HEADER STRUCTURAL GENOMICS 29-MAY-07 2JQ4 TITLE COMPLETE RESONANCE ASSIGNMENTS AND SOLUTION STRUCTURE CALCULATION OF TITLE 2 ATC2521 (NESG ID: ATT6) FROM AGROBACTERIUM TUMEFACIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN ATU2571; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AGR_C_4658P; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_TAXID: 358; SOURCE 4 STRAIN: STRAIN C58 / ATCC 33970; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: BL21-CODONPLUS(DE3)-RP KEYWDS AGROBACTERIUM TUMEFACIENS, ATC2521, UNKNOWN FUNCTION, ATC, STRUCTURAL KEYWDS 2 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.SRISAILAM,A.LEMAK,A.YEE,M.D.KARRA,J.A.LUKIN,C.H.ARROWSMITH, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 20-DEC-23 2JQ4 1 REMARK REVDAT 4 19-FEB-20 2JQ4 1 REMARK SEQADV REVDAT 3 18-JAN-12 2JQ4 1 REMARK VERSN REVDAT 2 24-FEB-09 2JQ4 1 VERSN REVDAT 1 12-JUN-07 2JQ4 0 JRNL AUTH S.SRISAILAM,A.LEMAK,A.YEE,M.D.KARRA,J.A.LUKIN,C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF A PROTEIN (ATC2521)OF UNKNOWN FUNCTION JRNL TITL 2 FROM AGROBACTERIUM TUMEFACIENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.LEMAK,A.GUTMANAS,S.CHITAYAT,M.KARRA,C.FARES,M.SUNNERHAGEN, REMARK 1 AUTH 2 C.H.ARROWSMITH REMARK 1 TITL A NOVEL STRATEGY FOR NMR RESONANCE ASSIGNMENT AND PROTEIN REMARK 1 TITL 2 STRUCTURE DETERMINATION. REMARK 1 REF J.BIOMOL.NMR V. 49 27 2011 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 21161328 REMARK 1 DOI 10.1007/S10858-010-9458-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, CNS REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JQ4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000100148. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.3 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 ATC2521, 10 MM TRIS, 5 % REMARK 210 GLYCEROL, 1 MM BENZAMIDINE, 300 REMARK 210 MM SODIUM CHLORIDE, 0.01 % REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; 1 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 ATC2521, 10 MM TRIS, 5 % REMARK 210 GLYCEROL, 1 MM BENZAMIDINE, 300 REMARK 210 MM SODIUM CHLORIDE, 0.01 % REMARK 210 SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D HNCA; REMARK 210 3D HBHA(CO)NH; 3D C(CO)NH; 3D REMARK 210 H(CCO)NH; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, CYANA REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 16 20.21 -79.64 REMARK 500 1 ASP A 50 -73.97 -179.36 REMARK 500 2 GLN A 14 34.85 -84.20 REMARK 500 2 ILE A 22 -168.34 -108.47 REMARK 500 2 ASP A 27 94.46 -64.18 REMARK 500 2 ASP A 50 -68.85 -177.60 REMARK 500 2 ASN A 59 -35.13 164.63 REMARK 500 3 ASP A 50 -66.96 -178.64 REMARK 500 3 ASN A 59 78.91 56.38 REMARK 500 4 LYS A 11 -66.26 -108.84 REMARK 500 4 GLN A 14 43.77 -79.55 REMARK 500 4 ASP A 50 -70.83 -177.34 REMARK 500 4 LEU A 58 79.21 -68.51 REMARK 500 5 ASP A 50 -68.90 -177.65 REMARK 500 5 LYS A 61 -8.98 -59.86 REMARK 500 6 ASP A 50 -72.56 -179.02 REMARK 500 6 GLU A 81 87.52 64.17 REMARK 500 7 ASP A 50 -71.47 -174.61 REMARK 500 7 LEU A 57 14.86 -142.24 REMARK 500 7 LEU A 58 31.43 -76.72 REMARK 500 7 SER A 65 75.86 -115.52 REMARK 500 8 ASP A 50 -62.40 -178.65 REMARK 500 9 ASP A 50 -66.81 -177.37 REMARK 500 9 LEU A 58 86.58 -64.16 REMARK 500 10 ASP A 27 96.90 -67.34 REMARK 500 10 ASP A 50 -69.32 -179.78 REMARK 500 10 LEU A 58 92.03 -64.21 REMARK 500 10 LYS A 80 -76.85 58.93 REMARK 500 10 GLU A 81 14.87 -155.06 REMARK 500 11 ASP A 50 -66.58 -179.02 REMARK 500 12 LYS A 11 -64.69 -105.14 REMARK 500 12 ASP A 50 -69.61 -177.24 REMARK 500 13 GLN A 14 42.35 -85.66 REMARK 500 13 LEU A 33 107.02 -59.37 REMARK 500 13 ASP A 50 -70.34 -179.48 REMARK 500 13 LYS A 61 -8.93 -56.30 REMARK 500 14 ASP A 50 -69.13 -177.63 REMARK 500 15 ASP A 50 -65.26 -178.62 REMARK 500 15 LEU A 58 89.74 -63.30 REMARK 500 16 ASP A 50 -66.67 -179.69 REMARK 500 16 LEU A 58 86.25 -67.50 REMARK 500 16 LYS A 80 -63.53 -91.22 REMARK 500 17 LEU A 33 109.51 -59.23 REMARK 500 17 ASP A 50 -67.50 -179.00 REMARK 500 17 LYS A 80 -70.35 -59.88 REMARK 500 17 GLU A 81 34.86 -92.51 REMARK 500 18 LYS A 11 -62.36 -106.29 REMARK 500 18 LEU A 33 106.37 -59.72 REMARK 500 18 ASP A 50 -70.44 -177.59 REMARK 500 19 GLN A 14 47.20 -82.07 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15269 RELATED DB: BMRB REMARK 900 RELATED ID: ATT6 RELATED DB: TARGETDB DBREF 2JQ4 A 1 83 UNP Q8UCC7 Q8UCC7_AGRT5 1 83 SEQADV 2JQ4 MET A -21 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 GLY A -20 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 SER A -19 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 SER A -18 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 HIS A -17 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 HIS A -16 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 HIS A -15 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 HIS A -14 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 HIS A -13 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 HIS A -12 UNP Q8UCC7 EXPRESSION TAG SEQADV 2JQ4 SER A -11 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 SER A -10 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 GLY A -9 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 ARG A -8 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 GLU A -7 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 ASN A -6 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 LEU A -5 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 TYR A -4 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 PHE A -3 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 GLN A -2 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 GLY A -1 UNP Q8UCC7 CLONING ARTIFACT SEQADV 2JQ4 HIS A 0 UNP Q8UCC7 CLONING ARTIFACT SEQRES 1 A 105 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 105 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET ASN ALA THR SEQRES 3 A 105 ILE ARG GLU ILE LEU ALA LYS PHE GLY GLN LEU PRO THR SEQRES 4 A 105 PRO VAL ASP THR ILE ALA ASP GLU ALA ASP LEU TYR ALA SEQRES 5 A 105 ALA GLY LEU SER SER PHE ALA SER VAL GLN LEU MET LEU SEQRES 6 A 105 GLY ILE GLU GLU ALA PHE ASP ILE GLU PHE PRO ASP ASN SEQRES 7 A 105 LEU LEU ASN ARG LYS SER PHE ALA SER ILE LYS ALA ILE SEQRES 8 A 105 GLU ASP THR VAL LYS LEU ILE LEU ASP GLY LYS GLU ALA SEQRES 9 A 105 ALA HELIX 1 1 MET A 1 PHE A 12 1 12 HELIX 2 2 PRO A 18 ILE A 22 5 5 HELIX 3 3 ASP A 27 GLY A 32 5 6 HELIX 4 4 SER A 34 ASP A 50 1 17 HELIX 5 5 PRO A 54 ASN A 59 1 6 HELIX 6 6 ARG A 60 ALA A 64 5 5 HELIX 7 7 SER A 65 GLY A 79 1 15 HELIX 8 8 LYS A 80 ALA A 83 5 4 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1