HEADER LYASE 26-FEB-07 2JI7 TITLE X-RAY STRUCTURE OF OXALYL-COA DECARBOXYLASE WITH COVALENT REACTION TITLE 2 INTERMEDIATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXALYL-COA DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OXALYL-COENZYME A DECARBOXYLASE; COMPND 5 EC: 4.1.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OXALOBACTER FORMIGENES; SOURCE 3 ORGANISM_TAXID: 847; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET9A KEYWDS LYASE, FLAVOPROTEIN, DECARBOXYLASE, OXALATE DEGRADATION, INTERMEDIATE KEYWDS 2 COMPLEX, THIAMIN DIPHOSPHATE-DEPENDENT, THIAMINE PYROPHOSPHATE, NON- KEYWDS 3 OXIDATIVE DECARBOXYLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.L.BERTHOLD,C.G.TOYOTA,P.MOUSSATCHE,M.D.WOOD,F.LEEPER, AUTHOR 2 N.G.J.RICHARDS,Y.LINDQVIST REVDAT 5 13-DEC-23 2JI7 1 LINK REVDAT 4 13-JUL-11 2JI7 1 VERSN REVDAT 3 24-FEB-09 2JI7 1 VERSN REVDAT 2 14-AUG-07 2JI7 1 JRNL REVDAT 1 17-JUL-07 2JI7 0 JRNL AUTH C.L.BERTHOLD,C.G.TOYOTA,P.MOUSSATCHE,M.D.WOOD,F.LEEPER, JRNL AUTH 2 N.G.J.RICHARDS,Y.LINDQVIST JRNL TITL CRYSTALLOGRAPHIC SNAPSHOTS OF OXALYL-COA DECARBOXYLASE GIVE JRNL TITL 2 INSIGHTS INTO CATALYSIS BY NONOXIDATIVE THDP-DEPENDENT JRNL TITL 3 DECARBOXYLASES JRNL REF STRUCTURE V. 15 853 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17637344 JRNL DOI 10.1016/J.STR.2007.06.001 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 118269 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 5831 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8732 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 409 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8348 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 342 REMARK 3 SOLVENT ATOMS : 1185 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 18.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.17000 REMARK 3 B22 (A**2) : 1.17000 REMARK 3 B33 (A**2) : -1.76000 REMARK 3 B12 (A**2) : 0.59000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.325 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8949 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 6057 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12161 ; 1.425 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14718 ; 1.622 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1152 ; 5.641 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 341 ;36.749 ;24.839 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1494 ;12.422 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;16.262 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1355 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9796 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1614 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1888 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6475 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4381 ; 0.167 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4327 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 960 ; 0.118 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 84 ; 0.270 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 54 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5835 ; 0.804 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8972 ; 1.086 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3630 ; 1.222 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3171 ; 1.824 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 565 REMARK 3 ORIGIN FOR THE GROUP (A): 63.5119 -17.6365 -5.0880 REMARK 3 T TENSOR REMARK 3 T11: -0.1473 T22: -0.1340 REMARK 3 T33: -0.1366 T12: -0.0402 REMARK 3 T13: 0.0106 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.1231 L22: 0.5090 REMARK 3 L33: 0.8519 L12: -0.1380 REMARK 3 L13: -0.0472 L23: 0.0886 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: -0.0248 S13: -0.0249 REMARK 3 S21: 0.0711 S22: -0.0155 S23: -0.0062 REMARK 3 S31: 0.1217 S32: 0.0132 S33: 0.0091 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 565 REMARK 3 ORIGIN FOR THE GROUP (A): 56.0422 16.3163 -4.0054 REMARK 3 T TENSOR REMARK 3 T11: -0.1582 T22: -0.1131 REMARK 3 T33: -0.1357 T12: -0.0073 REMARK 3 T13: 0.0059 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 0.2232 L22: 0.6588 REMARK 3 L33: 0.7248 L12: -0.1437 REMARK 3 L13: 0.0203 L23: -0.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: -0.0378 S13: 0.0333 REMARK 3 S21: 0.0730 S22: -0.0206 S23: 0.0641 REMARK 3 S31: -0.0835 S32: -0.1250 S33: 0.0044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JI7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290031629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : THIN DIAMOND DOUBLE CRYSTALS REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 124184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 76.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2C31 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.64600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 101.29200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 101.29200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.64600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 29720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 79790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -172.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -50.64600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2184 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ASP A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 6 REMARK 465 GLY A 566 REMARK 465 LYS A 567 REMARK 465 LYS A 568 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 ASP B 5 REMARK 465 ASN B 6 REMARK 465 GLY B 566 REMARK 465 LYS B 567 REMARK 465 LYS B 568 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2147 O HOH B 2170 2.14 REMARK 500 O HOH B 2028 O HOH B 2072 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2245 O HOH A 2541 3654 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 81 -80.84 -0.59 REMARK 500 SER A 108 -149.07 -91.71 REMARK 500 THR A 265 43.13 -141.63 REMARK 500 ASN A 284 -158.34 -100.97 REMARK 500 ASN A 315 -55.02 -126.37 REMARK 500 ALA A 401 -85.72 -103.23 REMARK 500 ASP A 421 -169.24 -126.15 REMARK 500 TYR A 483 -53.99 76.85 REMARK 500 SER A 553 19.93 57.46 REMARK 500 ALA B 81 -83.63 2.54 REMARK 500 SER B 108 -153.67 -92.12 REMARK 500 MET B 123 142.78 -170.02 REMARK 500 ASN B 284 -159.08 -100.23 REMARK 500 ASN B 315 -53.29 -127.97 REMARK 500 ALA B 401 -85.19 -105.86 REMARK 500 ASP B 421 -168.67 -127.83 REMARK 500 TYR B 483 -56.52 73.66 REMARK 500 SER B 553 19.84 58.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2056 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A2063 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A2137 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B2034 DISTANCE = 7.98 ANGSTROMS REMARK 525 HOH B2258 DISTANCE = 5.83 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1567 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 452 OD1 REMARK 620 2 ASN A 479 OD1 89.9 REMARK 620 3 GLY A 481 O 93.3 91.6 REMARK 620 4 OXT A1566 O1A 81.7 168.4 96.8 REMARK 620 5 OXT A1566 O3B 161.4 105.9 95.9 81.2 REMARK 620 6 HOH A2479 O 84.4 86.5 177.1 84.8 86.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1567 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 452 OD1 REMARK 620 2 ASN B 479 OD1 88.0 REMARK 620 3 GLY B 481 O 92.6 92.5 REMARK 620 4 OXT B1566 O1A 80.7 166.7 95.0 REMARK 620 5 OXT B1566 O3B 161.2 109.1 94.2 81.3 REMARK 620 6 HOH B2483 O 80.7 88.2 173.3 83.1 91.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXT B1566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXT A1566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1567 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1567 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B1568 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A1568 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1569 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B1569 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P A1570 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P B1570 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P B1571 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P A1571 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P B1572 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P A1572 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2C31 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH THE REMARK 900 COFACTOR DERIVATIVE THIAMIN-2-THIAZOLONE DIPHOSPHATE AND ADENOSINE REMARK 900 DIPHOSPHATE REMARK 900 RELATED ID: 2JI6 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH 3-DEAZA- REMARK 900 THDP AND OXALYL -COA REMARK 900 RELATED ID: 2JI8 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH FORMYL- REMARK 900 COA REMARK 900 RELATED ID: 2JI9 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH 3-DEAZA- REMARK 900 THDP REMARK 900 RELATED ID: 2JIB RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH REMARK 900 COENZYME-A DBREF 2JI7 A 1 568 UNP P40149 OXC_OXAFO 1 568 DBREF 2JI7 B 1 568 UNP P40149 OXC_OXAFO 1 568 SEQRES 1 A 568 MET SER ASN ASP ASP ASN VAL GLU LEU THR ASP GLY PHE SEQRES 2 A 568 HIS VAL LEU ILE ASP ALA LEU LYS MET ASN ASP ILE ASP SEQRES 3 A 568 THR MET TYR GLY VAL VAL GLY ILE PRO ILE THR ASN LEU SEQRES 4 A 568 ALA ARG MET TRP GLN ASP ASP GLY GLN ARG PHE TYR SER SEQRES 5 A 568 PHE ARG HIS GLU GLN HIS ALA GLY TYR ALA ALA SER ILE SEQRES 6 A 568 ALA GLY TYR ILE GLU GLY LYS PRO GLY VAL CYS LEU THR SEQRES 7 A 568 VAL SER ALA PRO GLY PHE LEU ASN GLY VAL THR SER LEU SEQRES 8 A 568 ALA HIS ALA THR THR ASN CYS PHE PRO MET ILE LEU LEU SEQRES 9 A 568 SER GLY SER SER GLU ARG GLU ILE VAL ASP LEU GLN GLN SEQRES 10 A 568 GLY ASP TYR GLU GLU MET ASP GLN MET ASN VAL ALA ARG SEQRES 11 A 568 PRO HIS CYS LYS ALA SER PHE ARG ILE ASN SER ILE LYS SEQRES 12 A 568 ASP ILE PRO ILE GLY ILE ALA ARG ALA VAL ARG THR ALA SEQRES 13 A 568 VAL SER GLY ARG PRO GLY GLY VAL TYR VAL ASP LEU PRO SEQRES 14 A 568 ALA LYS LEU PHE GLY GLN THR ILE SER VAL GLU GLU ALA SEQRES 15 A 568 ASN LYS LEU LEU PHE LYS PRO ILE ASP PRO ALA PRO ALA SEQRES 16 A 568 GLN ILE PRO ALA GLU ASP ALA ILE ALA ARG ALA ALA ASP SEQRES 17 A 568 LEU ILE LYS ASN ALA LYS ARG PRO VAL ILE MET LEU GLY SEQRES 18 A 568 LYS GLY ALA ALA TYR ALA GLN CYS ASP ASP GLU ILE ARG SEQRES 19 A 568 ALA LEU VAL GLU GLU THR GLY ILE PRO PHE LEU PRO MET SEQRES 20 A 568 GLY MET ALA LYS GLY LEU LEU PRO ASP ASN HIS PRO GLN SEQRES 21 A 568 SER ALA ALA ALA THR ARG ALA PHE ALA LEU ALA GLN CYS SEQRES 22 A 568 ASP VAL CYS VAL LEU ILE GLY ALA ARG LEU ASN TRP LEU SEQRES 23 A 568 MET GLN HIS GLY LYS GLY LYS THR TRP GLY ASP GLU LEU SEQRES 24 A 568 LYS LYS TYR VAL GLN ILE ASP ILE GLN ALA ASN GLU MET SEQRES 25 A 568 ASP SER ASN GLN PRO ILE ALA ALA PRO VAL VAL GLY ASP SEQRES 26 A 568 ILE LYS SER ALA VAL SER LEU LEU ARG LYS ALA LEU LYS SEQRES 27 A 568 GLY ALA PRO LYS ALA ASP ALA GLU TRP THR GLY ALA LEU SEQRES 28 A 568 LYS ALA LYS VAL ASP GLY ASN LYS ALA LYS LEU ALA GLY SEQRES 29 A 568 LYS MET THR ALA GLU THR PRO SER GLY MET MET ASN TYR SEQRES 30 A 568 SER ASN SER LEU GLY VAL VAL ARG ASP PHE MET LEU ALA SEQRES 31 A 568 ASN PRO ASP ILE SER LEU VAL ASN GLU GLY ALA ASN ALA SEQRES 32 A 568 LEU ASP ASN THR ARG MET ILE VAL ASP MET LEU LYS PRO SEQRES 33 A 568 ARG LYS ARG LEU ASP SER GLY THR TRP GLY VAL MET GLY SEQRES 34 A 568 ILE GLY MET GLY TYR CYS VAL ALA ALA ALA ALA VAL THR SEQRES 35 A 568 GLY LYS PRO VAL ILE ALA VAL GLU GLY ASP SER ALA PHE SEQRES 36 A 568 GLY PHE SER GLY MET GLU LEU GLU THR ILE CYS ARG TYR SEQRES 37 A 568 ASN LEU PRO VAL THR VAL ILE ILE MET ASN ASN GLY GLY SEQRES 38 A 568 ILE TYR LYS GLY ASN GLU ALA ASP PRO GLN PRO GLY VAL SEQRES 39 A 568 ILE SER CYS THR ARG LEU THR ARG GLY ARG TYR ASP MET SEQRES 40 A 568 MET MET GLU ALA PHE GLY GLY LYS GLY TYR VAL ALA ASN SEQRES 41 A 568 THR PRO ALA GLU LEU LYS ALA ALA LEU GLU GLU ALA VAL SEQRES 42 A 568 ALA SER GLY LYS PRO CYS LEU ILE ASN ALA MET ILE ASP SEQRES 43 A 568 PRO ASP ALA GLY VAL GLU SER GLY ARG ILE LYS SER LEU SEQRES 44 A 568 ASN VAL VAL SER LYS VAL GLY LYS LYS SEQRES 1 B 568 MET SER ASN ASP ASP ASN VAL GLU LEU THR ASP GLY PHE SEQRES 2 B 568 HIS VAL LEU ILE ASP ALA LEU LYS MET ASN ASP ILE ASP SEQRES 3 B 568 THR MET TYR GLY VAL VAL GLY ILE PRO ILE THR ASN LEU SEQRES 4 B 568 ALA ARG MET TRP GLN ASP ASP GLY GLN ARG PHE TYR SER SEQRES 5 B 568 PHE ARG HIS GLU GLN HIS ALA GLY TYR ALA ALA SER ILE SEQRES 6 B 568 ALA GLY TYR ILE GLU GLY LYS PRO GLY VAL CYS LEU THR SEQRES 7 B 568 VAL SER ALA PRO GLY PHE LEU ASN GLY VAL THR SER LEU SEQRES 8 B 568 ALA HIS ALA THR THR ASN CYS PHE PRO MET ILE LEU LEU SEQRES 9 B 568 SER GLY SER SER GLU ARG GLU ILE VAL ASP LEU GLN GLN SEQRES 10 B 568 GLY ASP TYR GLU GLU MET ASP GLN MET ASN VAL ALA ARG SEQRES 11 B 568 PRO HIS CYS LYS ALA SER PHE ARG ILE ASN SER ILE LYS SEQRES 12 B 568 ASP ILE PRO ILE GLY ILE ALA ARG ALA VAL ARG THR ALA SEQRES 13 B 568 VAL SER GLY ARG PRO GLY GLY VAL TYR VAL ASP LEU PRO SEQRES 14 B 568 ALA LYS LEU PHE GLY GLN THR ILE SER VAL GLU GLU ALA SEQRES 15 B 568 ASN LYS LEU LEU PHE LYS PRO ILE ASP PRO ALA PRO ALA SEQRES 16 B 568 GLN ILE PRO ALA GLU ASP ALA ILE ALA ARG ALA ALA ASP SEQRES 17 B 568 LEU ILE LYS ASN ALA LYS ARG PRO VAL ILE MET LEU GLY SEQRES 18 B 568 LYS GLY ALA ALA TYR ALA GLN CYS ASP ASP GLU ILE ARG SEQRES 19 B 568 ALA LEU VAL GLU GLU THR GLY ILE PRO PHE LEU PRO MET SEQRES 20 B 568 GLY MET ALA LYS GLY LEU LEU PRO ASP ASN HIS PRO GLN SEQRES 21 B 568 SER ALA ALA ALA THR ARG ALA PHE ALA LEU ALA GLN CYS SEQRES 22 B 568 ASP VAL CYS VAL LEU ILE GLY ALA ARG LEU ASN TRP LEU SEQRES 23 B 568 MET GLN HIS GLY LYS GLY LYS THR TRP GLY ASP GLU LEU SEQRES 24 B 568 LYS LYS TYR VAL GLN ILE ASP ILE GLN ALA ASN GLU MET SEQRES 25 B 568 ASP SER ASN GLN PRO ILE ALA ALA PRO VAL VAL GLY ASP SEQRES 26 B 568 ILE LYS SER ALA VAL SER LEU LEU ARG LYS ALA LEU LYS SEQRES 27 B 568 GLY ALA PRO LYS ALA ASP ALA GLU TRP THR GLY ALA LEU SEQRES 28 B 568 LYS ALA LYS VAL ASP GLY ASN LYS ALA LYS LEU ALA GLY SEQRES 29 B 568 LYS MET THR ALA GLU THR PRO SER GLY MET MET ASN TYR SEQRES 30 B 568 SER ASN SER LEU GLY VAL VAL ARG ASP PHE MET LEU ALA SEQRES 31 B 568 ASN PRO ASP ILE SER LEU VAL ASN GLU GLY ALA ASN ALA SEQRES 32 B 568 LEU ASP ASN THR ARG MET ILE VAL ASP MET LEU LYS PRO SEQRES 33 B 568 ARG LYS ARG LEU ASP SER GLY THR TRP GLY VAL MET GLY SEQRES 34 B 568 ILE GLY MET GLY TYR CYS VAL ALA ALA ALA ALA VAL THR SEQRES 35 B 568 GLY LYS PRO VAL ILE ALA VAL GLU GLY ASP SER ALA PHE SEQRES 36 B 568 GLY PHE SER GLY MET GLU LEU GLU THR ILE CYS ARG TYR SEQRES 37 B 568 ASN LEU PRO VAL THR VAL ILE ILE MET ASN ASN GLY GLY SEQRES 38 B 568 ILE TYR LYS GLY ASN GLU ALA ASP PRO GLN PRO GLY VAL SEQRES 39 B 568 ILE SER CYS THR ARG LEU THR ARG GLY ARG TYR ASP MET SEQRES 40 B 568 MET MET GLU ALA PHE GLY GLY LYS GLY TYR VAL ALA ASN SEQRES 41 B 568 THR PRO ALA GLU LEU LYS ALA ALA LEU GLU GLU ALA VAL SEQRES 42 B 568 ALA SER GLY LYS PRO CYS LEU ILE ASN ALA MET ILE ASP SEQRES 43 B 568 PRO ASP ALA GLY VAL GLU SER GLY ARG ILE LYS SER LEU SEQRES 44 B 568 ASN VAL VAL SER LYS VAL GLY LYS LYS HET OXT A1566 76 HET MG A1567 1 HET ADP A1568 27 HET PGE A1569 10 HET B3P A1570 19 HET B3P A1571 19 HET B3P A1572 19 HET OXT B1566 76 HET MG B1567 1 HET ADP B1568 27 HET PGE B1569 10 HET B3P B1570 19 HET B3P B1571 19 HET B3P B1572 19 HETNAM OXT 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1R,11R, HETNAM 2 OXT 15S,17R)-19-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)- HETNAM 3 OXT 4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-1,11, HETNAM 4 OXT 15,17-TETRAHYDROXY-12,12-DIMETHYL-15,17-DIOXIDO-6,10- HETNAM 5 OXT DIOXO-14,16,18-TRIOXA-2-THIA-5,9-DIAZA-15,17- HETNAM 6 OXT DIPHOSPHANONADEC-1-YL}-5-(2-{[(R)- HETNAM 7 OXT HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1, HETNAM 8 OXT 3-THIAZOL-3-IUM HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PGE TRIETHYLENE GLYCOL HETNAM B3P 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- HETNAM 2 B3P PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL FORMUL 3 OXT 2(C34 H55 N11 O24 P5 S2 1+) FORMUL 4 MG 2(MG 2+) FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 6 PGE 2(C6 H14 O4) FORMUL 7 B3P 6(C11 H26 N2 O6) FORMUL 17 HOH *1185(H2 O) HELIX 1 1 GLY A 12 ASN A 23 1 12 HELIX 2 2 ILE A 36 ASP A 46 1 11 HELIX 3 3 HIS A 55 GLY A 71 1 17 HELIX 4 4 SER A 80 CYS A 98 1 19 HELIX 5 5 GLU A 109 LEU A 115 1 7 HELIX 6 6 ASP A 124 ALA A 129 1 6 HELIX 7 7 ARG A 130 CYS A 133 5 4 HELIX 8 8 SER A 141 LYS A 143 5 3 HELIX 9 9 ASP A 144 SER A 158 1 15 HELIX 10 10 ALA A 170 GLY A 174 1 5 HELIX 11 11 VAL A 179 LEU A 186 1 8 HELIX 12 12 ALA A 199 ASN A 212 1 14 HELIX 13 13 GLY A 221 ALA A 227 1 7 HELIX 14 14 CYS A 229 GLY A 241 1 13 HELIX 15 15 ALA A 262 ALA A 264 5 3 HELIX 16 16 THR A 265 CYS A 273 1 9 HELIX 17 17 ASN A 284 LYS A 291 5 8 HELIX 18 18 GLY A 292 GLY A 296 5 5 HELIX 19 19 GLN A 308 MET A 312 5 5 HELIX 20 20 ASP A 325 LEU A 337 1 13 HELIX 21 21 ASP A 344 THR A 367 1 24 HELIX 22 22 ASN A 376 ASN A 391 1 16 HELIX 23 23 ALA A 401 VAL A 411 1 11 HELIX 24 24 ILE A 430 GLY A 443 1 14 HELIX 25 25 ASP A 452 PHE A 457 1 6 HELIX 26 26 SER A 458 MET A 460 5 3 HELIX 27 27 GLU A 461 TYR A 468 1 8 HELIX 28 28 ARG A 504 PHE A 512 1 9 HELIX 29 29 THR A 521 GLY A 536 1 16 HELIX 30 30 SER A 553 ASN A 560 5 8 HELIX 31 31 GLY B 12 ASN B 23 1 12 HELIX 32 32 ILE B 36 ASP B 46 1 11 HELIX 33 33 HIS B 55 GLY B 71 1 17 HELIX 34 34 SER B 80 CYS B 98 1 19 HELIX 35 35 GLU B 109 LEU B 115 1 7 HELIX 36 36 ASP B 124 ARG B 130 1 7 HELIX 37 37 PRO B 131 CYS B 133 5 3 HELIX 38 38 SER B 141 LYS B 143 5 3 HELIX 39 39 ASP B 144 SER B 158 1 15 HELIX 40 40 ALA B 170 GLY B 174 1 5 HELIX 41 41 VAL B 179 LEU B 186 1 8 HELIX 42 42 ALA B 199 ASN B 212 1 14 HELIX 43 43 GLY B 221 ALA B 227 1 7 HELIX 44 44 CYS B 229 GLY B 241 1 13 HELIX 45 45 ALA B 262 ALA B 264 5 3 HELIX 46 46 THR B 265 CYS B 273 1 9 HELIX 47 47 ASN B 284 LYS B 291 5 8 HELIX 48 48 GLY B 292 GLY B 296 5 5 HELIX 49 49 GLN B 308 MET B 312 5 5 HELIX 50 50 ASP B 325 LEU B 337 1 13 HELIX 51 51 ASP B 344 THR B 367 1 24 HELIX 52 52 ASN B 376 ASN B 391 1 16 HELIX 53 53 ALA B 401 VAL B 411 1 11 HELIX 54 54 ILE B 430 GLY B 443 1 14 HELIX 55 55 ASP B 452 PHE B 457 1 6 HELIX 56 56 SER B 458 MET B 460 5 3 HELIX 57 57 GLU B 461 TYR B 468 1 8 HELIX 58 58 ARG B 504 PHE B 512 1 9 HELIX 59 59 THR B 521 GLY B 536 1 16 HELIX 60 60 SER B 553 ASN B 560 5 8 SHEET 1 AA 2 LEU A 9 ASP A 11 0 SHEET 2 AA 2 THR A 176 SER A 178 -1 O ILE A 177 N THR A 10 SHEET 1 AB 6 ARG A 49 SER A 52 0 SHEET 2 AB 6 THR A 27 GLY A 30 1 O MET A 28 N TYR A 51 SHEET 3 AB 6 GLY A 74 THR A 78 1 O VAL A 75 N TYR A 29 SHEET 4 AB 6 MET A 101 SER A 107 1 O ILE A 102 N CYS A 76 SHEET 5 AB 6 GLY A 163 PRO A 169 1 O VAL A 164 N LEU A 103 SHEET 6 AB 6 ALA A 135 ARG A 138 1 O ALA A 135 N TYR A 165 SHEET 1 AC 5 PHE A 244 PRO A 246 0 SHEET 2 AC 5 VAL A 217 LEU A 220 1 O ILE A 218 N LEU A 245 SHEET 3 AC 5 VAL A 275 ILE A 279 1 O VAL A 275 N VAL A 217 SHEET 4 AC 5 LYS A 301 ASP A 306 1 O LYS A 301 N CYS A 276 SHEET 5 AC 5 ALA A 320 VAL A 323 1 O ALA A 320 N GLN A 304 SHEET 1 AD 6 ARG A 419 ASP A 421 0 SHEET 2 AD 6 SER A 395 GLU A 399 1 O LEU A 396 N LEU A 420 SHEET 3 AD 6 VAL A 446 GLY A 451 1 O ILE A 447 N VAL A 397 SHEET 4 AD 6 VAL A 472 ASN A 478 1 O THR A 473 N ALA A 448 SHEET 5 AD 6 CYS A 539 MET A 544 1 O CYS A 539 N VAL A 474 SHEET 6 AD 6 LYS A 515 ALA A 519 1 O LYS A 515 N LEU A 540 SHEET 1 BA 2 LEU B 9 ASP B 11 0 SHEET 2 BA 2 THR B 176 SER B 178 -1 O ILE B 177 N THR B 10 SHEET 1 BB 6 ARG B 49 SER B 52 0 SHEET 2 BB 6 THR B 27 GLY B 30 1 O MET B 28 N TYR B 51 SHEET 3 BB 6 GLY B 74 THR B 78 1 O VAL B 75 N TYR B 29 SHEET 4 BB 6 MET B 101 SER B 107 1 O ILE B 102 N CYS B 76 SHEET 5 BB 6 GLY B 163 PRO B 169 1 O VAL B 164 N LEU B 103 SHEET 6 BB 6 ALA B 135 ARG B 138 1 O ALA B 135 N TYR B 165 SHEET 1 BC 5 PHE B 244 PRO B 246 0 SHEET 2 BC 5 VAL B 217 LEU B 220 1 O ILE B 218 N LEU B 245 SHEET 3 BC 5 VAL B 275 ILE B 279 1 O VAL B 275 N VAL B 217 SHEET 4 BC 5 LYS B 301 ASP B 306 1 O LYS B 301 N CYS B 276 SHEET 5 BC 5 ALA B 320 VAL B 323 1 O ALA B 320 N GLN B 304 SHEET 1 BD 6 ARG B 419 ASP B 421 0 SHEET 2 BD 6 SER B 395 GLU B 399 1 O LEU B 396 N LEU B 420 SHEET 3 BD 6 VAL B 446 GLY B 451 1 O ILE B 447 N VAL B 397 SHEET 4 BD 6 VAL B 472 ASN B 478 1 O THR B 473 N ALA B 448 SHEET 5 BD 6 CYS B 539 MET B 544 1 O CYS B 539 N VAL B 474 SHEET 6 BD 6 LYS B 515 ALA B 519 1 O LYS B 515 N LEU B 540 LINK OD1 ASP A 452 MG MG A1567 1555 1555 2.10 LINK OD1 ASN A 479 MG MG A1567 1555 1555 2.13 LINK O GLY A 481 MG MG A1567 1555 1555 2.13 LINK O1A OXT A1566 MG MG A1567 1555 1555 2.15 LINK O3B OXT A1566 MG MG A1567 1555 1555 2.02 LINK MG MG A1567 O HOH A2479 1555 1555 2.32 LINK OD1 ASP B 452 MG MG B1567 1555 1555 2.16 LINK OD1 ASN B 479 MG MG B1567 1555 1555 2.09 LINK O GLY B 481 MG MG B1567 1555 1555 2.17 LINK O1A OXT B1566 MG MG B1567 1555 1555 2.14 LINK O3B OXT B1566 MG MG B1567 1555 1555 1.99 LINK MG MG B1567 O HOH B2483 1555 1555 2.18 CISPEP 1 ILE A 34 PRO A 35 0 -0.33 CISPEP 2 ILE B 34 PRO B 35 0 1.20 SITE 1 AC1 51 VAL A 32 GLU A 56 VAL A 79 ASN A 86 SITE 2 AC1 51 TYR A 120 GLU A 121 HOH A2032 ALA B 263 SITE 3 AC1 51 ALA B 264 THR B 265 ARG B 266 ALA B 267 SITE 4 AC1 51 TRP B 285 LEU B 286 ASN B 358 LYS B 359 SITE 5 AC1 51 LEU B 362 TYR B 377 GLY B 400 ALA B 401 SITE 6 AC1 51 ASN B 402 ALA B 403 LEU B 404 ASP B 405 SITE 7 AC1 51 ARG B 408 MET B 409 GLY B 426 MET B 428 SITE 8 AC1 51 GLY B 451 ASP B 452 SER B 453 ALA B 454 SITE 9 AC1 51 PHE B 457 ASN B 479 GLY B 481 ILE B 482 SITE 10 AC1 51 TYR B 483 ARG B 555 MG B1567 HOH B2437 SITE 11 AC1 51 HOH B2457 HOH B2483 HOH B2559 HOH B2571 SITE 12 AC1 51 HOH B2572 HOH B2573 HOH B2574 HOH B2575 SITE 13 AC1 51 HOH B2576 HOH B2577 HOH B2578 SITE 1 AC2 53 ALA A 263 ALA A 264 THR A 265 ARG A 266 SITE 2 AC2 53 ALA A 267 TRP A 285 LEU A 286 ASN A 358 SITE 3 AC2 53 LYS A 359 LEU A 362 TYR A 377 GLY A 400 SITE 4 AC2 53 ALA A 401 ASN A 402 ALA A 403 LEU A 404 SITE 5 AC2 53 ASP A 405 ARG A 408 MET A 409 GLY A 426 SITE 6 AC2 53 MET A 428 GLY A 451 ASP A 452 SER A 453 SITE 7 AC2 53 ALA A 454 PHE A 457 ASN A 479 GLY A 481 SITE 8 AC2 53 ILE A 482 TYR A 483 ARG A 555 MG A1567 SITE 9 AC2 53 HOH A2435 HOH A2436 HOH A2457 HOH A2479 SITE 10 AC2 53 HOH A2556 HOH A2570 HOH A2571 HOH A2572 SITE 11 AC2 53 HOH A2573 HOH A2574 HOH A2575 HOH A2576 SITE 12 AC2 53 HOH A2577 HOH A2578 VAL B 32 GLU B 56 SITE 13 AC2 53 VAL B 79 ASN B 86 TYR B 120 GLU B 121 SITE 14 AC2 53 HOH B2039 SITE 1 AC3 5 ASP B 452 ASN B 479 GLY B 481 OXT B1566 SITE 2 AC3 5 HOH B2483 SITE 1 AC4 5 ASP A 452 ASN A 479 GLY A 481 OXT A1566 SITE 2 AC4 5 HOH A2479 SITE 1 AC5 19 ARG B 160 GLY B 221 LYS B 222 GLY B 223 SITE 2 AC5 19 TYR B 226 MET B 247 GLY B 280 ARG B 282 SITE 3 AC5 19 LEU B 286 ASP B 306 ILE B 307 GLY B 324 SITE 4 AC5 19 ASP B 325 ILE B 326 HOH B2308 HOH B2579 SITE 5 AC5 19 HOH B2580 HOH B2581 HOH B2583 SITE 1 AC6 19 ARG A 160 GLY A 221 LYS A 222 GLY A 223 SITE 2 AC6 19 TYR A 226 MET A 247 GLY A 280 ALA A 281 SITE 3 AC6 19 ARG A 282 LEU A 286 ASP A 306 ILE A 307 SITE 4 AC6 19 GLY A 324 ASP A 325 ILE A 326 HOH A2266 SITE 5 AC6 19 HOH A2458 HOH A2580 HOH A2581 SITE 1 AC7 5 GLU A 70 ALA A 193 TYR A 226 HOH A2270 SITE 2 AC7 5 HOH A2583 SITE 1 AC8 6 ALA B 193 ALA B 227 GLN B 228 HOH B2284 SITE 2 AC8 6 HOH B2582 HOH B2583 SITE 1 AC9 7 ASP A 489 GLY A 493 VAL A 494 ARG A 499 SITE 2 AC9 7 HOH A2584 ASN B 469 LYS B 537 SITE 1 BC1 7 GLU A 369 MET B 366 THR B 367 GLY B 382 SITE 2 BC1 7 ARG B 385 ASP B 386 HOH B2585 SITE 1 BC2 6 ASN A 469 HOH A2474 ASP B 489 GLY B 493 SITE 2 BC2 6 VAL B 494 ARG B 499 SITE 1 BC3 9 MET A 366 THR A 367 GLY A 382 VAL A 383 SITE 2 BC3 9 ARG A 385 ASP A 386 HOH A2398 HOH A2417 SITE 3 BC3 9 HOH A2420 SITE 1 BC4 9 LYS A 291 GLU B 109 GLU B 111 SER B 141 SITE 2 BC4 9 LYS B 143 ASP B 144 HOH B2587 HOH B2589 SITE 3 BC4 9 HOH B2592 SITE 1 BC5 8 GLU A 109 GLU A 111 LYS A 143 ASP A 144 SITE 2 BC5 8 HOH A2588 HOH A2591 HOH A2593 LYS B 291 CRYST1 126.181 126.181 151.938 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007925 0.004576 0.000000 0.00000 SCALE2 0.000000 0.009151 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006582 0.00000 MTRIX1 1 -1.000000 0.002592 0.000765 119.50000 1 MTRIX2 1 -0.002636 -0.998000 -0.063830 -1.45800 1 MTRIX3 1 0.000598 -0.063830 0.998000 -0.07888 1