HEADER HORMONE/GROWTH FACTOR 18-SEP-06 2JM2 TITLE STRUCTURE OF THE N-TERMINAL SUBDOMAIN OF INSULIN-LIKE GROWTH FACTOR TITLE 2 (IGF) BINDING PROTEIN-6 AND ITS INTERACTIONS WITH IGFS COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN 6; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL SUBDOMAIN OF IGFBP-6, RESIDUES 25-69; COMPND 5 SYNONYM: IBP-6,IGF-BINDING PROTEIN 6,IGFBP-6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS INSULIN LIKE GROWTH FACTOR BINDING PROTEIN, GROWTH FACTOR, HORMONE- KEYWDS 2 GROWTH FACTOR COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.R.CHANDRASHEKARAN,S.YAO,C.C.WANG,P.S.BANSAL,P.F.ALEWOOD,B.E.FORBES, AUTHOR 2 J.C.WALLACE,L.A.BACH,R.S.NORTON REVDAT 6 20-DEC-23 2JM2 1 REMARK REVDAT 5 14-JUN-23 2JM2 1 REMARK REVDAT 4 05-OCT-22 2JM2 1 COMPND SOURCE REMARK DBREF REVDAT 3 05-FEB-20 2JM2 1 SOURCE REMARK REVDAT 2 24-FEB-09 2JM2 1 VERSN REVDAT 1 27-MAR-07 2JM2 0 JRNL AUTH I.R.CHANDRASHEKARAN,S.YAO,C.C.WANG,P.S.BANSAL,P.F.ALEWOOD, JRNL AUTH 2 B.E.FORBES,J.C.WALLACE,L.A.BACH,R.S.NORTON JRNL TITL THE N-TERMINAL SUBDOMAIN OF INSULIN-LIKE GROWTH FACTOR (IGF) JRNL TITL 2 BINDING PROTEIN 6. STRUCTURE AND INTERACTION WITH IGFS JRNL REF BIOCHEMISTRY V. 46 3065 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17305365 JRNL DOI 10.1021/BI0619876 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : CD SCHWIETERS, JJ KUSZEWSKI, N TJANDRA AND GM REMARK 3 CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 446 RESTRAINTS, 428 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 18 REMARK 3 DIHEDRAL ANGLE RESTRAINTS REMARK 4 REMARK 4 2JM2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000100002. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 4.3 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.1 MM IGFBP-6, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; 2D DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 3 50.71 -93.42 REMARK 500 1 GLN A 10 -75.47 -164.39 REMARK 500 1 ALA A 14 52.23 -141.26 REMARK 500 1 CYS A 20 33.06 -92.11 REMARK 500 1 GLU A 22 49.17 -88.88 REMARK 500 1 GLU A 23 -168.03 58.65 REMARK 500 1 ASP A 25 -61.44 -144.34 REMARK 500 1 CYS A 33 79.28 -113.77 REMARK 500 1 CYS A 39 50.34 -161.06 REMARK 500 1 ARG A 41 -154.48 48.04 REMARK 500 2 PRO A 6 -86.18 -72.82 REMARK 500 2 ALA A 14 -60.62 -104.68 REMARK 500 2 CYS A 39 26.87 -144.23 REMARK 500 2 ARG A 41 118.43 -173.34 REMARK 500 2 ARG A 42 -42.30 -136.01 REMARK 500 3 LEU A 2 93.27 60.61 REMARK 500 3 ARG A 4 -56.63 -161.12 REMARK 500 3 GLN A 10 41.37 -80.62 REMARK 500 3 GLU A 23 55.22 -94.49 REMARK 500 3 GLU A 24 68.36 39.09 REMARK 500 3 ALA A 34 46.48 -152.24 REMARK 500 3 GLU A 35 -157.44 -128.73 REMARK 500 3 CYS A 39 115.04 -160.81 REMARK 500 3 ARG A 41 92.70 -172.24 REMARK 500 3 ARG A 42 -50.88 -174.44 REMARK 500 3 GLU A 43 -163.80 57.08 REMARK 500 4 GLN A 10 -63.40 -178.56 REMARK 500 4 VAL A 12 -47.24 -146.37 REMARK 500 4 GLN A 13 -55.07 -175.04 REMARK 500 4 SER A 28 77.30 -113.83 REMARK 500 4 CYS A 33 64.69 -160.67 REMARK 500 4 CYS A 39 -47.76 -160.04 REMARK 500 4 LEU A 40 -124.59 54.94 REMARK 500 4 ARG A 42 41.18 -160.14 REMARK 500 4 GLU A 43 79.25 49.76 REMARK 500 5 ARG A 4 -157.43 -83.75 REMARK 500 5 CYS A 8 -159.84 -92.04 REMARK 500 5 GLN A 10 85.72 -169.58 REMARK 500 5 VAL A 12 52.57 -146.26 REMARK 500 5 VAL A 21 43.63 -92.89 REMARK 500 5 GLU A 23 110.87 -162.29 REMARK 500 5 SER A 28 -65.51 -160.75 REMARK 500 5 ALA A 34 34.06 -141.50 REMARK 500 5 GLU A 35 -168.70 -111.15 REMARK 500 5 CYS A 39 -47.14 -144.81 REMARK 500 5 GLU A 43 -175.81 63.69 REMARK 500 6 LEU A 2 -170.72 59.57 REMARK 500 6 ALA A 3 -84.67 -152.15 REMARK 500 6 GLU A 31 -75.58 -159.84 REMARK 500 6 ALA A 34 49.24 -147.86 REMARK 500 REMARK 500 THIS ENTRY HAS 174 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7262 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFT ASSIGNMENTS DBREF 2JM2 A 1 45 UNP P24592 IBP6_HUMAN 25 69 SEQRES 1 A 45 ALA LEU ALA ARG CYS PRO GLY CYS GLY GLN GLY VAL GLN SEQRES 2 A 45 ALA GLY CYS PRO GLY GLY CYS VAL GLU GLU GLU ASP GLY SEQRES 3 A 45 GLY SER PRO ALA GLU GLY CYS ALA GLU ALA GLU GLY CYS SEQRES 4 A 45 LEU ARG ARG GLU GLY GLN HELIX 1 1 GLU A 35 LEU A 40 1 6 SSBOND 1 CYS A 5 CYS A 8 1555 1555 2.02 SSBOND 2 CYS A 16 CYS A 20 1555 1555 2.02 SSBOND 3 CYS A 33 CYS A 39 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1