HEADER    CYTOKINE                                19-DEC-07   2JYV              
TITLE     HUMAN GRANULIN F                                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: GRANULIN-2;                                                
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: GRANULIN F;                                                 
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: GRN;                                                           
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI(DE3);                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET-32                                    
KEYWDS    GRANULIN C, EPITHELIN, HUMAN, STACK OF HAIRPINS, ALTERNATIVE          
KEYWDS   2 SPLICING, CYTOKINE, GLYCOPROTEIN, POLYMORPHISM, SECRETED             
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    D.TOLKATCHEV,P.WANG,Z.CHEN,P.XU,F.NI                                  
REVDAT   4   09-OCT-24 2JYV    1       REMARK                                   
REVDAT   3   16-MAR-22 2JYV    1       REMARK SEQADV                            
REVDAT   2   24-FEB-09 2JYV    1       VERSN                                    
REVDAT   1   22-APR-08 2JYV    0                                                
JRNL        AUTH   D.TOLKATCHEV,S.MALIK,A.VINOGRADOVA,P.WANG,Z.CHEN,P.XU,       
JRNL        AUTH 2 H.P.BENNETT,A.BATEMAN,F.NI                                   
JRNL        TITL   STRUCTURE DISSECTION OF HUMAN PROGRANULIN IDENTIFIES         
JRNL        TITL 2 WELL-FOLDED GRANULIN/EPITHELIN MODULES WITH UNIQUE           
JRNL        TITL 3 FUNCTIONAL ACTIVITIES.                                       
JRNL        REF    PROTEIN SCI.                  V.  17   711 2008              
JRNL        REFN                   ISSN 0961-8368                               
JRNL        PMID   18359860                                                     
JRNL        DOI    10.1110/PS.073295308                                         
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : ARIA 1.0, ARIA 1.0                                   
REMARK   3   AUTHORS     : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE,          
REMARK   3                 O'DONOGHUE AND NILGES (ARIA)                         
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2JYV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-08.                  
REMARK 100 THE DEPOSITION ID IS D_1000100462.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298; 288                           
REMARK 210  PH                             : 6.8; 6.8                           
REMARK 210  IONIC STRENGTH                 : NULL; NULL                         
REMARK 210  PRESSURE                       : AMBIENT ATM; AMBIENT ATM           
REMARK 210  SAMPLE CONTENTS                : 10 MM SODIUM PHOSPHATE, 150 MM     
REMARK 210                                   SODIUM CHLORIDE, 0.2 MM EDTA,      
REMARK 210                                   0.5-1.0 MM [U-100% 15N] HGRNF,     
REMARK 210                                   90% H2O/10% D2O; 10 MM SODIUM      
REMARK 210                                   PHOSPHATE, 150 MM SODIUM           
REMARK 210                                   CHLORIDE, 0.2 MM EDTA, 0.5-1.0     
REMARK 210                                   MM [U-100% 15N] HGRNF, 100% D2O    
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-1H TOCSY;    
REMARK 210                                   2D 1H-1H NOESY; IN-PHASE COSY      
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 500 MHZ                   
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRVIEW, NMRPIPE, SYBYL, INSIGHT   
REMARK 210                                   II, MOLMOL                         
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 60                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-10                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     ALA A    -1                                                      
REMARK 465     MET A     0                                                      
REMARK 465     ALA A    33                                                      
REMARK 465     SER A    34                                                      
REMARK 465     CYS A    35                                                      
REMARK 465     CYS A    36                                                      
REMARK 465     GLU A    37                                                      
REMARK 465     ASP A    38                                                      
REMARK 465     ARG A    39                                                      
REMARK 465     VAL A    40                                                      
REMARK 465     HIS A    41                                                      
REMARK 465     CYS A    42                                                      
REMARK 465     CYS A    43                                                      
REMARK 465     PRO A    44                                                      
REMARK 465     HIS A    45                                                      
REMARK 465     GLY A    46                                                      
REMARK 465     ALA A    47                                                      
REMARK 465     PHE A    48                                                      
REMARK 465     CYS A    49                                                      
REMARK 465     ASP A    50                                                      
REMARK 465     LEU A    51                                                      
REMARK 465     VAL A    52                                                      
REMARK 465     HIS A    53                                                      
REMARK 465     THR A    54                                                      
REMARK 465     ARG A    55                                                      
REMARK 465     CYS A    56                                                      
REMARK 465     ILE A    57                                                      
REMARK 465     LYS A    58                                                      
REMARK 465     LEU A    59                                                      
REMARK 465     ALA A    60                                                      
REMARK 465     ALA A    61                                                      
REMARK 465     ALA A    62                                                      
REMARK 465     LEU A    63                                                      
REMARK 465     GLU A    64                                                      
REMARK 465     HIS A    65                                                      
REMARK 465     HIS A    66                                                      
REMARK 465     HIS A    67                                                      
REMARK 465     HIS A    68                                                      
REMARK 465     HIS A    69                                                      
REMARK 465     HIS A    70                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 CYS A   4      119.30   -164.66                                   
REMARK 500  2 ASP A   6     -156.27    -97.14                                   
REMARK 500  2 SER A   7     -174.97     59.09                                   
REMARK 500  2 PRO A  31      100.90    -53.11                                   
REMARK 500  3 PRO A   5      -70.05    -44.93                                   
REMARK 500  4 ASP A   6     -158.18   -121.06                                   
REMARK 500  4 SER A   7      175.56     60.87                                   
REMARK 500  4 ASP A  13     -162.98     56.48                                   
REMARK 500  5 ASP A  13     -148.49     56.91                                   
REMARK 500  5 PHE A  14       58.11   -105.37                                   
REMARK 500  6 PRO A   5       29.63    -77.41                                   
REMARK 500  6 ASP A  13       37.47    -76.10                                   
REMARK 500  6 PHE A  14       -1.03   -140.81                                   
REMARK 500  7 ASP A   6     -164.27     57.67                                   
REMARK 500  7 SER A   7     -164.44     55.27                                   
REMARK 500  7 GLN A   8      -34.38   -135.62                                   
REMARK 500  8 ASP A   6     -162.90     58.53                                   
REMARK 500  8 SER A   7      164.67     62.95                                   
REMARK 500  8 ASP A  13      -85.71   -171.45                                   
REMARK 500  8 PHE A  14        5.86   -166.59                                   
REMARK 500  8 PRO A  31      108.27    -50.93                                   
REMARK 500  9 ASP A   6      -84.99    -79.05                                   
REMARK 500  9 GLN A   8       52.16   -111.53                                   
REMARK 500  9 ASP A  13     -166.99     57.71                                   
REMARK 500  9 PRO A  31     -159.15    -73.09                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1QGM   RELATED DB: PDB                                   
REMARK 900 CARP GRANULIN-1 FRAGMENT                                             
REMARK 900 RELATED ID: 1G26   RELATED DB: PDB                                   
REMARK 900 HUMAN GRANULIN A FRAGMENT                                            
REMARK 900 RELATED ID: 1FWO   RELATED DB: PDB                                   
REMARK 900 ORYZAIN BETA FRAGMENT                                                
REMARK 900 RELATED ID: 2JYT   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 2JYU   RELATED DB: PDB                                   
DBREF  2JYV A    1    57  UNP    P28799   GRN_HUMAN      123    179             
SEQADV 2JYV ALA A   -1  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV MET A    0  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV LYS A   58  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV LEU A   59  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV ALA A   60  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV ALA A   61  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV ALA A   62  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV LEU A   63  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV GLU A   64  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   65  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   66  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   67  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   68  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   69  UNP  P28799              EXPRESSION TAG                 
SEQADV 2JYV HIS A   70  UNP  P28799              EXPRESSION TAG                 
SEQRES   1 A   72  ALA MET ALA ILE GLN CYS PRO ASP SER GLN PHE GLU CYS          
SEQRES   2 A   72  PRO ASP PHE SER THR CYS CYS VAL MET VAL ASP GLY SER          
SEQRES   3 A   72  TRP GLY CYS CYS PRO MET PRO GLN ALA SER CYS CYS GLU          
SEQRES   4 A   72  ASP ARG VAL HIS CYS CYS PRO HIS GLY ALA PHE CYS ASP          
SEQRES   5 A   72  LEU VAL HIS THR ARG CYS ILE LYS LEU ALA ALA ALA LEU          
SEQRES   6 A   72  GLU HIS HIS HIS HIS HIS HIS                                  
SHEET    1   A 2 SER A  15  VAL A  19  0                                        
SHEET    2   A 2 TRP A  25  PRO A  29 -1  O  GLY A  26   N  CYS A  18           
SSBOND   1 CYS A    4    CYS A   17                          1555   1555  2.03  
SSBOND   2 CYS A   11    CYS A   27                          1555   1555  2.03  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1