HEADER TRANSFERASE 02-FEB-07 2JFL
TITLE CRYSTAL STRUCTURE OF HUMAN STE20-LIKE KINASE (DIPHOSPHORYLATED FORM)
TITLE 2 BOUND TO 5- AMINO-3-((4-(AMINOSULFONYL)PHENYL)AMINO)-N-(2,6-
TITLE 3 DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: STE20-LIKE SERINE/THREONINE-PROTEIN KINASE;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 19-320;
COMPND 5 SYNONYM: STE20-LIKE SERINE-THREONINE KINASE, STE20-LIKE KINASE,
COMPND 6 STE20-RELATED SERINE/THREONINE-PROTEIN KINASE, STE20-RELATED KINASE,
COMPND 7 HSLK, SERINE/THREONINE-PROTEIN KINASE 2, CTCL TUMOR ANTIGEN SE20-9;
COMPND 8 EC: 2.7.11.1;
COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4
KEYWDS TRANSFERASE, SERINE/THREONINE-PROTEIN KINASE, ATP-BINDING,
KEYWDS 2 PHOSPHORYLATION, MUSCLE DEVELOPMENT, KINASE, APOPTOSIS, GERMINAL
KEYWDS 3 CENTRE KINASE, SERINE- THREONINE KINASE 2, NUCLEOTIDE-BINDING,
KEYWDS 4 SERINE-THREONINE-PROTEIN KINASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.C.W.PIKE,P.RELLOS,O.FEDOROV,T.KEATES,E.SALAH,P.SAVITSKY,
AUTHOR 2 E.PAPAGRIGORIOU,G.BUNKOCZI,F.VON DELFT,C.H.ARROWSMITH,A.EDWARDS,
AUTHOR 3 J.WEIGELT,M.SUNDSTROM,S.KNAPP
REVDAT 7 20-NOV-24 2JFL 1 REMARK
REVDAT 6 13-DEC-23 2JFL 1 REMARK LINK
REVDAT 5 24-JAN-18 2JFL 1 AUTHOR
REVDAT 4 13-JUL-11 2JFL 1 VERSN
REVDAT 3 09-JUN-09 2JFL 1 REMARK
REVDAT 2 24-FEB-09 2JFL 1 VERSN
REVDAT 1 27-FEB-07 2JFL 0
JRNL AUTH A.C.W.PIKE,P.RELLOS,F.H.NIESEN,A.TURNBULL,A.W.OLIVER,
JRNL AUTH 2 S.A.PARKER,B.E.TURK,L.H.PEARL,S.KNAPP
JRNL TITL ACTIVATION SEGMENT DIMERIZATION: A MECHANISM FOR KINASE
JRNL TITL 2 AUTOPHOSPHORYLATION OF NON-CONSENSUS SITES.
JRNL REF EMBO J. V. 27 704 2008
JRNL REFN ISSN 0261-4189
JRNL PMID 18239682
JRNL DOI 10.1038/EMBOJ.2008.8
REMARK 2
REMARK 2 RESOLUTION. 2.20 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0019
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4
REMARK 3 NUMBER OF REFLECTIONS : 26523
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.205
REMARK 3 R VALUE (WORKING SET) : 0.203
REMARK 3 FREE R VALUE : 0.242
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900
REMARK 3 FREE R VALUE TEST SET COUNT : 1377
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1840
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.57
REMARK 3 BIN R VALUE (WORKING SET) : 0.3060
REMARK 3 BIN FREE R VALUE SET COUNT : 74
REMARK 3 BIN FREE R VALUE : 0.3410
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2274
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 52
REMARK 3 SOLVENT ATOMS : 146
REMARK 3
REMARK 3 B VALUES.
REMARK 3 B VALUE TYPE : LIKELY RESIDUAL
REMARK 3 FROM WILSON PLOT (A**2) : 49.90
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.55
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.06000
REMARK 3 B22 (A**2) : 0.06000
REMARK 3 B33 (A**2) : -0.09000
REMARK 3 B12 (A**2) : 0.03000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.175
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.166
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.975
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2371 ; 0.012 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 1567 ; 0.003 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3222 ; 1.548 ; 1.986
REMARK 3 BOND ANGLES OTHERS (DEGREES): 3833 ; 1.156 ; 3.001
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 287 ; 6.180 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;37.641 ;25.333
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 395 ;13.239 ;15.038
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;20.231 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 363 ; 0.081 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2598 ; 0.006 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 451 ; 0.008 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 452 ; 0.195 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1572 ; 0.192 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1137 ; 0.169 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): 1119 ; 0.093 ; 0.200
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 117 ; 0.138 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.267 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): 53 ; 0.296 ; 0.200
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.178 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1444 ; 0.529 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2337 ; 0.958 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 927 ; 1.594 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 885 ; 2.481 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 21 A 70
REMARK 3 ORIGIN FOR THE GROUP (A): -42.3650 49.8830 -6.5530
REMARK 3 T TENSOR
REMARK 3 T11: -0.3343 T22: 0.3050
REMARK 3 T33: 0.0382 T12: -0.0100
REMARK 3 T13: 0.1283 T23: -0.2040
REMARK 3 L TENSOR
REMARK 3 L11: 11.4561 L22: 4.8488
REMARK 3 L33: 5.2994 L12: -0.9552
REMARK 3 L13: 1.0130 L23: 0.5839
REMARK 3 S TENSOR
REMARK 3 S11: 0.2236 S12: 0.4098 S13: 0.7266
REMARK 3 S21: -0.6620 S22: -0.1031 S23: -0.2826
REMARK 3 S31: -0.3919 S32: -0.0883 S33: -0.1206
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 71 A 188
REMARK 3 ORIGIN FOR THE GROUP (A): -30.5870 37.7270 -5.2140
REMARK 3 T TENSOR
REMARK 3 T11: -0.3694 T22: 0.2382
REMARK 3 T33: -0.2074 T12: -0.1246
REMARK 3 T13: 0.0526 T23: -0.0927
REMARK 3 L TENSOR
REMARK 3 L11: 4.1970 L22: 1.7227
REMARK 3 L33: 2.5046 L12: -1.5163
REMARK 3 L13: -0.3402 L23: 0.5100
REMARK 3 S TENSOR
REMARK 3 S11: 0.1426 S12: -0.7317 S13: 0.3173
REMARK 3 S21: -0.0408 S22: -0.0991 S23: 0.1965
REMARK 3 S31: 0.1553 S32: -0.2844 S33: -0.0436
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 189 A 207
REMARK 3 ORIGIN FOR THE GROUP (A): -37.9190 4.6940 -8.9890
REMARK 3 T TENSOR
REMARK 3 T11: -0.0342 T22: -0.3677
REMARK 3 T33: -0.1999 T12: 0.0715
REMARK 3 T13: 0.0259 T23: 0.0482
REMARK 3 L TENSOR
REMARK 3 L11: 5.3811 L22: 14.8985
REMARK 3 L33: 6.1488 L12: 7.1879
REMARK 3 L13: 1.0969 L23: 1.2854
REMARK 3 S TENSOR
REMARK 3 S11: 0.4846 S12: -0.3606 S13: 0.6354
REMARK 3 S21: 0.3464 S22: -0.2283 S23: 0.8836
REMARK 3 S31: -0.2013 S32: 0.0224 S33: -0.2563
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 208 A 308
REMARK 3 ORIGIN FOR THE GROUP (A): -13.5920 32.7670 -9.3890
REMARK 3 T TENSOR
REMARK 3 T11: -0.3966 T22: 0.0860
REMARK 3 T33: -0.2290 T12: -0.0713
REMARK 3 T13: 0.0180 T23: -0.0672
REMARK 3 L TENSOR
REMARK 3 L11: 3.8302 L22: 2.3207
REMARK 3 L33: 3.5023 L12: 0.7516
REMARK 3 L13: 0.4545 L23: 1.1282
REMARK 3 S TENSOR
REMARK 3 S11: 0.0918 S12: -0.6120 S13: 0.1537
REMARK 3 S21: 0.1104 S22: 0.1282 S23: -0.2638
REMARK 3 S31: 0.1669 S32: 0.3824 S33: -0.2200
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS. PHOSPHO GROUPS ON THR183 AND SER189 HAVE BEEN
REMARK 3 MODELLED WITH OCCUPANCIES OF 0.7 AND 0.3 RESPECTIVELY. MASS SPEC
REMARK 3 INDICATES RATIO OF MONO-TO-DI PHOSPHORYLATION IS 70- 30
REMARK 4
REMARK 4 2JFL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-07.
REMARK 100 THE DEPOSITION ID IS D_1290031334.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 19-OCT-06
REMARK 200 TEMPERATURE (KELVIN) : 100.0
REMARK 200 PH : 6.50
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SLS
REMARK 200 BEAMLINE : X10SA
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27969
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200
REMARK 200 RESOLUTION RANGE LOW (A) : 49.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5
REMARK 200 DATA REDUNDANCY : 5.900
REMARK 200 R MERGE (I) : 0.09000
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32
REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3
REMARK 200 DATA REDUNDANCY IN SHELL : 4.10
REMARK 200 R MERGE FOR SHELL (I) : 0.71000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: PDB ENTRY 2J51
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 65.10
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG3350,10% ETHYLENE GLYCOL, 0.15
REMARK 280 KSCN, 0.1M BISTRIS PROPANE PH6.5, PH 6.50
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+5/6
REMARK 290 6555 X-Y,X,Z+1/6
REMARK 290 7555 Y,X,-Z+1/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+2/3
REMARK 290 10555 -Y,-X,-Z+5/6
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+1/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.07933
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.15867
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.61900
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 147.69833
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.53967
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.07933
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 118.15867
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 147.69833
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 88.61900
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.53967
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PQS
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000
REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -29.53967
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A2101 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -4
REMARK 465 HIS A -3
REMARK 465 HIS A -2
REMARK 465 HIS A -1
REMARK 465 HIS A 0
REMARK 465 HIS A 1
REMARK 465 HIS A 2
REMARK 465 SER A 3
REMARK 465 SER A 4
REMARK 465 GLY A 5
REMARK 465 VAL A 6
REMARK 465 ASP A 7
REMARK 465 LEU A 8
REMARK 465 GLY A 9
REMARK 465 THR A 10
REMARK 465 GLU A 11
REMARK 465 ASN A 12
REMARK 465 LEU A 13
REMARK 465 TYR A 14
REMARK 465 PHE A 15
REMARK 465 GLN A 16
REMARK 465 SER A 17
REMARK 465 MET A 18
REMARK 465 LYS A 19
REMARK 465 GLN A 20
REMARK 465 ALA A 309
REMARK 465 GLU A 310
REMARK 465 VAL A 311
REMARK 465 THR A 312
REMARK 465 GLU A 313
REMARK 465 GLU A 314
REMARK 465 VAL A 315
REMARK 465 GLU A 316
REMARK 465 ASP A 317
REMARK 465 GLY A 318
REMARK 465 LYS A 319
REMARK 465 GLU A 320
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 22 CG CD OE1 OE2
REMARK 470 ARG A 26 NE CZ NH1 NH2
REMARK 470 PHE A 45 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 LYS A 68 CG CD CE NZ
REMARK 470 GLU A 71 CG CD OE1 OE2
REMARK 470 GLU A 122 CG CD OE1 OE2
REMARK 470 ARG A 182 CZ NH1 NH2
REMARK 470 ILE A 184 CD1
REMARK 470 GLN A 185 CD OE1 NE2
REMARK 470 LYS A 208 CD CE NZ
REMARK 470 LYS A 270 CD CE NZ
REMARK 470 LYS A 298 CE NZ
REMARK 470 ILE A 304 CD1
REMARK 470 LYS A 308 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 42 113.66 -169.58
REMARK 500 ARG A 154 -2.17 76.60
REMARK 500 ASP A 155 44.66 -145.43
REMARK 500 ASP A 173 81.29 59.50
REMARK 500 ILE A 231 -49.40 70.62
REMARK 500 ASP A 295 26.35 -144.54
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2011 DISTANCE = 6.24 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN A 1315
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1316
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DKI A 1309
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1310
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1311
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1312
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1313
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1314
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2J51 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN STE20-LIKE KINASE BOUND TO 5-AMINO-3-((4-
REMARK 900 (AMINOSULFONYL) PHENYL)AMINO) -N-(2,6-DIFLUOROPHENYL)-1H-1 ,2,4-
REMARK 900 TRIAZOLE-1-CARBOTHIOAMIDE
REMARK 900 RELATED ID: 2JA0 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN STE20-LIKE KINASE BOUND TO 4-(4-(5-
REMARK 900 CYCLOPROPYL-1H-PYRAZOL -3-YLAMINO)-QUINAZOLIN-2-YLAMINO)-
REMARK 900 BENZONITRILE
REMARK 900 RELATED ID: 2JFM RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN STE20-LIKE KINASE (UNLIGANDED FORM)
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 K25T MUTATION DUE TO CLONING ARTIFACT
DBREF 2JFL A -4 18 PDB 2JFL 2JFL -4 18
DBREF 2JFL A 19 320 UNP Q9H2G2 SLK_HUMAN 19 320
SEQADV 2JFL THR A 25 UNP Q9H2G2 LYS 25 CONFLICT
SEQRES 1 A 325 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU
SEQRES 2 A 325 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS GLN TYR
SEQRES 3 A 325 GLU HIS VAL THR ARG ASP LEU ASN PRO GLU ASP PHE TRP
SEQRES 4 A 325 GLU ILE ILE GLY GLU LEU GLY ASP GLY ALA PHE GLY LYS
SEQRES 5 A 325 VAL TYR LYS ALA GLN ASN LYS GLU THR SER VAL LEU ALA
SEQRES 6 A 325 ALA ALA LYS VAL ILE ASP THR LYS SER GLU GLU GLU LEU
SEQRES 7 A 325 GLU ASP TYR MET VAL GLU ILE ASP ILE LEU ALA SER CYS
SEQRES 8 A 325 ASP HIS PRO ASN ILE VAL LYS LEU LEU ASP ALA PHE TYR
SEQRES 9 A 325 TYR GLU ASN ASN LEU TRP ILE LEU ILE GLU PHE CYS ALA
SEQRES 10 A 325 GLY GLY ALA VAL ASP ALA VAL MET LEU GLU LEU GLU ARG
SEQRES 11 A 325 PRO LEU THR GLU SER GLN ILE GLN VAL VAL CYS LYS GLN
SEQRES 12 A 325 THR LEU ASP ALA LEU ASN TYR LEU HIS ASP ASN LYS ILE
SEQRES 13 A 325 ILE HIS ARG ASP LEU LYS ALA GLY ASN ILE LEU PHE THR
SEQRES 14 A 325 LEU ASP GLY ASP ILE LYS LEU ALA ASP PHE GLY VAL SER
SEQRES 15 A 325 ALA LYS ASN THR ARG TPO ILE GLN ARG ARG ASP SEP PHE
SEQRES 16 A 325 ILE GLY THR PRO TYR TRP MET ALA PRO GLU VAL VAL MET
SEQRES 17 A 325 CYS GLU THR SER LYS ASP ARG PRO TYR ASP TYR LYS ALA
SEQRES 18 A 325 ASP VAL TRP SER LEU GLY ILE THR LEU ILE GLU MET ALA
SEQRES 19 A 325 GLU ILE GLU PRO PRO HIS HIS GLU LEU ASN PRO MET ARG
SEQRES 20 A 325 VAL LEU LEU LYS ILE ALA LYS SER GLU PRO PRO THR LEU
SEQRES 21 A 325 ALA GLN PRO SER ARG TRP SER SER ASN PHE LYS ASP PHE
SEQRES 22 A 325 LEU LYS LYS CYS LEU GLU LYS ASN VAL ASP ALA ARG TRP
SEQRES 23 A 325 THR THR SER GLN LEU LEU GLN HIS PRO PHE VAL THR VAL
SEQRES 24 A 325 ASP SER ASN LYS PRO ILE ARG GLU LEU ILE ALA GLU ALA
SEQRES 25 A 325 LYS ALA GLU VAL THR GLU GLU VAL GLU ASP GLY LYS GLU
MODRES 2JFL TPO A 183 THR PHOSPHOTHREONINE
MODRES 2JFL SEP A 189 SER PHOSPHOSERINE
HET TPO A 183 11
HET SEP A 189 10
HET DKI A1309 28
HET EDO A1310 4
HET EDO A1311 4
HET EDO A1312 4
HET EDO A1313 4
HET EDO A1314 4
HET SCN A1315 3
HET CL A1316 1
HETNAM TPO PHOSPHOTHREONINE
HETNAM SEP PHOSPHOSERINE
HETNAM DKI 5-AMINO-3-{[4-(AMINOSULFONYL)PHENYL]AMINO}-N-(2,6-
HETNAM 2 DKI DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE
HETNAM EDO 1,2-ETHANEDIOL
HETNAM SCN THIOCYANATE ION
HETNAM CL CHLORIDE ION
HETSYN TPO PHOSPHONOTHREONINE
HETSYN SEP PHOSPHONOSERINE
HETSYN DKI CDK 1/2 INHIBITOR
HETSYN EDO ETHYLENE GLYCOL
FORMUL 1 TPO C4 H10 N O6 P
FORMUL 1 SEP C3 H8 N O6 P
FORMUL 2 DKI C15 H13 F2 N7 O2 S2
FORMUL 3 EDO 5(C2 H6 O2)
FORMUL 8 SCN C N S 1-
FORMUL 9 CL CL 1-
FORMUL 10 HOH *146(H2 O)
HELIX 1 1 ASN A 29 ASP A 32 5 4
HELIX 2 2 GLU A 72 CYS A 86 1 15
HELIX 3 3 VAL A 116 GLU A 124 1 9
HELIX 4 4 THR A 128 ASN A 149 1 22
HELIX 5 5 LYS A 157 GLY A 159 5 3
HELIX 6 6 ASN A 180 ASP A 188 1 9
HELIX 7 7 ALA A 198 MET A 203 1 6
HELIX 8 8 TYR A 214 ILE A 231 1 18
HELIX 9 9 ASN A 239 MET A 241 5 3
HELIX 10 10 ARG A 242 SER A 250 1 9
HELIX 11 11 GLN A 257 TRP A 261 5 5
HELIX 12 12 SER A 262 LEU A 273 1 12
HELIX 13 13 THR A 282 LEU A 287 1 6
HELIX 14 14 GLN A 288 THR A 293 5 6
HELIX 15 15 ASN A 297 ALA A 307 1 11
SHEET 1 AA 6 THR A 25 ARG A 26 0
SHEET 2 AA 6 LEU A 94 TYR A 100 1 O ALA A 97 N THR A 25
SHEET 3 AA 6 ASN A 103 GLU A 109 -1 O ASN A 103 N TYR A 100
SHEET 4 AA 6 LEU A 59 ASP A 66 -1 O ALA A 61 N ILE A 108
SHEET 5 AA 6 GLY A 46 ASN A 53 -1 O LYS A 47 N VAL A 64
SHEET 6 AA 6 TRP A 34 GLY A 43 -1 O GLU A 35 N GLN A 52
SHEET 1 AB 3 GLY A 114 ALA A 115 0
SHEET 2 AB 3 ILE A 161 PHE A 163 -1 N PHE A 163 O GLY A 114
SHEET 3 AB 3 ILE A 169 LEU A 171 -1 O LYS A 170 N LEU A 162
SHEET 1 AC 2 ILE A 151 ILE A 152 0
SHEET 2 AC 2 ALA A 178 LYS A 179 -1 O ALA A 178 N ILE A 152
LINK C ARG A 182 N TPO A 183 1555 1555 1.35
LINK C TPO A 183 N ILE A 184 1555 1555 1.34
LINK C ASP A 188 N SEP A 189 1555 1555 1.33
LINK C SEP A 189 N PHE A 190 1555 1555 1.33
SITE 1 AC1 1 ARG A 242
SITE 1 AC2 1 DKI A1309
SITE 1 AC3 13 LEU A 40 VAL A 48 ALA A 61 ILE A 108
SITE 2 AC3 13 GLU A 109 PHE A 110 CYS A 111 GLY A 114
SITE 3 AC3 13 GLY A 159 ASN A 160 LEU A 162 CL A1316
SITE 4 AC3 13 HOH A2145
SITE 1 AC4 6 HIS A 147 PRO A 211 TYR A 214 THR A 282
SITE 2 AC4 6 THR A 283 EDO A1312
SITE 1 AC5 7 VAL A 134 LYS A 137 GLN A 138 VAL A 294
SITE 2 AC5 7 SER A 296 ASN A 297 HOH A2146
SITE 1 AC6 4 HIS A 147 LYS A 150 ASP A 209 EDO A1310
SITE 1 AC7 3 PRO A 89 ASN A 90 HOH A2048
SITE 1 AC8 6 ASP A 155 LYS A 157 ILE A 191 GLY A 192
SITE 2 AC8 6 THR A 193 PRO A 194
CRYST1 101.368 101.368 177.238 90.00 90.00 120.00 P 61 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009865 0.005696 0.000000 0.00000
SCALE2 0.000000 0.011391 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005642 0.00000