HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-SEP-07 2JUW TITLE NMR SOLUTION STRUCTURE OF HOMODIMER PROTEIN SO_2176 FROM SHEWANELLA TITLE 2 ONEIDENSIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SOR77 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0352 PROTEIN SO_2176; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 GENE: SO_2176; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS HOMODIMER, HELIX, DIMER, ALL ALPHA, NORTHEAST STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, NESG, STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.RAMELOT,J.R.CORT,D.WANG,C.NWOSU,L.OWENS,R.XIAO,J.LIU,M.C.BARAN, AUTHOR 2 G.V.T.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 01-MAY-24 2JUW 1 REMARK REVDAT 4 19-FEB-20 2JUW 1 REMARK SEQADV REVDAT 3 13-JUL-11 2JUW 1 VERSN REVDAT 2 24-FEB-09 2JUW 1 VERSN REVDAT 1 18-SEP-07 2JUW 0 JRNL AUTH T.A.RAMELOT,J.R.CORT,G.T.MONTELIONE,M.A.KENNEDY JRNL TITL NMR SOLUTION STRUCTURE OF HOMODIMER PROTEIN SO_2176 FROM JRNL TITL 2 SHEWANELLA ONEIDENSIS. NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM TARGET SOR77. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE LINUX9, CNS 1.1 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: XPLOR-NIH REMARK 4 REMARK 4 2JUW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000100320. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 100 MM SODIUM CHLORIDE, REMARK 210 20 MM AMMONIUM ACETATE, 5 MM REMARK 210 CALCIUM CHLORIDE, 10 MM DTT, REMARK 210 0.02 % SODIUM AZIDE, 95% H2O/5% REMARK 210 D2O; 1 MM 50% NC LABELED AND 50% REMARK 210 UNLABELED PROTEIN MIXED TOGETHER REMARK 210 TO FORM MIXED HOMODIMER PROTEIN, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 AMMONIUM ACETATE, 5 MM CALCIUM REMARK 210 CHLORIDE, 10 MM DTT, 0.02 % REMARK 210 SODIUM AZIDE, 95% H2O/5% D2O; 1 REMARK 210 MM [U-5% 13C; U-100% 15N] REMARK 210 PROTEIN, 100 MM SODIUM CHLORIDE, REMARK 210 20 MM AMMONIUM ACETATE, 5 MM REMARK 210 CALCIUM CHLORIDE, 10 MM DTT, REMARK 210 0.02 % SODIUM AZIDE, 95% H2O/5% REMARK 210 D2O; 1 MM [U-100% 13C; U-100% REMARK 210 15N] PROTEIN, 100 MM SODIUM REMARK 210 CHLORIDE, 20 MM AMMONIUM ACETATE, REMARK 210 5 MM CALCIUM CHLORIDE, 10 MM REMARK 210 DTT, 0.02 % SODIUM AZIDE, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 4D 1H-13C NOESY; 3D HNCO; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D H(CCO) REMARK 210 NH; 3D C(CO)NH; 3D HBHA(CO)NH; REMARK 210 3D HCCH-COSY; 3D CCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, AUTOSTRUCTURE 2.1.1, REMARK 210 X-PLOR NIH 2.15.0, SPARKY 3.1, REMARK 210 PSVS 1.3, AUTOASSIGN 2.3.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 25 OE1 GLU B 18 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 27 49.63 35.42 REMARK 500 1 GLU A 74 -68.10 68.18 REMARK 500 1 HIS A 75 72.75 37.46 REMARK 500 1 HIS A 76 -4.08 72.57 REMARK 500 1 HIS A 78 -86.69 -136.61 REMARK 500 1 HIS A 79 -32.54 177.00 REMARK 500 1 LYS B 27 73.33 53.83 REMARK 500 1 ARG B 47 -67.53 -99.42 REMARK 500 1 HIS B 78 88.38 -163.69 REMARK 500 2 TYR A 7 -178.16 75.22 REMARK 500 2 LEU A 73 -63.60 -101.06 REMARK 500 2 HIS A 79 -49.30 172.04 REMARK 500 2 TYR B 7 -149.02 59.02 REMARK 500 2 HIS B 77 132.75 69.50 REMARK 500 2 HIS B 79 -35.29 -136.90 REMARK 500 3 LYS A 6 -19.97 73.73 REMARK 500 3 ARG A 47 -65.69 -106.92 REMARK 500 3 LYS B 6 91.77 -64.32 REMARK 500 3 TYR B 7 -170.93 156.14 REMARK 500 3 GLU B 74 160.48 70.19 REMARK 500 3 HIS B 75 -153.16 -101.07 REMARK 500 3 HIS B 76 -168.34 65.75 REMARK 500 4 GLN A 4 -163.00 61.13 REMARK 500 4 LYS A 6 -48.89 76.28 REMARK 500 4 GLU A 74 -149.58 60.57 REMARK 500 4 HIS A 75 -24.64 78.08 REMARK 500 4 GLN B 4 -78.11 65.68 REMARK 500 5 ALA A 2 147.87 68.64 REMARK 500 5 SER A 5 -175.30 63.14 REMARK 500 5 LYS A 6 -60.51 -143.16 REMARK 500 5 SER A 8 -169.49 -100.07 REMARK 500 5 LYS A 27 -53.21 78.41 REMARK 500 5 ALA A 28 86.61 47.50 REMARK 500 5 ARG A 47 -67.28 -102.99 REMARK 500 5 HIS A 75 -57.63 -178.02 REMARK 500 5 ILE B 3 -71.25 67.28 REMARK 500 5 LYS B 48 -30.61 -130.51 REMARK 500 5 HIS B 78 58.64 -106.22 REMARK 500 6 ALA A 2 -82.56 -108.13 REMARK 500 6 ILE A 3 93.13 56.26 REMARK 500 6 SER A 5 23.39 49.08 REMARK 500 6 LYS A 6 -58.64 69.94 REMARK 500 6 ARG A 47 -62.51 -107.43 REMARK 500 6 GLU A 74 34.47 -83.22 REMARK 500 6 HIS A 76 -40.45 76.74 REMARK 500 6 HIS A 79 -38.39 -179.37 REMARK 500 6 GLN B 4 79.22 -103.43 REMARK 500 6 HIS B 76 -24.51 173.32 REMARK 500 7 HIS A 77 125.63 75.13 REMARK 500 7 TYR B 7 -159.49 69.81 REMARK 500 REMARK 500 THIS ENTRY HAS 146 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15456 RELATED DB: BMRB REMARK 900 RELATED ID: SOR77 RELATED DB: TARGETDB DBREF 2JUW A 1 72 UNP Q8EF26 Y2176_SHEON 1 72 DBREF 2JUW B 1 72 UNP Q8EF26 Y2176_SHEON 1 72 SEQADV 2JUW LEU A 73 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW GLU A 74 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 75 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 76 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 77 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 78 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 79 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS A 80 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW LEU B 73 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW GLU B 74 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 75 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 76 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 77 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 78 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 79 UNP Q8EF26 EXPRESSION TAG SEQADV 2JUW HIS B 80 UNP Q8EF26 EXPRESSION TAG SEQRES 1 A 80 MET ALA ILE GLN SER LYS TYR SER ASN THR GLN VAL GLU SEQRES 2 A 80 SER LEU ILE ALA GLU ILE LEU VAL VAL LEU GLU LYS HIS SEQRES 3 A 80 LYS ALA PRO THR ASP LEU SER LEU MET ALA LEU GLY ASN SEQRES 4 A 80 CYS VAL THR HIS LEU LEU GLU ARG LYS VAL PRO SER GLU SEQRES 5 A 80 SER ARG GLN ALA VAL ALA GLU GLN PHE ALA LYS ALA LEU SEQRES 6 A 80 ALA GLN SER VAL LYS SER ASN LEU GLU HIS HIS HIS HIS SEQRES 7 A 80 HIS HIS SEQRES 1 B 80 MET ALA ILE GLN SER LYS TYR SER ASN THR GLN VAL GLU SEQRES 2 B 80 SER LEU ILE ALA GLU ILE LEU VAL VAL LEU GLU LYS HIS SEQRES 3 B 80 LYS ALA PRO THR ASP LEU SER LEU MET ALA LEU GLY ASN SEQRES 4 B 80 CYS VAL THR HIS LEU LEU GLU ARG LYS VAL PRO SER GLU SEQRES 5 B 80 SER ARG GLN ALA VAL ALA GLU GLN PHE ALA LYS ALA LEU SEQRES 6 B 80 ALA GLN SER VAL LYS SER ASN LEU GLU HIS HIS HIS HIS SEQRES 7 B 80 HIS HIS HELIX 1 1 SER A 8 HIS A 26 1 19 HELIX 2 2 PRO A 29 LYS A 48 1 20 HELIX 3 3 PRO A 50 GLU A 74 1 25 HELIX 4 4 HIS A 75 HIS A 78 5 4 HELIX 5 5 SER B 8 LYS B 27 1 20 HELIX 6 6 PRO B 29 VAL B 49 1 21 HELIX 7 7 PRO B 50 GLU B 74 1 25 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1