HEADER METAL BINDING PROTEIN/SIGNALING PROTEIN 11-AUG-07 2JU0 TITLE STRUCTURE OF YEAST FREQUENIN BOUND TO PDTINS 4-KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM-BINDING PROTEIN NCS-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PHOSPHATIDYLINOSITOL 4-KINASE PIK1; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: RESIDUES:121-174; COMPND 9 SYNONYM: PI4-KINASE, PTDINS-4-KINASE; COMPND 10 EC: 2.7.1.67; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: FRQ1, NCS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET23A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 4932; SOURCE 15 GENE: PIK1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_VECTOR: PET23A KEYWDS EF-HAND, CALCIUM, PTDINS 4-KINASE, FREQUENIN, YEAST, LIPOPROTEIN, KEYWDS 2 MEMBRANE, MYRISTATE, NUCLEUS, PHOSPHORYLATION, TRANSFERASE, METAL KEYWDS 3 BINDING PROTEIN-SIGNALING PROTEIN COMPLEX EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR J.AMES REVDAT 4 16-MAR-22 2JU0 1 REMARK REVDAT 3 24-FEB-09 2JU0 1 VERSN REVDAT 2 06-MAY-08 2JU0 1 JRNL REVDAT 1 28-AUG-07 2JU0 0 JRNL AUTH T.STRAHL,I.G.HUTTNER,J.D.LUSIN,M.OSAWA,D.KING,J.THORNER, JRNL AUTH 2 J.B.AMES JRNL TITL STRUCTURAL INSIGHTS INTO ACTIVATION OF PHOSPHATIDYLINOSITOL JRNL TITL 2 4-KINASE (PIK1) BY YEAST FREQUENIN (FRQ1). JRNL REF J.BIOL.CHEM. V. 282 30949 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17720810 JRNL DOI 10.1074/JBC.M705499200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JU0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000100288. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 15 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] FRQ1, 0.5 REMARK 210 MM PIK1, 10 MM SODIUM ACETATE, 1 REMARK 210 MM [U-2H] DTT, 5 MM CALCIUM REMARK 210 CHLORIDE, 95% H2O/5% D2O; 0.5 MM REMARK 210 FRQ1, 0.5 MM [U-13C; U-15N] PIK1, REMARK 210 10 MM SODIUM ACETATE, 1 MM [U- REMARK 210 2H] DTT, 5 MM CALCIUM CHLORIDE, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D C(CO) REMARK 210 NH; 3D HBHA(CO)NH; 3D H(CCO)NH; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 178 REMARK 465 ILE A 179 REMARK 465 ILE A 180 REMARK 465 GLY A 181 REMARK 465 ALA A 182 REMARK 465 LEU A 183 REMARK 465 ASN A 184 REMARK 465 LEU A 185 REMARK 465 TYR A 186 REMARK 465 ASP A 187 REMARK 465 GLY A 188 REMARK 465 LEU A 189 REMARK 465 ILE A 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 152 H MET A 156 1.47 REMARK 500 O ASP A 23 H GLU A 26 1.53 REMARK 500 OD2 ASP B 147 HD22 ASN B 149 1.57 REMARK 500 OD1 ASP A 157 HD22 ASN A 159 1.58 REMARK 500 O GLY A 133 H VAL A 136 1.58 REMARK 500 OD1 ASP A 73 H ASN A 76 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 TRP A 30 CG TRP A 30 CD2 -0.121 REMARK 500 1 HIS A 31 CG HIS A 31 ND1 -0.121 REMARK 500 1 HIS A 67 CG HIS A 67 ND1 -0.120 REMARK 500 1 HIS A 81 CG HIS A 81 ND1 -0.120 REMARK 500 1 TRP A 103 CG TRP A 103 CD2 -0.121 REMARK 500 1 HIS A 112 CG HIS A 112 ND1 -0.119 REMARK 500 1 HIS B 153 CG HIS B 153 ND1 -0.121 REMARK 500 2 TRP A 30 CG TRP A 30 CD2 -0.116 REMARK 500 2 HIS A 31 CG HIS A 31 ND1 -0.123 REMARK 500 2 HIS A 67 CG HIS A 67 ND1 -0.121 REMARK 500 2 HIS A 81 CG HIS A 81 ND1 -0.121 REMARK 500 2 TRP A 103 CG TRP A 103 CD2 -0.123 REMARK 500 2 HIS A 112 CG HIS A 112 ND1 -0.122 REMARK 500 2 HIS B 153 CG HIS B 153 ND1 -0.121 REMARK 500 3 TRP A 30 CG TRP A 30 CD2 -0.120 REMARK 500 3 HIS A 31 CG HIS A 31 ND1 -0.121 REMARK 500 3 HIS A 67 CG HIS A 67 ND1 -0.120 REMARK 500 3 HIS A 81 CG HIS A 81 ND1 -0.120 REMARK 500 3 TRP A 103 CG TRP A 103 CD2 -0.126 REMARK 500 3 HIS A 112 CG HIS A 112 ND1 -0.120 REMARK 500 3 HIS B 153 CG HIS B 153 ND1 -0.123 REMARK 500 4 TRP A 30 CG TRP A 30 CD2 -0.124 REMARK 500 4 HIS A 31 CG HIS A 31 ND1 -0.120 REMARK 500 4 HIS A 67 CG HIS A 67 ND1 -0.121 REMARK 500 4 HIS A 81 CG HIS A 81 ND1 -0.120 REMARK 500 4 TRP A 103 CG TRP A 103 CD2 -0.123 REMARK 500 4 HIS A 112 CG HIS A 112 ND1 -0.121 REMARK 500 4 HIS B 153 CG HIS B 153 ND1 -0.121 REMARK 500 5 TRP A 30 CG TRP A 30 CD2 -0.117 REMARK 500 5 HIS A 31 CG HIS A 31 ND1 -0.122 REMARK 500 5 HIS A 67 CG HIS A 67 ND1 -0.122 REMARK 500 5 HIS A 81 CG HIS A 81 ND1 -0.120 REMARK 500 5 TRP A 103 CG TRP A 103 CD2 -0.127 REMARK 500 5 HIS A 112 CG HIS A 112 ND1 -0.121 REMARK 500 5 HIS B 153 CG HIS B 153 ND1 -0.120 REMARK 500 6 TRP A 30 CG TRP A 30 CD2 -0.120 REMARK 500 6 HIS A 31 CG HIS A 31 ND1 -0.121 REMARK 500 6 HIS A 67 CG HIS A 67 ND1 -0.121 REMARK 500 6 HIS A 81 CG HIS A 81 ND1 -0.119 REMARK 500 6 TRP A 103 CG TRP A 103 CD2 -0.125 REMARK 500 6 HIS A 112 CG HIS A 112 ND1 -0.121 REMARK 500 6 HIS B 153 CG HIS B 153 ND1 -0.121 REMARK 500 7 TRP A 30 CG TRP A 30 CD2 -0.116 REMARK 500 7 HIS A 31 CG HIS A 31 ND1 -0.121 REMARK 500 7 HIS A 67 CG HIS A 67 ND1 -0.121 REMARK 500 7 HIS A 81 CG HIS A 81 ND1 -0.120 REMARK 500 7 TRP A 103 CG TRP A 103 CD2 -0.123 REMARK 500 7 HIS A 112 CG HIS A 112 ND1 -0.121 REMARK 500 7 HIS B 153 CG HIS B 153 ND1 -0.122 REMARK 500 8 TRP A 30 CG TRP A 30 CD2 -0.123 REMARK 500 REMARK 500 THIS ENTRY HAS 105 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 TRP A 30 CD1 - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 1 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 1 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.5 DEGREES REMARK 500 1 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 1 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 1 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 1 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.6 DEGREES REMARK 500 1 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 2 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 2 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.3 DEGREES REMARK 500 2 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 2 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 5.0 DEGREES REMARK 500 2 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 2 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.7 DEGREES REMARK 500 2 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.4 DEGREES REMARK 500 3 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 3 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.6 DEGREES REMARK 500 3 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 3 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 3 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 3 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.9 DEGREES REMARK 500 3 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 4 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 4 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.6 DEGREES REMARK 500 4 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 4 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 4 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 4 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.8 DEGREES REMARK 500 4 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 5 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 5 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.3 DEGREES REMARK 500 5 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 5 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 5 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 5 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.8 DEGREES REMARK 500 5 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 6 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.3 DEGREES REMARK 500 6 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.3 DEGREES REMARK 500 6 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 6 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 6 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.6 DEGREES REMARK 500 6 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.9 DEGREES REMARK 500 6 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 7 TRP A 30 CG - CD1 - NE1 ANGL. DEV. = -6.4 DEGREES REMARK 500 7 TRP A 30 NE1 - CE2 - CZ2 ANGL. DEV. = 9.1 DEGREES REMARK 500 7 TRP A 30 NE1 - CE2 - CD2 ANGL. DEV. = -7.2 DEGREES REMARK 500 7 TRP A 103 CD1 - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 7 TRP A 103 CG - CD1 - NE1 ANGL. DEV. = -6.5 DEGREES REMARK 500 7 TRP A 103 NE1 - CE2 - CZ2 ANGL. DEV. = 9.9 DEGREES REMARK 500 7 TRP A 103 NE1 - CE2 - CD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 108 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 5 -124.13 -95.09 REMARK 500 1 SER A 6 -1.74 -158.82 REMARK 500 1 LYS A 7 -175.31 43.57 REMARK 500 1 LEU A 8 28.50 29.57 REMARK 500 1 LYS A 10 -39.24 -145.97 REMARK 500 1 LEU A 16 -106.51 -75.33 REMARK 500 1 LYS A 17 3.61 52.41 REMARK 500 1 GLN A 18 -96.86 -147.09 REMARK 500 1 THR A 20 97.91 -170.37 REMARK 500 1 TYR A 21 40.34 -85.38 REMARK 500 1 PHE A 22 86.35 -175.89 REMARK 500 1 ASP A 23 139.35 -30.04 REMARK 500 1 ARG A 24 -71.40 -29.18 REMARK 500 1 ARG A 25 -9.42 -46.57 REMARK 500 1 CYS A 38 112.20 -164.65 REMARK 500 1 PHE A 56 61.63 -155.84 REMARK 500 1 PHE A 58 -81.77 -40.69 REMARK 500 1 SER A 93 -92.64 -94.66 REMARK 500 1 GLU A 98 14.36 -63.98 REMARK 500 1 HIS A 112 35.20 39.38 REMARK 500 1 LYS A 130 58.63 -90.63 REMARK 500 1 MET A 131 -75.46 -137.50 REMARK 500 1 MET A 135 -19.14 -45.88 REMARK 500 1 ASN A 139 -68.10 -1.49 REMARK 500 1 GLU A 140 104.30 -41.26 REMARK 500 1 ASP A 141 -175.51 59.58 REMARK 500 1 GLU A 142 173.56 63.77 REMARK 500 1 ALA A 143 -152.04 -172.69 REMARK 500 1 THR A 144 159.52 -47.74 REMARK 500 1 GLU A 146 -38.91 -37.16 REMARK 500 1 GLU A 160 74.75 42.82 REMARK 500 1 LYS A 174 -8.82 -52.99 REMARK 500 1 SER B 122 -38.23 -165.88 REMARK 500 1 PHE B 125 -65.50 -90.23 REMARK 500 1 ARG B 129 -70.16 -63.80 REMARK 500 1 THR B 137 153.09 64.43 REMARK 500 1 ASN B 138 179.57 -54.33 REMARK 500 1 PHE B 140 -134.43 -148.52 REMARK 500 1 SER B 143 -139.06 44.28 REMARK 500 1 SER B 144 -68.86 -143.41 REMARK 500 1 ASP B 147 148.78 -173.06 REMARK 500 1 LYS B 148 101.34 -58.42 REMARK 500 1 ASN B 149 -39.94 -159.51 REMARK 500 1 LYS B 151 -62.94 -146.97 REMARK 500 1 SER B 163 -70.50 -73.49 REMARK 500 2 LYS A 4 88.36 50.77 REMARK 500 2 SER A 6 -8.32 -153.53 REMARK 500 2 LEU A 8 161.57 59.15 REMARK 500 2 LYS A 10 -70.35 -162.19 REMARK 500 2 CYS A 15 -70.13 -69.58 REMARK 500 REMARK 500 THIS ENTRY HAS 698 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 24 0.30 SIDE CHAIN REMARK 500 1 ARG A 25 0.22 SIDE CHAIN REMARK 500 1 ARG A 36 0.31 SIDE CHAIN REMARK 500 1 ARG A 45 0.13 SIDE CHAIN REMARK 500 1 ARG A 148 0.32 SIDE CHAIN REMARK 500 1 ARG A 170 0.25 SIDE CHAIN REMARK 500 1 ARG B 129 0.32 SIDE CHAIN REMARK 500 2 ARG A 25 0.11 SIDE CHAIN REMARK 500 2 ARG A 36 0.31 SIDE CHAIN REMARK 500 2 ARG A 45 0.20 SIDE CHAIN REMARK 500 2 ARG A 94 0.32 SIDE CHAIN REMARK 500 2 ARG A 148 0.29 SIDE CHAIN REMARK 500 2 ARG A 170 0.16 SIDE CHAIN REMARK 500 2 ARG B 129 0.26 SIDE CHAIN REMARK 500 2 ARG B 130 0.32 SIDE CHAIN REMARK 500 3 ARG A 24 0.24 SIDE CHAIN REMARK 500 3 ARG A 25 0.24 SIDE CHAIN REMARK 500 3 ARG A 36 0.09 SIDE CHAIN REMARK 500 3 ARG A 45 0.32 SIDE CHAIN REMARK 500 3 ARG A 94 0.24 SIDE CHAIN REMARK 500 3 ARG A 148 0.29 SIDE CHAIN REMARK 500 3 ARG A 170 0.32 SIDE CHAIN REMARK 500 3 ARG B 129 0.30 SIDE CHAIN REMARK 500 4 ARG A 24 0.28 SIDE CHAIN REMARK 500 4 ARG A 25 0.24 SIDE CHAIN REMARK 500 4 ARG A 36 0.25 SIDE CHAIN REMARK 500 4 ARG A 45 0.18 SIDE CHAIN REMARK 500 4 ARG A 94 0.27 SIDE CHAIN REMARK 500 4 ARG A 148 0.17 SIDE CHAIN REMARK 500 4 ARG A 170 0.30 SIDE CHAIN REMARK 500 4 ARG B 129 0.16 SIDE CHAIN REMARK 500 4 ARG B 130 0.29 SIDE CHAIN REMARK 500 5 ARG A 24 0.16 SIDE CHAIN REMARK 500 5 ARG A 25 0.30 SIDE CHAIN REMARK 500 5 ARG A 36 0.21 SIDE CHAIN REMARK 500 5 ARG A 45 0.26 SIDE CHAIN REMARK 500 5 ARG A 94 0.20 SIDE CHAIN REMARK 500 5 ARG A 148 0.26 SIDE CHAIN REMARK 500 5 ARG B 129 0.23 SIDE CHAIN REMARK 500 5 ARG B 130 0.22 SIDE CHAIN REMARK 500 6 ARG A 25 0.32 SIDE CHAIN REMARK 500 6 ARG A 36 0.29 SIDE CHAIN REMARK 500 6 ARG A 45 0.31 SIDE CHAIN REMARK 500 6 ARG A 94 0.32 SIDE CHAIN REMARK 500 6 ARG A 148 0.24 SIDE CHAIN REMARK 500 6 ARG A 170 0.24 SIDE CHAIN REMARK 500 6 ARG B 129 0.27 SIDE CHAIN REMARK 500 6 ARG B 130 0.16 SIDE CHAIN REMARK 500 7 ARG A 24 0.20 SIDE CHAIN REMARK 500 7 ARG A 25 0.31 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 124 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASP A 73 OD2 55.6 REMARK 620 3 ASP A 75 OD2 83.5 133.7 REMARK 620 4 ASN A 77 OD1 80.4 76.2 121.1 REMARK 620 5 PHE A 79 O 113.9 62.4 162.6 64.4 REMARK 620 6 GLU A 84 OE1 57.2 75.0 63.9 137.2 125.0 REMARK 620 7 GLU A 84 OE2 109.0 101.7 69.5 167.3 103.4 51.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD1 REMARK 620 2 ASN A 111 OD1 56.2 REMARK 620 3 ASP A 113 OD2 77.1 54.1 REMARK 620 4 ILE A 116 N 81.9 135.5 106.8 REMARK 620 5 ILE A 116 O 126.3 167.2 137.4 53.1 REMARK 620 6 THR A 117 N 104.4 123.8 176.3 76.8 44.3 REMARK 620 7 THR A 117 OG1 140.9 101.6 118.1 121.6 68.6 58.5 REMARK 620 8 GLU A 120 OE1 57.2 70.9 122.3 100.1 99.5 57.0 86.3 REMARK 620 9 GLU A 120 OE2 89.2 54.5 101.1 147.8 112.9 75.6 53.8 50.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 157 OD1 REMARK 620 2 ASN A 159 OD1 57.7 REMARK 620 3 ASP A 161 OD1 81.0 66.6 REMARK 620 4 TYR A 163 O 122.1 127.3 62.2 REMARK 620 5 GLU A 168 OE1 64.7 91.7 145.5 139.0 REMARK 620 6 GLU A 168 OE2 116.5 122.6 162.5 104.3 52.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 DBREF 2JU0 A 1 190 UNP Q06389 NCS1_YEAST 1 190 DBREF 2JU0 B 121 172 UNP P39104 PIK1_YEAST 121 172 SEQRES 1 A 190 MET GLY ALA LYS THR SER LYS LEU SER LYS ASP ASP LEU SEQRES 2 A 190 THR CYS LEU LYS GLN SER THR TYR PHE ASP ARG ARG GLU SEQRES 3 A 190 ILE GLN GLN TRP HIS LYS GLY PHE LEU ARG ASP CYS PRO SEQRES 4 A 190 SER GLY GLN LEU ALA ARG GLU ASP PHE VAL LYS ILE TYR SEQRES 5 A 190 LYS GLN PHE PHE PRO PHE GLY SER PRO GLU ASP PHE ALA SEQRES 6 A 190 ASN HIS LEU PHE THR VAL PHE ASP LYS ASP ASN ASN GLY SEQRES 7 A 190 PHE ILE HIS PHE GLU GLU PHE ILE THR VAL LEU SER THR SEQRES 8 A 190 THR SER ARG GLY THR LEU GLU GLU LYS LEU SER TRP ALA SEQRES 9 A 190 PHE GLU LEU TYR ASP LEU ASN HIS ASP GLY TYR ILE THR SEQRES 10 A 190 PHE ASP GLU MET LEU THR ILE VAL ALA SER VAL TYR LYS SEQRES 11 A 190 MET MET GLY SER MET VAL THR LEU ASN GLU ASP GLU ALA SEQRES 12 A 190 THR PRO GLU MET ARG VAL LYS LYS ILE PHE LYS LEU MET SEQRES 13 A 190 ASP LYS ASN GLU ASP GLY TYR ILE THR LEU ASP GLU PHE SEQRES 14 A 190 ARG GLU GLY SER LYS VAL ASP PRO SER ILE ILE GLY ALA SEQRES 15 A 190 LEU ASN LEU TYR ASP GLY LEU ILE SEQRES 1 B 52 ALA SER TYR GLY PHE GLN VAL ALA ARG ARG VAL LEU ASN SEQRES 2 B 52 ASN LEU GLN THR ASN LEU PHE ASN THR SER SER GLY SER SEQRES 3 B 52 ASP LYS ASN VAL LYS ILE HIS GLU ASN VAL ALA PRO ALA SEQRES 4 B 52 LEU VAL LEU SER SER MET ILE MET SER ALA ILE ALA PHE HET CA A 500 1 HET CA A 501 1 HET CA A 502 1 HETNAM CA CALCIUM ION FORMUL 3 CA 3(CA 2+) HELIX 1 1 LYS A 10 LYS A 17 1 8 HELIX 2 2 ASP A 23 CYS A 38 1 16 HELIX 3 3 ARG A 45 PHE A 56 1 12 HELIX 4 4 PRO A 61 ASP A 73 1 13 HELIX 5 5 HIS A 81 THR A 92 1 12 HELIX 6 6 GLU A 98 TYR A 108 1 11 HELIX 7 7 PHE A 118 LYS A 130 1 13 HELIX 8 8 GLY A 133 LEU A 138 1 6 HELIX 9 9 THR A 144 ASP A 157 1 14 HELIX 10 10 LEU A 166 VAL A 175 1 10 HELIX 11 11 PHE B 125 GLN B 136 1 12 HELIX 12 12 ASN B 155 ALA B 169 1 15 SHEET 1 A 2 LEU A 43 ALA A 44 0 SHEET 2 A 2 PHE A 79 ILE A 80 -1 O ILE A 80 N LEU A 43 SHEET 1 B 2 TYR A 115 THR A 117 0 SHEET 2 B 2 TYR A 163 THR A 165 -1 O ILE A 164 N ILE A 116 LINK OD1 ASP A 73 CA CA A 500 1555 1555 2.50 LINK OD2 ASP A 73 CA CA A 500 1555 1555 2.13 LINK OD2 ASP A 75 CA CA A 500 1555 1555 2.50 LINK OD1 ASN A 77 CA CA A 500 1555 1555 2.49 LINK O PHE A 79 CA CA A 500 1555 1555 2.51 LINK OE1 GLU A 84 CA CA A 500 1555 1555 2.50 LINK OE2 GLU A 84 CA CA A 500 1555 1555 2.50 LINK OD1 ASP A 109 CA CA A 501 1555 1555 2.60 LINK OD1 ASN A 111 CA CA A 501 1555 1555 2.67 LINK OD2 ASP A 113 CA CA A 501 1555 1555 2.75 LINK N ILE A 116 CA CA A 501 1555 1555 2.96 LINK O ILE A 116 CA CA A 501 1555 1555 2.96 LINK N THR A 117 CA CA A 501 1555 1555 2.89 LINK OG1 THR A 117 CA CA A 501 1555 1555 2.55 LINK OE1 GLU A 120 CA CA A 501 1555 1555 2.54 LINK OE2 GLU A 120 CA CA A 501 1555 1555 2.59 LINK OD1 ASP A 157 CA CA A 502 1555 1555 2.54 LINK OD1 ASN A 159 CA CA A 502 1555 1555 2.50 LINK OD1 ASP A 161 CA CA A 502 1555 1555 2.50 LINK O TYR A 163 CA CA A 502 1555 1555 2.50 LINK OE1 GLU A 168 CA CA A 502 1555 1555 2.45 LINK OE2 GLU A 168 CA CA A 502 1555 1555 2.54 SITE 1 AC1 6 PHE A 72 ASP A 73 LYS A 74 ASP A 75 SITE 2 AC1 6 ASN A 76 ASN A 77 SITE 1 AC2 5 TYR A 108 ASP A 109 TYR A 115 ILE A 116 SITE 2 AC2 5 THR A 117 SITE 1 AC3 2 ASP A 157 ASN A 159 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1