HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-APR-07 2JOV TITLE NMR STRUCTURE OF CLOSTRIDIUM PERFRINGENS PROTEIN CPE0013. NORTHEAST TITLE 2 STRUCTURAL GENOMICS TARGET CPR31. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN CPE0013; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET21 KEYWDS ALPHA + BETA SANDWICH, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.DING,T.A.RAMELOT,C.G.ANKLIN,H.WANG,C.NWOSU,K.CUNNINGHAM,L.MA, AUTHOR 2 R.XIAO,J.LIU,M.C.BARAN,G.V.T.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE, AUTHOR 3 M.A.KENNEDY,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 08-MAY-24 2JOV 1 REMARK REVDAT 5 20-DEC-23 2JOV 1 REMARK REVDAT 4 14-JUN-23 2JOV 1 REMARK REVDAT 3 05-FEB-20 2JOV 1 REMARK SEQADV REVDAT 2 24-FEB-09 2JOV 1 VERSN REVDAT 1 08-MAY-07 2JOV 0 JRNL AUTH K.DING,T.A.RAMELOT,H.WANG,C.NWOSU,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL NMR STRUCTURE OF CLOSTRIDIUM PERFRINGENS PROTEIN CPE0013. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DGSA CALCULATION USING XPLOR NIH AND REMARK 3 THEN FOLLOWED BY CNS WATER REFINEMENT. REMARK 4 REMARK 4 2JOV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000100103. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 20 MM MES, 100 MM NACL, REMARK 210 10 MM DTT, 5 MM CACL2, 0.02 % REMARK 210 NAN3, 5 % D2O, 95% H2O/5% D2O; 1 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 20 MM MES, 100 MM NACL, REMARK 210 10 MM DTT, 5 MM CACL2, 0.02 % REMARK 210 NAN3, 100% D2O; 1 MM [U-5% 13C; REMARK 210 U-100% 15N] PROTEIN, 20 MM MES, REMARK 210 100 MM NACL, 10 MM DTT, 5 MM REMARK 210 CACL2, 0.02 % NAN3, 5 % D2O, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 2D 1H-13C HSQC; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH 2.15.0, REMARK 210 AUTOSTRUCTURE, SPARKY, NMRPIPE REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 33 OD2 ASP A 36 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 -71.48 -122.03 REMARK 500 1 LYS A 16 39.77 -149.58 REMARK 500 1 LYS A 17 -66.07 70.74 REMARK 500 1 HIS A 83 -91.73 -79.04 REMARK 500 1 HIS A 84 142.37 176.30 REMARK 500 2 SER A 15 45.37 -81.55 REMARK 500 2 LYS A 16 33.58 -99.00 REMARK 500 2 LYS A 17 -59.27 69.74 REMARK 500 2 ASN A 19 11.40 -143.50 REMARK 500 2 LEU A 44 42.14 -109.05 REMARK 500 2 SER A 77 48.80 -99.31 REMARK 500 2 HIS A 81 -75.86 67.45 REMARK 500 2 HIS A 84 -77.36 -143.03 REMARK 500 3 PHE A 6 107.39 -59.56 REMARK 500 3 LYS A 17 37.70 -83.74 REMARK 500 3 ILE A 31 22.54 -77.05 REMARK 500 3 VAL A 48 140.01 70.41 REMARK 500 4 VAL A 46 -157.33 -141.75 REMARK 500 4 VAL A 48 117.86 68.28 REMARK 500 4 PRO A 49 105.01 -43.29 REMARK 500 4 SER A 77 52.28 -146.80 REMARK 500 4 HIS A 82 95.35 65.86 REMARK 500 5 ASN A 59 77.68 55.04 REMARK 500 5 MET A 61 54.59 -141.99 REMARK 500 6 VAL A 48 79.95 60.08 REMARK 500 6 LYS A 75 -73.90 -61.45 REMARK 500 6 SER A 77 32.17 -85.40 REMARK 500 6 HIS A 80 32.34 -89.08 REMARK 500 6 HIS A 82 -66.14 -157.12 REMARK 500 6 HIS A 83 179.79 158.78 REMARK 500 7 HIS A 2 88.62 -171.80 REMARK 500 7 VAL A 48 128.27 75.82 REMARK 500 7 LYS A 51 -152.88 -127.16 REMARK 500 8 SER A 32 -25.48 70.98 REMARK 500 8 ASN A 62 79.40 57.80 REMARK 500 8 THR A 63 -55.72 -138.65 REMARK 500 8 LYS A 75 -75.39 -71.99 REMARK 500 8 SER A 77 -85.59 56.54 REMARK 500 8 HIS A 80 -72.50 -56.66 REMARK 500 8 HIS A 81 -74.85 63.46 REMARK 500 8 HIS A 82 -72.91 -166.93 REMARK 500 8 HIS A 83 142.70 -170.74 REMARK 500 9 VAL A 48 141.25 177.23 REMARK 500 9 PRO A 49 105.88 -42.06 REMARK 500 9 SER A 52 150.80 69.20 REMARK 500 9 ASN A 62 -2.87 70.67 REMARK 500 9 ASP A 76 -157.83 -108.37 REMARK 500 9 GLU A 79 40.49 -81.89 REMARK 500 9 HIS A 83 -67.48 -96.24 REMARK 500 10 HIS A 2 94.54 61.17 REMARK 500 REMARK 500 THIS ENTRY HAS 130 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15203 RELATED DB: BMRB REMARK 900 RELATED ID: CPR31 RELATED DB: TARGETDB DBREF 2JOV A 1 77 UNP Q8XPF0 Q8XPF0_CLOPE 1 77 SEQADV 2JOV LEU A 78 UNP Q8XPF0 CLONING ARTIFACT SEQADV 2JOV GLU A 79 UNP Q8XPF0 CLONING ARTIFACT SEQADV 2JOV HIS A 80 UNP Q8XPF0 EXPRESSION TAG SEQADV 2JOV HIS A 81 UNP Q8XPF0 EXPRESSION TAG SEQADV 2JOV HIS A 82 UNP Q8XPF0 EXPRESSION TAG SEQADV 2JOV HIS A 83 UNP Q8XPF0 EXPRESSION TAG SEQADV 2JOV HIS A 84 UNP Q8XPF0 EXPRESSION TAG SEQADV 2JOV HIS A 85 UNP Q8XPF0 EXPRESSION TAG SEQRES 1 A 85 MET HIS LYS ASP ILE PHE THR SER VAL VAL ARG VAL ARG SEQRES 2 A 85 GLY SER LYS LYS TYR ASN VAL VAL PRO VAL LYS SER ASN SEQRES 3 A 85 LYS PRO VAL GLU ILE SER LYS TRP ILE ASP PHE SER ASN SEQRES 4 A 85 VAL LEU SER ARG LEU TYR VAL GLY VAL PRO THR LYS SER SEQRES 5 A 85 GLY ASN VAL VAL CYS LYS ASN ILE MET ASN THR GLY VAL SEQRES 6 A 85 ASP ILE ILE CYS THR LYS ASN LEU PRO LYS ASP SER LEU SEQRES 7 A 85 GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 GLU A 30 SER A 42 1 13 SHEET 1 A 5 TYR A 45 VAL A 46 0 SHEET 2 A 5 ASP A 4 VAL A 12 1 N ARG A 11 O VAL A 46 SHEET 3 A 5 VAL A 20 VAL A 29 -1 O VAL A 23 N SER A 8 SHEET 4 A 5 ASP A 66 CYS A 69 -1 O ILE A 68 N LYS A 24 SHEET 5 A 5 ASN A 54 LYS A 58 -1 N VAL A 56 O ILE A 67 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1