HEADER CELL ADHESION 27-JUL-07 2JTD TITLE SKELEMIN IMMUNOGLOBULIN C2 LIKE DOMAIN 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOMESIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES:1207-1328; COMPND 5 SYNONYM: SKELEMIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MYOM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS SKELEMIN, IMMUNOGLOBULIN DOMAIN, MUSCLE PROTEIN, THICK FILAMENT, KEYWDS 2 IMMUNE SYSTEM, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.DESHMUKH,O.VINOGRADOVA REVDAT 4 16-MAR-22 2JTD 1 REMARK SEQADV REVDAT 3 19-MAY-09 2JTD 1 JRNL REVDAT 2 24-FEB-09 2JTD 1 VERSN REVDAT 1 04-SEP-07 2JTD 0 JRNL AUTH L.DESHMUKH,S.TYUKHTENKO,J.LIU,J.E.FOX,J.QIN,O.VINOGRADOVA JRNL TITL STRUCTURAL INSIGHT INTO THE INTERACTION BETWEEN PLATELET JRNL TITL 2 INTEGRIN ALPHAIIBBETA3 AND CYTOSKELETAL PROTEIN SKELEMIN. JRNL REF J.BIOL.CHEM. V. 282 32349 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17804417 JRNL DOI 10.1074/JBC.M704666200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: LINGE ET AL,PROTEINS:STRUCTURE, REMARK 3 FUNCTION AND GENETICS 50:496-506(2003) REMARK 4 REMARK 4 2JTD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000100265. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.7 MM POTASSIUM CHLORIDE, 140 REMARK 210 MM SODIUM CHLORIDE, 10 MM SODIUM REMARK 210 PHOSPHATE, 1.8 MM POTASSIUM REMARK 210 PHOSPHATE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 HCCH-TOCSY; 3D HNHA; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D H(CC) REMARK 210 (CO) NH; 3D (H) CC (CO) NH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : REFINEMENT IN EXPLICIT SOLVENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 60 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 64 OE2 GLU A 88 1.56 REMARK 500 OD1 ASP A 111 HZ2 LYS A 114 1.58 REMARK 500 HZ3 LYS A 5 OE2 GLU A 81 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 2 -56.25 -166.59 REMARK 500 1 HIS A 14 -59.69 -127.45 REMARK 500 1 PRO A 17 -77.41 -14.45 REMARK 500 1 LEU A 44 -60.46 -109.29 REMARK 500 1 ALA A 48 97.01 68.29 REMARK 500 1 GLU A 81 -92.52 -97.94 REMARK 500 1 LYS A 82 152.05 177.23 REMARK 500 1 LEU A 83 -73.02 -117.74 REMARK 500 2 SER A 11 47.18 -98.21 REMARK 500 2 GLN A 12 147.92 69.49 REMARK 500 2 HIS A 14 28.11 173.29 REMARK 500 2 PRO A 17 43.31 -66.31 REMARK 500 2 PRO A 20 52.11 -67.81 REMARK 500 2 THR A 21 -90.33 -151.96 REMARK 500 2 LYS A 22 14.59 -162.60 REMARK 500 2 ARG A 71 -50.86 -143.65 REMARK 500 2 GLU A 81 -99.44 -128.39 REMARK 500 2 LEU A 83 -77.15 -96.99 REMARK 500 2 LYS A 99 -45.43 -138.71 REMARK 500 3 SER A 46 30.68 -70.71 REMARK 500 3 LYS A 82 162.06 166.82 REMARK 500 3 LEU A 83 -72.44 -137.42 REMARK 500 3 LYS A 99 -66.15 -127.60 REMARK 500 4 LEU A 10 98.91 -66.66 REMARK 500 4 GLN A 12 93.54 64.96 REMARK 500 4 HIS A 14 105.15 -161.98 REMARK 500 4 THR A 21 -172.52 177.89 REMARK 500 4 LEU A 44 -73.23 -109.48 REMARK 500 4 SER A 46 -84.27 -162.67 REMARK 500 4 PRO A 63 -75.60 -53.43 REMARK 500 4 GLU A 81 -61.52 -134.10 REMARK 500 4 LYS A 82 161.53 179.16 REMARK 500 4 LEU A 83 -72.41 -149.86 REMARK 500 4 LYS A 99 -35.37 -134.58 REMARK 500 5 PRO A 17 -159.18 -98.62 REMARK 500 5 LEU A 44 -86.08 -108.77 REMARK 500 5 SER A 46 -97.29 -165.38 REMARK 500 5 GLU A 81 -62.80 -129.76 REMARK 500 5 LYS A 82 154.05 175.03 REMARK 500 5 LEU A 83 -70.00 -132.76 REMARK 500 5 ASP A 97 -163.32 -109.54 REMARK 500 5 LYS A 99 -29.49 76.59 REMARK 500 5 ALA A 120 -67.01 -93.45 REMARK 500 6 GLU A 13 32.48 -89.90 REMARK 500 6 PRO A 17 49.90 -75.78 REMARK 500 6 PRO A 20 30.96 -72.38 REMARK 500 6 SER A 46 -175.87 -175.70 REMARK 500 6 GLU A 56 -19.57 77.81 REMARK 500 6 PRO A 63 -61.92 -92.03 REMARK 500 6 THR A 73 -37.78 -135.14 REMARK 500 REMARK 500 THIS ENTRY HAS 130 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2JTD A 1 122 UNP Q62234 MYOM1_MOUSE 1207 1328 SEQADV 2JTD GLY A -19 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -18 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -17 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -16 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -15 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -14 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -13 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -12 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -11 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -10 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -9 UNP Q62234 EXPRESSION TAG SEQADV 2JTD GLY A -8 UNP Q62234 EXPRESSION TAG SEQADV 2JTD LEU A -7 UNP Q62234 EXPRESSION TAG SEQADV 2JTD VAL A -6 UNP Q62234 EXPRESSION TAG SEQADV 2JTD PRO A -5 UNP Q62234 EXPRESSION TAG SEQADV 2JTD ARG A -4 UNP Q62234 EXPRESSION TAG SEQADV 2JTD GLY A -3 UNP Q62234 EXPRESSION TAG SEQADV 2JTD SER A -2 UNP Q62234 EXPRESSION TAG SEQADV 2JTD HIS A -1 UNP Q62234 EXPRESSION TAG SEQADV 2JTD MET A 0 UNP Q62234 EXPRESSION TAG SEQRES 1 A 142 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 142 VAL PRO ARG GLY SER HIS MET GLU GLU GLU MET LYS ARG SEQRES 3 A 142 LEU LEU ALA LEU SER GLN GLU HIS LYS PHE PRO THR VAL SEQRES 4 A 142 PRO THR LYS SER GLU LEU ALA VAL GLU ILE LEU GLU LYS SEQRES 5 A 142 GLY GLN VAL ARG PHE TRP MET GLN ALA GLU LYS LEU SER SEQRES 6 A 142 SER ASN ALA LYS VAL SER TYR ILE PHE ASN GLU LYS GLU SEQRES 7 A 142 ILE PHE GLU GLY PRO LYS TYR LYS MET HIS ILE ASP ARG SEQRES 8 A 142 ASN THR GLY ILE ILE GLU MET PHE MET GLU LYS LEU GLN SEQRES 9 A 142 ASP GLU ASP GLU GLY THR TYR THR PHE GLN ILE GLN ASP SEQRES 10 A 142 GLY LYS ALA THR GLY HIS SER THR LEU VAL LEU ILE GLY SEQRES 11 A 142 ASP VAL TYR LYS LYS LEU GLN LYS GLU ALA GLU PHE HELIX 1 1 MET A 4 LEU A 10 1 7 HELIX 2 2 ILE A 109 GLU A 121 1 13 SHEET 1 A 4 GLU A 24 LEU A 30 0 SHEET 2 A 4 GLN A 34 GLN A 40 -1 O ARG A 36 N GLU A 28 SHEET 3 A 4 ILE A 76 MET A 80 -1 O MET A 78 N PHE A 37 SHEET 4 A 4 MET A 67 ILE A 69 -1 N HIS A 68 O GLU A 77 SHEET 1 B 4 LYS A 57 GLU A 58 0 SHEET 2 B 4 LYS A 49 PHE A 54 -1 N PHE A 54 O LYS A 57 SHEET 3 B 4 THR A 90 ASP A 97 -1 O THR A 92 N ILE A 53 SHEET 4 B 4 ALA A 100 VAL A 107 -1 O LEU A 106 N TYR A 91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1