HEADER IMMUNE SYSTEM 09-OCT-07 2JWD TITLE PROTEIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: B DOMAIN; COMPND 5 SYNONYM: IGG-BINDING PROTEIN A, STAPHYLOCOCCAL PROTEIN A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS PROTEIN A, POLY GLUTAMINE, CELL WALL, IGG-BINDING PROTEIN, KEYWDS 2 PEPTIDOGLYCAN-ANCHOR, SECRETED, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 29 AUTHOR A.ROBERTSON,J.HORNE,M.J.SCANLON,S.P.BOTTOMLEY REVDAT 3 10-NOV-21 2JWD 1 REMARK SEQADV REVDAT 2 24-FEB-09 2JWD 1 VERSN REVDAT 1 21-OCT-08 2JWD 0 JRNL AUTH A.ROBERTSON,J.HORNE,B.THOMAS,A.M.ELLISDON,M.J.SCANLON, JRNL AUTH 2 S.P.BOTTOMLEY JRNL TITL POLYGLUTAMINE LENGTH-DEPENDENT MIDFOLDING IS CONFINED TO THE JRNL TITL 2 POLY-Q REGION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, X-PLOR NIH 2.11 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: LONG, SLOW-COOLING ANNEALING PROTOCOL REMARK 3 WITH FINAL POWELL MINIMISATION STEP. RAMACHANDRAN POTENTIAL REMARK 3 INCLUDED IN XPLOR-NIH. REMARK 4 REMARK 4 2JWD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000100373. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM SODIUM ACETATE, 100MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H NOESY; REMARK 210 3D HNCACB; 3D HNCO; 3D HN(CO)CA; REMARK 210 3D H(CCO)NH; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1, X-PLOR NIH 2.11, REMARK 210 SPARKY 3.112 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 29 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 20 89.16 -36.64 REMARK 500 1 ALA A 57 63.58 39.59 REMARK 500 2 LEU A 20 85.99 -32.63 REMARK 500 3 LEU A 20 88.73 -36.24 REMARK 500 4 LEU A 20 88.05 -35.68 REMARK 500 4 ALA A 57 59.74 34.13 REMARK 500 5 VAL A 2 79.90 35.18 REMARK 500 5 LEU A 20 87.69 -33.22 REMARK 500 6 LEU A 20 86.59 -33.96 REMARK 500 7 LEU A 20 88.72 -35.57 REMARK 500 8 LEU A 20 89.30 -36.39 REMARK 500 9 LYS A 5 -7.86 57.16 REMARK 500 9 LEU A 20 88.84 -35.45 REMARK 500 10 LEU A 20 90.78 -36.67 REMARK 500 10 ALA A 57 174.31 52.24 REMARK 500 11 LEU A 20 87.01 -33.82 REMARK 500 12 LEU A 20 89.97 -37.23 REMARK 500 12 ALA A 57 135.14 55.32 REMARK 500 13 LEU A 20 88.24 -34.98 REMARK 500 14 LEU A 20 89.05 -35.26 REMARK 500 15 LEU A 20 86.00 -32.35 REMARK 500 16 LEU A 20 89.26 -36.01 REMARK 500 17 LEU A 20 86.02 -33.39 REMARK 500 18 LEU A 20 88.71 -35.43 REMARK 500 19 LEU A 20 85.43 -33.18 REMARK 500 20 VAL A 2 90.78 38.42 REMARK 500 20 LEU A 20 88.97 -37.28 REMARK 500 21 ASN A 7 -102.87 15.99 REMARK 500 21 LEU A 20 88.31 -35.42 REMARK 500 22 LEU A 20 86.52 -34.41 REMARK 500 23 LEU A 20 88.39 -34.79 REMARK 500 24 LEU A 20 90.08 -36.86 REMARK 500 25 LEU A 20 87.85 -36.02 REMARK 500 26 LEU A 20 87.31 -34.04 REMARK 500 27 LEU A 20 89.17 -35.47 REMARK 500 28 LEU A 20 89.20 -36.11 REMARK 500 29 LEU A 20 88.07 -35.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 2JWD A 3 59 UNP P38507 SPA2_STAAU 213 269 SEQADV 2JWD ASP A 1 UNP P38507 EXPRESSION TAG SEQADV 2JWD VAL A 2 UNP P38507 EXPRESSION TAG SEQADV 2JWD TRP A 15 UNP P38507 TYR 225 ENGINEERED MUTATION SEQRES 1 A 59 ASP VAL ASP ASN LYS PHE ASN LYS GLU GLN GLN ASN ALA SEQRES 2 A 59 PHE TRP GLU ILE LEU HIS LEU PRO ASN LEU ASN GLU GLU SEQRES 3 A 59 GLN ARG ASN GLY PHE ILE GLN SER LEU LYS ASP ASP PRO SEQRES 4 A 59 SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU SEQRES 5 A 59 ASN ASP ALA GLN ALA PRO LYS HELIX 1 1 ASN A 7 LEU A 20 1 14 HELIX 2 2 ASN A 24 ASP A 38 1 15 HELIX 3 3 GLN A 41 ALA A 57 1 17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1