data_2JSN # _entry.id 2JSN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JSN pdb_00002jsn 10.2210/pdb2jsn/pdb RCSB RCSB100239 ? ? WWPDB D_1000100239 ? ? BMRB 15370 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 15370 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2JSN _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-10 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Feng, Y.' 1 'Fan, S.' 2 'Gong, W.' 3 'Xia, B.' 4 # _citation.id primary _citation.title 'Solution structure of synbindin atypical PDZ domain and interaction with syndecan-2' _citation.journal_abbrev 'PROTEIN AND PEPTIDE LETTERS' _citation.journal_volume 16 _citation.page_first 189 _citation.page_last 195 _citation.year 2009 _citation.journal_id_ASTM PPELEN _citation.country NE _citation.journal_id_ISSN 0929-8665 _citation.journal_id_CSD 2077 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19200043 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fan, S.' 1 ? primary 'Feng, Y.' 2 ? primary 'Wei, Z.' 3 ? primary 'Xia, B.' 4 ? primary 'Gong, W.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Trafficking protein particle complex subunit 4' _entity.formula_weight 10820.211 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 19-106' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Synbindin, TRS23 homolog, Hematopoietic stem/progenitor cell protein 172' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGHHHHHHLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPA NYPVSIRFGRPRLTSN ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPA NYPVSIRFGRPRLTSN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 LEU n 1 10 ASP n 1 11 SER n 1 12 TYR n 1 13 ALA n 1 14 PRO n 1 15 ARG n 1 16 ALA n 1 17 GLU n 1 18 ALA n 1 19 GLU n 1 20 LYS n 1 21 THR n 1 22 PHE n 1 23 SER n 1 24 TYR n 1 25 PRO n 1 26 LEU n 1 27 ASP n 1 28 LEU n 1 29 LEU n 1 30 LEU n 1 31 LYS n 1 32 LEU n 1 33 HIS n 1 34 ASP n 1 35 GLU n 1 36 ARG n 1 37 VAL n 1 38 LEU n 1 39 VAL n 1 40 ALA n 1 41 PHE n 1 42 GLY n 1 43 GLN n 1 44 ARG n 1 45 ASP n 1 46 GLY n 1 47 ILE n 1 48 ARG n 1 49 VAL n 1 50 GLY n 1 51 HIS n 1 52 ALA n 1 53 VAL n 1 54 LEU n 1 55 ALA n 1 56 ILE n 1 57 ASN n 1 58 GLY n 1 59 MET n 1 60 ASP n 1 61 VAL n 1 62 ASN n 1 63 GLY n 1 64 ARG n 1 65 TYR n 1 66 THR n 1 67 ALA n 1 68 ASP n 1 69 GLY n 1 70 LYS n 1 71 GLU n 1 72 VAL n 1 73 LEU n 1 74 GLU n 1 75 TYR n 1 76 LEU n 1 77 GLY n 1 78 ASN n 1 79 PRO n 1 80 ALA n 1 81 ASN n 1 82 TYR n 1 83 PRO n 1 84 VAL n 1 85 SER n 1 86 ILE n 1 87 ARG n 1 88 PHE n 1 89 GLY n 1 90 ARG n 1 91 PRO n 1 92 ARG n 1 93 LEU n 1 94 THR n 1 95 SER n 1 96 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TRAPPC4, SBDN' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET28 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TPPC4_HUMAN _struct_ref.pdbx_db_accession Q9Y296 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRF GRPRLTSN ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JSN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y296 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 9 _struct_ref_seq.pdbx_auth_seq_align_end 96 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JSN MET A 1 ? UNP Q9Y296 ? ? 'expression tag' 1 1 1 2JSN GLY A 2 ? UNP Q9Y296 ? ? 'expression tag' 2 2 1 2JSN HIS A 3 ? UNP Q9Y296 ? ? 'expression tag' 3 3 1 2JSN HIS A 4 ? UNP Q9Y296 ? ? 'expression tag' 4 4 1 2JSN HIS A 5 ? UNP Q9Y296 ? ? 'expression tag' 5 5 1 2JSN HIS A 6 ? UNP Q9Y296 ? ? 'expression tag' 6 6 1 2JSN HIS A 7 ? UNP Q9Y296 ? ? 'expression tag' 7 7 1 2JSN HIS A 8 ? UNP Q9Y296 ? ? 'expression tag' 8 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HNCACB' 1 5 1 '3D HNCA' 1 6 1 '3D HNCO' 1 7 1 '3D HCCH-TOCSY' 1 8 1 '3D HBHA(CO)NH' 1 9 1 '2D CB(CGCD)HD' 1 10 1 '3D HN(CA)CO' 1 11 1 '3D 1H-15N TOCSY' 1 12 1 '3D 1H-15N NOESY' 1 13 1 '3D 1H-13C NOESY' 1 14 1 '3D HCCH-COSY' 1 15 1 '3D CCH-TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.05 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2JSN _pdbx_nmr_refine.method 'molecular dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JSN _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JSN _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection XwinNMR ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 'Johnson, One Moon Scientific' processing NMRView ? 3 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 4 'Duggan, Legge, Dyson & Wright' refinement SANE ? 5 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll' refinement Amber ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2JSN _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2JSN _struct.title 'Solution structure of the atypical PDZ-like domain of synbindin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JSN _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'Protein Interaction, PROTEIN TRANSPORT' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 71 ? ASN A 78 ? GLU A 71 ASN A 78 1 ? 8 HELX_P HELX_P2 2 PRO A 79 ? TYR A 82 ? PRO A 79 TYR A 82 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 1 -10.07 2 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 2 -5.06 3 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 3 -0.68 4 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 4 -9.61 5 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 5 -6.65 6 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 6 -7.87 7 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 7 -10.42 8 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 8 -10.16 9 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 9 -5.19 10 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 10 -8.81 11 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 11 -6.83 12 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 12 6.36 13 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 13 -10.30 14 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 14 5.10 15 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 15 -10.24 16 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 16 -10.13 17 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 17 -5.40 18 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 18 -10.44 19 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 19 -10.30 20 TYR 24 A . ? TYR 24 A PRO 25 A ? PRO 25 A 20 -7.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 20 ? PHE A 22 ? LYS A 20 PHE A 22 A 2 VAL A 84 ? GLY A 89 ? VAL A 84 GLY A 89 A 3 ALA A 52 ? ILE A 56 ? ALA A 52 ILE A 56 A 4 MET A 59 ? ASP A 60 ? MET A 59 ASP A 60 B 1 LEU A 29 ? HIS A 33 ? LEU A 29 HIS A 33 B 2 ARG A 36 ? PHE A 41 ? ARG A 36 PHE A 41 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 20 ? N LYS A 20 O ILE A 86 ? O ILE A 86 A 2 3 O GLY A 89 ? O GLY A 89 N ALA A 52 ? N ALA A 52 A 3 4 N ILE A 56 ? N ILE A 56 O MET A 59 ? O MET A 59 B 1 2 N LYS A 31 ? N LYS A 31 O LEU A 38 ? O LEU A 38 # _atom_sites.entry_id 2JSN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ASN 96 96 96 ASN ASN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-19 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Database references' 7 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' pdbx_struct_assembly 6 3 'Structure model' pdbx_struct_oper_list 7 3 'Structure model' struct_ref_seq_dif 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id apd 1 mM '[U-13C; U-15N]' 1 'potassium phosphate' 50 mM ? 1 DSS 0.01 % ? 1 'sodium azide' 0.01 % ? 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 117.17 120.30 -3.13 0.50 N 2 3 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 117.15 120.30 -3.15 0.50 N 3 9 NE A ARG 92 ? ? CZ A ARG 92 ? ? NH1 A ARG 92 ? ? 123.92 120.30 3.62 0.50 N 4 11 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 116.72 120.30 -3.58 0.50 N 5 18 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 117.01 120.30 -3.29 0.50 N 6 19 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 117.17 120.30 -3.13 0.50 N 7 20 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH2 A ARG 87 ? ? 116.94 120.30 -3.36 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 14 ? ? -49.21 150.69 2 1 ASP A 45 ? ? -152.30 -38.82 3 1 ILE A 47 ? ? -70.29 31.95 4 1 ARG A 48 ? ? -136.77 -42.24 5 1 LEU A 54 ? ? -130.12 -35.17 6 1 ASN A 57 ? ? 42.92 24.20 7 2 HIS A 5 ? ? 54.17 17.56 8 2 PRO A 14 ? ? -59.59 -0.67 9 2 ARG A 15 ? ? -56.81 -9.53 10 2 LEU A 26 ? ? 48.04 -75.54 11 2 ASP A 27 ? ? -166.65 -28.34 12 2 ARG A 64 ? ? -149.42 25.49 13 2 SER A 95 ? ? -78.67 36.64 14 3 HIS A 4 ? ? 65.79 -37.39 15 3 LEU A 26 ? ? 37.70 -91.39 16 3 ASP A 27 ? ? -160.58 -38.79 17 3 ARG A 44 ? ? 62.28 168.49 18 3 ASN A 57 ? ? 40.15 27.55 19 4 ASN A 57 ? ? 49.60 28.84 20 5 ASP A 10 ? ? -146.97 -21.82 21 5 GLU A 35 ? ? 59.36 6.86 22 5 ARG A 44 ? ? 64.31 -33.54 23 5 ASN A 57 ? ? 36.83 34.58 24 5 ARG A 64 ? ? -145.23 23.16 25 6 HIS A 4 ? ? 66.87 -46.02 26 6 ALA A 18 ? ? 72.82 166.64 27 6 LEU A 26 ? ? 44.52 -123.59 28 6 ASP A 27 ? ? -153.55 43.85 29 6 ILE A 47 ? ? -141.83 54.89 30 6 PRO A 91 ? ? -55.24 -170.35 31 7 TYR A 12 ? ? -158.36 -13.97 32 7 ARG A 15 ? ? 56.82 112.07 33 7 LEU A 28 ? ? -160.17 13.90 34 7 SER A 95 ? ? -158.16 10.16 35 8 ASP A 10 ? ? -146.22 -31.87 36 8 TYR A 12 ? ? -144.63 -47.05 37 8 GLU A 19 ? ? 47.98 -155.80 38 8 ILE A 47 ? ? -153.04 -38.12 39 9 HIS A 6 ? ? -68.29 90.10 40 9 HIS A 8 ? ? -66.78 12.57 41 9 ASP A 10 ? ? -58.99 -6.22 42 9 ALA A 13 ? ? -143.00 -25.35 43 9 ILE A 47 ? ? -146.31 -25.84 44 9 ASN A 57 ? ? 41.69 26.25 45 10 HIS A 3 ? ? -74.92 35.51 46 10 HIS A 7 ? ? -83.00 46.55 47 10 HIS A 8 ? ? -153.54 -53.13 48 10 ASP A 10 ? ? -134.45 -33.84 49 10 TYR A 12 ? ? 64.05 101.80 50 10 ARG A 15 ? ? -148.69 46.28 51 10 GLU A 35 ? ? 55.53 15.55 52 11 HIS A 6 ? ? 67.11 172.11 53 11 ALA A 16 ? ? -139.85 -37.92 54 11 GLU A 35 ? ? 55.69 16.10 55 11 ASP A 45 ? ? -153.20 -37.99 56 12 PRO A 14 ? ? -56.41 -6.01 57 12 ASN A 57 ? ? 49.93 29.13 58 13 HIS A 8 ? ? -157.00 -32.86 59 13 ARG A 15 ? ? -109.14 41.65 60 13 ARG A 44 ? ? 67.09 -47.13 61 13 LEU A 54 ? ? -132.62 -41.50 62 14 ALA A 16 ? ? -145.46 19.74 63 14 ILE A 47 ? ? -70.59 33.85 64 14 ASN A 57 ? ? 49.56 28.20 65 15 HIS A 4 ? ? 54.91 -168.57 66 15 ASP A 10 ? ? 54.81 -16.65 67 15 GLU A 35 ? ? 56.50 16.43 68 15 ARG A 36 ? ? -126.38 -169.70 69 15 ASP A 45 ? ? 64.44 -25.15 70 15 THR A 94 ? ? -141.43 27.82 71 16 LEU A 26 ? ? -161.54 -58.02 72 16 LEU A 28 ? ? -145.32 31.56 73 16 GLN A 43 ? ? -157.38 38.08 74 16 ILE A 47 ? ? -144.25 26.53 75 16 LEU A 93 ? ? 64.14 -36.58 76 17 HIS A 4 ? ? -80.09 33.77 77 17 ALA A 13 ? ? -148.23 -38.51 78 17 ARG A 15 ? ? -82.99 45.09 79 17 ARG A 48 ? ? -75.33 20.27 80 17 ASN A 57 ? ? 47.27 21.58 81 17 PRO A 91 ? ? -49.94 157.34 82 18 ARG A 92 ? ? 55.90 -174.65 83 19 ALA A 16 ? ? -152.47 -42.55 84 19 GLU A 35 ? ? 55.23 17.57 85 19 ASP A 45 ? ? 62.74 -26.40 86 19 PRO A 91 ? ? -48.49 160.64 87 20 ALA A 13 ? ? -145.83 -21.92 88 20 ALA A 16 ? ? -166.15 -82.53 89 20 GLU A 17 ? ? 35.84 51.62 90 20 GLU A 35 ? ? 59.44 0.43 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 5 ARG A 15 ? ? 0.107 'SIDE CHAIN' 2 6 ARG A 90 ? ? 0.087 'SIDE CHAIN' 3 7 ARG A 36 ? ? 0.081 'SIDE CHAIN' 4 12 ARG A 36 ? ? 0.117 'SIDE CHAIN' 5 15 ARG A 92 ? ? 0.082 'SIDE CHAIN' 6 20 ARG A 64 ? ? 0.079 'SIDE CHAIN' #