HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-DEC-07 2JYA TITLE NMR SOLUTION STRUCTURE OF PROTEIN ATU1810 FROM AGROBACTERIUM TITLE 2 TUMEFACIENS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ATR23, TITLE 3 ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS TARGET ATC1776 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN ATU1810; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AGR_C_3324P; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS STR.; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58; SOURCE 5 ATCC: 33970; SOURCE 6 GENE: ATU1810, AGR_C_3324; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS PROTEIN WITH UNKNOWN FUNCTION ATU1810, ONTARIO CENTRE FOR STRUCTURAL KEYWDS 2 PROTEOMICS, OCSP, ATC1776, ATR23, STRUCTURAL GENOMICS, UNKNOWN KEYWDS 3 FUNCTION, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL KEYWDS 4 GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,A.YEE,A.GUTMANAS,C.FARES,M.KARRA,A.SEMESI,C.H.ARROWSMITH, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG),ONTARIO CENTRE FOR AUTHOR 3 STRUCTURAL PROTEOMICS (OCSP) REVDAT 6 01-MAY-24 2JYA 1 REMARK SEQADV REVDAT 5 13-JUL-11 2JYA 1 VERSN REVDAT 4 24-FEB-09 2JYA 1 VERSN REVDAT 3 12-AUG-08 2JYA 1 AUTHOR KEYWDS REVDAT 2 05-AUG-08 2JYA 1 AUTHOR KEYWDS REVDAT 1 25-DEC-07 2JYA 0 JRNL AUTH A.LEMAK,A.YEE,A.GUTMANAS,C.FARES,M.KARRA,A.SEMESI, JRNL AUTH 2 C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF PROTEIN ATU1810 FORM AGROBACTERIUM JRNL TITL 2 TUMEFACIENS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1, CNS 1.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JYA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000100441. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] ATU1810, REMARK 210 10 MM TRIS, 300 MM SODIUM REMARK 210 CHLORIDE, 0.1 % SODIUM AZIDE, 10 REMARK 210 MM BENZAMIDINE, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-13C; U-15N] ATU1810, REMARK 210 10 MM TRIS, 300 MM SODIUM REMARK 210 CHLORIDE, 0.1 % SODIUM AZIDE, 10 REMARK 210 MM BENZAMIDINE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 HNCO; 3D HNCA; 3D H(CCO)NH; 3D REMARK 210 (H)C(CCO)NH; 3D HCCH-TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 2D 1H-15N HSQC(IPAP); REMARK 210 3D TROSY-HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, TALOS, NMRPIPE REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 THR A 81 REMARK 465 ARG A 82 REMARK 465 LYS A 83 REMARK 465 VAL A 84 REMARK 465 VAL A 85 REMARK 465 SER A 86 REMARK 465 TYR A 87 REMARK 465 THR A 88 REMARK 465 ASP A 89 REMARK 465 ASN A 90 REMARK 465 PHE A 91 REMARK 465 ARG A 92 REMARK 465 PHE A 93 REMARK 465 ASN A 94 REMARK 465 ARG A 95 REMARK 465 THR A 96 REMARK 465 GLN A 97 REMARK 465 PRO A 98 REMARK 465 TRP A 99 REMARK 465 THR A 100 REMARK 465 HIS A 101 REMARK 465 GLY A 102 REMARK 465 SER A 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 12 96.54 -68.03 REMARK 500 1 GLN A 14 87.93 56.73 REMARK 500 1 LYS A 19 -72.08 -93.68 REMARK 500 1 ASN A 21 92.21 -66.97 REMARK 500 1 ASP A 28 86.84 -61.42 REMARK 500 1 PRO A 32 -163.57 -70.97 REMARK 500 1 ARG A 33 98.03 -61.06 REMARK 500 1 SER A 45 93.91 -165.36 REMARK 500 1 LYS A 78 30.44 -78.21 REMARK 500 1 GLU A 79 6.21 -159.23 REMARK 500 2 PRO A 8 97.38 -59.59 REMARK 500 2 GLN A 14 82.71 -68.04 REMARK 500 2 ALA A 18 32.10 -155.90 REMARK 500 2 PRO A 32 -164.74 -76.79 REMARK 500 2 SER A 44 82.14 67.09 REMARK 500 3 PRO A 8 -158.50 -91.32 REMARK 500 3 THR A 11 94.51 -61.20 REMARK 500 3 MET A 13 87.23 -67.09 REMARK 500 3 ALA A 18 11.81 -169.32 REMARK 500 3 GLU A 30 48.02 -80.50 REMARK 500 3 PRO A 32 -148.52 -82.82 REMARK 500 3 LYS A 48 86.46 -172.49 REMARK 500 4 ALA A 12 -160.37 -162.44 REMARK 500 4 GLN A 14 59.87 -117.25 REMARK 500 4 GLU A 30 31.26 -91.21 REMARK 500 4 PRO A 32 -154.82 -78.69 REMARK 500 4 TYR A 41 100.85 -58.98 REMARK 500 4 THR A 42 -22.23 68.22 REMARK 500 4 SER A 45 35.03 -87.64 REMARK 500 4 LYS A 48 110.34 70.43 REMARK 500 4 GLU A 79 -9.97 -142.26 REMARK 500 5 THR A 11 -79.48 -67.41 REMARK 500 5 ALA A 12 -64.60 177.11 REMARK 500 5 SER A 15 -75.34 -93.83 REMARK 500 5 LYS A 19 -64.70 -91.40 REMARK 500 5 PRO A 32 171.26 -54.49 REMARK 500 5 GLN A 50 90.83 -66.82 REMARK 500 6 SER A 15 -31.21 82.45 REMARK 500 6 THR A 17 44.16 -92.11 REMARK 500 6 LYS A 19 -32.94 78.69 REMARK 500 6 PRO A 77 -165.82 -79.66 REMARK 500 6 GLU A 79 -63.56 -147.17 REMARK 500 7 THR A 17 19.22 -154.85 REMARK 500 7 LYS A 19 -65.63 -91.63 REMARK 500 7 ASP A 28 94.15 -61.76 REMARK 500 7 PRO A 32 -149.97 -85.26 REMARK 500 7 SER A 44 -82.69 -173.71 REMARK 500 7 LYS A 48 90.61 -54.35 REMARK 500 8 ALA A 12 -155.21 -87.64 REMARK 500 8 THR A 17 -162.27 -163.68 REMARK 500 REMARK 500 THIS ENTRY HAS 123 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 20 ARG A 7 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: ATR23 RELATED DB: TARGETDB DBREF 2JYA A 1 101 UNP Q8UEE9 Q8UEE9_AGRT5 1 101 SEQADV 2JYA GLN A -2 UNP Q8UEE9 EXPRESSION TAG SEQADV 2JYA GLY A -1 UNP Q8UEE9 EXPRESSION TAG SEQADV 2JYA HIS A 0 UNP Q8UEE9 EXPRESSION TAG SEQADV 2JYA GLY A 102 UNP Q8UEE9 EXPRESSION TAG SEQADV 2JYA SER A 103 UNP Q8UEE9 EXPRESSION TAG SEQRES 1 A 106 GLN GLY HIS MET SER ALA LYS ILE TYR ARG PRO ALA LYS SEQRES 2 A 106 THR ALA MET GLN SER GLY THR ALA LYS THR ASN VAL TRP SEQRES 3 A 106 VAL LEU GLU PHE ASP ALA GLU VAL PRO ARG LYS ILE ASP SEQRES 4 A 106 PRO ILE MET GLY TYR THR SER SER SER ASP MET LYS GLN SEQRES 5 A 106 GLN VAL LYS LEU THR PHE GLU THR GLN GLU GLN ALA GLU SEQRES 6 A 106 ALA TYR ALA GLN ARG LYS GLY ILE GLU TYR ARG VAL ILE SEQRES 7 A 106 LEU PRO LYS GLU ALA THR ARG LYS VAL VAL SER TYR THR SEQRES 8 A 106 ASP ASN PHE ARG PHE ASN ARG THR GLN PRO TRP THR HIS SEQRES 9 A 106 GLY SER HELIX 1 1 THR A 57 GLY A 69 1 13 SHEET 1 A 4 LYS A 48 PHE A 55 0 SHEET 2 A 4 TRP A 23 GLU A 30 -1 N LEU A 25 O LEU A 53 SHEET 3 A 4 SER A 2 TYR A 6 -1 N LYS A 4 O GLU A 26 SHEET 4 A 4 GLU A 71 VAL A 74 1 O ARG A 73 N ALA A 3 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1