11 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.49000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.400 _reflns_shell.pdbx_redundancy 6.17 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2J9U _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 25086 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.03 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.223 _refine.ls_R_factor_R_free 0.260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1316 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.927 _refine.correlation_coeff_Fo_to_Fc_free 0.892 _refine.B_iso_mean 23.39 _refine.aniso_B[1][1] -1.07000 _refine.aniso_B[2][2] 0.70000 _refine.aniso_B[3][3] 0.38000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'ZN PEAK DATASET FROM NATIVE CRYSTAL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.172 _refine.pdbx_overall_ESU_R_Free 0.160 _refine.overall_SU_ML 0.114 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.221 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2242 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 51 _refine_hist.number_atoms_total 2295 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 32.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 2288 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.703 1.974 ? 3106 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.143 5.000 ? 278 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.533 25.200 ? 100 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.836 15.000 ? 406 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 28.852 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.149 0.200 ? 374 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1666 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.218 0.200 ? 867 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.299 0.200 ? 1567 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 52 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.353 0.200 ? 38 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.595 0.200 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.239 1.500 ? 1478 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.550 2.000 ? 2296 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.970 3.000 ? 955 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.242 4.500 ? 810 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 769 0.15 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 769 0.15 0.05 'tight positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 352 0.07 0.05 'tight positional' 2 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 352 0.07 0.05 'tight positional' 2 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 769 0.32 0.50 'tight thermal' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 769 0.32 0.50 'tight thermal' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 352 0.40 0.50 'tight thermal' 2 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 352 0.40 0.50 'tight thermal' 2 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work 1802 _refine_ls_shell.R_factor_R_work 0.2410 _refine_ls_shell.percent_reflns_obs 99.79 _refine_ls_shell.R_factor_R_free 0.3270 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 0.464593 0.019547 0.885308 -0.146287 0.987714 0.054960 -0.873357 -0.155043 0.461745 7.32820 22.00290 10.39690 2 given ? 0.464593 0.019547 0.885308 -0.146287 0.987714 0.054960 -0.873357 -0.155043 0.461745 7.32820 22.00290 10.39690 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 C 1 1 B 2 2 D 2 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A PHE 2 . A LEU 95 . A PHE 148 A LEU 241 1 ? 1 2 1 C PHE 2 . C LEU 95 . C PHE 148 C LEU 241 1 ? 2 1 1 B VAL 15 . B CYS 61 . B VAL 115 B CYS 161 1 ? 2 2 1 D VAL 15 . D CYS 61 . D VAL 115 D CYS 161 1 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _database_PDB_matrix.entry_id 2J9U _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2J9U _struct.title '2 Angstrom X-ray structure of the yeast ESCRT-I Vps28 C-terminus in complex with the NZF-N domain from ESCRT-II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2J9U _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'ZINC-FINGER, METAL-BINDING, PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP VPS28_YEAST 1 ? ? Q02767 ? 2 UNP VPS36_YEAST 2 ? ? Q06696 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2J9U A 2 ? 96 ? Q02767 148 ? 242 ? 148 242 2 2 2J9U B 10 ? 71 ? Q06696 110 ? 171 ? 110 171 3 1 2J9U C 2 ? 96 ? Q02767 148 ? 242 ? 148 242 4 2 2J9U D 10 ? 71 ? Q06696 110 ? 171 ? 110 171 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2J9U MET A 1 ? UNP Q02767 ? ? 'expression tag' 147 1 2 2J9U MET B 1 ? UNP Q06696 ? ? 'expression tag' 101 2 2 2J9U ALA B 2 ? UNP Q06696 ? ? 'expression tag' 102 3 2 2J9U HIS B 3 ? UNP Q06696 ? ? 'expression tag' 103 4 2 2J9U HIS B 4 ? UNP Q06696 ? ? 'expression tag' 104 5 2 2J9U HIS B 5 ? UNP Q06696 ? ? 'expression tag' 105 6 2 2J9U HIS B 6 ? UNP Q06696 ? ? 'expression tag' 106 7 2 2J9U HIS B 7 ? UNP Q06696 ? ? 'expression tag' 107 8 2 2J9U HIS B 8 ? UNP Q06696 ? ? 'expression tag' 108 9 2 2J9U MET B 9 ? UNP Q06696 ? ? 'expression tag' 109 10 2 2J9U ARG B 72 ? UNP Q06696 ? ? 'expression tag' 172 11 2 2J9U ASN B 73 ? UNP Q06696 ? ? 'expression tag' 173 12 2 2J9U GLN B 74 ? UNP Q06696 ? ? 'expression tag' 174 13 2 2J9U PHE B 75 ? UNP Q06696 ? ? 'expression tag' 175 14 2 2J9U GLY B 76 ? UNP Q06696 ? ? 'expression tag' 176 15 3 2J9U MET C 1 ? UNP Q02767 ? ? 'expression tag' 147 16 4 2J9U MET D 1 ? UNP Q06696 ? ? 'expression tag' 101 17 4 2J9U ALA D 2 ? UNP Q06696 ? ? 'expression tag' 102 18 4 2J9U HIS D 3 ? UNP Q06696 ? ? 'expression tag' 103 19 4 2J9U HIS D 4 ? UNP Q06696 ? ? 'expression tag' 104 20 4 2J9U HIS D 5 ? UNP Q06696 ? ? 'expression tag' 105 21 4 2J9U HIS D 6 ? UNP Q06696 ? ? 'expression tag' 106 22 4 2J9U HIS D 7 ? UNP Q06696 ? ? 'expression tag' 107 23 4 2J9U HIS D 8 ? UNP Q06696 ? ? 'expression tag' 108 24 4 2J9U MET D 9 ? UNP Q06696 ? ? 'expression tag' 109 25 4 2J9U ARG D 72 ? UNP Q06696 ? ? 'expression tag' 172 26 4 2J9U ASN D 73 ? UNP Q06696 ? ? 'expression tag' 173 27 4 2J9U GLN D 74 ? UNP Q06696 ? ? 'expression tag' 174 28 4 2J9U PHE D 75 ? UNP Q06696 ? ? 'expression tag' 175 29 4 2J9U GLY D 76 ? UNP Q06696 ? ? 'expression tag' 176 30 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H 2 1 C,D,F,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? LEU A 23 ? ASN A 149 LEU A 169 1 ? 21 HELX_P HELX_P2 2 ALA A 27 ? THR A 46 ? ALA A 173 THR A 192 1 ? 20 HELX_P HELX_P3 3 ASN A 52 ? LYS A 65 ? ASN A 198 LYS A 211 1 ? 14 HELX_P HELX_P4 4 THR A 73 ? LEU A 95 ? THR A 219 LEU A 241 1 ? 23 HELX_P HELX_P5 5 ASP B 51 ? LYS B 56 ? ASP B 151 LYS B 156 1 ? 6 HELX_P HELX_P6 6 SER B 57 ? ILE B 59 ? SER B 157 ILE B 159 5 ? 3 HELX_P HELX_P7 7 ASN C 3 ? LEU C 23 ? ASN C 149 LEU C 169 1 ? 21 HELX_P HELX_P8 8 ALA C 27 ? THR C 46 ? ALA C 173 THR C 192 1 ? 20 HELX_P HELX_P9 9 ASN C 52 ? LYS C 65 ? ASN C 198 LYS C 211 1 ? 14 HELX_P HELX_P10 10 THR C 73 ? LEU C 95 ? THR C 219 LEU C 241 1 ? 23 HELX_P HELX_P11 11 ASP D 51 ? LYS D 56 ? ASP D 151 LYS D 156 1 ? 6 HELX_P HELX_P12 12 SER D 57 ? ILE D 59 ? SER D 157 ILE D 159 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B CYS 20 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 120 B ZN 1162 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc2 metalc ? ? B CYS 23 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 123 B ZN 1162 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc3 metalc ? ? B CYS 43 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 143 B ZN 1162 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc4 metalc ? ? B CYS 46 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 146 B ZN 1162 1_555 ? ? ? ? ? ? ? 2.304 ? ? metalc5 metalc ? ? D CYS 20 SG ? ? ? 1_555 F ZN . ZN ? ? D CYS 120 D ZN 1162 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc6 metalc ? ? D CYS 23 SG ? ? ? 1_555 F ZN . ZN ? ? D CYS 123 D ZN 1162 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc7 metalc ? ? D CYS 43 SG ? ? ? 1_555 F ZN . ZN ? ? D CYS 143 D ZN 1162 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc8 metalc ? ? D CYS 46 SG ? ? ? 1_555 F ZN . ZN ? ? D CYS 146 D ZN 1162 1_555 ? ? ? ? ? ? ? 2.375 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 20 ? B CYS 120 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 23 ? B CYS 123 ? 1_555 110.1 ? 2 SG ? B CYS 20 ? B CYS 120 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 43 ? B CYS 143 ? 1_555 106.7 ? 3 SG ? B CYS 23 ? B CYS 123 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 43 ? B CYS 143 ? 1_555 103.1 ? 4 SG ? B CYS 20 ? B CYS 120 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 46 ? B CYS 146 ? 1_555 105.8 ? 5 SG ? B CYS 23 ? B CYS 123 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 46 ? B CYS 146 ? 1_555 120.4 ? 6 SG ? B CYS 43 ? B CYS 143 ? 1_555 ZN ? E ZN . ? B ZN 1162 ? 1_555 SG ? B CYS 46 ? B CYS 146 ? 1_555 110.2 ? 7 SG ? D CYS 20 ? D CYS 120 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 23 ? D CYS 123 ? 1_555 112.4 ? 8 SG ? D CYS 20 ? D CYS 120 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 43 ? D CYS 143 ? 1_555 106.1 ? 9 SG ? D CYS 23 ? D CYS 123 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 43 ? D CYS 143 ? 1_555 101.6 ? 10 SG ? D CYS 20 ? D CYS 120 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 46 ? D CYS 146 ? 1_555 104.1 ? 11 SG ? D CYS 23 ? D CYS 123 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 46 ? D CYS 146 ? 1_555 122.0 ? 12 SG ? D CYS 43 ? D CYS 143 ? 1_555 ZN ? F ZN . ? D ZN 1162 ? 1_555 SG ? D CYS 46 ? D CYS 146 ? 1_555 109.9 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 38 B . ? LEU 138 B PRO 39 B ? PRO 139 B 1 -2.61 2 LEU 38 D . ? LEU 138 D PRO 39 D ? PRO 139 D 1 -3.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details BA ? 2 ? DA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense BA 1 2 ? anti-parallel DA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id BA 1 SER B 16 ? VAL B 19 ? SER B 116 VAL B 119 BA 2 SER B 26 ? THR B 29 ? SER B 126 THR B 129 DA 1 SER D 16 ? VAL D 19 ? SER D 116 VAL D 119 DA 2 SER D 26 ? THR D 29 ? SER D 126 THR D 129 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id BA 1 2 N TRP B 18 ? N TRP B 118 O ASN B 27 ? O ASN B 127 DA 1 2 N TRP D 18 ? N TRP D 118 O ASN D 27 ? O ASN D 127 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 1162 ? 4 'BINDING SITE FOR RESIDUE ZN B 1162' AC2 Software D ZN 1162 ? 4 'BINDING SITE FOR RESIDUE ZN D 1162' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS B 20 ? CYS B 120 . ? 1_555 ? 2 AC1 4 CYS B 23 ? CYS B 123 . ? 1_555 ? 3 AC1 4 CYS B 43 ? CYS B 143 . ? 1_555 ? 4 AC1 4 CYS B 46 ? CYS B 146 . ? 1_555 ? 5 AC2 4 CYS D 20 ? CYS D 120 . ? 1_555 ? 6 AC2 4 CYS D 23 ? CYS D 123 . ? 1_555 ? 7 AC2 4 CYS D 43 ? CYS D 143 . ? 1_555 ? 8 AC2 4 CYS D 46 ? CYS D 146 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 C ASP 204 ? ? O C HOH 2017 ? ? 2.12 2 1 O A GLU 220 ? ? O A HOH 2009 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 155 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OH _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 TYR _pdbx_validate_symm_contact.auth_seq_id_2 238 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 1.78 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CZ _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 PHE _pdbx_validate_rmsd_bond.auth_seq_id_1 133 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 PHE _pdbx_validate_rmsd_bond.auth_seq_id_2 133 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.504 _pdbx_validate_rmsd_bond.bond_target_value 1.369 _pdbx_validate_rmsd_bond.bond_deviation 0.135 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 208 ? ? CZ A ARG 208 ? ? NH1 A ARG 208 ? ? 124.31 120.30 4.01 0.50 N 2 1 NE A ARG 208 ? ? CZ A ARG 208 ? ? NH2 A ARG 208 ? ? 115.98 120.30 -4.32 0.50 N 3 1 CB A LEU 226 ? ? CG A LEU 226 ? ? CD2 A LEU 226 ? ? 122.49 111.00 11.49 1.70 N # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 31.4770 -9.9590 16.3310 0.0013 -0.0215 -0.0272 0.0402 0.0154 -0.0108 3.6089 2.8347 9.3920 2.6205 5.2915 2.6086 -0.0429 -0.0302 -0.0564 0.2741 -0.0754 -0.0619 0.4530 0.1152 0.1182 'X-RAY DIFFRACTION' 2 ? refined 21.6980 -7.5860 10.7510 -0.0377 -0.0670 -0.0643 -0.0108 0.0127 -0.0150 12.9016 2.1443 6.3570 -3.9163 -0.1377 -2.4224 0.1634 -0.2073 -0.4653 -0.0178 0.0210 0.1432 0.4226 -0.0732 -0.1845 'X-RAY DIFFRACTION' 3 ? refined 11.5290 -4.8100 4.6380 -0.0452 0.0969 -0.0391 -0.0049 -0.0281 -0.0113 11.5413 8.1548 12.5705 -3.8361 -1.3565 -2.7794 0.3144 0.6259 -0.2180 -0.4313 -0.1620 0.2734 0.0568 -0.8904 -0.1525 'X-RAY DIFFRACTION' 4 ? refined 6.8200 -5.5240 13.9300 -0.0692 0.2027 -0.0042 -0.0539 0.0187 -0.0146 17.6230 4.8408 7.6434 -1.2952 4.1759 -0.2413 0.2402 -0.4516 -0.2095 0.1074 -0.2820 0.6906 0.6422 -0.9376 0.0417 'X-RAY DIFFRACTION' 5 ? refined 22.2220 -4.8810 19.2100 -0.0326 -0.0054 -0.0673 0.0159 0.0232 -0.0042 13.8202 0.4814 4.3333 -2.5432 1.8253 -0.1018 -0.1059 -0.5263 -0.0583 0.1600 0.2322 0.0161 0.1521 -0.1019 -0.1262 'X-RAY DIFFRACTION' 6 ? refined 25.8450 4.9360 18.0390 0.0652 -0.0616 -0.0080 -0.0206 -0.0472 -0.0638 15.5617 13.3720 13.6465 0.0000 7.2950 -6.0765 -0.2025 -0.8234 0.7841 0.4223 0.3436 -0.9608 -0.3445 -0.0159 -0.1412 'X-RAY DIFFRACTION' 7 ? refined 14.3480 5.0910 17.9560 0.0123 0.0287 -0.0579 0.0706 0.0361 -0.0305 19.5373 3.1698 5.1556 -0.8215 0.7914 -4.0412 -0.0600 -0.5972 0.2545 0.2758 0.1475 0.0924 -0.9184 -0.5013 -0.0875 'X-RAY DIFFRACTION' 8 ? refined 4.9260 2.6240 20.2000 -0.0586 0.2988 -0.0419 0.0917 0.0448 0.0896 35.3569 4.7986 7.0521 2.5665 1.2451 2.3425 -0.3853 -0.7615 0.6415 -0.0822 0.3584 0.1056 -0.4271 -0.9512 0.0268 'X-RAY DIFFRACTION' 9 ? refined 1.2380 2.0790 11.1030 -0.1356 0.3021 0.0762 0.1040 -0.0110 0.0732 0.0000 0.0000 30.1547 18.1596 40.3050 16.7359 0.2178 1.0982 -0.3479 0.2794 -0.1041 0.4349 -0.1466 -2.0519 -0.1136 'X-RAY DIFFRACTION' 10 ? refined 9.7320 5.5270 7.4540 -0.0124 0.1068 -0.0489 0.1152 0.0640 0.0280 18.8666 6.4648 5.9984 3.0091 2.3365 -5.4726 0.0534 0.8100 0.4551 0.2019 0.1791 -0.2145 -0.2550 -0.9694 -0.2324 'X-RAY DIFFRACTION' 11 ? refined 17.8670 4.7340 6.7780 0.0141 -0.0329 -0.0519 0.0326 0.0266 0.0488 4.8970 2.3132 7.6253 -2.1170 1.3943 1.0845 0.3243 0.2754 0.2982 -0.1335 -0.1393 -0.1989 -0.1681 -0.5017 -0.1849 'X-RAY DIFFRACTION' 12 ? refined 17.8050 -2.5170 34.6060 -0.2124 -0.0113 -0.1889 0.0748 0.0352 -0.0085 9.3100 8.7692 36.2076 0.0000 1.0732 -5.4445 -0.1218 -0.6903 0.1210 0.0120 -0.0092 0.1010 -0.0103 -0.5768 0.1310 'X-RAY DIFFRACTION' 13 ? refined 15.6800 1.8010 33.6190 -0.1389 0.0951 -0.0371 0.2250 0.0752 -0.0487 21.8116 46.7255 28.3772 19.9420 0.0000 1.7308 -0.8814 -0.2770 0.3296 -0.4782 0.3760 -1.4144 -1.2831 -2.0787 0.5054 'X-RAY DIFFRACTION' 14 ? refined 15.3620 -10.1740 40.0640 -0.0437 0.2703 -0.0748 -0.2546 0.1204 0.0794 0.0000 0.0000 22.8514 30.2056 32.2008 25.0903 -0.9564 -0.2993 -2.5536 2.0877 -0.8019 1.6864 2.2348 -2.5579 1.7583 'X-RAY DIFFRACTION' 15 ? refined 16.9340 -15.7240 34.0340 -0.0569 -0.1717 0.0918 -0.0486 0.0509 0.0653 22.6711 55.4613 18.3997 0.0000 7.5358 -5.9240 0.5050 0.7461 -2.5324 -1.1907 0.2151 -0.7207 1.8661 -0.0662 -0.7201 'X-RAY DIFFRACTION' 16 ? refined 14.4630 -5.2210 29.1340 -0.1692 0.0634 -0.1939 0.0014 0.0061 0.0403 4.9346 16.0847 9.4316 -6.9688 3.1075 -5.6352 0.1081 -0.5351 0.0261 -0.1152 0.1052 0.1459 0.0713 -0.8313 -0.2134 'X-RAY DIFFRACTION' 17 ? refined 23.9630 -5.9500 35.5860 -0.2335 -0.0059 -0.2036 0.0516 -0.0023 0.0502 8.2330 10.7712 17.6787 -1.9670 0.9331 1.1667 0.2975 -0.5888 0.0384 0.1335 0.0145 -0.2055 0.1798 0.5840 -0.3121 'X-RAY DIFFRACTION' 18 ? refined 37.1560 8.0510 -8.2410 -0.0306 -0.0331 0.0409 -0.0190 0.0121 -0.0582 10.0517 8.9296 13.5534 5.7834 -1.6554 1.8886 -0.1048 0.5155 -0.3874 -0.1641 0.2272 -0.7690 -0.2016 0.5711 -0.1223 'X-RAY DIFFRACTION' 19 ? refined ? ? ? -0.0676 -0.0839 0.0034 0.0205 -0.0192 -0.0400 6.1900 2.6043 5.5818 -2.2075 -4.4868 1.7766 -0.0464 0.3073 -0.0972 0.0303 -0.0547 0.2698 -0.1072 -0.2974 0.1012 'X-RAY DIFFRACTION' 20 ? refined 18.6040 17.4120 11.8530 -0.0268 0.0344 -0.0275 0.0888 0.0649 -0.0671 7.7073 17.3659 20.8192 6.0309 8.1944 2.1101 -0.4327 -1.0960 0.3693 0.5631 -0.0311 0.9005 -0.8390 -0.3090 0.4638 'X-RAY DIFFRACTION' 21 ? refined 26.6840 15.4370 9.5980 -0.0442 0.0337 -0.0565 0.0460 -0.0295 -0.0257 8.0993 5.9792 17.9990 -1.0980 -5.5501 4.1932 -0.0953 -1.0160 0.0230 0.2050 0.0322 0.2178 0.2746 -0.5860 0.0631 'X-RAY DIFFRACTION' 22 ? refined ? ? ? -0.0477 -0.1036 -0.0088 -0.0044 -0.0310 -0.0390 1.7251 2.1316 5.6049 0.8530 -0.5385 0.3687 -0.1668 -0.0118 0.4482 -0.0827 0.2511 -0.1883 -0.1540 0.3201 -0.0844 'X-RAY DIFFRACTION' 23 ? refined 36.9210 23.6650 -5.4750 -0.0410 -0.0689 0.0805 -0.0818 -0.0201 0.0355 8.5758 19.0467 7.1843 -5.2084 0.0000 2.8928 0.5603 -0.2998 0.6184 -1.0594 -0.1230 -0.0229 -0.1451 0.2587 -0.4373 'X-RAY DIFFRACTION' 24 ? refined 30.2350 26.3270 2.3130 0.0200 -0.1682 0.1778 0.0322 -0.0293 -0.0659 10.7354 1.8591 20.6668 -1.5589 0.0000 0.7118 -0.1402 -0.2135 0.8683 0.0851 -0.0398 -0.2146 -0.5781 0.1287 0.1799 'X-RAY DIFFRACTION' 25 ? refined 29.3090 24.7260 11.4530 0.0440 0.0217 0.0416 0.1055 -0.0840 -0.1351 9.1748 9.1163 23.0849 8.3943 -4.9679 0.8667 -0.4830 -0.8523 0.9868 0.1332 0.6009 -0.1068 -0.1672 0.0768 -0.1179 'X-RAY DIFFRACTION' 26 ? refined 20.3870 24.5420 15.2160 0.1515 0.1631 0.0092 0.2041 0.0353 -0.2225 15.3040 7.1750 10.4645 -2.6088 8.0353 0.9822 0.2485 -1.0162 0.2768 0.9683 0.3559 0.4449 0.3506 0.0393 -0.6044 'X-RAY DIFFRACTION' 27 ? refined 18.4530 26.1270 4.3070 0.0515 -0.0668 0.0760 0.1610 -0.0720 -0.0637 19.5088 0.0000 4.9613 27.7769 -1.4497 10.8462 0.1223 0.1766 0.8104 -0.1935 -0.1537 -0.1968 -0.8251 -0.8014 0.0313 'X-RAY DIFFRACTION' 28 ? refined 21.7600 24.3210 -2.8440 0.0404 -0.0537 0.1020 0.0786 -0.0778 0.0112 13.9009 5.2187 17.7823 -7.0511 -7.6202 6.4130 -0.0632 0.6541 0.1699 -0.6003 -0.1444 0.6528 -1.1624 -1.0867 0.2075 'X-RAY DIFFRACTION' 29 ? refined 29.5490 19.5170 -10.6220 0.1414 -0.0325 -0.0277 0.0717 0.0201 0.0473 18.8987 8.2200 11.8179 -3.5488 0.0000 8.4049 -0.1503 0.3988 0.3133 -1.1563 -0.0992 -0.2422 -0.6600 -0.0563 0.2496 'X-RAY DIFFRACTION' 30 ? refined 45.9260 19.7140 9.9410 -0.1245 -0.0719 -0.0495 -0.0595 -0.0936 -0.0461 25.1946 7.6306 10.4091 -7.1901 14.2123 -3.0068 -0.1848 0.1638 0.0777 0.5037 0.0590 0.0592 -0.6530 0.5175 0.1259 'X-RAY DIFFRACTION' 31 ? refined 46.1540 22.6200 12.4610 -0.1193 -0.1127 -0.0855 -0.0815 -0.0903 -0.1156 0.0000 0.0000 27.2437 24.8319 43.7382 28.6253 0.4239 -0.2144 0.6703 0.3865 -0.8003 -0.1539 -0.3972 1.1119 0.3765 'X-RAY DIFFRACTION' 32 ? refined 50.0820 9.3670 14.6880 0.0624 -0.1250 0.1638 0.0229 -0.2037 0.1081 25.6088 16.3968 6.0560 -6.6947 -0.5379 1.6930 0.1575 -0.2765 -1.6975 1.7970 -0.3224 -0.3806 0.6858 0.9086 0.1649 'X-RAY DIFFRACTION' 33 ? refined 39.5340 16.4570 14.4940 -0.0709 -0.0299 -0.0955 -0.0155 -0.0545 -0.0797 14.4143 25.5769 10.1414 0.0000 3.8398 -9.4979 0.2027 -0.8816 -0.3474 0.6344 -0.1406 0.7586 -0.1261 0.0427 -0.0622 'X-RAY DIFFRACTION' 34 ? refined 43.3850 11.4960 6.4070 -0.1415 -0.1856 0.0023 0.0807 -0.1184 -0.0804 26.2228 3.3072 16.1732 9.1180 -3.6899 0.1800 0.3017 0.2401 -1.2290 0.3637 0.2233 -0.3862 0.4060 0.8482 -0.5249 'X-RAY DIFFRACTION' 35 ? refined 51.7240 15.6950 7.3400 -0.1724 0.0150 0.0805 -0.0099 -0.0798 -0.0884 42.0770 9.6836 7.3130 8.3147 16.1772 6.1618 0.4220 0.7261 -1.3309 0.1190 -0.4954 -0.8018 0.3638 0.3498 0.0735 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 148 ? ? A 154 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 155 ? ? A 162 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 163 ? ? A 170 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 171 ? ? A 180 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 181 ? ? A 192 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 193 ? ? A 199 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 200 ? ? A 207 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 208 ? ? A 213 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 214 ? ? A 221 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 222 ? ? A 226 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 227 ? ? A 232 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 B 115 ? ? B 122 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 B 123 ? ? B 128 ? ? ? ? 'X-RAY DIFFRACTION' 14 14 B 129 ? ? B 134 ? ? ? ? 'X-RAY DIFFRACTION' 15 15 B 135 ? ? B 140 ? ? ? ? 'X-RAY DIFFRACTION' 16 16 B 141 ? ? B 152 ? ? ? ? 'X-RAY DIFFRACTION' 17 17 B 153 ? ? B 161 ? ? ? ? 'X-RAY DIFFRACTION' 18 18 C 148 ? ? C 152 ? ? ? ? 'X-RAY DIFFRACTION' 19 19 C 153 ? ? C 169 ? ? ? ? 'X-RAY DIFFRACTION' 20 20 C 170 ? ? C 174 ? ? ? ? 'X-RAY DIFFRACTION' 21 21 C 175 ? ? C 183 ? ? ? ? 'X-RAY DIFFRACTION' 22 22 C 184 ? ? C 192 ? ? ? ? 'X-RAY DIFFRACTION' 23 23 C 193 ? ? C 197 ? ? ? ? 'X-RAY DIFFRACTION' 24 24 C 198 ? ? C 205 ? ? ? ? 'X-RAY DIFFRACTION' 25 25 C 206 ? ? C 210 ? ? ? ? 'X-RAY DIFFRACTION' 26 26 C 211 ? ? C 221 ? ? ? ? 'X-RAY DIFFRACTION' 27 27 C 222 ? ? C 226 ? ? ? ? 'X-RAY DIFFRACTION' 28 28 C 227 ? ? C 232 ? ? ? ? 'X-RAY DIFFRACTION' 29 29 C 233 ? ? C 241 ? ? ? ? 'X-RAY DIFFRACTION' 30 30 D 115 ? ? D 123 ? ? ? ? 'X-RAY DIFFRACTION' 31 31 D 124 ? ? D 129 ? ? ? ? 'X-RAY DIFFRACTION' 32 32 D 130 ? ? D 137 ? ? ? ? 'X-RAY DIFFRACTION' 33 33 D 138 ? ? D 148 ? ? ? ? 'X-RAY DIFFRACTION' 34 34 D 149 ? ? D 154 ? ? ? ? 'X-RAY DIFFRACTION' 35 35 D 155 ? ? D 161 ? ? ? ? # _pdbx_entry_details.entry_id 2J9U _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;INITIAL METHIONINE NOT NATIVE TO VPS28 SEQUENCE MAH6 AFFINITY TAG AND VPS36 RESIDUES 162-176 WERE DISORDERED IN THIS STRUCTURE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 147 ? A MET 1 2 1 Y 1 A ASP 242 ? A ASP 96 3 1 Y 1 B MET 101 ? B MET 1 4 1 Y 1 B ALA 102 ? B ALA 2 5 1 Y 1 B HIS 103 ? B HIS 3 6 1 Y 1 B HIS 104 ? B HIS 4 7 1 Y 1 B HIS 105 ? B HIS 5 8 1 Y 1 B HIS 106 ? B HIS 6 9 1 Y 1 B HIS 107 ? B HIS 7 10 1 Y 1 B HIS 108 ? B HIS 8 11 1 Y 1 B MET 109 ? B MET 9 12 1 Y 1 B ALA 110 ? B ALA 10 13 1 Y 1 B SER 111 ? B SER 11 14 1 Y 1 B ALA 112 ? B ALA 12 15 1 Y 1 B ASP 113 ? B ASP 13 16 1 Y 1 B VAL 114 ? B VAL 14 17 1 Y 1 B SER 162 ? B SER 62 18 1 Y 1 B ASN 163 ? B ASN 63 19 1 Y 1 B ALA 164 ? B ALA 64 20 1 Y 1 B ILE 165 ? B ILE 65 21 1 Y 1 B ASP 166 ? B ASP 66 22 1 Y 1 B PRO 167 ? B PRO 67 23 1 Y 1 B ASN 168 ? B ASN 68 24 1 Y 1 B ALA 169 ? B ALA 69 25 1 Y 1 B ASN 170 ? B ASN 70 26 1 Y 1 B PRO 171 ? B PRO 71 27 1 Y 1 B ARG 172 ? B ARG 72 28 1 Y 1 B ASN 173 ? B ASN 73 29 1 Y 1 B GLN 174 ? B GLN 74 30 1 Y 1 B PHE 175 ? B PHE 75 31 1 Y 1 B GLY 176 ? B GLY 76 32 1 Y 1 C MET 147 ? C MET 1 33 1 Y 1 C ASP 242 ? C ASP 96 34 1 Y 1 D MET 101 ? D MET 1 35 1 Y 1 D ALA 102 ? D ALA 2 36 1 Y 1 D HIS 103 ? D HIS 3 37 1 Y 1 D HIS 104 ? D HIS 4 38 1 Y 1 D HIS 105 ? D HIS 5 39 1 Y 1 D HIS 106 ? D HIS 6 40 1 Y 1 D HIS 107 ? D HIS 7 41 1 Y 1 D HIS 108 ? D HIS 8 42 1 Y 1 D MET 109 ? D MET 9 43 1 Y 1 D ALA 110 ? D ALA 10 44 1 Y 1 D SER 111 ? D SER 11 45 1 Y 1 D ALA 112 ? D ALA 12 46 1 Y 1 D ASP 113 ? D ASP 13 47 1 Y 1 D VAL 114 ? D VAL 14 48 1 Y 1 D SER 162 ? D SER 62 49 1 Y 1 D ASN 163 ? D ASN 63 50 1 Y 1 D ALA 164 ? D ALA 64 51 1 Y 1 D ILE 165 ? D ILE 65 52 1 Y 1 D ASP 166 ? D ASP 66 53 1 Y 1 D PRO 167 ? D PRO 67 54 1 Y 1 D ASN 168 ? D ASN 68 55 1 Y 1 D ALA 169 ? D ALA 69 56 1 Y 1 D ASN 170 ? D ASN 70 57 1 Y 1 D PRO 171 ? D PRO 71 58 1 Y 1 D ARG 172 ? D ARG 72 59 1 Y 1 D ASN 173 ? D ASN 73 60 1 Y 1 D GLN 174 ? D GLN 74 61 1 Y 1 D PHE 175 ? D PHE 75 62 1 Y 1 D GLY 176 ? D GLY 76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'ZN PEAK DATASET FROM NATIVE CRYSTAL' # _atom_sites.entry_id 2J9U _atom_sites.fract_transf_matrix[1][1] 0.015005 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010004 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008649 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_