HEADER DE NOVO PROTEIN 27-NOV-06 2JAB TITLE A DESIGNED ANKYRIN REPEAT PROTEIN EVOLVED TO PICOMOLAR AFFINITY TO TITLE 2 HER2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: H10-2-G3; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE KEYWDS HER2, DARPIN, ANKYRIN REPEAT PROTEIN, MEMBRANE PROTEIN, HUMAN KEYWDS 2 EPIDERMAL GROWTH FACTOR RECEPTOR 2, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.ZAHND,E.WYLER,J.M.SCHWENK,D.STEINER,M.C.LAWRENCE,N.M.MCKERN, AUTHOR 2 F.PECORARI,C.W.WARD,T.O.JOOS,A.PLUCKTHUN REVDAT 7 13-DEC-23 2JAB 1 REMARK REVDAT 6 05-JUL-17 2JAB 1 REMARK REVDAT 5 15-FEB-17 2JAB 1 SOURCE REMARK VERSN FORMUL REVDAT 4 09-JUN-09 2JAB 1 REMARK REVDAT 3 24-FEB-09 2JAB 1 VERSN REVDAT 2 29-MAY-07 2JAB 1 JRNL REVDAT 1 08-MAY-07 2JAB 0 JRNL AUTH C.ZAHND,E.WYLER,J.M.SCHWENK,D.STEINER,M.C.LAWRENCE, JRNL AUTH 2 N.M.MCKERN,F.PECORARI,C.W.WARD,T.O.JOOS,A.PLUCKTHUN JRNL TITL A DESIGNED ANKYRIN REPEAT PROTEIN EVOLVED TO PICOMOLAR JRNL TITL 2 AFFINITY TO HER2 JRNL REF J.MOL.BIOL. V. 369 1015 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17466328 JRNL DOI 10.1016/J.JMB.2007.03.028 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 53757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2929 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3768 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2792 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 488 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : 0.98000 REMARK 3 B33 (A**2) : -0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.886 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2828 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3827 ; 1.285 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 370 ; 4.939 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;38.868 ;26.538 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 481 ;13.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;14.367 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 451 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2120 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1412 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1971 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 334 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 54 ; 0.175 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.219 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1880 ; 4.844 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2891 ; 5.655 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1029 ; 8.352 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 936 ;12.418 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 58.550 26.486 -5.269 REMARK 3 T TENSOR REMARK 3 T11: -0.2180 T22: -0.1714 REMARK 3 T33: -0.2003 T12: -0.0024 REMARK 3 T13: 0.0200 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.5764 L22: 1.2690 REMARK 3 L33: 5.7426 L12: 0.5002 REMARK 3 L13: 0.0457 L23: 0.9440 REMARK 3 S TENSOR REMARK 3 S11: -0.0150 S12: 0.0373 S13: -0.0516 REMARK 3 S21: 0.0590 S22: 0.0973 S23: -0.0428 REMARK 3 S31: 0.1483 S32: 0.1481 S33: -0.0822 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 12 B 135 REMARK 3 ORIGIN FOR THE GROUP (A): 41.477 12.921 -8.069 REMARK 3 T TENSOR REMARK 3 T11: -0.2089 T22: -0.1760 REMARK 3 T33: -0.1717 T12: -0.0342 REMARK 3 T13: -0.0048 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 2.3790 L22: 1.8801 REMARK 3 L33: 4.5976 L12: 0.6612 REMARK 3 L13: 1.6090 L23: 0.2588 REMARK 3 S TENSOR REMARK 3 S11: 0.1375 S12: -0.0634 S13: -0.1082 REMARK 3 S21: 0.1811 S22: -0.0260 S23: -0.0134 REMARK 3 S31: 0.1137 S32: 0.0362 S33: -0.1114 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 12 C 136 REMARK 3 ORIGIN FOR THE GROUP (A): 77.8070 41.3100 32.6150 REMARK 3 T TENSOR REMARK 3 T11: -0.2399 T22: -0.2125 REMARK 3 T33: -0.2164 T12: -0.0085 REMARK 3 T13: 0.0086 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 1.9406 L22: 0.8131 REMARK 3 L33: 4.0731 L12: -0.1609 REMARK 3 L13: -0.4543 L23: 0.2973 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: 0.0966 S13: 0.0422 REMARK 3 S21: -0.0203 S22: -0.0164 S23: -0.0345 REMARK 3 S31: -0.0852 S32: 0.0539 S33: -0.0252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. NO NCS RESTRAINTS WERE APPLIED DURING THE FINAL REMARK 3 STAGES OF REFINEMENT REMARK 4 REMARK 4 2JAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1290030629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : AXCO CAPILLARY REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU IMAGE PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58105 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 73.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.88000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRIES 1MJ0 AND 2BKG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 6 MG/ML IN 20 MM SODIUM REMARK 280 PHOSPHATE, 75 MM NACL PH 7.4. PRECIPITANT: 0.1 M TRISHCL (PH 8.5) REMARK 280 , 2.3 M (NH4)2SO4, 10% GLYCEROL (V/V). ROOM TEMPERATURE., PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.04000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.09550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.04000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.09550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C2040 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 GLY A 11 REMARK 465 ASN A 136 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 GLY B 11 REMARK 465 ASN B 136 REMARK 465 MET C 1 REMARK 465 ARG C 2 REMARK 465 GLY C 3 REMARK 465 SER C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 GLY C 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2072 O HOH B 2073 1.89 REMARK 500 O HOH A 2025 O HOH A 2044 2.14 REMARK 500 CD1 ILE A 90 O HOH A 2044 2.16 REMARK 500 O HOH B 2015 O HOH B 2034 2.17 REMARK 500 OD2 ASP A 28 O HOH A 2018 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 39 105.54 -59.75 REMARK 500 ASN B 125 58.99 -105.66 REMARK 500 GLN B 133 -72.57 -115.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2042 DISTANCE = 6.00 ANGSTROMS DBREF 2JAB A 1 136 PDB 2JAB 2JAB 1 136 DBREF 2JAB B 1 136 PDB 2JAB 2JAB 1 136 DBREF 2JAB C 1 136 PDB 2JAB 2JAB 1 136 SEQRES 1 A 136 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 A 136 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 A 136 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 A 136 VAL ASN ALA LYS ASP GLU TYR GLY LEU THR PRO LEU TYR SEQRES 5 A 136 LEU ALA THR ALA HIS GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 6 A 136 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA VAL ASP ALA SEQRES 7 A 136 ILE GLY PHE THR PRO LEU HIS LEU ALA ALA PHE ILE GLY SEQRES 8 A 136 HIS LEU GLU ILE ALA GLU VAL LEU LEU LYS HIS GLY ALA SEQRES 9 A 136 ASP VAL ASN ALA GLN ASP LYS PHE GLY LYS THR ALA PHE SEQRES 10 A 136 ASP ILE SER ILE GLY ASN GLY ASN GLU ASP LEU ALA GLU SEQRES 11 A 136 ILE LEU GLN LYS LEU ASN SEQRES 1 B 136 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 B 136 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 B 136 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 B 136 VAL ASN ALA LYS ASP GLU TYR GLY LEU THR PRO LEU TYR SEQRES 5 B 136 LEU ALA THR ALA HIS GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 6 B 136 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA VAL ASP ALA SEQRES 7 B 136 ILE GLY PHE THR PRO LEU HIS LEU ALA ALA PHE ILE GLY SEQRES 8 B 136 HIS LEU GLU ILE ALA GLU VAL LEU LEU LYS HIS GLY ALA SEQRES 9 B 136 ASP VAL ASN ALA GLN ASP LYS PHE GLY LYS THR ALA PHE SEQRES 10 B 136 ASP ILE SER ILE GLY ASN GLY ASN GLU ASP LEU ALA GLU SEQRES 11 B 136 ILE LEU GLN LYS LEU ASN SEQRES 1 C 136 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ASP SEQRES 2 C 136 LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN SEQRES 3 C 136 ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP SEQRES 4 C 136 VAL ASN ALA LYS ASP GLU TYR GLY LEU THR PRO LEU TYR SEQRES 5 C 136 LEU ALA THR ALA HIS GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 6 C 136 LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA VAL ASP ALA SEQRES 7 C 136 ILE GLY PHE THR PRO LEU HIS LEU ALA ALA PHE ILE GLY SEQRES 8 C 136 HIS LEU GLU ILE ALA GLU VAL LEU LEU LYS HIS GLY ALA SEQRES 9 C 136 ASP VAL ASN ALA GLN ASP LYS PHE GLY LYS THR ALA PHE SEQRES 10 C 136 ASP ILE SER ILE GLY ASN GLY ASN GLU ASP LEU ALA GLU SEQRES 11 C 136 ILE LEU GLN LYS LEU ASN FORMUL 4 HOH *488(H2 O) HELIX 1 1 SER A 12 GLY A 25 1 14 HELIX 2 2 GLN A 26 ASN A 36 1 11 HELIX 3 3 THR A 49 GLY A 58 1 10 HELIX 4 4 HIS A 59 ASN A 69 1 11 HELIX 5 5 THR A 82 GLY A 91 1 10 HELIX 6 6 HIS A 92 HIS A 102 1 11 HELIX 7 7 THR A 115 ASN A 123 1 9 HELIX 8 8 ASN A 125 LEU A 135 1 11 HELIX 9 9 SER B 12 ALA B 24 1 13 HELIX 10 10 GLN B 26 ASN B 36 1 11 HELIX 11 11 THR B 49 HIS B 57 1 9 HELIX 12 12 HIS B 59 ASN B 69 1 11 HELIX 13 13 THR B 82 GLY B 91 1 10 HELIX 14 14 HIS B 92 HIS B 102 1 11 HELIX 15 15 THR B 115 ASN B 123 1 9 HELIX 16 16 ASN B 125 GLU B 130 1 6 HELIX 17 17 SER C 12 GLY C 25 1 14 HELIX 18 18 GLN C 26 ASN C 36 1 11 HELIX 19 19 THR C 49 GLY C 58 1 10 HELIX 20 20 HIS C 59 ASN C 69 1 11 HELIX 21 21 THR C 82 GLY C 91 1 10 HELIX 22 22 HIS C 92 HIS C 102 1 11 HELIX 23 23 THR C 115 ASN C 123 1 9 HELIX 24 24 ASN C 125 ASN C 136 1 12 CRYST1 152.080 52.191 70.164 90.00 105.19 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006575 0.000000 0.001785 0.00000 SCALE2 0.000000 0.019160 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014768 0.00000