data_2JUE # _entry.id 2JUE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.331 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2JUE RCSB RCSB100302 WWPDB D_1000100302 # _pdbx_database_related.db_id 1nb1 _pdbx_database_related.db_name PDB _pdbx_database_related.details 'This entry contains the all-L version of kalata B1' _pdbx_database_related.content_type unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2JUE _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-08-23 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Daly, N.L.' 1 'Sando, L.' 2 'Craik, D.' 3 # _citation.id primary _citation.title 'A Synthetic mirror image of kalata B1 reveals that cyclotide activity is independent of a protein receptor.' _citation.journal_abbrev Chembiochem _citation.journal_volume 12 _citation.page_first 2456 _citation.page_last 2462 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21928440 _citation.pdbx_database_id_DOI 10.1002/cbic.201100450 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sando, L.' 1 ? primary 'Henriques, S.T.' 2 ? primary 'Foley, F.' 3 ? primary 'Simonsen, S.M.' 4 ? primary 'Daly, N.L.' 5 ? primary 'Hall, K.N.' 6 ? primary 'Gustafson, K.R.' 7 ? primary 'Aguilar, M.I.' 8 ? primary 'Craik, D.J.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Kalata-B1 _entity.formula_weight 2917.345 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 93-121' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(DCY)G(DGL)(DTH)(DCY)(DVA)GG(DTH)(DCY)(DSG)(DTH)(DPR)G(DCY)(DTH)(DCY)(DSN)(DTR) (DPR)(DVA)(DCY)(DTH)(DAR)(DSG)G(DLE)(DPR)(DVA) ; _entity_poly.pdbx_seq_one_letter_code_can CGETCVGGTCNTPGCTCSWPVCTRNGLPV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DCY n 1 2 GLY n 1 3 DGL n 1 4 DTH n 1 5 DCY n 1 6 DVA n 1 7 GLY n 1 8 GLY n 1 9 DTH n 1 10 DCY n 1 11 DSG n 1 12 DTH n 1 13 DPR n 1 14 GLY n 1 15 DCY n 1 16 DTH n 1 17 DCY n 1 18 DSN n 1 19 DTR n 1 20 DPR n 1 21 DVA n 1 22 DCY n 1 23 DTH n 1 24 DAR n 1 25 DSG n 1 26 GLY n 1 27 DLE n 1 28 DPR n 1 29 DVA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'D-amino acids' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KAB1_OLDAF _struct_ref.pdbx_db_accession P56254 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code CGETCVGGTCNTPGCTCSWPVCTRNGLPS _struct_ref.pdbx_align_begin 93 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JUE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 29 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P56254 _struct_ref_seq.db_align_beg 93 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 121 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 29 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2JUE _struct_ref_seq_dif.mon_id DVA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 29 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P56254 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 121 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 29 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DAR 'D-peptide linking' . D-ARGININE ? 'C6 H15 N4 O2 1' 175.209 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DGL 'D-peptide linking' . 'D-GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 DSG 'D-peptide linking' . D-ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DSN 'D-peptide linking' . D-SERINE ? 'C3 H7 N O3' 105.093 DTH 'D-peptide linking' . D-THREONINE ? 'C4 H9 N O3' 119.119 DTR 'D-peptide linking' . D-TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H TOCSY' 1 2 1 '2D DQF-COSY' 1 3 1 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 1 _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 290 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1.6 mM D-kalata B1, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Bruker ARX 1 'Bruker ARX' 600 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2JUE _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details 'Protocol within CNS' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JUE _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JUE _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection XwinNMR 3.5 1 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS ? 2 Goddard 'data analysis' Sparky ? 3 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2JUE _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2JUE _struct.title 'Solution structure of the all-D kalata B1' _struct.pdbx_descriptor 'All-D kalata B1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JUE _struct_keywords.pdbx_keywords 'Antibiotic, plant protein' _struct_keywords.text 'cystine knot, D-amino acid, beta hairpin, cyclic backbone, UNKNOWN FUNCTION, Antibiotic, plant protein' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A DCY 1 SG ? ? ? 1_555 A DCY 15 SG ? ? A DCY 1 A DCY 15 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A DCY 5 SG ? ? ? 1_555 A DCY 17 SG ? ? A DCY 5 A DCY 17 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A DCY 10 SG ? ? ? 1_555 A DCY 22 SG ? ? A DCY 10 A DCY 22 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale both ? A DCY 1 C ? ? ? 1_555 A GLY 2 N ? ? A DCY 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A DCY 1 N ? ? ? 1_555 A DVA 29 C ? ? A DCY 1 A DVA 29 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A GLY 2 C ? ? ? 1_555 A DGL 3 N ? ? A GLY 2 A DGL 3 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A DGL 3 C ? ? ? 1_555 A DTH 4 N ? ? A DGL 3 A DTH 4 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale5 covale both ? A DTH 4 C ? ? ? 1_555 A DCY 5 N ? ? A DTH 4 A DCY 5 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale6 covale both ? A DCY 5 C ? ? ? 1_555 A DVA 6 N ? ? A DCY 5 A DVA 6 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale7 covale both ? A DVA 6 C ? ? ? 1_555 A GLY 7 N ? ? A DVA 6 A GLY 7 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? A GLY 8 C ? ? ? 1_555 A DTH 9 N ? ? A GLY 8 A DTH 9 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale9 covale both ? A DTH 9 C ? ? ? 1_555 A DCY 10 N ? ? A DTH 9 A DCY 10 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? A DCY 10 C ? ? ? 1_555 A DSG 11 N ? ? A DCY 10 A DSG 11 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A DSG 11 C ? ? ? 1_555 A DTH 12 N ? ? A DSG 11 A DTH 12 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale12 covale both ? A DTH 12 C ? ? ? 1_555 A DPR 13 N ? ? A DTH 12 A DPR 13 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale13 covale both ? A DPR 13 C ? ? ? 1_555 A GLY 14 N ? ? A DPR 13 A GLY 14 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale14 covale both ? A GLY 14 C ? ? ? 1_555 A DCY 15 N ? ? A GLY 14 A DCY 15 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale15 covale both ? A DCY 15 C ? ? ? 1_555 A DTH 16 N ? ? A DCY 15 A DTH 16 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale16 covale both ? A DTH 16 C ? ? ? 1_555 A DCY 17 N ? ? A DTH 16 A DCY 17 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale17 covale both ? A DCY 17 C ? ? ? 1_555 A DSN 18 N ? ? A DCY 17 A DSN 18 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale18 covale both ? A DSN 18 C ? ? ? 1_555 A DTR 19 N ? ? A DSN 18 A DTR 19 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale19 covale both ? A DTR 19 C ? ? ? 1_555 A DPR 20 N ? ? A DTR 19 A DPR 20 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale20 covale both ? A DPR 20 C ? ? ? 1_555 A DVA 21 N ? ? A DPR 20 A DVA 21 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? A DVA 21 C ? ? ? 1_555 A DCY 22 N ? ? A DVA 21 A DCY 22 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale22 covale both ? A DCY 22 C ? ? ? 1_555 A DTH 23 N ? ? A DCY 22 A DTH 23 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale23 covale both ? A DTH 23 C ? ? ? 1_555 A DAR 24 N ? ? A DTH 23 A DAR 24 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale24 covale both ? A DAR 24 C ? ? ? 1_555 A DSG 25 N ? ? A DAR 24 A DSG 25 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale25 covale both ? A DSG 25 C ? ? ? 1_555 A GLY 26 N ? ? A DSG 25 A GLY 26 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale26 covale both ? A GLY 26 C ? ? ? 1_555 A DLE 27 N ? ? A GLY 26 A DLE 27 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale27 covale both ? A DLE 27 C ? ? ? 1_555 A DPR 28 N ? ? A DLE 27 A DPR 28 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale28 covale both ? A DPR 28 C ? ? ? 1_555 A DVA 29 N ? ? A DPR 28 A DVA 29 1_555 ? ? ? ? ? ? ? 1.315 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 1 -0.40 2 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 2 -0.46 3 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 3 -0.33 4 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 4 -0.53 5 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 5 -0.52 6 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 6 -0.27 7 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 7 -0.32 8 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 8 -0.34 9 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 9 -0.24 10 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 10 -0.35 11 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 11 -0.30 12 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 12 -0.30 13 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 13 -0.45 14 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 14 -0.46 15 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 15 -0.52 16 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 16 -0.47 17 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 17 -0.52 18 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 18 -0.34 19 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 19 -0.26 20 DTR 19 A . ? DTR 19 A DPR 20 A ? DPR 20 A 20 -0.52 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 DCY A 15 ? DSN A 18 ? DCY A 15 DSN A 18 A 2 DVA A 21 ? DAR A 24 ? DVA A 21 DAR A 24 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id DTH _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 16 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id DTH _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 16 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id DTH _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 23 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id DTH _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 23 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DCY 1 ? 6 'BINDING SITE FOR RESIDUE DCY A 1' AC2 Software A DGL 3 ? 7 'BINDING SITE FOR RESIDUE DGL A 3' AC3 Software A DTH 4 ? 7 'BINDING SITE FOR RESIDUE DTH A 4' AC4 Software A DCY 5 ? 9 'BINDING SITE FOR RESIDUE DCY A 5' AC5 Software A DVA 6 ? 5 'BINDING SITE FOR RESIDUE DVA A 6' AC6 Software A DTH 9 ? 7 'BINDING SITE FOR RESIDUE DTH A 9' AC7 Software A DCY 10 ? 6 'BINDING SITE FOR RESIDUE DCY A 10' AC8 Software A DSG 11 ? 5 'BINDING SITE FOR RESIDUE DSG A 11' AC9 Software A DTH 12 ? 5 'BINDING SITE FOR RESIDUE DTH A 12' BC1 Software A DPR 13 ? 4 'BINDING SITE FOR RESIDUE DPR A 13' BC2 Software A DCY 15 ? 6 'BINDING SITE FOR RESIDUE DCY A 15' BC3 Software A DTH 16 ? 2 'BINDING SITE FOR RESIDUE DTH A 16' BC4 Software A DCY 17 ? 6 'BINDING SITE FOR RESIDUE DCY A 17' BC5 Software A DSN 18 ? 5 'BINDING SITE FOR RESIDUE DSN A 18' BC6 Software A DTR 19 ? 6 'BINDING SITE FOR RESIDUE DTR A 19' BC7 Software A DPR 20 ? 7 'BINDING SITE FOR RESIDUE DPR A 20' BC8 Software A DVA 21 ? 8 'BINDING SITE FOR RESIDUE DVA A 21' BC9 Software A DCY 22 ? 8 'BINDING SITE FOR RESIDUE DCY A 22' CC1 Software A DTH 23 ? 8 'BINDING SITE FOR RESIDUE DTH A 23' CC2 Software A DAR 24 ? 6 'BINDING SITE FOR RESIDUE DAR A 24' CC3 Software A DSG 25 ? 3 'BINDING SITE FOR RESIDUE DSG A 25' CC4 Software A DLE 27 ? 6 'BINDING SITE FOR RESIDUE DLE A 27' CC5 Software A DPR 28 ? 5 'BINDING SITE FOR RESIDUE DPR A 28' CC6 Software A DVA 29 ? 5 'BINDING SITE FOR RESIDUE DVA A 29' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLY A 2 ? GLY A 2 . ? 1_555 ? 2 AC1 6 DGL A 3 ? DGL A 3 . ? 1_555 ? 3 AC1 6 GLY A 14 ? GLY A 14 . ? 1_555 ? 4 AC1 6 DCY A 15 ? DCY A 15 . ? 1_555 ? 5 AC1 6 DAR A 24 ? DAR A 24 . ? 1_555 ? 6 AC1 6 DVA A 29 ? DVA A 29 . ? 1_555 ? 7 AC2 7 DCY A 1 ? DCY A 1 . ? 1_555 ? 8 AC2 7 GLY A 2 ? GLY A 2 . ? 1_555 ? 9 AC2 7 DCY A 10 ? DCY A 10 . ? 1_555 ? 10 AC2 7 DSG A 11 ? DSG A 11 . ? 1_555 ? 11 AC2 7 DTH A 12 ? DTH A 12 . ? 1_555 ? 12 AC2 7 DPR A 20 ? DPR A 20 . ? 1_555 ? 13 AC2 7 DVA A 21 ? DVA A 21 . ? 1_555 ? 14 AC3 7 GLY A 2 ? GLY A 2 . ? 1_555 ? 15 AC3 7 DGL A 3 ? DGL A 3 . ? 1_555 ? 16 AC3 7 DCY A 5 ? DCY A 5 . ? 1_555 ? 17 AC3 7 DVA A 6 ? DVA A 6 . ? 1_555 ? 18 AC3 7 GLY A 8 ? GLY A 8 . ? 1_555 ? 19 AC3 7 DTH A 9 ? DTH A 9 . ? 1_555 ? 20 AC3 7 DPR A 20 ? DPR A 20 . ? 1_555 ? 21 AC4 9 DGL A 3 ? DGL A 3 . ? 1_555 ? 22 AC4 9 DTH A 4 ? DTH A 4 . ? 1_555 ? 23 AC4 9 DVA A 6 ? DVA A 6 . ? 1_555 ? 24 AC4 9 GLY A 7 ? GLY A 7 . ? 1_555 ? 25 AC4 9 GLY A 8 ? GLY A 8 . ? 1_555 ? 26 AC4 9 DTH A 9 ? DTH A 9 . ? 1_555 ? 27 AC4 9 DTH A 16 ? DTH A 16 . ? 1_555 ? 28 AC4 9 DCY A 17 ? DCY A 17 . ? 1_555 ? 29 AC4 9 DSN A 18 ? DSN A 18 . ? 1_555 ? 30 AC5 5 DTH A 4 ? DTH A 4 . ? 1_555 ? 31 AC5 5 DCY A 5 ? DCY A 5 . ? 1_555 ? 32 AC5 5 GLY A 7 ? GLY A 7 . ? 1_555 ? 33 AC5 5 GLY A 8 ? GLY A 8 . ? 1_555 ? 34 AC5 5 DTR A 19 ? DTR A 19 . ? 1_555 ? 35 AC6 7 DGL A 3 ? DGL A 3 . ? 1_555 ? 36 AC6 7 DTH A 4 ? DTH A 4 . ? 1_555 ? 37 AC6 7 DCY A 5 ? DCY A 5 . ? 1_555 ? 38 AC6 7 DVA A 6 ? DVA A 6 . ? 1_555 ? 39 AC6 7 GLY A 7 ? GLY A 7 . ? 1_555 ? 40 AC6 7 GLY A 8 ? GLY A 8 . ? 1_555 ? 41 AC6 7 DCY A 10 ? DCY A 10 . ? 1_555 ? 42 AC7 6 DGL A 3 ? DGL A 3 . ? 1_555 ? 43 AC7 6 DTH A 4 ? DTH A 4 . ? 1_555 ? 44 AC7 6 DCY A 5 ? DCY A 5 . ? 1_555 ? 45 AC7 6 GLY A 8 ? GLY A 8 . ? 1_555 ? 46 AC7 6 DTH A 9 ? DTH A 9 . ? 1_555 ? 47 AC7 6 DTH A 16 ? DTH A 16 . ? 1_555 ? 48 AC8 5 DGL A 3 ? DGL A 3 . ? 1_555 ? 49 AC8 5 DTH A 4 ? DTH A 4 . ? 1_555 ? 50 AC8 5 DCY A 10 ? DCY A 10 . ? 1_555 ? 51 AC8 5 DTH A 12 ? DTH A 12 . ? 1_555 ? 52 AC8 5 DPR A 13 ? DPR A 13 . ? 1_555 ? 53 AC9 5 DCY A 1 ? DCY A 1 . ? 1_555 ? 54 AC9 5 DGL A 3 ? DGL A 3 . ? 1_555 ? 55 AC9 5 DCY A 10 ? DCY A 10 . ? 1_555 ? 56 AC9 5 DSG A 11 ? DSG A 11 . ? 1_555 ? 57 AC9 5 DPR A 13 ? DPR A 13 . ? 1_555 ? 58 BC1 4 DGL A 3 ? DGL A 3 . ? 1_555 ? 59 BC1 4 DSG A 11 ? DSG A 11 . ? 1_555 ? 60 BC1 4 DTH A 12 ? DTH A 12 . ? 1_555 ? 61 BC1 4 GLY A 14 ? GLY A 14 . ? 1_555 ? 62 BC2 6 DCY A 1 ? DCY A 1 . ? 1_555 ? 63 BC2 6 DCY A 10 ? DCY A 10 . ? 1_555 ? 64 BC2 6 DTH A 12 ? DTH A 12 . ? 1_555 ? 65 BC2 6 GLY A 14 ? GLY A 14 . ? 1_555 ? 66 BC2 6 DTH A 16 ? DTH A 16 . ? 1_555 ? 67 BC2 6 DAR A 24 ? DAR A 24 . ? 1_555 ? 68 BC3 2 DCY A 5 ? DCY A 5 . ? 1_555 ? 69 BC3 2 GLY A 14 ? GLY A 14 . ? 1_555 ? 70 BC4 6 DTH A 4 ? DTH A 4 . ? 1_555 ? 71 BC4 6 DCY A 5 ? DCY A 5 . ? 1_555 ? 72 BC4 6 DVA A 6 ? DVA A 6 . ? 1_555 ? 73 BC4 6 GLY A 8 ? GLY A 8 . ? 1_555 ? 74 BC4 6 DTH A 16 ? DTH A 16 . ? 1_555 ? 75 BC4 6 DSN A 18 ? DSN A 18 . ? 1_555 ? 76 BC5 5 DCY A 5 ? DCY A 5 . ? 1_555 ? 77 BC5 5 DTH A 16 ? DTH A 16 . ? 1_555 ? 78 BC5 5 DCY A 17 ? DCY A 17 . ? 1_555 ? 79 BC5 5 DTH A 23 ? DTH A 23 . ? 1_555 ? 80 BC5 5 GLY A 26 ? GLY A 26 . ? 1_555 ? 81 BC6 6 DTH A 4 ? DTH A 4 . ? 1_555 ? 82 BC6 6 DCY A 5 ? DCY A 5 . ? 1_555 ? 83 BC6 6 DVA A 6 ? DVA A 6 . ? 1_555 ? 84 BC6 6 DCY A 17 ? DCY A 17 . ? 1_555 ? 85 BC6 6 DSN A 18 ? DSN A 18 . ? 1_555 ? 86 BC6 6 DPR A 20 ? DPR A 20 . ? 1_555 ? 87 BC7 7 DGL A 3 ? DGL A 3 . ? 1_555 ? 88 BC7 7 DTH A 4 ? DTH A 4 . ? 1_555 ? 89 BC7 7 DCY A 5 ? DCY A 5 . ? 1_555 ? 90 BC7 7 DCY A 17 ? DCY A 17 . ? 1_555 ? 91 BC7 7 DSN A 18 ? DSN A 18 . ? 1_555 ? 92 BC7 7 DTR A 19 ? DTR A 19 . ? 1_555 ? 93 BC7 7 DVA A 21 ? DVA A 21 . ? 1_555 ? 94 BC8 8 GLY A 2 ? GLY A 2 . ? 1_555 ? 95 BC8 8 DGL A 3 ? DGL A 3 . ? 1_555 ? 96 BC8 8 DTH A 4 ? DTH A 4 . ? 1_555 ? 97 BC8 8 DCY A 5 ? DCY A 5 . ? 1_555 ? 98 BC8 8 DTH A 16 ? DTH A 16 . ? 1_555 ? 99 BC8 8 DCY A 17 ? DCY A 17 . ? 1_555 ? 100 BC8 8 DSN A 18 ? DSN A 18 . ? 1_555 ? 101 BC8 8 DPR A 20 ? DPR A 20 . ? 1_555 ? 102 BC9 8 DCY A 1 ? DCY A 1 . ? 1_555 ? 103 BC9 8 GLY A 2 ? GLY A 2 . ? 1_555 ? 104 BC9 8 DGL A 3 ? DGL A 3 . ? 1_555 ? 105 BC9 8 DCY A 5 ? DCY A 5 . ? 1_555 ? 106 BC9 8 DCY A 10 ? DCY A 10 . ? 1_555 ? 107 BC9 8 DTH A 16 ? DTH A 16 . ? 1_555 ? 108 BC9 8 DPR A 20 ? DPR A 20 . ? 1_555 ? 109 BC9 8 DVA A 21 ? DVA A 21 . ? 1_555 ? 110 CC1 8 DCY A 1 ? DCY A 1 . ? 1_555 ? 111 CC1 8 DGL A 3 ? DGL A 3 . ? 1_555 ? 112 CC1 8 DCY A 5 ? DCY A 5 . ? 1_555 ? 113 CC1 8 GLY A 14 ? GLY A 14 . ? 1_555 ? 114 CC1 8 DTH A 16 ? DTH A 16 . ? 1_555 ? 115 CC1 8 DSN A 18 ? DSN A 18 . ? 1_555 ? 116 CC1 8 DAR A 24 ? DAR A 24 . ? 1_555 ? 117 CC1 8 GLY A 26 ? GLY A 26 . ? 1_555 ? 118 CC2 6 DCY A 1 ? DCY A 1 . ? 1_555 ? 119 CC2 6 DTH A 12 ? DTH A 12 . ? 1_555 ? 120 CC2 6 GLY A 14 ? GLY A 14 . ? 1_555 ? 121 CC2 6 DCY A 15 ? DCY A 15 . ? 1_555 ? 122 CC2 6 DTH A 23 ? DTH A 23 . ? 1_555 ? 123 CC2 6 DSG A 25 ? DSG A 25 . ? 1_555 ? 124 CC3 3 GLY A 14 ? GLY A 14 . ? 1_555 ? 125 CC3 3 DTH A 23 ? DTH A 23 . ? 1_555 ? 126 CC3 3 DAR A 24 ? DAR A 24 . ? 1_555 ? 127 CC4 6 DCY A 1 ? DCY A 1 . ? 1_555 ? 128 CC4 6 DTH A 23 ? DTH A 23 . ? 1_555 ? 129 CC4 6 DAR A 24 ? DAR A 24 . ? 1_555 ? 130 CC4 6 DSG A 25 ? DSG A 25 . ? 1_555 ? 131 CC4 6 DPR A 28 ? DPR A 28 . ? 1_555 ? 132 CC4 6 DVA A 29 ? DVA A 29 . ? 1_555 ? 133 CC5 5 DCY A 1 ? DCY A 1 . ? 1_555 ? 134 CC5 5 GLY A 2 ? GLY A 2 . ? 1_555 ? 135 CC5 5 DSN A 18 ? DSN A 18 . ? 1_555 ? 136 CC5 5 DTH A 23 ? DTH A 23 . ? 1_555 ? 137 CC5 5 DAR A 24 ? DAR A 24 . ? 1_555 ? 138 CC6 5 DCY A 1 ? DCY A 1 . ? 1_555 ? 139 CC6 5 DCY A 15 ? DCY A 15 . ? 1_555 ? 140 CC6 5 DTH A 23 ? DTH A 23 . ? 1_555 ? 141 CC6 5 DAR A 24 ? DAR A 24 . ? 1_555 ? 142 CC6 5 DPR A 28 ? DPR A 28 . ? 1_555 ? # _atom_sites.entry_id 2JUE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'DTH A 4 HAS WRONG CHIRALITY AT ATOM CB' 2 'DTH A 9 HAS WRONG CHIRALITY AT ATOM CB' 3 'DTH A 12 HAS WRONG CHIRALITY AT ATOM CB' 4 'DTH A 16 HAS WRONG CHIRALITY AT ATOM CB' 5 'DTH A 23 HAS WRONG CHIRALITY AT ATOM CB' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DCY 1 1 1 DCY DCY A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 DGL 3 3 3 DGL DGL A . n A 1 4 DTH 4 4 4 DTH DTH A . n A 1 5 DCY 5 5 5 DCY DCY A . n A 1 6 DVA 6 6 6 DVA DVA A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 DTH 9 9 9 DTH DTH A . n A 1 10 DCY 10 10 10 DCY DCY A . n A 1 11 DSG 11 11 11 DSG DSG A . n A 1 12 DTH 12 12 12 DTH DTH A . n A 1 13 DPR 13 13 13 DPR DPR A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 DCY 15 15 15 DCY DCY A . n A 1 16 DTH 16 16 16 DTH DTH A . n A 1 17 DCY 17 17 17 DCY DCY A . n A 1 18 DSN 18 18 18 DSN DSN A . n A 1 19 DTR 19 19 19 DTR DTR A . n A 1 20 DPR 20 20 20 DPR DPR A . n A 1 21 DVA 21 21 21 DVA DVA A . n A 1 22 DCY 22 22 22 DCY DCY A . n A 1 23 DTH 23 23 23 DTH DTH A . n A 1 24 DAR 24 24 24 DAR DAR A . n A 1 25 DSG 25 25 25 DSG DSG A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 DLE 27 27 27 DLE DLE A . n A 1 28 DPR 28 28 28 DPR DPR A . n A 1 29 DVA 29 29 29 DVA DVA A . n # _pdbx_molecule_features.prd_id PRD_000734 _pdbx_molecule_features.name 'ALL-D KALATA B1' _pdbx_molecule_features.type 'Cyclic peptide' _pdbx_molecule_features.class 'Antimicrobial, Antitumor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000734 _pdbx_molecule.asym_id A # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2015-08-19 4 'Structure model' 2 0 2020-08-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Source and taxonomy' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' pdbx_molecule_features 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' pdbx_nmr_spectrometer 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 4 4 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 5 4 'Structure model' '_pdbx_nmr_software.name' 6 4 'Structure model' '_pdbx_nmr_spectrometer.model' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_entry_details.sequence_details ;THIS IS A CYCLIC PEPTIDE AND DVA29 CORRESPONDS TO UNP RESIDUE VAL92 ; _pdbx_entry_details.entry_id 2JUE _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_exptl_sample.component 'D-kalata B1' _pdbx_nmr_exptl_sample.concentration 1.6 _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 4 OE2 A DGL 3 ? ? HG1 A DTH 12 ? ? 1.55 2 6 OE2 A DGL 3 ? ? HG1 A DTH 12 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 DTR A 19 ? ? 21.88 -122.93 2 1 DSG A 25 ? ? -49.52 -16.92 3 2 DTR A 19 ? ? 22.13 -122.98 4 3 DTR A 19 ? ? 24.79 -125.70 5 4 DTR A 19 ? ? 21.98 -123.23 6 4 DSG A 25 ? ? -50.33 -12.50 7 4 DPR A 28 ? ? 67.01 -64.81 8 5 DTR A 19 ? ? 22.21 -123.65 9 5 DPR A 28 ? ? 68.98 -63.86 10 6 DTR A 19 ? ? 21.80 -123.12 11 7 DSN A 18 ? ? 142.42 -59.95 12 7 DTR A 19 ? ? 21.71 -122.93 13 7 DSG A 25 ? ? -52.95 -13.01 14 8 DTR A 19 ? ? 22.18 -123.46 15 9 DTR A 19 ? ? 21.62 -123.12 16 10 DTR A 19 ? ? 22.18 -123.38 17 11 DSN A 18 ? ? 150.09 -59.09 18 11 DTR A 19 ? ? 21.85 -122.61 19 11 DSG A 25 ? ? -66.96 15.50 20 12 DTR A 19 ? ? 22.14 -123.37 21 13 DTR A 19 ? ? 22.03 -123.68 22 14 DTR A 19 ? ? 22.22 -123.72 23 14 DSG A 25 ? ? -59.69 -16.14 24 15 DSN A 18 ? ? 141.99 -59.44 25 15 DTR A 19 ? ? 22.12 -123.53 26 15 DSG A 25 ? ? -54.84 -11.72 27 16 DTR A 19 ? ? 21.91 -123.50 28 16 DSG A 25 ? ? -48.50 -17.85 29 17 DTR A 19 ? ? 22.13 -123.99 30 18 DTR A 19 ? ? 22.24 -123.40 31 19 DTR A 19 ? ? 21.47 -122.76 32 20 DTR A 19 ? ? 21.33 -123.28 33 20 DPR A 28 ? ? 69.50 -64.27 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CB ? A DTH 4 ? 'WRONG HAND' . 2 1 CB ? A DTH 9 ? 'WRONG HAND' . 3 1 CB ? A DTH 12 ? 'WRONG HAND' . 4 1 CB ? A DTH 16 ? 'WRONG HAND' . 5 1 CB ? A DTH 23 ? 'WRONG HAND' . 6 2 CB ? A DTH 4 ? 'WRONG HAND' . 7 2 CB ? A DTH 9 ? 'WRONG HAND' . 8 2 CB ? A DTH 12 ? 'WRONG HAND' . 9 2 CB ? A DTH 16 ? 'WRONG HAND' . 10 2 CB ? A DTH 23 ? 'WRONG HAND' . 11 3 CB ? A DTH 4 ? 'WRONG HAND' . 12 3 CB ? A DTH 9 ? 'WRONG HAND' . 13 3 CB ? A DTH 12 ? 'WRONG HAND' . 14 3 CB ? A DTH 16 ? 'WRONG HAND' . 15 3 CB ? A DTH 23 ? 'WRONG HAND' . 16 4 CB ? A DTH 4 ? 'WRONG HAND' . 17 4 CB ? A DTH 9 ? 'WRONG HAND' . 18 4 CB ? A DTH 12 ? 'WRONG HAND' . 19 4 CB ? A DTH 16 ? 'WRONG HAND' . 20 4 CB ? A DTH 23 ? 'WRONG HAND' . 21 5 CB ? A DTH 4 ? 'WRONG HAND' . 22 5 CB ? A DTH 9 ? 'WRONG HAND' . 23 5 CB ? A DTH 12 ? 'WRONG HAND' . 24 5 CB ? A DTH 16 ? 'WRONG HAND' . 25 5 CB ? A DTH 23 ? 'WRONG HAND' . 26 6 CB ? A DTH 4 ? 'WRONG HAND' . 27 6 CB ? A DTH 9 ? 'WRONG HAND' . 28 6 CB ? A DTH 12 ? 'WRONG HAND' . 29 6 CB ? A DTH 16 ? 'WRONG HAND' . 30 6 CB ? A DTH 23 ? 'WRONG HAND' . 31 7 CB ? A DTH 4 ? 'WRONG HAND' . 32 7 CB ? A DTH 9 ? 'WRONG HAND' . 33 7 CB ? A DTH 12 ? 'WRONG HAND' . 34 7 CB ? A DTH 16 ? 'WRONG HAND' . 35 7 CB ? A DTH 23 ? 'WRONG HAND' . 36 8 CB ? A DTH 4 ? 'WRONG HAND' . 37 8 CB ? A DTH 9 ? 'WRONG HAND' . 38 8 CB ? A DTH 12 ? 'WRONG HAND' . 39 8 CB ? A DTH 16 ? 'WRONG HAND' . 40 8 CB ? A DTH 23 ? 'WRONG HAND' . 41 9 CB ? A DTH 4 ? 'WRONG HAND' . 42 9 CB ? A DTH 9 ? 'WRONG HAND' . 43 9 CB ? A DTH 12 ? 'WRONG HAND' . 44 9 CB ? A DTH 16 ? 'WRONG HAND' . 45 9 CB ? A DTH 23 ? 'WRONG HAND' . 46 10 CB ? A DTH 4 ? 'WRONG HAND' . 47 10 CB ? A DTH 9 ? 'WRONG HAND' . 48 10 CB ? A DTH 12 ? 'WRONG HAND' . 49 10 CB ? A DTH 16 ? 'WRONG HAND' . 50 10 CB ? A DTH 23 ? 'WRONG HAND' . 51 11 CB ? A DTH 4 ? 'WRONG HAND' . 52 11 CB ? A DTH 9 ? 'WRONG HAND' . 53 11 CB ? A DTH 12 ? 'WRONG HAND' . 54 11 CB ? A DTH 16 ? 'WRONG HAND' . 55 11 CB ? A DTH 23 ? 'WRONG HAND' . 56 12 CB ? A DTH 4 ? 'WRONG HAND' . 57 12 CB ? A DTH 9 ? 'WRONG HAND' . 58 12 CB ? A DTH 12 ? 'WRONG HAND' . 59 12 CB ? A DTH 16 ? 'WRONG HAND' . 60 12 CB ? A DTH 23 ? 'WRONG HAND' . 61 13 CB ? A DTH 4 ? 'WRONG HAND' . 62 13 CB ? A DTH 9 ? 'WRONG HAND' . 63 13 CB ? A DTH 12 ? 'WRONG HAND' . 64 13 CB ? A DTH 16 ? 'WRONG HAND' . 65 13 CB ? A DTH 23 ? 'WRONG HAND' . 66 14 CB ? A DTH 4 ? 'WRONG HAND' . 67 14 CB ? A DTH 9 ? 'WRONG HAND' . 68 14 CB ? A DTH 12 ? 'WRONG HAND' . 69 14 CB ? A DTH 16 ? 'WRONG HAND' . 70 14 CB ? A DTH 23 ? 'WRONG HAND' . 71 15 CB ? A DTH 4 ? 'WRONG HAND' . 72 15 CB ? A DTH 9 ? 'WRONG HAND' . 73 15 CB ? A DTH 12 ? 'WRONG HAND' . 74 15 CB ? A DTH 16 ? 'WRONG HAND' . 75 15 CB ? A DTH 23 ? 'WRONG HAND' . 76 16 CB ? A DTH 4 ? 'WRONG HAND' . 77 16 CB ? A DTH 9 ? 'WRONG HAND' . 78 16 CB ? A DTH 12 ? 'WRONG HAND' . 79 16 CB ? A DTH 16 ? 'WRONG HAND' . 80 16 CB ? A DTH 23 ? 'WRONG HAND' . 81 17 CB ? A DTH 4 ? 'WRONG HAND' . 82 17 CB ? A DTH 9 ? 'WRONG HAND' . 83 17 CB ? A DTH 12 ? 'WRONG HAND' . 84 17 CB ? A DTH 16 ? 'WRONG HAND' . 85 17 CB ? A DTH 23 ? 'WRONG HAND' . 86 18 CB ? A DTH 4 ? 'WRONG HAND' . 87 18 CB ? A DTH 9 ? 'WRONG HAND' . 88 18 CB ? A DTH 12 ? 'WRONG HAND' . 89 18 CB ? A DTH 16 ? 'WRONG HAND' . 90 18 CB ? A DTH 23 ? 'WRONG HAND' . 91 19 CB ? A DTH 4 ? 'WRONG HAND' . 92 19 CB ? A DTH 9 ? 'WRONG HAND' . 93 19 CB ? A DTH 12 ? 'WRONG HAND' . 94 19 CB ? A DTH 16 ? 'WRONG HAND' . 95 19 CB ? A DTH 23 ? 'WRONG HAND' . 96 20 CB ? A DTH 4 ? 'WRONG HAND' . 97 20 CB ? A DTH 9 ? 'WRONG HAND' . 98 20 CB ? A DTH 12 ? 'WRONG HAND' . 99 20 CB ? A DTH 16 ? 'WRONG HAND' . 100 20 CB ? A DTH 23 ? 'WRONG HAND' . #