HEADER IMMUNE SYSTEM 09-FEB-07 2JG8 TITLE CRYSTALLOGRAPHIC STRUCTURE OF HUMAN C1Q GLOBULAR HEADS COMPLEXED TO TITLE 2 PHOSPHATIDYL-SERINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT C1Q SUBCOMPONENT SUBUNIT A; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: C-TERMINAL GLOBULAR REGION, RESIDUES 112-245; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COMPLEMENT C1Q SUBCOMPONENT SUBUNIT B; COMPND 7 CHAIN: B, E; COMPND 8 FRAGMENT: C TERMINAL GLOBULAR DOMAIN, RESIDUES 116-251; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: COMPLEMENT C1Q SUBCOMPONENT SUBUNIT C; COMPND 11 CHAIN: C, F; COMPND 12 FRAGMENT: C TERMINAL GLOBULAR DOMAIN, RESIDUES 115-245 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS POLYMORPHISM, GLYCOPROTEIN, PHAGOCYTOSIS, DISEASE MUTATION, KEYWDS 2 COMPLEMENT PATHWAY, IMMUNE SYSTEM, CELL SURFACE MOLECULE, KEYWDS 3 PYRROLIDONE CARBOXYLIC ACID, HYDROXYLATION, INNATE IMMUNITY, IMMUNE KEYWDS 4 RESPONSE, COLLAGEN, TOLERANCE, APOPOTOSIS, COMPLEMENT EXPDTA X-RAY DIFFRACTION AUTHOR H.PAIDASSI,P.TACNET-DELORME,V.GARLATTI,C.DARNAULT,B.GHEBREHIWET, AUTHOR 2 C.GABORIAUD,G.J.ARLAUD,P.FRACHET REVDAT 5 13-DEC-23 2JG8 1 REMARK HETSYN REVDAT 4 29-JUL-20 2JG8 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 05-DEC-18 2JG8 1 COMPND SOURCE JRNL REMARK REVDAT 3 2 1 DBREF REVDAT 2 24-FEB-09 2JG8 1 VERSN REVDAT 1 19-FEB-08 2JG8 0 JRNL AUTH H.PAIDASSI,P.TACNET-DELORME,V.GARLATTI,C.DARNAULT, JRNL AUTH 2 B.GHEBREHIWET,C.GABORIAUD,G.J.ARLAUD,P.FRACHET JRNL TITL C1Q BINDS PHOSPHATIDYLSERINE AND LIKELY ACTS AS A JRNL TITL 2 MULTILIGAND-BRIDGING MOLECULE IN APOPTOTIC CELL RECOGNITION. JRNL REF J.IMMUNOL. V. 180 2329 2008 JRNL REFN ISSN 0022-1767 JRNL PMID 18250442 JRNL DOI 10.4049/JIMMUNOL.180.4.2329 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1948 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2349 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1840 REMARK 3 BIN FREE R VALUE SET COUNT : 123 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6239 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 302 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.55000 REMARK 3 B22 (A**2) : -0.95000 REMARK 3 B33 (A**2) : 1.47000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : -0.10000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.294 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.894 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6403 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8703 ; 1.028 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 781 ; 6.184 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 297 ;36.445 ;23.973 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 990 ;13.649 ;15.015 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;13.364 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 961 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4954 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2951 ; 0.231 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4296 ; 0.324 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 739 ; 0.230 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.269 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.226 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4036 ; 0.812 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6404 ; 1.286 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2652 ; 1.176 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2299 ; 1.553 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JG8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290031358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 19.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 200 DATA REDUNDANCY : 1.920 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1PK6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 6810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 223 REMARK 465 GLU B 225 REMARK 465 ALA B 226 REMARK 465 ALA D 223 REMARK 465 ALA E 91 REMARK 465 GLU E 225 REMARK 465 ALA E 226 REMARK 465 LYS F 87 REMARK 465 GLN F 88 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 108 CG CD NE CZ NH1 NH2 REMARK 470 MET B 224 CA C O CB CG SD CE REMARK 470 ARG E 108 CG CD NE CZ NH1 NH2 REMARK 470 MET E 224 CA C O CB CG SD CE REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 90 CG CD OE1 NE2 REMARK 480 ARG A 92 CA CB CG CD NE CZ NH1 REMARK 480 ARG A 92 NH2 REMARK 480 GLN A 160 CG CD OE1 NE2 REMARK 480 GLN B 93 CA C CB CG CD OE1 NE2 REMARK 480 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 129 CA CB CG CD NE CZ NH1 REMARK 480 ARG B 129 NH2 REMARK 480 SER B 149 OG REMARK 480 ARG B 150 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 163 CG CD NE CZ NH1 NH2 REMARK 480 GLN B 165 CG CD OE1 NE2 REMARK 480 TYR B 175 CA CB CG CD1 CD2 CE1 CE2 REMARK 480 TYR B 175 CZ OH REMARK 480 ASP B 201 CA CB CG OD1 OD2 REMARK 480 LYS C 87 CA CB CG CD CE NZ REMARK 480 LYS C 170 CA CB CG CD CE NZ REMARK 480 GLN D 90 CG CD OE1 NE2 REMARK 480 ARG D 92 CG CD NE CZ NH1 NH2 REMARK 480 VAL D 109 CA CB CG1 CG2 REMARK 480 LYS D 201 CA CB CG CD CE NZ REMARK 480 GLN E 93 CA C CB CG CD OE1 NE2 REMARK 480 ASN E 104 CA CB CG OD1 ND2 REMARK 480 ARG E 109 CG CD NE CZ NH1 NH2 REMARK 480 SER E 149 OG REMARK 480 ARG E 150 CG CD NE CZ NH1 NH2 REMARK 480 ARG E 163 CG CD NE CZ NH1 NH2 REMARK 480 GLN E 165 CG CD OE1 NE2 REMARK 480 GLU E 209 CA CB CG CD OE1 OE2 REMARK 480 LYS F 89 CG CD CE NZ REMARK 480 SER F 92 CA CB OG REMARK 480 GLN F 102 CA CB CG CD OE1 NE2 REMARK 480 GLN F 184 CA CB CG CD OE1 NE2 REMARK 480 GLN F 203 CA CB CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN E 93 O HOH E 2002 1.66 REMARK 500 O GLN E 93 N LYS E 94 1.69 REMARK 500 N THR E 92 O HOH E 2001 1.99 REMARK 500 NE ARG C 111 O THR C 125 2.01 REMARK 500 OE2 GLU B 162 O HOH B 2019 2.02 REMARK 500 CG GLN D 160 N SEP D 1223 2.04 REMARK 500 O LEU D 165 O HOH D 2031 2.09 REMARK 500 NH2 ARG B 161 OE1 GLU B 190 2.15 REMARK 500 OD1 ASP C 217 O HOH C 2060 2.17 REMARK 500 NE ARG C 182 O HOH C 2060 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG B 163 CB THR D 113 1554 0.57 REMARK 500 OE2 GLU A 148 NZ LYS C 87 1445 0.78 REMARK 500 CD GLU A 148 NZ LYS C 87 1445 0.82 REMARK 500 CZ ARG B 163 CG2 THR D 113 1554 1.20 REMARK 500 NH2 ARG B 163 OG1 THR D 113 1554 1.31 REMARK 500 NH1 ARG B 163 CG2 THR D 113 1554 1.37 REMARK 500 NH2 ARG B 163 CG2 THR D 113 1554 1.61 REMARK 500 CZ ARG B 163 CB THR D 113 1554 1.61 REMARK 500 OE1 GLU A 148 NZ LYS C 87 1445 1.62 REMARK 500 OE2 GLU A 148 CE LYS C 87 1445 1.69 REMARK 500 CZ ARG B 163 OG1 THR D 113 1554 1.78 REMARK 500 NH2 ARG B 163 CA THR D 113 1554 2.10 REMARK 500 N ASN A 117 NH2 ARG E 163 1554 2.11 REMARK 500 CG GLU A 148 NZ LYS C 87 1445 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 90 CB GLN A 90 CG 0.505 REMARK 500 ARG A 92 N ARG A 92 CA 0.515 REMARK 500 GLN B 93 N GLN B 93 CA 0.215 REMARK 500 GLN B 93 C GLN B 93 O -0.325 REMARK 500 GLN B 93 C LYS B 94 N 0.171 REMARK 500 ARG B 109 CB ARG B 109 CG -0.738 REMARK 500 ARG B 129 N ARG B 129 CA 0.121 REMARK 500 SER B 149 CB SER B 149 OG -0.272 REMARK 500 ARG B 150 CB ARG B 150 CG -0.258 REMARK 500 TYR B 175 N TYR B 175 CA 0.204 REMARK 500 TYR B 175 CA TYR B 175 C 0.189 REMARK 500 ASP B 201 N ASP B 201 CA 0.126 REMARK 500 ASP B 201 CA ASP B 201 C 0.194 REMARK 500 LYS C 87 N LYS C 87 CA 0.338 REMARK 500 LYS C 87 CA LYS C 87 C 0.162 REMARK 500 VAL D 109 N VAL D 109 CA -0.136 REMARK 500 GLN E 93 N GLN E 93 CA 1.519 REMARK 500 GLN E 93 C GLN E 93 O -0.412 REMARK 500 GLN E 93 C LYS E 94 N -0.270 REMARK 500 ASN E 104 CA ASN E 104 C 0.388 REMARK 500 ARG E 109 CB ARG E 109 CG -0.649 REMARK 500 SER E 149 CB SER E 149 OG -0.270 REMARK 500 ARG E 150 CB ARG E 150 CG -0.262 REMARK 500 ARG E 163 CB ARG E 163 CG 0.307 REMARK 500 LYS F 89 CB LYS F 89 CG -0.387 REMARK 500 GLN F 102 CA GLN F 102 C 0.230 REMARK 500 GLN F 203 CA GLN F 203 C 0.212 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 90 CA - CB - CG ANGL. DEV. = 21.7 DEGREES REMARK 500 GLN A 90 CB - CG - CD ANGL. DEV. = 20.0 DEGREES REMARK 500 ARG A 92 CA - C - O ANGL. DEV. = -19.9 DEGREES REMARK 500 GLN A 160 CB - CG - CD ANGL. DEV. = -20.6 DEGREES REMARK 500 GLN B 93 CA - C - O ANGL. DEV. = -31.4 DEGREES REMARK 500 GLN B 93 CA - C - N ANGL. DEV. = 18.0 DEGREES REMARK 500 GLN B 93 O - C - N ANGL. DEV. = -17.1 DEGREES REMARK 500 LYS B 94 C - N - CA ANGL. DEV. = 30.0 DEGREES REMARK 500 ARG B 150 CA - CB - CG ANGL. DEV. = 24.2 DEGREES REMARK 500 ARG B 163 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG B 163 CB - CG - CD ANGL. DEV. = -33.5 DEGREES REMARK 500 TYR B 175 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 TYR B 175 CA - C - O ANGL. DEV. = -50.7 DEGREES REMARK 500 TYR B 175 CA - C - N ANGL. DEV. = 42.8 DEGREES REMARK 500 ASP B 201 CA - C - O ANGL. DEV. = 21.4 DEGREES REMARK 500 ASP B 201 CA - C - N ANGL. DEV. = -22.2 DEGREES REMARK 500 LYS C 87 CA - C - O ANGL. DEV. = 14.5 DEGREES REMARK 500 LYS C 87 CA - C - N ANGL. DEV. = -15.7 DEGREES REMARK 500 LYS C 170 CA - C - O ANGL. DEV. = -16.3 DEGREES REMARK 500 GLN D 90 CA - CB - CG ANGL. DEV. = 16.9 DEGREES REMARK 500 ARG D 92 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 GLN E 93 C - N - CA ANGL. DEV. = -49.0 DEGREES REMARK 500 GLN E 93 CA - C - O ANGL. DEV. = -20.8 DEGREES REMARK 500 GLN E 93 CA - C - N ANGL. DEV. = 15.0 DEGREES REMARK 500 ASN E 104 CA - C - O ANGL. DEV. = -34.0 DEGREES REMARK 500 ASN E 104 CA - C - N ANGL. DEV. = -16.5 DEGREES REMARK 500 ARG E 150 CA - CB - CG ANGL. DEV. = 24.0 DEGREES REMARK 500 ARG E 163 CB - CG - CD ANGL. DEV. = -39.2 DEGREES REMARK 500 GLU E 209 N - CA - C ANGL. DEV. = 22.3 DEGREES REMARK 500 GLU E 209 CA - C - O ANGL. DEV. = -44.9 DEGREES REMARK 500 GLU E 209 CA - C - N ANGL. DEV. = 39.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 100 -46.42 -155.86 REMARK 500 ARG A 100 -45.35 -155.86 REMARK 500 MET A 104 -169.06 -77.75 REMARK 500 ASN A 117 68.13 -153.69 REMARK 500 GLU A 119 2.81 81.79 REMARK 500 TRP A 147 -102.15 -126.20 REMARK 500 SER A 164 -154.51 -147.18 REMARK 500 THR B 92 -63.77 -132.47 REMARK 500 GLN B 93 42.67 -72.60 REMARK 500 LYS B 94 82.62 -48.71 REMARK 500 ASN B 104 31.20 -97.48 REMARK 500 ASP B 110 -1.09 76.41 REMARK 500 ASN B 121 56.87 -159.66 REMARK 500 ASN B 123 -4.84 81.60 REMARK 500 ARG B 161 -108.52 -91.12 REMARK 500 ARG B 161 -108.10 -91.12 REMARK 500 TYR B 175 46.63 -59.11 REMARK 500 ASN B 176 45.58 81.09 REMARK 500 THR B 177 148.43 -177.23 REMARK 500 ASP B 201 -59.02 -18.76 REMARK 500 ALA B 211 80.00 -158.49 REMARK 500 ASN C 118 55.45 -170.25 REMARK 500 LYS C 170 -17.47 60.36 REMARK 500 ASN C 194 -129.75 -111.00 REMARK 500 ARG D 100 -24.99 -164.71 REMARK 500 ARG D 100 -74.36 -147.71 REMARK 500 ASN D 101 52.94 -149.80 REMARK 500 ASN D 101 63.60 -116.81 REMARK 500 MET D 104 -151.49 -95.87 REMARK 500 MET D 104 -149.55 -95.12 REMARK 500 ASN D 117 61.27 -165.24 REMARK 500 GLU D 119 -3.30 78.24 REMARK 500 GLU D 119 -0.77 77.43 REMARK 500 TRP D 147 -102.61 -125.48 REMARK 500 SER D 164 -156.47 -151.49 REMARK 500 LYS D 201 83.32 -158.40 REMARK 500 ASN E 104 58.79 -104.81 REMARK 500 ASN E 121 57.01 -162.84 REMARK 500 ASN E 123 -5.79 82.75 REMARK 500 ARG E 161 -112.89 -100.65 REMARK 500 GLU E 209 67.11 -13.39 REMARK 500 ALA E 211 71.43 -160.74 REMARK 500 ASN F 118 58.35 -172.64 REMARK 500 LYS F 170 -48.48 78.81 REMARK 500 ASN F 194 -133.87 -107.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU E 209 GLY E 210 -145.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 92 25.84 REMARK 500 GLN B 93 44.05 REMARK 500 TYR B 175 42.41 REMARK 500 LYS C 170 -23.51 REMARK 500 ASN E 104 34.40 REMARK 500 GLU E 209 34.10 REMARK 500 GLN F 102 -21.57 REMARK 500 GLN F 203 13.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SEP D 1223 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1224 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 177 OE1 REMARK 620 2 ASP B 172 OD2 97.1 REMARK 620 3 TYR B 173 O 94.7 100.0 REMARK 620 4 GLN B 179 OE1 168.1 74.9 95.4 REMARK 620 5 HOH C2044 O 88.1 165.4 93.1 97.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E1224 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN D 177 OE1 REMARK 620 2 ASP E 172 OD2 93.5 REMARK 620 3 TYR E 173 O 83.4 99.3 REMARK 620 4 GLN E 179 OE1 170.8 77.9 100.7 REMARK 620 5 HOH F2044 O 86.2 176.6 84.1 102.3 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JG9 RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC STRUCTURE OF HUMAN C1Q GLOBULAR HEADS (P1) REMARK 900 RELATED ID: 1PK6 RELATED DB: PDB REMARK 900 GLOBULAR HEAD OF THE COMPLEMENT SYSTEM PROTEIN C1Q DBREF 2JG8 A 90 223 UNP P02745 C1QA_HUMAN 112 245 DBREF 2JG8 B 91 226 UNP P02746 C1QB_HUMAN 118 253 DBREF 2JG8 C 87 217 UNP P02747 C1QC_HUMAN 115 245 DBREF 2JG8 D 90 223 UNP P02745 C1QA_HUMAN 112 245 DBREF 2JG8 E 91 226 UNP P02746 C1QB_HUMAN 118 253 DBREF 2JG8 F 87 217 UNP P02747 C1QC_HUMAN 115 245 SEQRES 1 A 134 GLN PRO ARG PRO ALA PHE SER ALA ILE ARG ARG ASN PRO SEQRES 2 A 134 PRO MET GLY GLY ASN VAL VAL ILE PHE ASP THR VAL ILE SEQRES 3 A 134 THR ASN GLN GLU GLU PRO TYR GLN ASN HIS SER GLY ARG SEQRES 4 A 134 PHE VAL CYS THR VAL PRO GLY TYR TYR TYR PHE THR PHE SEQRES 5 A 134 GLN VAL LEU SER GLN TRP GLU ILE CYS LEU SER ILE VAL SEQRES 6 A 134 SER SER SER ARG GLY GLN VAL ARG ARG SER LEU GLY PHE SEQRES 7 A 134 CYS ASP THR THR ASN LYS GLY LEU PHE GLN VAL VAL SER SEQRES 8 A 134 GLY GLY MET VAL LEU GLN LEU GLN GLN GLY ASP GLN VAL SEQRES 9 A 134 TRP VAL GLU LYS ASP PRO LYS LYS GLY HIS ILE TYR GLN SEQRES 10 A 134 GLY SER GLU ALA ASP SER VAL PHE SER GLY PHE LEU ILE SEQRES 11 A 134 PHE PRO SER ALA SEQRES 1 B 136 ALA THR GLN LYS ILE ALA PHE SER ALA THR ARG THR ILE SEQRES 2 B 136 ASN VAL PRO LEU ARG ARG ASP GLN THR ILE ARG PHE ASP SEQRES 3 B 136 HIS VAL ILE THR ASN MET ASN ASN ASN TYR GLU PRO ARG SEQRES 4 B 136 SER GLY LYS PHE THR CYS LYS VAL PRO GLY LEU TYR TYR SEQRES 5 B 136 PHE THR TYR HIS ALA SER SER ARG GLY ASN LEU CYS VAL SEQRES 6 B 136 ASN LEU MET ARG GLY ARG GLU ARG ALA GLN LYS VAL VAL SEQRES 7 B 136 THR PHE CYS ASP TYR ALA TYR ASN THR PHE GLN VAL THR SEQRES 8 B 136 THR GLY GLY MET VAL LEU LYS LEU GLU GLN GLY GLU ASN SEQRES 9 B 136 VAL PHE LEU GLN ALA THR ASP LYS ASN SER LEU LEU GLY SEQRES 10 B 136 MET GLU GLY ALA ASN SER ILE PHE SER GLY PHE LEU LEU SEQRES 11 B 136 PHE PRO ASP MET GLU ALA SEQRES 1 C 131 LYS GLN LYS PHE GLN SER VAL PHE THR VAL THR ARG GLN SEQRES 2 C 131 THR HIS GLN PRO PRO ALA PRO ASN SER LEU ILE ARG PHE SEQRES 3 C 131 ASN ALA VAL LEU THR ASN PRO GLN GLY ASP TYR ASP THR SEQRES 4 C 131 SER THR GLY LYS PHE THR CYS LYS VAL PRO GLY LEU TYR SEQRES 5 C 131 TYR PHE VAL TYR HIS ALA SER HIS THR ALA ASN LEU CYS SEQRES 6 C 131 VAL LEU LEU TYR ARG SER GLY VAL LYS VAL VAL THR PHE SEQRES 7 C 131 CYS GLY HIS THR SER LYS THR ASN GLN VAL ASN SER GLY SEQRES 8 C 131 GLY VAL LEU LEU ARG LEU GLN VAL GLY GLU GLU VAL TRP SEQRES 9 C 131 LEU ALA VAL ASN ASP TYR TYR ASP MET VAL GLY ILE GLN SEQRES 10 C 131 GLY SER ASP SER VAL PHE SER GLY PHE LEU LEU PHE PRO SEQRES 11 C 131 ASP SEQRES 1 D 134 GLN PRO ARG PRO ALA PHE SER ALA ILE ARG ARG ASN PRO SEQRES 2 D 134 PRO MET GLY GLY ASN VAL VAL ILE PHE ASP THR VAL ILE SEQRES 3 D 134 THR ASN GLN GLU GLU PRO TYR GLN ASN HIS SER GLY ARG SEQRES 4 D 134 PHE VAL CYS THR VAL PRO GLY TYR TYR TYR PHE THR PHE SEQRES 5 D 134 GLN VAL LEU SER GLN TRP GLU ILE CYS LEU SER ILE VAL SEQRES 6 D 134 SER SER SER ARG GLY GLN VAL ARG ARG SER LEU GLY PHE SEQRES 7 D 134 CYS ASP THR THR ASN LYS GLY LEU PHE GLN VAL VAL SER SEQRES 8 D 134 GLY GLY MET VAL LEU GLN LEU GLN GLN GLY ASP GLN VAL SEQRES 9 D 134 TRP VAL GLU LYS ASP PRO LYS LYS GLY HIS ILE TYR GLN SEQRES 10 D 134 GLY SER GLU ALA ASP SER VAL PHE SER GLY PHE LEU ILE SEQRES 11 D 134 PHE PRO SER ALA SEQRES 1 E 136 ALA THR GLN LYS ILE ALA PHE SER ALA THR ARG THR ILE SEQRES 2 E 136 ASN VAL PRO LEU ARG ARG ASP GLN THR ILE ARG PHE ASP SEQRES 3 E 136 HIS VAL ILE THR ASN MET ASN ASN ASN TYR GLU PRO ARG SEQRES 4 E 136 SER GLY LYS PHE THR CYS LYS VAL PRO GLY LEU TYR TYR SEQRES 5 E 136 PHE THR TYR HIS ALA SER SER ARG GLY ASN LEU CYS VAL SEQRES 6 E 136 ASN LEU MET ARG GLY ARG GLU ARG ALA GLN LYS VAL VAL SEQRES 7 E 136 THR PHE CYS ASP TYR ALA TYR ASN THR PHE GLN VAL THR SEQRES 8 E 136 THR GLY GLY MET VAL LEU LYS LEU GLU GLN GLY GLU ASN SEQRES 9 E 136 VAL PHE LEU GLN ALA THR ASP LYS ASN SER LEU LEU GLY SEQRES 10 E 136 MET GLU GLY ALA ASN SER ILE PHE SER GLY PHE LEU LEU SEQRES 11 E 136 PHE PRO ASP MET GLU ALA SEQRES 1 F 131 LYS GLN LYS PHE GLN SER VAL PHE THR VAL THR ARG GLN SEQRES 2 F 131 THR HIS GLN PRO PRO ALA PRO ASN SER LEU ILE ARG PHE SEQRES 3 F 131 ASN ALA VAL LEU THR ASN PRO GLN GLY ASP TYR ASP THR SEQRES 4 F 131 SER THR GLY LYS PHE THR CYS LYS VAL PRO GLY LEU TYR SEQRES 5 F 131 TYR PHE VAL TYR HIS ALA SER HIS THR ALA ASN LEU CYS SEQRES 6 F 131 VAL LEU LEU TYR ARG SER GLY VAL LYS VAL VAL THR PHE SEQRES 7 F 131 CYS GLY HIS THR SER LYS THR ASN GLN VAL ASN SER GLY SEQRES 8 F 131 GLY VAL LEU LEU ARG LEU GLN VAL GLY GLU GLU VAL TRP SEQRES 9 F 131 LEU ALA VAL ASN ASP TYR TYR ASP MET VAL GLY ILE GLN SEQRES 10 F 131 GLY SER ASP SER VAL PHE SER GLY PHE LEU LEU PHE PRO SEQRES 11 F 131 ASP HET NAG A1223 15 HET CA B1224 1 HET SEP D1223 10 HET CA E1224 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM SEP PHOSPHOSERINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN SEP PHOSPHONOSERINE FORMUL 7 NAG C8 H15 N O6 FORMUL 8 CA 2(CA 2+) FORMUL 9 SEP C3 H8 N O6 P FORMUL 11 HOH *302(H2 O) HELIX 1 1 LYS C 87 GLN C 91 5 5 SHEET 1 AA 5 THR A 113 GLN A 118 0 SHEET 2 AA 5 ALA A 94 ILE A 98 -1 O ALA A 94 N GLN A 118 SHEET 3 AA 5 VAL A 213 PRO A 221 -1 O PHE A 214 N ALA A 97 SHEET 4 AA 5 GLY A 135 SER A 145 -1 O TYR A 136 N ILE A 219 SHEET 5 AA 5 GLN A 177 LEU A 187 -1 O GLN A 177 N SER A 145 SHEET 1 AB 5 TYR A 122 GLN A 123 0 SHEET 2 AB 5 ARG A 128 VAL A 130 -1 O ARG A 128 N GLN A 123 SHEET 3 AB 5 GLN A 192 GLY A 202 -1 O VAL A 193 N PHE A 129 SHEET 4 AB 5 ILE A 149 SER A 157 -1 O CYS A 150 N ASP A 198 SHEET 5 AB 5 GLY A 166 ASP A 169 -1 O PHE A 167 N LEU A 151 SHEET 1 AC 5 TYR A 122 GLN A 123 0 SHEET 2 AC 5 ARG A 128 VAL A 130 -1 O ARG A 128 N GLN A 123 SHEET 3 AC 5 GLN A 192 GLY A 202 -1 O VAL A 193 N PHE A 129 SHEET 4 AC 5 ILE A 149 SER A 157 -1 O CYS A 150 N ASP A 198 SHEET 5 AC 5 GLN A 160 ARG A 162 -1 O GLN A 160 N SER A 157 SHEET 1 BA 5 HIS B 117 MET B 122 0 SHEET 2 BA 5 ALA B 96 THR B 100 -1 O ALA B 96 N MET B 122 SHEET 3 BA 5 ILE B 214 PRO B 222 -1 O PHE B 215 N ALA B 99 SHEET 4 BA 5 GLY B 139 SER B 149 -1 O LEU B 140 N LEU B 220 SHEET 5 BA 5 GLN B 179 LEU B 189 -1 O GLN B 179 N SER B 149 SHEET 1 BB 4 PHE B 133 THR B 134 0 SHEET 2 BB 4 ASN B 194 ASN B 203 -1 O VAL B 195 N PHE B 133 SHEET 3 BB 4 LEU B 153 GLY B 160 -1 O CYS B 154 N THR B 200 SHEET 4 BB 4 ALA B 164 ASP B 172 -1 O GLN B 165 N ARG B 159 SHEET 1 CA 5 ALA C 114 THR C 117 0 SHEET 2 CA 5 VAL C 93 THR C 97 -1 O THR C 95 N LEU C 116 SHEET 3 CA 5 VAL C 208 PRO C 216 -1 O PHE C 209 N VAL C 96 SHEET 4 CA 5 GLY C 136 HIS C 146 -1 O LEU C 137 N LEU C 214 SHEET 5 CA 5 GLN C 173 LEU C 183 -1 O GLN C 173 N HIS C 146 SHEET 1 CB 5 TYR C 123 ASP C 124 0 SHEET 2 CB 5 LYS C 129 THR C 131 -1 O LYS C 129 N ASP C 124 SHEET 3 CB 5 GLU C 188 TYR C 197 -1 O VAL C 189 N PHE C 130 SHEET 4 CB 5 LEU C 150 ARG C 156 -1 O CYS C 151 N ASN C 194 SHEET 5 CB 5 VAL C 159 GLY C 166 -1 O VAL C 159 N ARG C 156 SHEET 1 DA 5 THR D 113 GLN D 118 0 SHEET 2 DA 5 ALA D 94 ILE D 98 -1 O ALA D 94 N GLN D 118 SHEET 3 DA 5 VAL D 213 PRO D 221 -1 O PHE D 214 N ALA D 97 SHEET 4 DA 5 GLY D 135 SER D 145 -1 O TYR D 136 N ILE D 219 SHEET 5 DA 5 GLN D 177 LEU D 187 -1 O GLN D 177 N SER D 145 SHEET 1 DB 4 ARG D 128 VAL D 130 0 SHEET 2 DB 4 GLN D 192 GLY D 202 -1 O VAL D 193 N PHE D 129 SHEET 3 DB 4 ILE D 149 SER D 157 -1 O CYS D 150 N ASP D 198 SHEET 4 DB 4 GLY D 166 ASP D 169 -1 O PHE D 167 N LEU D 151 SHEET 1 DC 4 ARG D 128 VAL D 130 0 SHEET 2 DC 4 GLN D 192 GLY D 202 -1 O VAL D 193 N PHE D 129 SHEET 3 DC 4 ILE D 149 SER D 157 -1 O CYS D 150 N ASP D 198 SHEET 4 DC 4 GLN D 160 ARG D 162 -1 O GLN D 160 N SER D 157 SHEET 1 EA 5 HIS E 117 MET E 122 0 SHEET 2 EA 5 ALA E 96 THR E 100 -1 O ALA E 96 N MET E 122 SHEET 3 EA 5 ILE E 214 PRO E 222 -1 O PHE E 215 N ALA E 99 SHEET 4 EA 5 GLY E 139 SER E 149 -1 O LEU E 140 N LEU E 220 SHEET 5 EA 5 GLN E 179 LEU E 189 -1 O GLN E 179 N SER E 149 SHEET 1 EB 4 PHE E 133 THR E 134 0 SHEET 2 EB 4 ASN E 194 GLN E 198 -1 O VAL E 195 N PHE E 133 SHEET 3 EB 4 LEU E 153 GLY E 160 -1 O ASN E 156 N GLN E 198 SHEET 4 EB 4 GLN E 165 ASP E 172 -1 O GLN E 165 N ARG E 159 SHEET 1 FA 5 ALA F 114 THR F 117 0 SHEET 2 FA 5 VAL F 93 THR F 97 -1 O THR F 95 N LEU F 116 SHEET 3 FA 5 SER F 207 PRO F 216 -1 O PHE F 209 N VAL F 96 SHEET 4 FA 5 GLY F 136 HIS F 146 -1 O LEU F 137 N LEU F 214 SHEET 5 FA 5 GLN F 173 LEU F 183 -1 O GLN F 173 N HIS F 146 SHEET 1 FB 4 PHE F 130 THR F 131 0 SHEET 2 FB 4 GLU F 188 TYR F 197 -1 O VAL F 189 N PHE F 130 SHEET 3 FB 4 LEU F 150 ARG F 156 -1 O CYS F 151 N ASN F 194 SHEET 4 FB 4 VAL F 159 GLY F 166 -1 O VAL F 159 N ARG F 156 SSBOND 1 CYS A 150 CYS A 168 1555 1555 2.04 SSBOND 2 CYS B 154 CYS B 171 1555 1555 2.05 SSBOND 3 CYS C 151 CYS C 165 1555 1555 2.05 SSBOND 4 CYS D 150 CYS D 168 1555 1555 2.05 SSBOND 5 CYS E 154 CYS E 171 1555 1555 2.04 SSBOND 6 CYS F 151 CYS F 165 1555 1555 2.03 LINK OE1 GLN A 177 CA CA B1224 1555 1555 2.34 LINK OD2 ASP B 172 CA CA B1224 1555 1555 2.34 LINK O TYR B 173 CA CA B1224 1555 1555 2.33 LINK OE1 GLN B 179 CA CA B1224 1555 1555 2.25 LINK CA CA B1224 O HOH C2044 1555 1555 2.55 LINK OE1 GLN D 177 CA CA E1224 1555 1555 2.42 LINK OD2 ASP E 172 CA CA E1224 1555 1555 2.28 LINK O TYR E 173 CA CA E1224 1555 1555 2.61 LINK OE1 GLN E 179 CA CA E1224 1555 1555 2.34 LINK CA CA E1224 O HOH F2044 1555 1555 2.68 CRYST1 48.090 48.070 84.700 91.34 93.34 113.68 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020794 0.009119 0.001682 0.00000 SCALE2 0.000000 0.022716 0.001164 0.00000 SCALE3 0.000000 0.000000 0.011842 0.00000